View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16780_low_9 (Length: 499)

Name: NF16780_low_9
Description: NF16780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16780_low_9
NF16780_low_9
[»] chr8 (45 HSPs)
chr8 (13-482)||(38874536-38875005)
chr8 (308-450)||(12361113-12361256)
chr8 (311-433)||(10114429-10114550)
chr8 (308-433)||(28769345-28769470)
chr8 (311-379)||(27028824-27028892)
chr8 (350-440)||(4558730-4558820)
chr8 (350-431)||(1470904-1470985)
chr8 (311-395)||(8062501-8062585)
chr8 (352-431)||(31705025-31705105)
chr8 (310-366)||(35220731-35220787)
chr8 (354-433)||(787158-787237)
chr8 (311-370)||(43717946-43718005)
chr8 (216-338)||(7008633-7008753)
chr8 (350-432)||(31884534-31884616)
chr8 (350-408)||(34770856-34770914)
chr8 (342-448)||(35869761-35869867)
chr8 (311-407)||(2482830-2482924)
chr8 (350-407)||(6509351-6509408)
chr8 (308-433)||(11795031-11795156)
chr8 (378-451)||(14949809-14949882)
chr8 (353-442)||(42597331-42597420)
chr8 (346-390)||(7514560-7514604)
chr8 (308-395)||(30013195-30013282)
chr8 (311-370)||(30251463-30251522)
chr8 (350-433)||(41620339-41620422)
chr8 (350-392)||(9834837-9834879)
chr8 (154-200)||(14926893-14926939)
chr8 (304-362)||(21653091-21653149)
chr8 (357-407)||(29262929-29262979)
chr8 (162-200)||(42215219-42215257)
chr8 (344-405)||(6864501-6864562)
chr8 (351-396)||(7645954-7645999)
chr8 (156-201)||(9700113-9700158)
chr8 (320-385)||(9956832-9956897)
chr8 (320-405)||(11376670-11376755)
chr8 (311-428)||(31862437-31862554)
chr8 (350-431)||(34080314-34080395)
chr8 (313-366)||(44236834-44236887)
chr8 (280-376)||(6966881-6966976)
chr8 (398-442)||(11188251-11188295)
chr8 (358-450)||(29699176-29699268)
chr8 (217-261)||(31884856-31884900)
chr8 (152-188)||(34769427-34769463)
chr8 (350-449)||(35298525-35298625)
chr8 (152-200)||(35534522-35534570)
[»] chr5 (58 HSPs)
chr5 (311-433)||(39105403-39105525)
chr5 (232-433)||(32172592-32172792)
chr5 (311-433)||(9202757-9202879)
chr5 (355-448)||(32059642-32059734)
chr5 (327-408)||(12425535-12425616)
chr5 (304-432)||(36796708-36796836)
chr5 (311-370)||(4014433-4014492)
chr5 (283-408)||(10272413-10272537)
chr5 (350-419)||(14295459-14295528)
chr5 (349-442)||(18704083-18704175)
chr5 (350-433)||(26209461-26209543)
chr5 (312-425)||(37588370-37588483)
chr5 (317-385)||(28776980-28777048)
chr5 (349-442)||(35135713-35135802)
chr5 (348-427)||(9703286-9703365)
chr5 (350-433)||(38047903-38047986)
chr5 (311-385)||(2568645-2568719)
chr5 (325-391)||(7319387-7319453)
chr5 (325-395)||(35553211-35553281)
chr5 (280-366)||(41052874-41052959)
chr5 (311-376)||(7984965-7985030)
chr5 (156-201)||(9174928-9174973)
chr5 (344-393)||(12975326-12975375)
chr5 (312-425)||(37526209-37526322)
chr5 (312-432)||(37690646-37690767)
chr5 (311-391)||(1619071-1619150)
chr5 (311-379)||(41981874-41981942)
chr5 (311-390)||(6587116-6587195)
chr5 (219-338)||(11297114-11297232)
chr5 (351-422)||(12595789-12595860)
chr5 (350-433)||(16889674-16889757)
chr5 (168-215)||(31723903-31723950)
chr5 (220-275)||(36326104-36326159)
chr5 (308-391)||(41957457-41957540)
chr5 (171-201)||(1899265-1899295)
chr5 (336-378)||(4620187-4620229)
chr5 (308-366)||(7319014-7319072)
chr5 (220-258)||(9174929-9174967)
chr5 (311-365)||(10639960-10640014)
chr5 (347-433)||(15402874-15402960)
chr5 (320-370)||(24030419-24030469)
chr5 (372-426)||(32969187-32969241)
chr5 (150-188)||(34736434-34736472)
chr5 (156-201)||(8651265-8651310)
chr5 (233-318)||(11457152-11457236)
chr5 (218-259)||(16937800-16937841)
chr5 (350-395)||(34205216-34205261)
chr5 (314-379)||(40119880-40119945)
chr5 (347-408)||(40120084-40120145)
chr5 (355-448)||(6738458-6738553)
chr5 (217-261)||(6938649-6938693)
chr5 (156-200)||(7705911-7705955)
chr5 (349-393)||(19138766-19138810)
chr5 (331-379)||(32942611-32942659)
chr5 (399-471)||(36638647-36638719)
chr5 (300-431)||(40205072-40205201)
chr5 (344-408)||(41277392-41277456)
chr5 (302-370)||(42582914-42582982)
[»] chr7 (57 HSPs)
chr7 (311-408)||(40688995-40689092)
chr7 (325-451)||(27548184-27548310)
chr7 (256-434)||(48157075-48157252)
chr7 (296-392)||(38010694-38010790)
chr7 (315-391)||(47177617-47177693)
chr7 (320-407)||(12110325-12110412)
chr7 (311-433)||(28165030-28165152)
chr7 (314-440)||(39505889-39506014)
chr7 (313-370)||(20526448-20526505)
chr7 (311-385)||(47510116-47510190)
chr7 (321-385)||(6263382-6263446)
chr7 (327-395)||(44821936-44822004)
chr7 (356-448)||(49060464-49060556)
chr7 (350-449)||(991993-992092)
chr7 (351-434)||(1417202-1417285)
chr7 (218-261)||(24363517-24363560)
chr7 (311-370)||(48470046-48470105)
chr7 (328-442)||(27481320-27481434)
chr7 (350-408)||(28340892-28340950)
chr7 (350-419)||(21453247-21453316)
chr7 (320-408)||(46825062-46825151)
chr7 (308-432)||(7623078-7623202)
chr7 (154-214)||(23214954-23215014)
chr7 (328-408)||(30456476-30456556)
chr7 (352-408)||(31002725-31002781)
chr7 (415-471)||(38713202-38713258)
chr7 (312-379)||(752962-753029)
chr7 (350-449)||(22759109-22759208)
chr7 (344-395)||(24909641-24909692)
chr7 (346-433)||(34441028-34441115)
chr7 (327-370)||(43648242-43648285)
chr7 (320-379)||(45790443-45790502)
chr7 (350-405)||(47046156-47046211)
chr7 (308-370)||(6601369-6601431)
chr7 (312-370)||(33128755-33128813)
chr7 (374-428)||(39591539-39591593)
chr7 (351-449)||(47004010-47004108)
chr7 (351-432)||(5006558-5006639)
chr7 (350-395)||(5369739-5369784)
chr7 (349-434)||(23918895-23918980)
chr7 (327-376)||(33678776-33678825)
chr7 (155-200)||(34083520-34083565)
chr7 (349-394)||(39518807-39518852)
chr7 (314-379)||(46280284-46280349)
chr7 (282-395)||(46609074-46609186)
chr7 (400-448)||(2223072-2223120)
chr7 (162-198)||(5010390-5010426)
chr7 (378-434)||(8680930-8680986)
chr7 (415-471)||(25507252-25507308)
chr7 (313-385)||(30535550-30535622)
chr7 (223-263)||(32410648-32410688)
chr7 (365-433)||(35536046-35536114)
chr7 (311-363)||(36517588-36517640)
chr7 (320-408)||(37064482-37064570)
chr7 (156-188)||(40371567-40371599)
chr7 (162-198)||(40598404-40598440)
chr7 (330-370)||(47559629-47559669)
[»] chr2 (77 HSPs)
chr2 (220-448)||(11513825-11514047)
chr2 (311-391)||(18066109-18066189)
chr2 (296-392)||(22681179-22681275)
chr2 (350-448)||(10143096-10143194)
chr2 (233-385)||(15377752-15377903)
chr2 (308-385)||(18179246-18179323)
chr2 (354-433)||(2416252-2416331)
chr2 (329-391)||(8017415-8017477)
chr2 (324-429)||(41875675-41875780)
chr2 (308-408)||(6993730-6993830)
chr2 (398-470)||(10150657-10150729)
chr2 (351-395)||(29643465-29643509)
chr2 (320-408)||(42457912-42458000)
chr2 (153-200)||(2416426-2416473)
chr2 (350-433)||(17952749-17952832)
chr2 (354-445)||(35755554-35755645)
chr2 (314-408)||(12464485-12464579)
chr2 (217-275)||(15370239-15370297)
chr2 (219-333)||(32821848-32821961)
chr2 (311-421)||(36043855-36043965)
chr2 (327-428)||(656802-656903)
chr2 (375-448)||(3423841-3423914)
chr2 (324-377)||(6167305-6167358)
chr2 (354-431)||(23143030-23143107)
chr2 (354-431)||(23554820-23554897)
chr2 (350-391)||(25800810-25800851)
chr2 (312-385)||(39983329-39983402)
chr2 (312-408)||(9395094-9395190)
chr2 (318-370)||(26143656-26143708)
chr2 (311-391)||(26626854-26626934)
chr2 (311-407)||(28039341-28039437)
chr2 (311-391)||(29316784-29316864)
chr2 (216-264)||(33503105-33503153)
chr2 (311-379)||(40279190-40279258)
chr2 (320-391)||(680484-680555)
chr2 (311-366)||(3611232-3611287)
chr2 (309-407)||(7103489-7103588)
chr2 (311-370)||(9174817-9174876)
chr2 (162-197)||(9395245-9395280)
chr2 (232-275)||(14302918-14302961)
chr2 (344-379)||(33931612-33931647)
chr2 (353-408)||(42592303-42592358)
chr2 (320-379)||(42621393-42621452)
chr2 (350-408)||(5043608-5043666)
chr2 (154-188)||(6772444-6772478)
chr2 (350-448)||(9478223-9478321)
chr2 (219-261)||(10285970-10286012)
chr2 (312-366)||(33319822-33319876)
chr2 (154-200)||(35378443-35378489)
chr2 (162-200)||(37448696-37448734)
chr2 (308-370)||(40279409-40279471)
chr2 (350-408)||(43141835-43141893)
chr2 (311-376)||(1893290-1893355)
chr2 (308-428)||(1939338-1939458)
chr2 (327-408)||(10646314-10646395)
chr2 (328-393)||(13869121-13869186)
chr2 (344-385)||(16353848-16353889)
chr2 (313-370)||(16398116-16398173)
chr2 (350-431)||(28933765-28933846)
chr2 (362-419)||(31740019-31740076)
chr2 (317-433)||(34339845-34339961)
chr2 (282-363)||(34652017-34652097)
chr2 (311-368)||(35378541-35378598)
chr2 (327-440)||(36863650-36863762)
chr2 (320-449)||(42817394-42817523)
chr2 (311-379)||(750664-750731)
chr2 (309-385)||(938517-938593)
chr2 (311-419)||(1493522-1493630)
chr2 (311-391)||(1625881-1625961)
chr2 (161-201)||(3458707-3458747)
chr2 (350-442)||(3673737-3673829)
chr2 (350-426)||(6988061-6988137)
chr2 (354-430)||(39567845-39567921)
chr2 (378-450)||(40672872-40672944)
chr2 (217-261)||(40759270-40759314)
chr2 (217-257)||(42868397-42868437)
chr2 (350-430)||(43199356-43199436)
[»] chr3 (63 HSPs)
chr3 (233-366)||(37273140-37273272)
chr3 (311-441)||(36783343-36783474)
chr3 (216-363)||(45541580-45541726)
chr3 (350-448)||(38462205-38462303)
chr3 (355-432)||(1395611-1395688)
chr3 (220-393)||(2923457-2923629)
chr3 (311-428)||(32095200-32095317)
chr3 (219-295)||(25459548-25459624)
chr3 (297-365)||(33972729-33972797)
chr3 (348-439)||(37788794-37788884)
chr3 (312-379)||(44747418-44747485)
chr3 (315-378)||(50600191-50600254)
chr3 (313-363)||(466202-466252)
chr3 (342-408)||(2201092-2201158)
chr3 (325-407)||(14145877-14145959)
chr3 (345-471)||(24235726-24235852)
chr3 (308-377)||(2719463-2719532)
chr3 (217-358)||(4534291-4534431)
chr3 (314-391)||(21367648-21367725)
chr3 (332-385)||(33405197-33405250)
chr3 (309-429)||(34254815-34254936)
chr3 (398-471)||(41159010-41159083)
chr3 (352-449)||(43116478-43116575)
chr3 (217-258)||(51929854-51929895)
chr3 (302-429)||(21862175-21862303)
chr3 (311-391)||(52618984-52619064)
chr3 (327-390)||(5436241-5436304)
chr3 (308-363)||(16790384-16790439)
chr3 (355-426)||(23952159-23952230)
chr3 (346-413)||(37689428-37689495)
chr3 (350-449)||(40122801-40122899)
chr3 (220-370)||(41633362-41633509)
chr3 (300-370)||(2128256-2128326)
chr3 (353-427)||(10101527-10101601)
chr3 (353-427)||(10212452-10212526)
chr3 (349-407)||(23315591-23315649)
chr3 (350-428)||(24887331-24887409)
chr3 (311-377)||(28622008-28622074)
chr3 (327-369)||(32582747-32582789)
chr3 (351-433)||(48364928-48365010)
chr3 (158-200)||(50760704-50760746)
chr3 (163-200)||(584159-584196)
chr3 (162-191)||(9832674-9832703)
chr3 (320-385)||(14548739-14548804)
chr3 (344-385)||(21865563-21865604)
chr3 (309-385)||(25182994-25183071)
chr3 (314-379)||(30443886-30443951)
chr3 (328-408)||(46886718-46886796)
chr3 (164-201)||(48364834-48364871)
chr3 (164-201)||(48807811-48807848)
chr3 (217-258)||(53762310-53762351)
chr3 (309-365)||(901931-901987)
chr3 (220-296)||(3775770-3775846)
chr3 (372-471)||(4534425-4534525)
chr3 (374-434)||(4990629-4990689)
chr3 (350-390)||(20874352-20874392)
chr3 (311-379)||(20880469-20880537)
chr3 (350-394)||(21872319-21872363)
chr3 (356-448)||(22214735-22214827)
chr3 (327-379)||(39602235-39602287)
chr3 (156-188)||(43046789-43046821)
chr3 (210-274)||(43948751-43948815)
chr3 (157-201)||(51929853-51929897)
[»] chr1 (77 HSPs)
chr1 (308-425)||(4622040-4622157)
chr1 (308-449)||(44032005-44032146)
chr1 (351-430)||(49517012-49517091)
chr1 (349-434)||(48830123-48830208)
chr1 (311-404)||(9656618-9656711)
chr1 (311-379)||(7137007-7137075)
chr1 (304-408)||(7218076-7218180)
chr1 (233-408)||(31517672-31517846)
chr1 (311-408)||(16322813-16322910)
chr1 (320-408)||(23544657-23544746)
chr1 (311-384)||(28482242-28482315)
chr1 (308-413)||(30371107-30371212)
chr1 (311-408)||(51695504-51695600)
chr1 (311-427)||(10199417-10199533)
chr1 (350-442)||(17269180-17269272)
chr1 (311-379)||(27820346-27820414)
chr1 (311-379)||(34290229-34290297)
chr1 (310-370)||(35179141-35179201)
chr1 (311-379)||(45975683-45975751)
chr1 (218-385)||(6231733-6231899)
chr1 (344-395)||(25006076-25006127)
chr1 (349-395)||(15361690-15361736)
chr1 (350-408)||(27738228-27738286)
chr1 (351-413)||(28467356-28467418)
chr1 (162-200)||(42556525-42556563)
chr1 (325-370)||(4576807-4576852)
chr1 (350-411)||(33204436-33204497)
chr1 (313-370)||(39603842-39603899)
chr1 (315-408)||(49888731-49888824)
chr1 (312-440)||(4200161-4200289)
chr1 (311-395)||(6292470-6292554)
chr1 (220-275)||(12763419-12763475)
chr1 (367-439)||(15360827-15360899)
chr1 (311-407)||(24915060-24915156)
chr1 (320-428)||(25479525-25479633)
chr1 (308-384)||(27963376-27963452)
chr1 (308-385)||(28689458-28689537)
chr1 (320-380)||(38867849-38867909)
chr1 (361-421)||(49365818-49365878)
chr1 (400-471)||(4202227-4202298)
chr1 (153-200)||(11695975-11696021)
chr1 (313-384)||(25944420-25944491)
chr1 (354-433)||(33527199-33527278)
chr1 (320-363)||(38189773-38189816)
chr1 (308-383)||(39270431-39270506)
chr1 (350-408)||(1255479-1255537)
chr1 (308-378)||(2294905-2294975)
chr1 (222-296)||(4549462-4549536)
chr1 (350-408)||(5421968-5422026)
chr1 (313-367)||(16144981-16145035)
chr1 (313-395)||(25005808-25005890)
chr1 (160-198)||(28467548-28467586)
chr1 (346-440)||(32958584-32958678)
chr1 (217-259)||(37631475-37631517)
chr1 (312-366)||(41195203-41195257)
chr1 (323-408)||(1432479-1432564)
chr1 (222-379)||(2777885-2778040)
chr1 (351-408)||(5592734-5592791)
chr1 (311-384)||(6774976-6775048)
chr1 (320-433)||(7472251-7472363)
chr1 (314-363)||(7941615-7941664)
chr1 (164-201)||(24279861-24279898)
chr1 (314-391)||(26630444-26630521)
chr1 (320-381)||(27887136-27887197)
chr1 (350-471)||(47002922-47003043)
chr1 (164-200)||(1662686-1662722)
chr1 (308-452)||(3224343-3224487)
chr1 (320-408)||(4548685-4548773)
chr1 (349-405)||(10581124-10581180)
chr1 (308-428)||(11211062-11211182)
chr1 (219-259)||(11695974-11696014)
chr1 (308-448)||(16981942-16982082)
chr1 (217-385)||(17420190-17420356)
chr1 (357-433)||(29007771-29007847)
chr1 (168-200)||(29723602-29723634)
chr1 (311-379)||(42174848-42174916)
chr1 (325-385)||(44422686-44422746)
[»] chr4 (62 HSPs)
chr4 (312-433)||(6364088-6364209)
chr4 (320-408)||(42685388-42685476)
chr4 (308-407)||(2996538-2996637)
chr4 (221-408)||(23459592-23459777)
chr4 (310-418)||(11802488-11802596)
chr4 (311-379)||(17822874-17822942)
chr4 (350-429)||(49219082-49219161)
chr4 (233-366)||(28615529-28615662)
chr4 (354-442)||(8130104-8130192)
chr4 (312-391)||(20031730-20031810)
chr4 (351-463)||(30207620-30207731)
chr4 (320-408)||(51630075-51630163)
chr4 (335-419)||(53626729-53626813)
chr4 (323-378)||(942129-942184)
chr4 (296-385)||(9841053-9841141)
chr4 (320-379)||(16199999-16200058)
chr4 (346-433)||(24160929-24161016)
chr4 (221-408)||(44319913-44320099)
chr4 (156-199)||(44638139-44638182)
chr4 (350-452)||(23819010-23819111)
chr4 (342-448)||(24443962-24444068)
chr4 (307-433)||(27043835-27043961)
chr4 (321-419)||(52735075-52735173)
chr4 (350-419)||(4071835-4071904)
chr4 (328-433)||(26883934-26884039)
chr4 (372-449)||(30024623-30024700)
chr4 (313-370)||(55302251-55302308)
chr4 (320-364)||(825508-825552)
chr4 (350-434)||(35958593-35958677)
chr4 (325-408)||(437455-437538)
chr4 (311-390)||(1706604-1706683)
chr4 (153-188)||(10205851-10205886)
chr4 (220-263)||(22796763-22796806)
chr4 (233-288)||(25487489-25487544)
chr4 (353-428)||(36460530-36460605)
chr4 (308-391)||(40174544-40174627)
chr4 (348-391)||(52754581-52754624)
chr4 (219-338)||(53315360-53315478)
chr4 (350-408)||(3175915-3175973)
chr4 (325-391)||(29778776-29778842)
chr4 (308-433)||(30338597-30338723)
chr4 (327-385)||(35571656-35571714)
chr4 (355-433)||(45128363-45128441)
chr4 (350-408)||(54325085-54325143)
chr4 (220-261)||(10172172-10172213)
chr4 (354-395)||(24091440-24091481)
chr4 (352-469)||(24160545-24160662)
chr4 (329-390)||(32421087-32421148)
chr4 (171-200)||(34430626-34430655)
chr4 (312-385)||(36048520-36048593)
chr4 (325-370)||(52315220-52315265)
chr4 (372-429)||(54327519-54327576)
chr4 (320-432)||(3155543-3155655)
chr4 (222-258)||(3637299-3637335)
chr4 (328-408)||(9760404-9760484)
chr4 (351-407)||(13949893-13949949)
chr4 (311-419)||(17884021-17884129)
chr4 (375-471)||(19422319-19422415)
chr4 (344-408)||(30581719-30581783)
chr4 (219-259)||(35571549-35571589)
chr4 (320-408)||(47118983-47119071)
chr4 (327-379)||(49202638-49202690)
[»] chr6 (52 HSPs)
chr6 (308-428)||(4246354-4246474)
chr6 (220-442)||(7148597-7148817)
chr6 (311-433)||(24476541-24476663)
chr6 (350-471)||(281896-282021)
chr6 (219-470)||(8010259-8010509)
chr6 (349-433)||(29274276-29274360)
chr6 (308-471)||(4006615-4006778)
chr6 (354-448)||(22742290-22742384)
chr6 (320-433)||(9093574-9093687)
chr6 (302-419)||(24782012-24782129)
chr6 (350-442)||(32975908-32976000)
chr6 (375-442)||(24836272-24836339)
chr6 (350-469)||(27889892-27890010)
chr6 (311-413)||(2735028-2735130)
chr6 (220-448)||(8420115-8420343)
chr6 (156-193)||(29249513-29249550)
chr6 (214-287)||(31461756-31461829)
chr6 (344-448)||(2206514-2206618)
chr6 (320-408)||(31671092-31671180)
chr6 (216-259)||(103542-103585)
chr6 (356-395)||(5550109-5550148)
chr6 (344-435)||(33787787-33787878)
chr6 (311-370)||(34430470-34430529)
chr6 (320-370)||(835267-835317)
chr6 (351-413)||(2027455-2027517)
chr6 (233-363)||(2455819-2455948)
chr6 (350-448)||(2727904-2728002)
chr6 (279-408)||(4420609-4420735)
chr6 (343-409)||(9604812-9604878)
chr6 (354-408)||(14492266-14492320)
chr6 (364-406)||(27615335-27615377)
chr6 (357-407)||(27693494-27693544)
chr6 (311-377)||(31624085-31624151)
chr6 (319-408)||(837233-837322)
chr6 (350-419)||(1402949-1403018)
chr6 (320-408)||(7785762-7785848)
chr6 (308-413)||(9667991-9668096)
chr6 (350-443)||(20671913-20672006)
chr6 (300-333)||(27924601-27924634)
chr6 (300-377)||(28641747-28641824)
chr6 (219-259)||(835179-835219)
chr6 (311-379)||(3201956-3202024)
chr6 (164-200)||(5977042-5977078)
chr6 (327-379)||(9109276-9109328)
chr6 (313-433)||(9559553-9559672)
chr6 (217-261)||(12111077-12111121)
chr6 (168-200)||(12111080-12111112)
chr6 (350-390)||(24838791-24838831)
chr6 (315-379)||(24982698-24982762)
chr6 (372-408)||(27713471-27713507)
chr6 (168-200)||(31338090-31338122)
chr6 (311-359)||(31813174-31813222)
[»] scaffold0024 (2 HSPs)
scaffold0024 (345-433)||(27515-27603)
scaffold0024 (321-370)||(21304-21353)
[»] scaffold0100 (1 HSPs)
scaffold0100 (349-451)||(42538-42639)
[»] scaffold0221 (1 HSPs)
scaffold0221 (313-370)||(22233-22290)
[»] scaffold0349 (1 HSPs)
scaffold0349 (372-408)||(18437-18473)


Alignment Details
Target: chr8 (Bit Score: 450; Significance: 0; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 13 - 482
Target Start/End: Complemental strand, 38875005 - 38874536
Alignment:
Q  13 agaacctgtgaacgaacaatagctgattctgctccaacaatttctgcaaaagcctggtcgagagcttcacgccccccagcttcatcatgaccataaccag 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  38875005 agaacctgtgaacgaacaatagctgattctgctccaacaatttctgcaaaagcctggtcaagagcttcacgccccccagtttcatcatgaccataaccag 38874906  T
Q  113 tgcaaccaccaaagtgctgacagcattaacaaaataaccaattagggcatgtttagattgacttatttgagcttatttactagcataaagaccaatgaga 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38874905 tgcaaccaccaaagtgctgacagcattaacaaaataaccaattagggcatgtttagattgacttatttgagcttatttactagcataaagaccaatgaga 38874806  T
Q  213 ctaagcctgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtcca 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38874805 ctaagcctgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtcca 38874706  T
Q  313 taagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagtt 412  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38874705 taagctatttttagcttattttcatatgttctccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagtt 38874606  T
Q  413 acagaaacaacttatacataaaaacttatacgataaatgcataattaagttgtttatcccagaaataaat 482  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  38874605 acagaaacaacttatacataaacacttatacgataaatgcataattaagttgtatatcccagaaataaat 38874536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 308 - 450
Target Start/End: Complemental strand, 12361256 - 12361113
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    ||||||||||| |||| | ||||||| |||  | | |||  |||| ||||||||||||||||| |||||||||||||| |||||||||  ||||||||||    
T  12361256 gtccataagctgttttcaacttatttccattagctctcctgaataacttatgaaaacagcttatagcttatatgaaaacaatttgacttcattttatctt 12361157  T
Q  408 tagttacagaaacaacttatacataaaaactt-atacgataaat 450  Q
    || ||| ||||| |||||||| ||||  |||| |||||||||||    
T  12361156 tatttatagaaataacttatatataagtacttcatacgataaat 12361113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 10114550 - 10114429
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttag 410  Q
    |||| ||| |||| |||||||||||||||||| ||||| |||||| |||||||||||||| ||||||||  |||| ||||  |||  ||||||||||| |    
T  10114550 catatgctgttttcagcttattttcatatgttctccaatatagctaatgaaaacagcttatagcttataccaaaacaattcaact-tattttatcttttg 10114452  T
Q  411 ttacagaaacaacttatacataa 433  Q
     || ||||| | |||||||||||    
T  10114451 ctatagaaatagcttatacataa 10114429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 433
Target Start/End: Original strand, 28769345 - 28769470
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    ||||||||| | |||| ||||||||| ||||   | ||||||||||||||||||||||||||| |||||||| ||||| | |||||||  |||||||  |    
T  28769345 gtccataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttataagaaaatagtttgacttaattttatagt 28769444  T
Q  408 tagttacagaaacaacttatacataa 433  Q
    | |||| || || | |||||||||||    
T  28769445 ttgttataggaatagcttatacataa 28769470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 27028892 - 27028824
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    ||||||||||||| |||||||||||||| | | ||||| ||||||||||||||||||||| ||| ||||    
T  27028892 cataagctattttcagcttattttcataagctctccaagatagcttatgaaaacagcttatagcatata 27028824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 440
Target Start/End: Complemental strand, 4558820 - 4558730
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaactta 440  Q
    |||||||||| |||||||||| ||| |||||||||| ||||| |||  |||||||||||  ||| ||||| | |||||||||||| |||||    
T  4558820 atagcttatggaaacagcttatagcatatatgaaaataatttaactttattttatcttttattatagaaatagcttatacataaacactta 4558730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 431
Target Start/End: Original strand, 1470904 - 1470985
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacat 431  Q
    |||| |||||||||||||||| |||||||||||||  |||||||||  |||||||||||  ||| ||||| | |||||||||    
T  1470904 ataggttatgaaaacagcttatagcttatatgaaagtaatttgactttattttatcttttattatagaaatagcttatacat 1470985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 395
Target Start/End: Complemental strand, 8062585 - 8062501
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgact 395  Q
    ||||||||||||  ||||||||||||||   | || || ||||||||||| |||| |||| |||||||||||||| |||||||||    
T  8062585 cataagctatttccagcttattttcataaactctctaagatagcttatgagaacatcttatagcttatatgaaaacaatttgact 8062501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 431
Target Start/End: Complemental strand, 31705105 - 31705025
Alignment:
Q  352 agcttatgaaaacagcttagagcttatatgaaaag-aatttgactcgattttatctttagttacagaaacaacttatacat 431  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||  ||||||||||||   |||||||| | |||||||||    
T  31705105 agcttatgaaaacagcttatagcttatatgaaacgtaatttgacatgattttatcttttagtacagaaatagcttatacat 31705025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 366
Target Start/End: Original strand, 35220731 - 35220787
Alignment:
Q  310 ccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacag 366  Q
    ||||||||||||||||||||||||| ||| | | |||| ||||||||||||||||||    
T  35220731 ccataagctatttttagcttatttttataagctctccagaatagcttatgaaaacag 35220787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 354 - 433
Target Start/End: Original strand, 787158 - 787237
Alignment:
Q  354 cttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataa 433  Q
    ||||||||||||| ||| ||||||||||| || |||||||||  ||||||||||  ||||| |||||| |||| ||||||    
T  787158 cttatgaaaacagtttatagcttatatgataacaatttgactttattttatcttatgttacggaaacagcttaaacataa 787237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 43717946 - 43718005
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    |||||||| ||||||||||| ||||||| ||| ||||| |||||||||| ||||||||||    
T  43717946 cataagctgtttttagcttactttcataagttctccaagatagcttatgcaaacagctta 43718005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 338
Target Start/End: Complemental strand, 7008753 - 7008633
Alignment:
Q  216 agcctgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataa 315  Q
    |||||||||| ||||  ||||||||| ||||||| | ||||||||| | || |||| |||    ||||||||||||||||| | ||| ||| |||| |||    
T  7008753 agcctgtttgaattgacttatttgagtttatctactggcataagcacttgtgagac-gttagagagagcttatagaaacaacc-tatgacatgtccttaa 7008656  T
Q  316 gctatttttagcttattttcata 338  Q
    | |||||||||||||||||||||    
T  7008655 gatatttttagcttattttcata 7008633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 432
Target Start/End: Complemental strand, 31884616 - 31884534
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacata 432  Q
    ||||||||||||||||  ||| |||||||||||||| ||||  | | |||||||| ||| |||| ||||| ||||||||||||    
T  31884616 atagcttatgaaaacaatttatagcttatatgaaaacaattcaatttgattttatattttgttatagaaataacttatacata 31884534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 408
Target Start/End: Complemental strand, 34770914 - 34770856
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||||||||||||||| |||| |||||| ||||||| |||||||||  |||||||||||    
T  34770914 atagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatcttt 34770856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 448
Target Start/End: Complemental strand, 35869867 - 35869761
Alignment:
Q  342 tatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttat 441  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||   ||||| |  ||||||| ||| |||  |||||   ||||||||||| |||||||    
T  35869867 tatccacaatagcttatgaaaacaacttatagcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttat 35869768  T
Q  442 acgataa 448  Q
    | |||||    
T  35869767 atgataa 35869761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 407
Target Start/End: Complemental strand, 2482924 - 2482830
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    |||||||| |||| |||||||||  ||| ||||||||| |||||  |||||||||||||| ||||||||  |||| | |||||||  ||||||||||    
T  2482924 cataagctgttttcagcttatttctataagttatccaagatagc--atgaaaacagcttatagcttatacaaaaacattttgactttattttatctt 2482830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 407
Target Start/End: Original strand, 6509351 - 6509408
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    ||||||||||||||||||||| ||||||||| || | |||||||||  ||||||||||    
T  6509351 atagcttatgaaaacagcttatagcttatataaatacaatttgactttattttatctt 6509408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 433
Target Start/End: Complemental strand, 11795156 - 11795031
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    |||||||| || |||| ||||||||| |||| | | |||| |||||||||||||| ||||||| | |||||||||||| | | |||||  ||| ||| ||    
T  11795156 gtccataacctgttttcagcttatttccataagctctccataatagcttatgaaatcagcttataacttatatgaaaacagtgtgactttattgtatgtt 11795057  T
Q  408 tagttacagaaacaacttatacataa 433  Q
    | || | ||||| | |||||||||||    
T  11795056 ttgtcatagaaaaagcttatacataa 11795031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 451
Target Start/End: Complemental strand, 14949882 - 14949809
Alignment:
Q  378 tatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataaatg 451  Q
    |||||||||| |||||||| ||||||||||| |||| ||||  | ||||||||||| ||||| || ||||||||    
T  14949882 tatgaaaagagtttgactctattttatcttttgttatagaagtagcttatacataagaacttgtatgataaatg 14949809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 442
Target Start/End: Complemental strand, 42597420 - 42597331
Alignment:
Q  353 gcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttata 442  Q
    ||||||||||||| |||| |||||  ||||||| ||||| |||  ||||||||||| |||| ||||| | |||||||||||  |||||||    
T  42597420 gcttatgaaaacaacttatagcttgcatgaaaacaattttactttattttatcttttgttatagaaatagcttatacataagtacttata 42597331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 390
Target Start/End: Complemental strand, 7514604 - 7514560
Alignment:
Q  346 caaaatagcttatgaaaacagcttagagcttatatgaaaagaatt 390  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||    
T  7514604 caaaatagcttatgaaaacagcttgtagcttatatgaaaacaatt 7514560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 395
Target Start/End: Complemental strand, 30013282 - 30013195
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgact 395  Q
    |||| ||| ||||||| ||||||||| |||  ||| | ||  ||||||||||||||||||||| |||||||||| ||| | |||||||    
T  30013282 gtccctaaactattttcagcttatttccattagttctacaggatagcttatgaaaacagcttatagcttatatggaaacagtttgact 30013195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 30251463 - 30251522
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    |||||||| |||  |||||||||||||| ||  ||||| |||||||||||||||||||||    
T  30251463 cataagctttttacagcttattttcataagtggtccaagatagcttatgaaaacagctta 30251522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 433
Target Start/End: Original strand, 41620339 - 41620422
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataa 433  Q
    ||||||||| ||||||||||  ||  |||||||| | |||||||||  ||||||||||| |||||| ||| |||||||| ||||    
T  41620339 atagcttataaaaacagcttttagaatatatgaacataatttgactttattttatcttttgttacaaaaataacttatatataa 41620422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 392
Target Start/End: Original strand, 9834837 - 9834879
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttg 392  Q
    |||||||||||||||| |||| |||||||||||||| ||||||    
T  9834837 atagcttatgaaaacaacttatagcttatatgaaaacaatttg 9834879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 14926893 - 14926939
Alignment:
Q  154 ttagggcatgtttagattgacttatttgagcttatttactagcataa 200  Q
    ||||||| ||||| ||||||||||||||| |||||||||| ||||||    
T  14926893 ttagggcttgtttggattgacttatttgaacttatttactggcataa 14926939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 21653149 - 21653091
Alignment:
Q  304 acacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaa 362  Q
    |||||| ||||||||||||| |||||||||||||| | | ||||| |||||| ||||||    
T  21653149 acacgttcataagctattttcagcttattttcataagctctccaagatagctaatgaaa 21653091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 407
Target Start/End: Original strand, 29262929 - 29262979
Alignment:
Q  357 atgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    |||||| ||||||| |||||||||||||| |||||||||  ||||||||||    
T  29262929 atgaaatcagcttacagcttatatgaaaataatttgactttattttatctt 29262979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 42215219 - 42215257
Alignment:
Q  162 tgtttagattgacttatttgagcttatttactagcataa 200  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  42215219 tgtttagattaacttatttgagcttatttactggcataa 42215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 405
Target Start/End: Original strand, 6864501 - 6864562
Alignment:
Q  344 tccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatc 405  Q
    |||||||||||||||||||||| |||| | |||| ||||||| | |||||||  ||||||||    
T  6864501 tccaaaatagcttatgaaaacaacttataacttacatgaaaatagtttgactttattttatc 6864562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 7645999 - 7645954
Alignment:
Q  351 tagcttatgaaaacagcttagagcttatatgaaaagaatttgactc 396  Q
    ||||||||||||||| |||| |||||| ||||||| ||||||||||    
T  7645999 tagcttatgaaaacaacttatagcttacatgaaaacaatttgactc 7645954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 9700158 - 9700113
Alignment:
Q  156 agggcatgtttagattgacttatttgagcttatttactagcataaa 201  Q
    ||||| ||||| |||| |||||||||||||||| ||||||||||||    
T  9700158 agggcctgtttggattaacttatttgagcttatctactagcataaa 9700113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 385
Target Start/End: Original strand, 9956832 - 9956897
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    |||| |||||||||||||| ||| ||||| |||| ||||||||||| |||| | |||||| |||||    
T  9956832 ttttcagcttattttcataagttctccaagatagattatgaaaacaacttataacttataggaaaa 9956897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 405
Target Start/End: Complemental strand, 11376755 - 11376670
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatc 405  Q
    |||| ||||||||||||||  || || ||||||||||| |||| || |||| ||||||||| |||| |||| ||||  ||||||||    
T  11376755 ttttcagcttattttcatagattctctaaaatagcttaagaaagcatcttatagcttatatcaaaataattagactttattttatc 11376670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 428
Target Start/End: Complemental strand, 31862554 - 31862437
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttag 410  Q
    |||||||| |||| |||||||||||||| | | || |  ||| |||||||||||| |||| |||||||| || || | |||||||  || |||||||| |    
T  31862554 cataagctgttttcagcttattttcataagctctctaggataacttatgaaaacatcttatagcttatacgagaatagtttgactttatattatcttttg 31862455  T
Q  411 ttacagaaacaacttata 428  Q
    |||  |||| ||||||||    
T  31862454 ttattgaaataacttata 31862437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 431
Target Start/End: Original strand, 34080314 - 34080395
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacat 431  Q
    ||||| ||||||||||||||| |||||||| |  || | |||||||  ||||||||||| |||| ||||| | |||||||||    
T  34080314 atagcgtatgaaaacagcttatagcttatacggtaacagtttgacttcattttatcttttgttaaagaaatagcttatacat 34080395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 44236834 - 44236887
Alignment:
Q  313 taagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacag 366  Q
    |||| |||||| |||||||||||||| | | ||||| |||||||||||||||||    
T  44236834 taagttattttcagcttattttcataagctctccaatatagcttatgaaaacag 44236887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 6966976 - 6966881
Alignment:
Q  280 agagcttatagaaacaaacatataacacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagctt 376  Q
    ||||||||| ||||||| | ||||||| |||  |||||||||||  ||||||||||||| | |  |||| || ||| |||||||||||||| |||||    
T  6966976 agagcttattgaaacaa-cttataacatgtcattaagctattttccgcttattttcataagctccccaagatggctaatgaaaacagcttatagctt 6966881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 442
Target Start/End: Original strand, 11188251 - 11188295
Alignment:
Q  398 attttatctttagttacagaaacaacttatacataaaaacttata 442  Q
    ||||||||||| |||| |||||||||||||||||||  |||||||    
T  11188251 attttatcttttgttatagaaacaacttatacataagcacttata 11188295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 450
Target Start/End: Complemental strand, 29699268 - 29699176
Alignment:
Q  358 tgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataaat 450  Q
    ||||||||||||| | |||| |||| || | |||||||  ||||||||||| |||| ||||| ||||| |||||||  | ||||| |||||||    
T  29699268 tgaaaacagcttataacttagatgacaacattttgactttattttatcttttgttatagaaataacttgtacataagcatttatatgataaat 29699176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 31884856 - 31884900
Alignment:
Q  217 gcctgtttggattgttttatttgagcttatctattagcataagca 261  Q
    ||||| ||||||||  ||||||||||||||||| |||||||||||    
T  31884856 gcctgcttggattgcgttatttgagcttatctactagcataagca 31884900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 34769427 - 34769463
Alignment:
Q  152 aattagggcatgtttagattgacttatttgagcttat 188  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  34769427 aattagggcatgtttggattgacatatttgagcttat 34769463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 449
Target Start/End: Original strand, 35298525 - 35298625
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatat-gaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataa 448  Q
    |||||||||||||||| |||| || |||||| |||||   |||| ||  ||||||||||| ||||| |||| | |||||||||||  ||||||| |||||    
T  35298525 atagcttatgaaaacaacttatagtttatattgaaaactgtttggctttattttatcttttgttactgaaatagcttatacataagcacttatatgataa 35298624  T
Q  449 a 449  Q
    |    
T  35298625 a 35298625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 35534522 - 35534570
Alignment:
Q  152 aattagggcatgtttagattgacttatttgagcttatttactagcataa 200  Q
    |||| |||| |||||||| |||||||||||||||||| ||||| |||||    
T  35534522 aattggggcctgtttagaatgacttatttgagcttatctactaacataa 35534570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 9e-25; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 39105525 - 39105403
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttag 410  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||| ||| |||||||| ||||| ||||| |||  |||| || |||||    
T  39105525 cataagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaaacaatttaacttcatttcatatttag 39105426  T
Q  411 ttacagaaacaacttatacataa 433  Q
     || ||||| | |||||||||||    
T  39105425 ctatagaaatagcttatacataa 39105403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 232 - 433
Target Start/End: Complemental strand, 32172792 - 32172592
Alignment:
Q  232 tttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagctatttttagcttat 331  Q
    ||||||||||||||| || ||||||||||| | || |||  |||  | ||||||||| ||||||| | ||| ||| |||||||||| ||||| |||||||    
T  32172792 tttatttgagcttatatactagcataagcacttgtgagatagtttgggagagcttatggaaacaa-cttatgacatgtccataagccattttcagcttat 32172694  T
Q  332 tttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacat 431  Q
    || |||  ||| | ||  ||||||||||||||||||||| |||||||||| ||| || ||||||  ||||||||||| |||  ||||| |  ||||||||    
T  32172693 ttccattagttcttcatgatagcttatgaaaacagcttatagcttatatgtaaacaacttgacttcattttatcttttgttgtagaaatagtttatacat 32172594  T
Q  432 aa 433  Q
    ||    
T  32172593 aa 32172592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 9202757 - 9202879
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttag 410  Q
    |||||||| |||  |||||||||||||| ||| | ||| ||| |||||||||||||||||  ||||||||||||| ||||| |||  ||||||||||| |    
T  9202757 cataagctgtttccagcttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatcttttg 9202856  T
Q  411 ttacagaaacaacttatacataa 433  Q
     |||||||| | |||||| ||||    
T  9202857 ctacagaaatagcttatatataa 9202879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 355 - 448
Target Start/End: Original strand, 32059642 - 32059734
Alignment:
Q  355 ttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataa 448  Q
    |||||||||||||||| |||||||||||||| | |||||||  |||||||| ||||||||| ||||| |||||||||||  ||||||| |||||    
T  32059642 ttatgaaaacagcttatagcttatatgaaaacagtttgactttattttatc-ttagttacaaaaacagcttatacataagcacttatatgataa 32059734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 12425616 - 12425535
Alignment:
Q  327 cttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||||||||||| ||| ||||| ||||||| ||||||||||||| |||||||| ||||| ||||| |||  |||||||||||    
T  12425616 cttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttt 12425535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 304 - 432
Target Start/End: Original strand, 36796708 - 36796836
Alignment:
Q  304 acacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgatttta 403  Q
    |||||| |||||||| |||| || |||||||  || ||| ||||| |||||  |||||||||||||| ||||||| |||||| ||||| ||   ||||||    
T  36796708 acacgttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaaacagcttatagcttatgtgaaaataatttaaccttatttta 36796807  T
Q  404 tctttagttacagaaacaacttatacata 432  Q
    | ||| ||| |||||| ||||||||||||    
T  36796808 ttttttgttgcagaaataacttatacata 36796836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 4014433 - 4014492
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    |||||||| |||| |||||||||||||| ||| ||||| |||||||||||||||||||||    
T  4014433 cataagctgttttcagcttattttcataagttctccaagatagcttatgaaaacagctta 4014492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 408
Target Start/End: Original strand, 10272413 - 10272537
Alignment:
Q  283 gcttatagaaacaaacatataacacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatga 382  Q
    |||||||||||||| | ||| ||| |||  |||| | |||| ||||||||||||||   | ||||| || ||||||||||||| |||| |||||||| ||    
T  10272413 gcttatagaaacaa-cttatgacatgtctgtaagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacga 10272511  T
Q  383 aaagaatttgactcgattttatcttt 408  Q
    ||| |||||||||  |||||||||||    
T  10272512 aaacaatttgacttaattttatcttt 10272537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 419
Target Start/End: Complemental strand, 14295528 - 14295459
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaa 419  Q
    |||||||| |||||||||||| |||||||||||||| | |||||||  ||||||||||| |||| |||||    
T  14295528 atagcttacgaaaacagcttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaa 14295459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 442
Target Start/End: Original strand, 18704083 - 18704175
Alignment:
Q  349 aatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttata 442  Q
    ||||||||||||||||| |||| ||||||||| |||| |  ||||||  |||| |||||| |||| ||||| ||||||||||||| ||||||||    
T  18704083 aatagcttatgaaaacaacttatagcttatataaaaatagcttgactttattt-atcttttgttatagaaataacttatacataagaacttata 18704175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 433
Target Start/End: Original strand, 26209461 - 26209543
Alignment:
Q  350 atagcttatgaaaacagcttagagcttata-tgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataa 433  Q
    ||||||||||||||||||||| |||||||| |||||| |||| ||||  ||||||||||  |||| ||||| |||||||||||||    
T  26209461 atagcttatgaaaacagcttatagcttatattgaaaacaattggactttattttatctt--gttatagaaataacttatacataa 26209543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 425
Target Start/End: Original strand, 37588370 - 37588483
Alignment:
Q  312 ataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagt 411  Q
    ||||||| |||| ||||||||| |||| | | |||| |||| |||||||||||| |||| ||||||||||||||   ||||| | ||||||||||||  |    
T  37588370 ataagctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttatcttttat 37588469  T
Q  412 tacagaaacaactt 425  Q
    || ||||| |||||    
T  37588470 tatagaaataactt 37588483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 385
Target Start/End: Complemental strand, 28777048 - 28776980
Alignment:
Q  317 ctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    ||||||||| |||||||||||  ||| ||||| ||||||||||||||||||||| ||| |||| |||||    
T  28777048 ctatttttatcttattttcattagttctccaagatagcttatgaaaacagcttatagcctatacgaaaa 28776980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 442
Target Start/End: Original strand, 35135713 - 35135802
Alignment:
Q  349 aatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttata 442  Q
    ||||||||||||||    |||| |||||||||||||| | |||||||  ||||||||||| |||| ||||| | |||||||||||| |||||||    
T  35135713 aatagcttatgaaa----cttatagcttatatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataaacacttata 35135802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 348 - 427
Target Start/End: Original strand, 9703286 - 9703365
Alignment:
Q  348 aaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttat 427  Q
    ||||| |||||||||||| |||  ||||||||||||| || |||||||  ||||||||| | |||||||||| |||||||    
T  9703286 aaataacttatgaaaacaacttgtagcttatatgaaatgagtttgactttattttatctcttgttacagaaataacttat 9703365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 433
Target Start/End: Original strand, 38047903 - 38047986
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataa 433  Q
    |||||||||||||||||| || ||  |||||||||| |||||||||  ||||||||||| |||| ||| | | |||||||||||    
T  38047903 atagcttatgaaaacagcatatagtatatatgaaaataatttgactttattttatcttttgttagagatatagcttatacataa 38047986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 2568719 - 2568645
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    |||||| ||||||||||||||||||||  | | ||||  |||||||||||||||| |||| |||||||| |||||    
T  2568719 cataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaacttatagcttatacgaaaa 2568645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 391
Target Start/End: Complemental strand, 7319453 - 7319387
Alignment:
Q  325 agcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    |||||||||| ||| ||| ||||| |||||||| |||||||| ||| |||||||||||||| |||||    
T  7319453 agcttatttttataagttctccaagatagcttacgaaaacagtttatagcttatatgaaaacaattt 7319387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 395
Target Start/End: Original strand, 35553211 - 35553281
Alignment:
Q  325 agcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgact 395  Q
    ||||||||| |||| | | |||| |||||| |||||||| || ||| ||||||||||||||||||||||||    
T  35553211 agcttatttccataagctctccagaatagcgtatgaaaatagtttatagcttatatgaaaagaatttgact 35553281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 366
Target Start/End: Complemental strand, 41052959 - 41052874
Alignment:
Q  280 agagcttatagaaacaaacatataacacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacag 366  Q
    ||||||||||||||||| | ||| ||| || ||||| ||||||||| ||||||| |||| | | |||||||||| ||||||||||||    
T  41052959 agagcttatagaaacaacc-tatgacatgttcataaactatttttaacttatttccataagctctccaaaataggttatgaaaacag 41052874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 376
Target Start/End: Complemental strand, 7985030 - 7984965
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagctt 376  Q
    |||||||| |||| ||||||||||||||  || ||||| |||||||||||||| |||||| |||||    
T  7985030 cataagctgttttcagcttattttcataaattctccaagatagcttatgaaaaaagcttatagctt 7984965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 9174973 - 9174928
Alignment:
Q  156 agggcatgtttagattgacttatttgagcttatttactagcataaa 201  Q
    ||||||||||| ||||||||||||||||||||| || |||||||||    
T  9174973 agggcatgtttggattgacttatttgagcttatctattagcataaa 9174928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 344 - 393
Target Start/End: Complemental strand, 12975375 - 12975326
Alignment:
Q  344 tccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttga 393  Q
    ||||| |||||||||||| |||||||| |||||||||||||| |||||||    
T  12975375 tccaagatagcttatgaacacagcttatagcttatatgaaaacaatttga 12975326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 425
Target Start/End: Original strand, 37526209 - 37526322
Alignment:
Q  312 ataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagt 411  Q
    ||||||| |||| ||||||||| |||| | | |||| || | |||||||||||| |||| ||||||||||||||   ||||| | ||||||||||||  |    
T  37526209 ataagctgttttcagcttatttccataagctctccagaacaacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttatcttttat 37526308  T
Q  412 tacagaaacaactt 425  Q
    || ||||| |||||    
T  37526309 tatagaaataactt 37526322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 432
Target Start/End: Original strand, 37690646 - 37690767
Alignment:
Q  312 ataagctatttttagcttattttcatatgttatccaaaatagctt-atgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttag 410  Q
    ||||||| |||| ||||||||| |||| | | |||| |||| ||| ||||||||| |||| ||||||||||||||   ||||| | ||||||||||||      
T  37690646 ataagctgttttcagcttatttccataagctctccataataactttatgaaaacaacttatagcttatatgaaaactttttgatttgattttatctttta 37690745  T
Q  411 ttacagaaacaacttatacata 432  Q
    ||| ||||| ||||| ||||||    
T  37690746 ttatagaaataacttttacata 37690767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 391
Target Start/End: Complemental strand, 1619150 - 1619071
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    ||||| || |||| |||| ||||||||||| | |||||| | |||||||||||||||||| |||||||| | |||||||||    
T  1619150 cataaactgttttcagctgattttcatatgctctccaaa-tggcttatgaaaacagcttatagcttatacggaaagaattt 1619071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 41981874 - 41981942
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    ||||||||  ||||||||||||||| || ||| || ||||||| |||||||||||||||| || |||||    
T  41981874 cataagctgcttttagcttattttcgtaagttctcaaaaatagtttatgaaaacagcttatagtttata 41981942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 390
Target Start/End: Original strand, 6587116 - 6587195
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatt 390  Q
    |||||||| |||  |||||||||||| | ||| ||||  |||||||||||||||| |||| |||||||| ||||| ||||    
T  6587116 cataagctgtttacagcttattttcacaagttctccactatagcttatgaaaacaacttatagcttatacgaaaacaatt 6587195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 338
Target Start/End: Original strand, 11297114 - 11297232
Alignment:
Q  219 ctgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagct 318  Q
    ||||||| ||||  |||||| |||||||||| | |||||| || | |||||||||||   |||||||||| ||||| ||| ||  ||| ||| || ||||    
T  11297114 ctgtttgaattgacttatttaagcttatctagtggcataaacacttgtaagactgtttgaaagagcttatggaaac-aacttaagacatgtcaattagct 11297212  T
Q  319 atttttagcttattttcata 338  Q
    ||||| ||||||||||||||    
T  11297213 attttcagcttattttcata 11297232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 422
Target Start/End: Original strand, 12595789 - 12595860
Alignment:
Q  351 tagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaa 422  Q
    |||||||||||| ||||| | || ||||||||||| ||||| |||  ||||||||||| |||| ||||||||    
T  12595789 tagcttatgaaaccagctcatagtttatatgaaaacaatttaactttattttatcttttgttatagaaacaa 12595860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 433
Target Start/End: Complemental strand, 16889757 - 16889674
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataa 433  Q
    ||||||||||||||||||||| ||||| ||| |||| | |||||||  | ||||||||| ||||  |||| | |||||||||||    
T  16889757 atagcttatgaaaacagcttatagcttctataaaaacagtttgacttaagtttatcttttgttatggaaatagcttatacataa 16889674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 31723950 - 31723903
Alignment:
Q  168 gattgacttatttgagcttatttactagcataaagaccaatgagacta 215  Q
    ||||||||||||||||||||| |||||||||||| ||  |||||||||    
T  31723950 gattgacttatttgagcttatgtactagcataaacacttatgagacta 31723903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 36326159 - 36326104
Alignment:
Q  220 tgtttggattgttttatttgagcttatctattagcataagcattggtaagactgtt 275  Q
    |||||||||||| |||||| |||||||||||| ||||||||| |||| ||| ||||    
T  36326159 tgtttggattgtcttattttagcttatctattggcataagcactggtgagattgtt 36326104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 391
Target Start/End: Original strand, 41957457 - 41957540
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    ||||||||| | |||| | |||||||||||| ||| || |  ||||||||||||||||||||| | |||| ||||||| |||||    
T  41957457 gtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaattt 41957540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 201
Target Start/End: Complemental strand, 1899295 - 1899265
Alignment:
Q  171 tgacttatttgagcttatttactagcataaa 201  Q
    |||||||||||||||||||||||||||||||    
T  1899295 tgacttatttgagcttatttactagcataaa 1899265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 378
Target Start/End: Complemental strand, 4620229 - 4620187
Alignment:
Q  336 atatgttatccaaaatagcttatgaaaacagcttagagcttat 378  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||    
T  4620229 atatgttctccaacatagcttatgaaaacagcttatagcttat 4620187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 366
Target Start/End: Original strand, 7319014 - 7319072
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacag 366  Q
    ||||||||| | || | |||||||||||||| ||| ||||| |||||||||||||||||    
T  7319014 gtccataagttgttctcagcttattttcataagttctccaagatagcttatgaaaacag 7319072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 9174967 - 9174929
Alignment:
Q  220 tgtttggattgttttatttgagcttatctattagcataa 258  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  9174967 tgtttggattgacttatttgagcttatctattagcataa 9174929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 10640014 - 10639960
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaaca 365  Q
    |||||||| ||| ||||||||||||||| ||| |||||||||| ||||| |||||    
T  10640014 cataagctttttctagcttattttcataagttctccaaaatagtttatgtaaaca 10639960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 433
Target Start/End: Original strand, 15402874 - 15402960
Alignment:
Q  347 aaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataa 433  Q
    ||||||| ||||||||||| |||| ||||| | |||||| | || ||||| ||||||||||| ||||  |||| |||||| ||||||    
T  15402874 aaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacataa 15402960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 370
Target Start/End: Original strand, 24030419 - 24030469
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    ||||||||||||||||||| |||||| || ||||||||| |||||| ||||    
T  24030419 tttttagcttattttcataagttatctaatatagcttataaaaacaactta 24030469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 426
Target Start/End: Original strand, 32969187 - 32969241
Alignment:
Q  372 agcttatatgaaaagaatttgactcgattttatctttagttacagaaacaactta 426  Q
    ||||||||| |||| |||||||||  ||||||||||| |||| ||||||||||||    
T  32969187 agcttatataaaaataatttgactttattttatcttttgttatagaaacaactta 32969241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 188
Target Start/End: Original strand, 34736434 - 34736472
Alignment:
Q  150 ccaattagggcatgtttagattgacttatttgagcttat 188  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  34736434 ccaaatagggcatgtttggattgacttatttgagcttat 34736472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 8651265 - 8651310
Alignment:
Q  156 agggcatgtttagattgacttatttgagcttatttactagcataaa 201  Q
    ||||||||||| ||||| ||||||||||||||| | ||||||||||    
T  8651265 agggcatgtttggattgccttatttgagcttatcttctagcataaa 8651310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 11457236 - 11457152
Alignment:
Q  233 ttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagct 318  Q
    ||||||||||||||||||| ||| || || | || ||||||||  ||||||||||| ||||| ||| ||| ||| |||||||||||    
T  11457236 ttatttgagcttatctattggcagaaacacttgtgagactgttttgaagagcttatggaaac-aacttatgacatgtccataagct 11457152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 16937800 - 16937841
Alignment:
Q  218 cctgtttggattgttttatttgagcttatctattagcataag 259  Q
    |||||||||||||  ||||||||||||||||| |||||||||    
T  16937800 cctgtttggattggcttatttgagcttatctactagcataag 16937841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 395
Target Start/End: Complemental strand, 34205261 - 34205216
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgact 395  Q
    |||||||||||||||| |||| ||||||||| |||| |||||||||    
T  34205261 atagcttatgaaaacaacttatagcttatataaaaataatttgact 34205216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 379
Target Start/End: Original strand, 40119880 - 40119945
Alignment:
Q  314 aagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    ||||| || |||| ||||||||| | ||||||||| || |||||||||||||| ||| ||||||||    
T  40119880 aagctgttcttagattattttcacaagttatccaagatcgcttatgaaaacaggttatagcttata 40119945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 408
Target Start/End: Complemental strand, 40120145 - 40120084
Alignment:
Q  347 aaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||| |||| |||||||| | || |||||||||||||| ||||||| | ||||||||||||    
T  40120145 aaaattgcttgtgaaaacaacctatagcttatatgaaaacaatttgatttgattttatcttt 40120084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 448
Target Start/End: Original strand, 6738458 - 6738553
Alignment:
Q  355 ttatgaaaacagcttagagc--ttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataa 448  Q
    |||||||||||||||| |||  ||| |||||||||||||||||  ||||| |||||  |||  |||| | |||||||||||  ||||||| |||||    
T  6738458 ttatgaaaacagcttatagcatttagatgaaaagaatttgactttattttgtcttttattattgaaatagcttatacataagtacttatatgataa 6738553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 6938649 - 6938693
Alignment:
Q  217 gcctgtttggattgttttatttgagcttatctattagcataagca 261  Q
    |||||||||||||   ||||||||||||||||| |||||||||||    
T  6938649 gcctgtttggattaggttatttgagcttatctactagcataagca 6938693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 7705911 - 7705955
Alignment:
Q  156 agggcatgtttagattgacttatttgagcttatttactagcataa 200  Q
    ||||| ||||| ||||||||||||||||| ||| |||||||||||    
T  7705911 agggcctgtttggattgacttatttgagcatatctactagcataa 7705955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 393
Target Start/End: Original strand, 19138766 - 19138810
Alignment:
Q  349 aatagcttatgaaaacagcttagagcttatatgaaaagaatttga 393  Q
    ||||||||||||||||| |||| ||||||| |||||| |||||||    
T  19138766 aatagcttatgaaaacaacttatagcttatctgaaaacaatttga 19138810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 32942659 - 32942611
Alignment:
Q  331 ttttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    |||||||| ||| ||||| ||||||||||||||||||||| ||| ||||    
T  32942659 ttttcataagttctccaagatagcttatgaaaacagcttatagcatata 32942611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 471
Target Start/End: Complemental strand, 36638719 - 36638647
Alignment:
Q  399 ttttatctttagttacagaaacaacttatacataaaaacttatacgataaatgcataattaagttgtttatcc 471  Q
    |||||||||| |||| ||||| |  |||||||| || || |||| ||||| ||| ||||||||||||||||||    
T  36638719 ttttatcttttgttatagaaatagtttatacattaacacctatatgataagtgcttaattaagttgtttatcc 36638647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 431
Target Start/End: Original strand, 40205072 - 40205201
Alignment:
Q  300 tataacacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgat 399  Q
    ||||||| |||||||| || |||| |||||||||  ||| | | ||||  |||||||||||||||| |||  || |||||||||||  || |||||| ||    
T  40205072 tataacatgtccataatctgttttcagcttatttctataagctctccaggatagcttatgaaaacaactt--agtttatatgaaaactatctgactcaat 40205169  T
Q  400 tttatctttagttacagaaacaacttatacat 431  Q
    |||| |||| |||| ||||  | |||||||||    
T  40205170 tttaccttttgttatagaagtatcttatacat 40205201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 41277392 - 41277456
Alignment:
Q  344 tccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||| |||||||||||||||| |||  | |||||||||||| | |||||||  |||||||||||    
T  41277392 tccaagatagcttatgaaaacaacttttaacttatatgaaaacagtttgactttattttatcttt 41277456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 370
Target Start/End: Complemental strand, 42582982 - 42582914
Alignment:
Q  302 taacacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    ||||| || ||||| || |||| |||||||||||||| ||| ||||| ||||||||  |||||||||||    
T  42582982 taacatgttcataaactgttttgagcttattttcataagttctccaatatagcttacaaaaacagctta 42582914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 8e-22; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 40688995 - 40689092
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||||||| |||| |||||||||||||| ||||||||  |||||||||||| |||||||| |||||||||||||| ||||| |||  |||||||||||    
T  40688995 cataagctgttttgagcttattttcataagttatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttatcttt 40689092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 451
Target Start/End: Complemental strand, 27548310 - 27548184
Alignment:
Q  325 agcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaact 424  Q
    ||||||| | |||| ||||||||| ||||||||||||||||||||| |||||| ||||||| |||| ||||  ||||||||||| | ||  |||| | ||    
T  27548310 agcttatctccataagttatccaagatagcttatgaaaacagcttatagcttaaatgaaaacaattagactttattttatcttttgctaaggaaatagct 27548211  T
Q  425 tatacataaaaacttatacgataaatg 451  Q
    |||| ||||  ||||||| ||||||||    
T  27548210 tatagataagcacttataagataaatg 27548184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 434
Target Start/End: Original strand, 48157075 - 48157252
Alignment:
Q  256 taagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagctatttttagcttattttcatatgttatccaaaatagct 355  Q
    |||||||| || ||||||||  | ||||||||||||||||| | |||  || ||||||||||| |||| ||||||||| |||| | | |||  |||||||    
T  48157075 taagcatttgtgagactgtttgggagagcttatagaaacaa-cttatgccatgtccataagctgttttcagcttatttccataagatctcccgaatagct 48157173  T
Q  356 tatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaa 434  Q
    | ||||||||  ||| ||||||||| |||| ||||| |||  |||||||||||  ||| ||||| || |||||||||||    
T  48157174 tgtgaaaacaaattatagcttatattaaaacaatttcactttattttatcttttattatagaaataagttatacataaa 48157252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 392
Target Start/End: Complemental strand, 38010790 - 38010694
Alignment:
Q  296 aacatataacacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttg 392  Q
    |||| |||||| || |||||||| |||||||||||||| |||| ||| || |  |||| |||||||||||||||| |||||||||||||| ||||||    
T  38010790 aacaaataacatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttg 38010694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 315 - 391
Target Start/End: Complemental strand, 47177693 - 47177617
Alignment:
Q  315 agctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    ||||| ||||||||||||||||||  || ||||| ||||||| ||||||||||||| |||||||||||||| |||||    
T  47177693 agctacttttagcttattttcataaattctccaagatagcttttgaaaacagcttatagcttatatgaaaacaattt 47177617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 320 - 407
Target Start/End: Complemental strand, 12110412 - 12110325
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    ||||||| ||||||||||| ||| | ||| ||||||||||||||||||||| ||||||||  |||| |||||||||  ||||||||||    
T  12110412 tttttagattattttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaaaacaatttgactttattttatctt 12110325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 28165152 - 28165030
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttag 410  Q
    |||||||| |||| | ||||||| |||| | | ||||  ||||||||| || |||| ||| ||||||||| |||| |||||||||  ||||||||||| |    
T  28165152 cataagctgttttcaacttatttccataagctctccatgatagcttataaagacagtttatagcttatattaaaacaatttgacttcattttatcttttg 28165053  T
Q  411 ttacagaaacaacttatacataa 433  Q
    ||| ||||| |||||||||||||    
T  28165052 ttatagaaagaacttatacataa 28165030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 314 - 440
Target Start/End: Complemental strand, 39506014 - 39505889
Alignment:
Q  314 aagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagtta 413  Q
    |||||||||| ||||||||| ||||   | |||| ||||||||||||||||| ||||  ||||||||| ||| | |||||||| |||| |||||| | ||    
T  39506014 aagctattttcagcttatttccataaactctccagaatagcttatgaaaacaacttaatgcttatatg-aaacagtttgactctatttaatcttttgcta 39505916  T
Q  414 cagaaacaacttatacataaaaactta 440  Q
    || ||| |||||||||||||| |||||    
T  39505915 caaaaataacttatacataaacactta 39505889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 20526505 - 20526448
Alignment:
Q  313 taagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    |||||| ||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  20526505 taagctgtttttagcttattttcattagttctccaaaatagcttatgaaaacagctta 20526448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 47510190 - 47510116
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    ||||||||  |||||||||||||||| | ||| ||||| | || |||||||||||||||| ||||||||||||||    
T  47510190 cataagctccttttagcttattttcacaagttgtccaagagagtttatgaaaacagcttacagcttatatgaaaa 47510116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 6263382 - 6263446
Alignment:
Q  321 ttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    ||||||||||||| |||||| | |||| |||||||||||||| ||||||| | ||||||||||||    
T  6263382 ttttagcttatttccatatgctctccataatagcttatgaaatcagcttataacttatatgaaaa 6263446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 395
Target Start/End: Complemental strand, 44822004 - 44821936
Alignment:
Q  327 cttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgact 395  Q
    |||||||||||| ||| |||| |||||||||||||||||||||| | ||||||  |||| |||||||||    
T  44822004 cttattttcataagttctccagaatagcttatgaaaacagcttataacttatacaaaaacaatttgact 44821936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 49060556 - 49060464
Alignment:
Q  356 tatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataa 448  Q
    |||||||| | |||| ||||||||| |||| |||||||||  ||||||| ||| |||| ||||| | |||||||||||| ||||||| |||||    
T  49060556 tatgaaaataacttatagcttatataaaaataatttgactttattttattttttgttatagaaatagcttatacataaatacttatatgataa 49060464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 449
Target Start/End: Complemental strand, 992092 - 991993
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataaa 449  Q
    |||||||||||||| || ||| | |||||||||||| | |||| ||  ||||||| ||| |||| ||||||||||||||| |||  ||||||| ||||||    
T  992092 atagcttatgaaaaaagtttataccttatatgaaaatattttgtctttattttattttttgttatagaaacaacttatacgtaagcacttatatgataaa 991993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 434
Target Start/End: Complemental strand, 1417285 - 1417202
Alignment:
Q  351 tagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaa 434  Q
    ||||||||||||||| ||||  ||||||||||||| |||||||||  ||||||||||| |||| | ||| |  |||||||||||    
T  1417285 tagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttatcttttgttatataaatagtttatacataaa 1417202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 24363517 - 24363560
Alignment:
Q  218 cctgtttggattgttttatttgagcttatctattagcataagca 261  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  24363517 cctgtttggattgttttatttgagtttatctactagcataagca 24363560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 311 - 370
Target Start/End: Complemental strand, 48470105 - 48470046
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    |||||||| |||| ||||||| |||||| ||||| |||||||||||||||||||| ||||    
T  48470105 cataagcttttttgagcttatgttcataagttattcaaaatagcttatgaaaacaactta 48470046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 442
Target Start/End: Original strand, 27481320 - 27481434
Alignment:
Q  328 ttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttat 427  Q
    |||||| |||| | ||||||  |||||||||||||| | |||| |||||||||| ||| | |||||||   ||||||| || |||| ||||| | |||||    
T  27481320 ttatttccataagctatccatgatagcttatgaaaataacttatagcttatatggaaacagtttgacttcgttttatcctttgttatagaaatagcttat 27481419  T
Q  428 acataaaaacttata 442  Q
    ||||||| |||||||    
T  27481420 acataaacacttata 27481434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 28340892 - 28340950
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||||||||||||||||||| ||||||||||| || |||||||||  |||| ||||||    
T  28340892 atagcttatgaaaacagcttatagcttatatgacaacaatttgacttcatttcatcttt 28340950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 419
Target Start/End: Complemental strand, 21453316 - 21453247
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaa 419  Q
    ||||||||||||||||| ||| ||||||||||| || || ||||||  || |||||||| ||||||||||    
T  21453316 atagcttatgaaaacagtttatagcttatatgagaacaacttgactttatcttatcttttgttacagaaa 21453247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 320 - 408
Target Start/End: Complemental strand, 46825151 - 46825062
Alignment:
Q  320 tttttagcttattt-tcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||||||||||||| ||||| |   ||||| ||||||||||||||| | |||  ||||||||||||| |||||||||  |||||||||||    
T  46825151 tttttagcttatttctcataagcactccaagatagcttatgaaaacggtttatggcttatatgaaaacaatttgactttattttatcttt 46825062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 432
Target Start/End: Complemental strand, 7623202 - 7623078
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    ||||||||| | ||||| |||||||||| ||   | | ||| |||| ||||||||| |||||| ||||||||| |||||| || ||||  |||||| |||    
T  7623202 gtccataagttgtttttggcttattttcgtaaactcttcaagatagtttatgaaaatagcttacagcttatataaaaagagttggactttattttacctt 7623103  T
Q  408 tagttacagaaacaacttatacata 432  Q
    | |||| | ||| ||||||||||||    
T  7623102 ttgttataaaaataacttatacata 7623078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 23215014 - 23214954
Alignment:
Q  154 ttagggcatgtttagattgacttatttgagcttatttactagcataaagaccaatgagact 214  Q
    |||| |||||||| ||||||||||||||| ||||| |||||||||||| ||  ||||||||    
T  23215014 ttagagcatgtttggattgacttatttgaccttatctactagcataaacacttatgagact 23214954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 408
Target Start/End: Original strand, 30456476 - 30456556
Alignment:
Q  328 ttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||||||||| | | ||||| |||| ||||||||||  |||| | |||||||||||| |||||||||  |||||||||||    
T  30456476 ttattttcataagctctccaagatagtttatgaaaaccacttataacttatatgaaaacaatttgactttattttatcttt 30456556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 408
Target Start/End: Complemental strand, 31002781 - 31002725
Alignment:
Q  352 agcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||||| ||||||||||| |||||||||||||| | |||||||  |||||||||||    
T  31002781 agcttatcaaaacagcttatagcttatatgaaaatattttgactttattttatcttt 31002725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 471
Target Start/End: Original strand, 38713202 - 38713258
Alignment:
Q  415 agaaacaacttatacataaaaacttatacgataaatgcataattaagttgtttatcc 471  Q
    ||||| |||||||||| ||  ||||||| ||||||||| ||||||||||||||||||    
T  38713202 agaaataacttatacacaatcacttataagataaatgcttaattaagttgtttatcc 38713258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 753029 - 752962
Alignment:
Q  312 ataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    ||||||| ||||||||| ||||||||||| |  |||| |||| |||| ||||||||||| ||||||||    
T  753029 ataagctgtttttagctaattttcatatgctccccaagatagtttatcaaaacagcttatagcttata 752962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 449
Target Start/End: Complemental strand, 22759208 - 22759109
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataaa 449  Q
    ||||||||||||| ||||||  |||||||||||||| |||||  ||  ||||||||||| |||| | ||| | |||| |||||||  |||||| ||||||    
T  22759208 atagcttatgaaatcagcttttagcttatatgaaaacaattttcctttattttatcttttgttatacaaatagcttaaacataaacgcttatatgataaa 22759109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 395
Target Start/End: Complemental strand, 24909692 - 24909641
Alignment:
Q  344 tccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgact 395  Q
    |||| |||| |||||||||||| |||| |||||||||||||| |||||||||    
T  24909692 tccacaatatcttatgaaaacaacttatagcttatatgaaaataatttgact 24909641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 433
Target Start/End: Complemental strand, 34441115 - 34441028
Alignment:
Q  346 caaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataa 433  Q
    |||||||||||||||||| || ||| |||||||||| ||| ||||| |||  |||||||| || |||| || || ||| |||||||||    
T  34441115 caaaatagcttatgaaaatagtttacagcttatatgcaaacaatttaactttattttatcgtttgttagaggaataacgtatacataa 34441028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 43648285 - 43648242
Alignment:
Q  327 cttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    ||||||||||||| || ||||| |||||||||||||||||||||    
T  43648285 cttattttcatattttctccaagatagcttatgaaaacagctta 43648242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 379
Target Start/End: Original strand, 45790443 - 45790502
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    |||| |||||||||||||| ||||||||| |||| |||| |||||| |||| ||||||||    
T  45790443 ttttcagcttattttcataagttatccaatatagtttataaaaacaacttatagcttata 45790502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 405
Target Start/End: Original strand, 47046156 - 47046211
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatc 405  Q
    |||||||||||||||| ||  ||||||||||||||| |||||||||  ||||||||    
T  47046156 atagcttatgaaaacaactcggagcttatatgaaaacaatttgactttattttatc 47046211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 370
Target Start/End: Complemental strand, 6601431 - 6601369
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    |||||||||||||| | |||||||||||||| |   |||| |||||||||| |||||||||||    
T  6601431 gtccataagctattctcagcttattttcataagcactccagaatagcttataaaaacagctta 6601369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 33128813 - 33128755
Alignment:
Q  312 ataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    ||||||| ||||||||||||||||| | ||| ||||| |||| ||||| ||||||||||    
T  33128813 ataagctttttttagcttattttcacaagttctccaatatagtttatgtaaacagctta 33128755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 428
Target Start/End: Original strand, 39591539 - 39591593
Alignment:
Q  374 cttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttata 428  Q
    |||||||||||| |||||||||  ||||||||||| |||| ||||| ||||||||    
T  39591539 cttatatgaaaacaatttgactttattttatcttttgttatagaaataacttata 39591593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 449
Target Start/End: Complemental strand, 47004108 - 47004010
Alignment:
Q  351 tagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataaa 449  Q
    |||||||||||||||||||| || | |||| |||| | |||||||  ||||||||| | |||| ||||| | |||| | ||||| ||||||| ||||||    
T  47004108 tagcttatgaaaacagcttatagttcatataaaaatagtttgactttattttatctattgttatagaaatagcttacatataaacacttatatgataaa 47004010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 432
Target Start/End: Original strand, 5006558 - 5006639
Alignment:
Q  351 tagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacata 432  Q
    |||||||||||||||  ||| | |||||||||||| | |||||||  ||||||||||| |||| || || | ||||||||||    
T  5006558 tagcttatgaaaacaatttataccttatatgaaaacagtttgactttattttatcttttgttataggaatagcttatacata 5006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 395
Target Start/End: Original strand, 5369739 - 5369784
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgact 395  Q
    ||||||||||||||||||||| ||| |||||||||| | |||||||    
T  5369739 atagcttatgaaaacagcttatagcatatatgaaaacagtttgact 5369784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 434
Target Start/End: Complemental strand, 23918980 - 23918895
Alignment:
Q  349 aatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaa 434  Q
    ||||| ||||||  |||| ||| |||||||||||||| |||||||||  ||||||||||| || | ||| | |||||| |||||||    
T  23918980 aatagtttatgattacagattatagcttatatgaaaacaatttgactttattttatcttttgtaatagagataacttacacataaa 23918895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 376
Target Start/End: Complemental strand, 33678825 - 33678776
Alignment:
Q  327 cttattttcatatgttatccaaaatagcttatgaaaacagcttagagctt 376  Q
    |||||||||| | ||| ||||| ||||||||||||||||||||| |||||    
T  33678825 cttattttcacaagttttccaagatagcttatgaaaacagcttatagctt 33678776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 34083520 - 34083565
Alignment:
Q  155 tagggcatgtttagattgacttatttgagcttatttactagcataa 200  Q
    |||||||||||| |||||||||||||||||| || |||| ||||||    
T  34083520 tagggcatgtttggattgacttatttgagctcatctacttgcataa 34083565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 394
Target Start/End: Complemental strand, 39518852 - 39518807
Alignment:
Q  349 aatagcttatgaaaacagcttagagcttatatgaaaagaatttgac 394  Q
    ||||||||||||||||| |||| |||||||||| ||| ||||||||    
T  39518852 aatagcttatgaaaacaacttaaagcttatatgcaaacaatttgac 39518807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 379
Target Start/End: Original strand, 46280284 - 46280349
Alignment:
Q  314 aagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    ||||| |||| ||| |||||||||| ||| ||||| ||||||||| ||||||||||| ||| ||||    
T  46280284 aagcttttttcagcctattttcataagttctccaatatagcttataaaaacagcttatagcatata 46280349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 395
Target Start/End: Original strand, 46609074 - 46609186
Alignment:
Q  282 agcttatagaaacaaacatataacacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatg 381  Q
    |||||||||||||| ||| |||||| ||| |||| ||||||| ||||||||| ||||   | || |||||| ||||  | ||||||||| | ||||||||    
T  46609074 agcttatagaaacagaca-ataacatgtctataaactattttcagcttatttccataatctctcaaaaataacttaccagaacagcttataccttatatg 46609172  T
Q  382 aaaagaatttgact 395  Q
    |||| | |||||||    
T  46609173 aaaacagtttgact 46609186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 448
Target Start/End: Complemental strand, 2223120 - 2223072
Alignment:
Q  400 tttatctttagttacagaaacaacttatacataaaaacttatacgataa 448  Q
    ||||||||| |||| ||||| | |||||||||||| |||||||||||||    
T  2223120 tttatcttttgttatagaaatagcttatacataaacacttatacgataa 2223072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 5010390 - 5010426
Alignment:
Q  162 tgtttagattgacttatttgagcttatttactagcat 198  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  5010390 tgttttgattgacttatttgagtttatttactagcat 5010426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 434
Target Start/End: Complemental strand, 8680986 - 8680930
Alignment:
Q  378 tatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaa 434  Q
    |||||||| |||||||||  ||| ||||||| |||||| ||| ||||||||||||||    
T  8680986 tatgaaaataatttgactttattatatcttttgttacaaaaataacttatacataaa 8680930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 25507308 - 25507252
Alignment:
Q  415 agaaacaacttatacataaaaacttatacgataaatgcataattaagttgtttatcc 471  Q
    ||||| |||||||||||||| |||||| | | || ||| ||||||||||||||||||    
T  25507308 agaaataacttatacataaacacttatcctaaaagtgcttaattaagttgtttatcc 25507252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 385
Target Start/End: Complemental strand, 30535622 - 30535550
Alignment:
Q  313 taagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    |||||| |||| || ||||||||||||||| |  || |||||||||| |||||||||| || ||||| |||||    
T  30535622 taagctgttttcaggttattttcatatgttctataagatagcttatggaaacagcttatagattatacgaaaa 30535550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 32410688 - 32410648
Alignment:
Q  223 ttggattgttttatttgagcttatctattagcataagcatt 263  Q
    ||||||||  ||||||||||||||||||| |||||||||||    
T  32410688 ttggattggcttatttgagcttatctattggcataagcatt 32410648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 433
Target Start/End: Complemental strand, 35536114 - 35536046
Alignment:
Q  365 agcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataa 433  Q
    |||||| | |||||||||||| |||||||||  ||||||||||  |||| ||||| | |||||||||||    
T  35536114 agcttataacttatatgaaaacaatttgactttattttatcttatgttatagaaatagcttatacataa 35536046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 36517640 - 36517588
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaa 363  Q
    ||||||||||||| || |||||||||||  || ||||| ||||||||||||||    
T  36517640 cataagctattttcagtttattttcataatttctccaagatagcttatgaaaa 36517588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 408
Target Start/End: Original strand, 37064482 - 37064570
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||| |||||||||||||| ||  || ||||||||||| |||||||||||| ||| ||| | |||| ||||| |||  |||| ||||||    
T  37064482 ttttcagcttattttcataagtcctctaaaatagcttacgaaaacagcttatagcatatgtaaaaacaatttaactgtatttcatcttt 37064570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 40371567 - 40371599
Alignment:
Q  156 agggcatgtttagattgacttatttgagcttat 188  Q
    ||||||||||| |||||||||||||||||||||    
T  40371567 agggcatgtttggattgacttatttgagcttat 40371599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 40598404 - 40598440
Alignment:
Q  162 tgtttagattgacttatttgagcttatttactagcat 198  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  40598404 tgtttggattgacttatttgagcttatctactagcat 40598440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 47559629 - 47559669
Alignment:
Q  330 attttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    ||||||||| ||| ||||||||| |||||||||||||||||    
T  47559629 attttcataagttctccaaaataacttatgaaaacagctta 47559669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 77)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 220 - 448
Target Start/End: Complemental strand, 11514047 - 11513825
Alignment:
Q  220 tgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagcta 319  Q
    ||||||||||| |||||||||| ||||||| ||||||||||| | || ||||||||    |||||||||  |||||     ||  || | | ||||||||    
T  11514047 tgtttggattggtttatttgagattatctactagcataagcacttgtgagactgttttagagagcttatgaaaacagc---atggcatgcctataagcta 11513951  T
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaa 419  Q
    |||| ||||||||| || | ||| ||||  |||||||||||||||| |||| |||||||||||||| |||||||||  ||||||||||| |||   | ||    
T  11513950 ttttcagcttatttccaaaagttctccatgatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatcttttgtt---gtaa 11513854  T
Q  420 caacttatacataaaaacttatacgataa 448  Q
     ||||||||||||||  |||||| |||||    
T  11513853 taacttatacataaacccttatatgataa 11513825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 311 - 391
Target Start/End: Complemental strand, 18066189 - 18066109
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    ||||||||||||| | ||||||||| || ||| ||||| ||||||||||||||||||||| |||||||||||||| |||||    
T  18066189 cataagctattttcaccttattttcttaagttctccaagatagcttatgaaaacagcttatagcttatatgaaaacaattt 18066109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 392
Target Start/End: Original strand, 22681179 - 22681275
Alignment:
Q  296 aacatataacacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttg 392  Q
    |||| |||||| || |||||||| |||||||||||||| |||| ||| || |  |||| |||||||||||||||| |||||||||||||| ||||||    
T  22681179 aacaaataacatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttg 22681275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 448
Target Start/End: Complemental strand, 10143194 - 10143096
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataa 448  Q
    |||||||||||||| | |||| ||||||||| |||| | |||||||  ||||||||||| |||| ||||| |||||||||||||  |||||| ||||||    
T  10143194 atagcttatgaaaaaaacttatagcttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatacataagcacttattcgataa 10143096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 385
Target Start/End: Complemental strand, 15377903 - 15377752
Alignment:
Q  233 ttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagctattttta-gcttat 331  Q
    |||||||||||||| || || |||||||| | ||||| |||||  ||| | || || ||||||| | ||| |||||||||||||||||||||| | ||||    
T  15377903 ttatttgagcttatgtactaacataagcaattgtaaggctgtttggaaaatct-atggaaacaa-cttatgacacgtccataagctatttttaagtttat 15377806  T
Q  332 tttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    ||||||| | |   || |||||||||||||||||||||| | ||||||||||||    
T  15377805 tttcataagctcctcagaatagcttatgaaaacagcttataacttatatgaaaa 15377752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 385
Target Start/End: Original strand, 18179246 - 18179323
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    |||||| ||||||||| ||||||||||| || ||| ||||  ||||||||||||| ||||||| ||||||||||||||    
T  18179246 gtccattagctattttcagcttattttcgtaagttctccaggatagcttatgaaagcagcttatagcttatatgaaaa 18179323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 433
Target Start/End: Complemental strand, 2416331 - 2416252
Alignment:
Q  354 cttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataa 433  Q
    ||||| ||||||||||| ||||||||| |||| ||||| |||  ||||||||||| | |||||||| |||||||||||||    
T  2416331 cttataaaaacagcttatagcttatatcaaaacaatttaacttcattttatcttttgctacagaaataacttatacataa 2416252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 329 - 391
Target Start/End: Complemental strand, 8017477 - 8017415
Alignment:
Q  329 tattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    |||||||||| ||| ||||| ||||||||||||||||| ||| |||||||||||||| |||||    
T  8017477 tattttcataagttctccaagatagcttatgaaaacagtttacagcttatatgaaaataattt 8017415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 429
Target Start/End: Original strand, 41875675 - 41875780
Alignment:
Q  324 tagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaac 423  Q
    |||||||||||| || | |  |||| ||||||||||||||||||||| |||||||| ||||| || || ||   ||||||||||| |||| ||||||| |    
T  41875675 tagcttattttcttaagctcaccaagatagcttatgaaaacagcttacagcttatacgaaaacaacttaacatcattttatctttggttaaagaaacagc 41875774  T
Q  424 ttatac 429  Q
    ||||||    
T  41875775 ttatac 41875780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 408
Target Start/End: Original strand, 6993730 - 6993830
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    |||||||||  |||||||||||||||||||| | | || |  |||||||||||||||| | || |||||||||||| | ||||||||   ||||||||||    
T  6993730 gtccataagtcatttttagcttattttcataagctctcaagcatagcttatgaaaacaacctatagcttatatgaatataatttgaccttattttatctt 6993829  T
Q  408 t 408  Q
    |    
T  6993830 t 6993830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 470
Target Start/End: Complemental strand, 10150729 - 10150657
Alignment:
Q  398 attttatctttagttacagaaacaacttatacataaaaacttatacgataaatgcataattaagttgtttatc 470  Q
    |||||||||||  ||| ||||| |||||||||||||| |||||||  |||| ||| |||||||||||||||||    
T  10150729 attttatcttttattatagaaataacttatacataaacacttatataataagtgcttaattaagttgtttatc 10150657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 395
Target Start/End: Original strand, 29643465 - 29643509
Alignment:
Q  351 tagcttatgaaaacagcttagagcttatatgaaaagaatttgact 395  Q
    ||||||||||||||||||||||||||||||||||  |||||||||    
T  29643465 tagcttatgaaaacagcttagagcttatatgaaagtaatttgact 29643509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 408
Target Start/End: Complemental strand, 42458000 - 42457912
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||| |||||||||||||||||| || || |||||||||||| |||||| |||||||| |  |||| ||||| |||  |||||||||||    
T  42458000 ttttcagcttattttcatatgttctctaagatagcttatgaatacagctaagagcttaaacaaaaacaatttaactttattttatcttt 42457912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 2416473 - 2416426
Alignment:
Q  153 attagggcatgtttagattgacttatttgagcttatttactagcataa 200  Q
    ||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  2416473 attagggcatgtttagattgacttatttgagtttatctactaacataa 2416426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 433
Target Start/End: Original strand, 17952749 - 17952832
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataa 433  Q
    |||||||||||||||| |||  |||||||||||||| | |||||||  ||||||||||| |||| ||||| | |||||| ||||    
T  17952749 atagcttatgaaaacatcttgtagcttatatgaaaatagtttgactttattttatcttttgttatagaaatagcttatatataa 17952832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 354 - 445
Target Start/End: Original strand, 35755554 - 35755645
Alignment:
Q  354 cttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacga 445  Q
    |||||||||||| |||| |||||| ||||||| |||||||||  ||||| | |||  ||| ||||| | |||||||||||| ||||||||||    
T  35755554 cttatgaaaacaacttatagcttacatgaaaacaatttgactttattttctatttgattatagaaatagcttatacataaacacttatacga 35755645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 408
Target Start/End: Original strand, 12464485 - 12464579
Alignment:
Q  314 aagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||| |||| |||||||||||| | ||| ||||| |||||||||||||| |||||| ||| ||||  |||| ||||| |||  |||||||||||    
T  12464485 aagcttttttcagcttattttcacaagttctccaagatagcttatgaaaatagcttatagcatatacaaaaacaatttaactttattttatcttt 12464579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 15370239 - 15370297
Alignment:
Q  217 gcctgtttggattgttttatttgagcttatctattagcataagcattggtaagactgtt 275  Q
    ||||||||||||||  ||||||||||||||||| | ||||||||||| || ||||||||    
T  15370239 gcctgtttggattgacttatttgagcttatctactggcataagcatttgtgagactgtt 15370297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 333
Target Start/End: Complemental strand, 32821961 - 32821848
Alignment:
Q  219 ctgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagct 318  Q
    |||||| |||||  |||||||||||||||||  | | |||||||| | |||||||||  |||||| |||||||||| ||| ||| ||| |||||||||||    
T  32821961 ctgtttagattgacttatttgagcttatctaccaacgtaagcatttgcaagactgtttggaagagtttatagaaac-aacttatgacatgtccataagct 32821863  T
Q  319 atttttagcttattt 333  Q
     |||| || ||||||    
T  32821862 gttttcagtttattt 32821848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 421
Target Start/End: Complemental strand, 36043965 - 36043855
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttag 410  Q
    |||||||| ||||||||| | ||||||| | | ||||| ||| || ||||| |||| ||| |||||||| ||||| ||||| |||| ||||||||||| |    
T  36043965 cataagctgtttttagctcaatttcataagctctccaagataactaatgaagacagtttatagcttatacgaaaacaatttaactcaattttatctttcg 36043866  T
Q  411 ttacagaaaca 421  Q
     || |||||||    
T  36043865 ctatagaaaca 36043855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 428
Target Start/End: Original strand, 656802 - 656903
Alignment:
Q  327 cttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaactta 426  Q
    |||||||||||| | | | ||| ||||||||||||| || |||| |||||||| ||||| ||||||| |  ||||||||||| |||| ||||| | ||||    
T  656802 cttattttcataagctctgcaagatagcttatgaaatcaacttacagcttatacgaaaacaatttgattatattttatcttttgttatagaaatagctta 656901  T
Q  427 ta 428  Q
    ||    
T  656902 ta 656903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 375 - 448
Target Start/End: Original strand, 3423841 - 3423914
Alignment:
Q  375 ttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataa 448  Q
    ||||||||||| |||||||||  ||||||||||| | |||| ||| |||||||||||||| |||| || |||||    
T  3423841 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 3423914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 6167305 - 6167358
Alignment:
Q  324 tagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagctta 377  Q
    |||||||||| |||| ||| ||||||||||||||| ||||||||||| ||||||    
T  6167305 tagcttatttccataagttctccaaaatagcttataaaaacagcttatagctta 6167358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 431
Target Start/End: Original strand, 23143030 - 23143107
Alignment:
Q  354 cttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacat 431  Q
    |||||||||||| || | |||||||| ||||| ||||||| | |||||||||||| |||||| ||| | |||||||||    
T  23143030 cttatgaaaacaactaatagcttataagaaaacaatttgatttgattttatcttttgttacaaaaatagcttatacat 23143107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 431
Target Start/End: Original strand, 23554820 - 23554897
Alignment:
Q  354 cttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacat 431  Q
    |||||||||||| || | |||||||| ||||| ||||||| | |||||||||||| |||||| ||| | |||||||||    
T  23554820 cttatgaaaacaactaatagcttataagaaaacaatttgatttgattttatcttttgttacaaaaatagcttatacat 23554897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 25800851 - 25800810
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    ||||||||||||||||||||| |||||||||||||| |||||    
T  25800851 atagcttatgaaaacagcttatagcttatatgaaaacaattt 25800810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 39983402 - 39983329
Alignment:
Q  312 ataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    |||||||||||| || ||||||||||  | | ||||  |||||||||||||||| |||| ||||||||||||||    
T  39983402 ataagctattttcagtttattttcattagctctccaggatagcttatgaaaacaacttatagcttatatgaaaa 39983329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 408
Target Start/End: Complemental strand, 9395190 - 9395094
Alignment:
Q  312 ataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||||| |||| |||||||||||||| | | | || |||| || |||||||||||||| || ||||||||||| |||||  ||  |||||||||||    
T  9395190 ataagctgttttcagcttattttcataagctctacagaataactaatgaaaacagcttatagattatatgaaaacaatttagctttattttatcttt 9395094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 26143656 - 26143708
Alignment:
Q  318 tatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    |||||| |||||||||||||| ||| |||||  ||||||||||||||||||||    
T  26143656 tattttcagcttattttcataagttctccaagttagcttatgaaaacagctta 26143708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 391
Target Start/End: Complemental strand, 26626934 - 26626854
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    ||||| || |||| || ||||||||||| ||| | ||| ||||||||||||||||||||  |||||||| ||||| |||||    
T  26626934 cataatctgttttcaggttattttcataagttctgcaagatagcttatgaaaacagcttctagcttatacgaaaacaattt 26626854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 407
Target Start/End: Original strand, 28039341 - 28039437
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    |||||||| |||| ||||||||| ||||  || ||||| | ||||||||||||  ||||| || ||||||||||| |||| ||||  ||||||||||    
T  28039341 cataagctgttttcagcttatttccataacttttccaagaaagcttatgaaaattgcttatagtttatatgaaaacaattggactttattttatctt 28039437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 391
Target Start/End: Original strand, 29316784 - 29316864
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    |||||| | |||| ||||||||| |||| ||| ||||| |||||| |||||||||||||| || |||| |||||| |||||    
T  29316784 cataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagcttatagattatgtgaaaacaattt 29316864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 33503153 - 33503105
Alignment:
Q  216 agcctgtttggattgttttatttgagcttatctattagcataagcattg 264  Q
    |||||||||| ||||  ||||||||||||||||| ||||||||||||||    
T  33503153 agcctgtttgtattggcttatttgagcttatctactagcataagcattg 33503105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 40279258 - 40279190
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    ||||| ||||||| |||| ||||||||| ||| ||||| |||||||||||||||| |||| | ||||||    
T  40279258 cataaactattttcagctaattttcataagttctccaacatagcttatgaaaacaacttatatcttata 40279190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 391
Target Start/End: Complemental strand, 680555 - 680484
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    |||| |||||||||||| | ||| | ||| |||||||||||||| |||||| |||||||| ||||| |||||    
T  680555 ttttcagcttattttcacaagttcttcaagatagcttatgaaaatagcttatagcttatacgaaaacaattt 680484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 366
Target Start/End: Complemental strand, 3611287 - 3611232
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacag 366  Q
    ||||| || ||||||||||||||||||| ||| ||||| ||||||| |||||||||    
T  3611287 cataaactgtttttagcttattttcataagttctccaagatagcttgtgaaaacag 3611232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 407
Target Start/End: Original strand, 7103489 - 7103588
Alignment:
Q  309 tccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaa-cagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    |||||||| | ||||||||||||||||| |   | || || |||||||||||||| ||||||| ||||||||| |||| | |||||||  ||||||||||    
T  7103489 tccataagttgtttttagcttattttcacaaactctctaagatagcttatgaaaaacagcttatagcttatattaaaacagtttgactttattttatctt 7103588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 370
Target Start/End: Complemental strand, 9174876 - 9174817
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    ||||||||||||| |||||||||||||| | | |  || |||||||||||||||||||||    
T  9174876 cataagctattttcagcttattttcataagctctgtaagatagcttatgaaaacagctta 9174817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 197
Target Start/End: Complemental strand, 9395280 - 9395245
Alignment:
Q  162 tgtttagattgacttatttgagcttatttactagca 197  Q
    ||||| ||||||||||||||||||||||||||||||    
T  9395280 tgtttggattgacttatttgagcttatttactagca 9395245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 275
Target Start/End: Complemental strand, 14302961 - 14302918
Alignment:
Q  232 tttatttgagcttatctattagcataagcattggtaagactgtt 275  Q
    ||||||||||||||||||||||||||| |||| || ||||||||    
T  14302961 tttatttgagcttatctattagcataaacatttgtgagactgtt 14302918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 379
Target Start/End: Original strand, 33931612 - 33931647
Alignment:
Q  344 tccaaaatagcttatgaaaacagcttagagcttata 379  Q
    ||||||||||||||||||||||||||| ||||||||    
T  33931612 tccaaaatagcttatgaaaacagcttatagcttata 33931647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 408
Target Start/End: Complemental strand, 42592358 - 42592303
Alignment:
Q  353 gcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||||||||||||||||| |||||||||||||| || || |||  |||||||||||    
T  42592358 gcttatgaaaacagcttatagcttatatgaaaacaagttaacttaattttatcttt 42592303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 379
Target Start/End: Original strand, 42621393 - 42621452
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    |||| |||||||||||| | ||| |||| |||| ||||||||||||||||| ||||||||    
T  42621393 ttttcagcttattttcacaagttctccagaataacttatgaaaacagcttatagcttata 42621452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 5043608 - 5043666
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||||||||||||||| |||  |||||||||||||| | |||||||  |||||||||||    
T  5043608 atagcttatgaaaacaacttctagcttatatgaaaacagtttgactttattttatcttt 5043666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 6772444 - 6772478
Alignment:
Q  154 ttagggcatgtttagattgacttatttgagcttat 188  Q
    ||||||||||||| |||||||||||||||||||||    
T  6772444 ttagggcatgtttggattgacttatttgagcttat 6772478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 448
Target Start/End: Complemental strand, 9478321 - 9478223
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataa 448  Q
    |||||||| ||| ||||| || |||||||||||||| | ||||| |  |||||||||   |||| ||||| | |||||||||||| ||||||| |||||    
T  9478321 atagcttacgaacacagcatatagcttatatgaaaatattttgagtttattttatctactgttatagaaatagcttatacataaacacttatatgataa 9478223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 10286012 - 10285970
Alignment:
Q  219 ctgtttggattgttttatttgagcttatctattagcataagca 261  Q
    ||||||||||||| |||||| |||||||||||| |||||||||    
T  10286012 ctgtttggattgtcttatttaagcttatctatttgcataagca 10285970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 366
Target Start/End: Original strand, 33319822 - 33319876
Alignment:
Q  312 ataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacag 366  Q
    ||||||| |||| |||||||||||||| ||| ||||| |||| ||||||||||||    
T  33319822 ataagcttttttcagcttattttcataagttctccaagatagtttatgaaaacag 33319876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 35378443 - 35378489
Alignment:
Q  154 ttagggcatgtttagattgacttatttgagcttatttactagcataa 200  Q
    ||||||||||||| ||||| ||||||||||||||| || ||||||||    
T  35378443 ttagggcatgtttggattggcttatttgagcttatataatagcataa 35378489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 37448696 - 37448734
Alignment:
Q  162 tgtttagattgacttatttgagcttatttactagcataa 200  Q
    ||||||||||||||||||||||||||| ||| |||||||    
T  37448696 tgtttagattgacttatttgagcttatctaccagcataa 37448734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 370
Target Start/End: Complemental strand, 40279471 - 40279409
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    |||||||| || |||| | |||||||||||| ||| ||||| |||||||||||||||| ||||    
T  40279471 gtccataaactgttttcaacttattttcataagttctccaatatagcttatgaaaacaactta 40279409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 408
Target Start/End: Complemental strand, 43141893 - 43141835
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||||||||||||||| |||| |||||||||| ||| |||||||||  | |||||||||    
T  43141893 atagcttatgaaaacatcttatagcttatatggaaacaatttgactttactttatcttt 43141835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 376
Target Start/End: Original strand, 1893290 - 1893355
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagctt 376  Q
    |||||| |||||| |||||||||||| | ||| ||||| |||||||  |||||||||||| |||||    
T  1893290 cataagttattttcagcttattttcacaagttctccaagatagcttccgaaaacagcttatagctt 1893355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 428
Target Start/End: Original strand, 1939338 - 1939458
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagct-tatatgaaaagaatttgactcgattttatct 406  Q
    ||||||||||| |||| | ||||||| |||| | | ||||  ||||||||||||||||| ||| ||||  ||||||||| | ||| |||  |||||||||    
T  1939338 gtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaacag-ttatagctcaatatgaaaatagtttcactttattttatct 1939436  T
Q  407 ttagttacagaaacaacttata 428  Q
    || |||| ||||| ||||||||    
T  1939437 tttgttatagaaataacttata 1939458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 10646314 - 10646395
Alignment:
Q  327 cttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||||||||||| ||| || |||||||||||||||||  ||| | |  ||||| ||||| |||||||||  |||||||||||    
T  10646314 cttattttcataagttctctaaaatagcttatgaaaagggctcaaaatttataggaaaataatttgactttattttatcttt 10646395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 13869121 - 13869186
Alignment:
Q  328 ttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttga 393  Q
    ||||||||||  ||| ||||  ||| ||||||||||||||||| |||||| ||||||| |||||||    
T  13869121 ttattttcattagttctccaggataacttatgaaaacagcttatagcttagatgaaaataatttga 13869186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 385
Target Start/End: Complemental strand, 16353889 - 16353848
Alignment:
Q  344 tccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||    
T  16353889 tccaagatagcttataaaaacagcttatagcttatatgaaaa 16353848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 16398173 - 16398116
Alignment:
Q  313 taagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    |||||| |||| |||||||||||||| ||| ||||| ||| |||||||||| ||||||    
T  16398173 taagctgttttcagcttattttcataagttctccaacataacttatgaaaatagctta 16398116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 431
Target Start/End: Complemental strand, 28933846 - 28933765
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacat 431  Q
    ||||||||||||||||  ||| | |||| ||||||| ||||||| | |||||||||||| |||| | ||| | |||||||||    
T  28933846 atagcttatgaaaacaatttataacttaaatgaaaataatttgatttgattttatcttttgttatataaatagcttatacat 28933765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 419
Target Start/End: Original strand, 31740019 - 31740076
Alignment:
Q  362 aacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaa 419  Q
    |||| |||| |||||||||||||| | |||||||  |||||||||||||||| |||||    
T  31740019 aacaacttatagcttatatgaaaatagtttgactttattttatctttagttatagaaa 31740076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 433
Target Start/End: Complemental strand, 34339961 - 34339845
Alignment:
Q  317 ctatttttagcttattttcatatgttatccaa-aatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttaca 415  Q
    ||||||| ||||||||||| || | | ||||| |||| |||||||||| || ||| | |||||| ||||| |||||||||  ||||||||||| |||  |    
T  34339961 ctattttcagcttattttcttaagctctccaagaata-cttatgaaaatagtttataccttatacgaaaataatttgactttattttatcttttgtttta 34339863  T
Q  416 gaaacaacttatacataa 433  Q
     |||||||||| ||||||    
T  34339862 aaaacaacttacacataa 34339845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 363
Target Start/End: Original strand, 34652017 - 34652097
Alignment:
Q  282 agcttatagaaacaaacatataacacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaa 363  Q
    ||||||||||||||| | ||| ||| ||||||||||| |||| | ||||||| |||| | | ||||| ||||||||||||||    
T  34652017 agcttatagaaacaa-cttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 368
Target Start/End: Original strand, 35378541 - 35378598
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagct 368  Q
    |||||| |||||| |||||||||||||| | ||||||| || ||||| ||||||||||    
T  35378541 cataagttattttcagcttattttcataagctatccaagattgcttacgaaaacagct 35378598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 440
Target Start/End: Original strand, 36863650 - 36863762
Alignment:
Q  327 cttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaactta 426  Q
    |||||||||||| | | ||||| ||||||||||||||||  ||| | ||||||| ||||   |||||||  |||||||||||   || |||||||||||     
T  36863650 cttattttcataagctctccaagatagcttatgaaaacaatttataacttatataaaaattgtttgactttattttatcttttactagagaaacaacttc 36863749  T
Q  427 tacataaaaactta 440  Q
    || |||||||||||    
T  36863750 ta-ataaaaactta 36863762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 449
Target Start/End: Original strand, 42817394 - 42817523
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaa 419  Q
    ||||||||||| || |||| | | | || |||||||||||||||||| |||   |||||||||||| |  ||||||  ||||||||||| | || |||||    
T  42817394 tttttagcttacttccataagctcttcagaatagcttatgaaaacagtttattacttatatgaaaacagcttgacttcattttatcttttggtatagaaa 42817493  T
Q  420 caacttatacataaaaacttatacgataaa 449  Q
     ||| |||| || || ||||||| ||||||    
T  42817494 taacatataaatcaacacttatatgataaa 42817523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 750731 - 750664
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    |||||||| |||| ||||||||| |||| ||| ||||| |||||||||| |||||||| | ||||||||    
T  750731 cataagctgttttgagcttatttgcataagttctccaagatagcttatg-aaacagctcatagcttata 750664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 385
Target Start/End: Original strand, 938517 - 938593
Alignment:
Q  309 tccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    ||||||||| ||||| | |||||||||| | | | || || |||||||||||| || ||||| ||||||||||||||    
T  938517 tccataagccattttaaacttattttcagaagctctctaagatagcttatgaataccgcttatagcttatatgaaaa 938593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 419
Target Start/End: Original strand, 1493522 - 1493630
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttag 410  Q
    |||||| | |||| |||||||||||||| ||||  ||  ||  |||||||||||||| || |||||||||||||| || | ||||  ||||||||| | |    
T  1493522 cataagttgttttcagcttattttcataagttagtcaggatgacttatgaaaacagcatatagcttatatgaaaacaactagactttattttatctattg 1493621  T
Q  411 ttacagaaa 419  Q
    ||| |||||    
T  1493622 ttatagaaa 1493630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 391
Target Start/End: Complemental strand, 1625961 - 1625881
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    |||||| | |||| |||| |||||| || ||| ||||| |||||||||||||||| |||| | |||||| ||||| |||||    
T  1625961 cataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaacaacttataacttatacgaaaacaattt 1625881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 3458747 - 3458707
Alignment:
Q  161 atgtttagattgacttatttgagcttatttactagcataaa 201  Q
    ||||| ||||||||||||||||||||| ||||| |||||||    
T  3458747 atgttaagattgacttatttgagcttacttactggcataaa 3458707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 3673829 - 3673737
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttata 442  Q
    |||||| ||||||| | |||| | |||||||||||| ||||| |||  ||||||| ||| |||| ||||| |||| ||||||||  |||||||    
T  3673829 atagctaatgaaaaaaacttataacttatatgaaaacaatttaactttattttatattttgttatagaaataactaatacataagcacttata 3673737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 426
Target Start/End: Complemental strand, 6988137 - 6988061
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaactta 426  Q
    |||||||||||||||| |||| | ||  || ||||| |||||||||  ||||||||||| |||| ||||| ||||||    
T  6988137 atagcttatgaaaacaacttataactagtaagaaaataatttgactttattttatcttttgttatagaaaaaactta 6988061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 430
Target Start/End: Complemental strand, 39567921 - 39567845
Alignment:
Q  354 cttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttataca 430  Q
    ||||||||||||||||| ||||||| |  ||| ||||| |||  ||||||||||| |||| ||||| | ||||||||    
T  39567921 cttatgaaaacagcttatagcttatcttgaaacaatttaactttattttatcttttgttatagaaatatcttataca 39567845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 450
Target Start/End: Original strand, 40672872 - 40672944
Alignment:
Q  378 tatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataaat 450  Q
    |||||||| ||| |||||  |||||||||||  | | ||||| |||||||||||||||||||| | |||||||    
T  40672872 tatgaaaacaatgtgactttattttatcttttttcatagaaataacttatacataaaaacttaaatgataaat 40672944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 40759314 - 40759270
Alignment:
Q  217 gcctgtttggattgttttatttgagcttatctattagcataagca 261  Q
    ||||||||||||||  |||||||||||||||||||  ||||||||    
T  40759314 gcctgtttggattgccttatttgagcttatctattgacataagca 40759270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 42868397 - 42868437
Alignment:
Q  217 gcctgtttggattgttttatttgagcttatctattagcata 257  Q
    ||||||||||||||  ||||||||||||||||||| |||||    
T  42868397 gcctgtttggattgccttatttgagcttatctattggcata 42868437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 430
Target Start/End: Complemental strand, 43199436 - 43199356
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttataca 430  Q
    |||| ||||||||||| |||| |||||||| ||| | ||||| |||  ||||||||||| |||  ||||| ||||||||||    
T  43199436 atagtttatgaaaacaacttatagcttatacgaagataatttaactttattttatcttttgttgtagaaataacttataca 43199356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 366
Target Start/End: Complemental strand, 37273272 - 37273140
Alignment:
Q  233 ttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagctatttttagcttatt 332  Q
    |||||||| ||||| |||||||||||||| |||| ||||||||  | ||||||||| ||||| ||| ||| ||| ||||||||| | |||| | ||||||    
T  37273272 ttatttgaacttatttattagcataagcactggtgagactgtttgggagagcttatggaaac-aacttatgacatgtccataagttgttttcaacttatt 37273174  T
Q  333 ttcatatgttatccaaaatagcttatgaaaacag 366  Q
    | |||| ||| ||||| |||||||||||||||||    
T  37273173 tccataagttctccaagatagcttatgaaaacag 37273140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 441
Target Start/End: Original strand, 36783343 - 36783474
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttag 410  Q
    |||||||| |||| ||||||| ||||||  |  ||||| ||||||||||||||||||| | || ||||||||||| ||||| |||  ||||||||||| |    
T  36783343 cataagctgttttcagcttatattcataattgctccaatatagcttatgaaaacagctaatagtttatatgaaaacaattttactttattttatcttttg 36783442  T
Q  411 ttacagaaacaac-ttatacataaaaacttat 441  Q
     || ||||| | | ||||||||||| ||||||    
T  36783443 gtatagaaatagctttatacataaacacttat 36783474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 45541726 - 45541580
Alignment:
Q  216 agcctgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataa 315  Q
    |||||||||||||||  |||||||||||||| || | | |||| || | |||||||||||  ||||| |||||  |||||  | ||| ||| || |||||    
T  45541726 agcctgtttggattgacttatttgagcttatttaatggtataaacacttgtaagactgtttagaagaacttatgaaaacag-cttatgacatgttcataa 45541628  T
Q  316 gctatttttagcttattttcatatgttatccaaaatagcttatgaaaa 363  Q
    ||| |||| || ||||| ||||| ||||||||| ||||||||||||||    
T  45541627 gctgttttcaggttattctcataagttatccaagatagcttatgaaaa 45541580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 448
Target Start/End: Complemental strand, 38462303 - 38462205
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataa 448  Q
    ||||||||||||||||| ||| ||| |||||||||| | |||||||  ||||||||||| | || ||||| | |||||| ||||| ||||||| |||||    
T  38462303 atagcttatgaaaacagtttatagcatatatgaaaacagtttgactttattttatcttttggtatagaaatagcttataaataaacacttatatgataa 38462205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 432
Target Start/End: Complemental strand, 1395688 - 1395611
Alignment:
Q  355 ttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacata 432  Q
    |||||||||||| | | |||||||||||||| |||||||||  ||||||||||| |||| ||||| | ||||||||||    
T  1395688 ttatgaaaacagttcatagcttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacata 1395611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 393
Target Start/End: Complemental strand, 2923629 - 2923457
Alignment:
Q  220 tgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagcta 319  Q
    |||| ||||||  ||||| |||||||||||||  |||||| | | | |||||||||  ||||| ||||||||||| ||| ||  ||| ||||||||| ||    
T  2923629 tgttcggattgacttattcgagcttatctattgacataagtacttgaaagactgtttggaagaacttatagaaac-aacttactacatgtccataagtta 2923531  T
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttga 393  Q
    ||||||||||||||  |||   | | ||   |||||||||||||||||||| |||||| ||||||  |||||||    
T  2923530 tttttagcttatttatataatctcttcagtgtagcttatgaaaacagcttatagcttacatgaaagcaatttga 2923457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 428
Target Start/End: Original strand, 32095200 - 32095317
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttag 410  Q
    ||||||||| |||||||||||||| ||  ||| | ||| |||| |||||||||| ||||| || |||||  |||| ||||| |||  ||||||||||| |    
T  32095200 cataagctaattttagcttatttttattagtttttcaagatagattatgaaaacggcttatagtttatacaaaaacaatttaacttaattttatcttttg 32095299  T
Q  411 ttacagaaacaacttata 428  Q
    ||| ||||| ||||||||    
T  32095300 ttatagaaataacttata 32095317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 25459548 - 25459624
Alignment:
Q  219 ctgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaaca 295  Q
    |||||||||||| |||||||||||||||| | ||||||||||| | || ||| ||||  |||||||||| |||||||    
T  25459548 ctgtttggattgatttatttgagcttatcaactagcataagcacttgtgagattgtttggaagagcttagagaaaca 25459624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 365
Target Start/End: Original strand, 33972729 - 33972797
Alignment:
Q  297 acatataacacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaaca 365  Q
    |||||||||| |||||||| || |||| |||||||||||| | ||| ||||||||||||||| ||||||    
T  33972729 acatataacatgtccataaccttttttcagcttattttcacaagttctccaaaatagcttataaaaaca 33972797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 348 - 439
Target Start/End: Complemental strand, 37788884 - 37788794
Alignment:
Q  348 aaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaactt 439  Q
    |||||||||||||||||| |||| || ||||| ||||| |||| ||||  ||||||||||| |||| | ||| |||||||||||||| ||||    
T  37788884 aaatagcttatgaaaacaacttatagattatacgaaaataattggactttattttatcttttgttata-aaataacttatacataaacactt 37788794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 44747418 - 44747485
Alignment:
Q  312 ataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    |||||||  ||| |||||||||||||| ||| ||||| ||||||||||||||||||||| ||| ||||    
T  44747418 ataagcttctttcagcttattttcataagttttccaagatagcttatgaaaacagcttatagcctata 44747485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 315 - 378
Target Start/End: Original strand, 50600191 - 50600254
Alignment:
Q  315 agctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttat 378  Q
    |||| |||| |||||||||||||| ||| ||||| |||||| |||||||||||||| |||||||    
T  50600191 agctgttttcagcttattttcataagttctccaatatagctgatgaaaacagcttatagcttat 50600254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 466252 - 466202
Alignment:
Q  313 taagctatttttagcttattttcatatgttatccaaaatagcttatgaaaa 363  Q
    |||||| ||||||||||||||||||| ||| ||||| ||||||||||||||    
T  466252 taagctttttttagcttattttcataagttctccaacatagcttatgaaaa 466202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 408
Target Start/End: Complemental strand, 2201158 - 2201092
Alignment:
Q  342 tatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||||| |||||| |||||||||||||| |||||||||||||| | |||||||   ||||||||||    
T  2201158 tatccaagatagctaatgaaaacagcttatagcttatatgaaaacagtttgactttgttttatcttt 2201092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 14145959 - 14145877
Alignment:
Q  325 agcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    |||||||||||||| || |||||| |||||||||||||| | |||| ||| |||| ||||| ||||| |||  ||||||||||    
T  14145959 agcttattttcataagtaatccaagatagcttatgaaaataacttatagcatatacgaaaacaatttaactttattttatctt 14145877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 471
Target Start/End: Original strand, 24235726 - 24235852
Alignment:
Q  345 ccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacg 444  Q
    |||| |||||||||||||||| |||| |||||||||  ||| | |||||||  || |||||||| |||| ||||| |||||||||| ||   |||||       
T  24235726 ccaatatagcttatgaaaacaacttatagcttatattcaaatagtttgactttatattatcttttgttatagaaataacttatacacaagtgcttatgtt 24235825  T
Q  445 ataaatgcataattaagttgtttatcc 471  Q
    |||||  | ||||||||||||||||||    
T  24235826 ataaacacttaattaagttgtttatcc 24235852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 2719532 - 2719463
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagctta 377  Q
    ||||||||| | || | |||||||||||||| ||| ||||| ||||||||||||||||| ||| ||||||    
T  2719532 gtccataagttgttctcagcttattttcataagttctccaagatagcttatgaaaacagtttatagctta 2719463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 358
Target Start/End: Original strand, 4534291 - 4534431
Alignment:
Q  217 gcctgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataag 316  Q
    |||||||| ||||| ||||||||||||||||||||  |||||||  | |||| ||| ||  | |||| |||||||||| ||| |||||||||| | ||||    
T  4534291 gcctgtttcgattgatttatttgagcttatctattcacataagcccttgtaaaactatttggtagaggttatagaaac-aacttataacacgttcgtaag 4534389  T
Q  317 ctatttttagcttattttcatatgttatccaaaatagcttat 358  Q
     |  |||||||||||||   || | | |||||||||||||||    
T  4534390 ttgattttagcttatttctgtaaggtctccaaaatagcttat 4534431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 314 - 391
Target Start/End: Complemental strand, 21367725 - 21367648
Alignment:
Q  314 aagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    ||||| |||| |||||||||||||| ||| ||||| |||||||||||||||| |||| |  ||||| ||||| |||||    
T  21367725 aagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttatacattatacgaaaacaattt 21367648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 385
Target Start/End: Original strand, 33405197 - 33405250
Alignment:
Q  332 tttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    ||||||| ||| | ||| ||||||||||||||||||||| ||||||||||||||    
T  33405197 tttcataagttcttcaagatagcttatgaaaacagcttatagcttatatgaaaa 33405250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 309 - 429
Target Start/End: Original strand, 34254815 - 34254936
Alignment:
Q  309 tccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatat-gaaaagaatttgactcgattttatctt 407  Q
    ||||||||||| ||| ||||||||| |||| ||| |||| ||||||||||||||| || ||| |||| ||||  |||| | |||||||  |||||||| |    
T  34254815 tccataagctactttcagcttatttacataagttctccagaatagcttatgaaaatagtttatagctaatataaaaaacagtttgactttattttatcat 34254914  T
Q  408 tagttacagaaacaacttatac 429  Q
    | | |||||||| | |||||||    
T  34254915 ttgctacagaaatagcttatac 34254936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 398 - 471
Target Start/End: Complemental strand, 41159083 - 41159010
Alignment:
Q  398 attttatctttagttacagaaacaacttatacataaaaacttatacgataaatgcataattaagttgtttatcc 471  Q
    |||||||||||||||| || || |||||||||||||  |||||||||||||  |  ||||||||||| ||||||    
T  41159083 attttatctttagttataggaataacttatacataagcacttatacgataagcgtttaattaagttggttatcc 41159010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 449
Target Start/End: Original strand, 43116478 - 43116575
Alignment:
Q  352 agcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataaa 449  Q
    |||||||||||||  |||| ||||||||||||||   ||||| | |||||||||||| |||| ||||| | |||| ||||||| |||| || ||||||    
T  43116478 agcttatgaaaacgacttatagcttatatgaaaattgtttgatttgattttatcttttgttatagaaatagcttacacataaacacttgtatgataaa 43116575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 51929895 - 51929854
Alignment:
Q  217 gcctgtttggattgttttatttgagcttatctattagcataa 258  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  51929895 gcctgtttggattgacttatttgagcttatctattagcataa 51929854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 429
Target Start/End: Original strand, 21862175 - 21862303
Alignment:
Q  302 taacacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcg-att 400  Q
    ||||| ||||||||| | |||| ||||||||| |||| | | ||| | |||||| |||| |||  || | |||||||||||||| ||||||||| | |||    
T  21862175 taacatgtccataagttgttttcagcttatttccataagctctcccagatagctaatgagaactactcatagcttatatgaaaacaatttgacttgtatt 21862274  T
Q  401 ttatctttagttacagaaacaacttatac 429  Q
    |||||||| || | ||||||| |||||||    
T  21862275 ttatcttttgtaatagaaacagcttatac 21862303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 391
Target Start/End: Complemental strand, 52619064 - 52618984
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    ||||||||||||| | |||||||||| | | | | ||| ||||||| ||||||||||||| | |||||||||||| |||||    
T  52619064 cataagctattttcaccttattttcacaagctcttcaagatagcttgtgaaaacagcttataacttatatgaaaacaattt 52618984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 390
Target Start/End: Complemental strand, 5436304 - 5436241
Alignment:
Q  327 cttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatt 390  Q
    |||||||||||||||| ||||| ||||  |||||||||||| || | |||||||||||| ||||    
T  5436304 cttattttcatatgttctccaagatagtctatgaaaacagcatacaacttatatgaaaacaatt 5436241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 363
Target Start/End: Original strand, 16790384 - 16790439
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaa 363  Q
    ||||||||||| |||| || ||||||||||| | ||||||| ||||||||||||||    
T  16790384 gtccataagctgttttcagtttattttcataagctatccaagatagcttatgaaaa 16790439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 426
Target Start/End: Original strand, 23952159 - 23952230
Alignment:
Q  355 ttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaactta 426  Q
    |||||||||||||||| ||||||||  |||| | |||||||  ||||||||||| |||| ||||| ||||||    
T  23952159 ttatgaaaacagcttacagcttatacaaaaatactttgacttaattttatcttttgttatagaaataactta 23952230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 37689428 - 37689495
Alignment:
Q  346 caaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagtta 413  Q
    |||||||||||||||||| || ||| |||||||||||||| ||||| |||  | ||||||||| ||||    
T  37689428 caaaatagcttatgaaaatagtttatagcttatatgaaaataatttaactttactttatcttttgtta 37689495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 449
Target Start/End: Original strand, 40122801 - 40122899
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataaa 449  Q
    ||||||||| |||||| |||| ||||| |||||||| | |||||||  ||||||||||| ||||  |||| | |||||||||||  ||| ||||||||||    
T  40122801 atagcttataaaaacaacttatagctt-tatgaaaacagtttgactttattttatcttttgttattgaaatagcttatacataagtactgatacgataaa 40122899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 370
Target Start/End: Complemental strand, 41633509 - 41633362
Alignment:
Q  220 tgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagcta 319  Q
    ||||||||||| |||||||||||||||||||| ||| |  || |  | ||||| ||| | |||| ||||| |||||||   || ||| ||| ||||  |     
T  41633509 tgtttggattggtttatttgagcttatctattggcaaa--cacttatgagactattcaggagaggttataaaaacaaatc-atgacatgtctataaattg 41633413  T
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    |||| |||||||||||||| | | |||||||||||| ||||||||||||||    
T  41633412 ttttcagcttattttcataagctctccaaaatagctgatgaaaacagctta 41633362  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 370
Target Start/End: Original strand, 2128256 - 2128326
Alignment:
Q  300 tataacacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    ||||||| || |||||||| |||| |||||||||||||| ||| |  || || ||||||||||||||||||    
T  2128256 tataacatgttcataagctgttttcagcttattttcatacgttctaaaagatggcttatgaaaacagctta 2128326  T

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Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 427
Target Start/End: Original strand, 10101527 - 10101601
Alignment:
Q  353 gcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttat 427  Q
    ||||||||||||| |||  | |||||||||||| ||||| |||  ||||||||||| |||| ||||| |||||||    
T  10101527 gcttatgaaaacaacttttatcttatatgaaaacaatttaactttattttatcttttgttatagaaataacttat 10101601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 427
Target Start/End: Original strand, 10212452 - 10212526
Alignment:
Q  353 gcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttat 427  Q
    ||||||||||||| |||  | |||||||||||| ||||| |||  ||||||||||| |||| ||||| |||||||    
T  10212452 gcttatgaaaacaacttttatcttatatgaaaacaatttaactttattttatcttttgttatagaaataacttat 10212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 23315649 - 23315591
Alignment:
Q  349 aatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    ||||||||||| ||||| |||| ||| |||||||||| |||||||||  ||||||||||    
T  23315649 aatagcttatggaaacatcttatagcctatatgaaaacaatttgactttattttatctt 23315591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 428
Target Start/End: Original strand, 24887331 - 24887409
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttata 428  Q
    ||||||||||||||||||||  |||||||||||| | | |||||||  ||||||||| | |||| ||||| | ||||||    
T  24887331 atagcttatgaaaacagcttttagcttatatgaatacagtttgactttattttatctattgttatagaaatagcttata 24887409  T

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Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 377
Target Start/End: Original strand, 28622008 - 28622074
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagctta 377  Q
    |||||||| |||| || ||||||||||| ||| || || |||| |||||||||||||||| ||||||    
T  28622008 cataagctgttttcaggttattttcataagttctcgaagatagtttatgaaaacagcttatagctta 28622074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 369
Target Start/End: Complemental strand, 32582789 - 32582747
Alignment:
Q  327 cttattttcatatgttatccaaaatagcttatgaaaacagctt 369  Q
    ||||||| |||| ||| ||||||||||||||||||||||||||    
T  32582789 cttatttccataagttctccaaaatagcttatgaaaacagctt 32582747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 433
Target Start/End: Original strand, 48364928 - 48365010
Alignment:
Q  351 tagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataa 433  Q
    ||||| ||||||||| ||||  || || ||||||| |||||||||  ||||||||||| ||||  |||| |||||||||||||    
T  48364928 tagctaatgaaaacaacttatggcgtaaatgaaaacaatttgactttattttatcttttgttatcgaaataacttatacataa 48365010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 50760746 - 50760704
Alignment:
Q  158 ggcatgtttagattgacttatttgagcttatttactagcataa 200  Q
    |||||||||||||||||||||||||||| || ||| |||||||    
T  50760746 ggcatgtttagattgacttatttgagctcatctacaagcataa 50760704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 584196 - 584159
Alignment:
Q  163 gtttagattgacttatttgagcttatttactagcataa 200  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  584196 gtttggattgacttatttgagcttatctactagcataa 584159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 191
Target Start/End: Original strand, 9832674 - 9832703
Alignment:
Q  162 tgtttagattgacttatttgagcttattta 191  Q
    ||||||||||||||||||||||||||||||    
T  9832674 tgtttagattgacttatttgagcttattta 9832703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 385
Target Start/End: Original strand, 14548739 - 14548804
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    |||| ||||||||| |||| | | |||| |||| |||||||||||| |||| ||||||||||||||    
T  14548739 ttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaaa 14548804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 385
Target Start/End: Complemental strand, 21865604 - 21865563
Alignment:
Q  344 tccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    ||||||||||||||| |||||| |||| ||||||||||||||    
T  21865604 tccaaaatagcttatcaaaacaacttatagcttatatgaaaa 21865563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 385
Target Start/End: Original strand, 25182994 - 25183071
Alignment:
Q  309 tccataagctattttt-agcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    |||||||||||||||| ||| ||||| || |  || ||||  ||||||||||||||||||||| |||| |||||||||    
T  25182994 tccataagctatttttcagcatatttccacaaattttccatgatagcttatgaaaacagcttatagctcatatgaaaa 25183071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 379
Target Start/End: Complemental strand, 30443951 - 30443886
Alignment:
Q  314 aagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    ||||| |||| |||||||||||||| ||| ||||| |||| |||| ||||||||||| ||| ||||    
T  30443951 aagcttttttcagcttattttcataagttctccaatatagtttataaaaacagcttatagcatata 30443886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 408
Target Start/End: Original strand, 46886718 - 46886796
Alignment:
Q  328 ttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||||||| | ||| ||||| ||||||||||||||||||||| |||| |||  |||| ||||| |||  |||||||||||    
T  46886718 ttattttcaaaagttctccaagatagcttatgaaaacagcttatagctcatacaaaaataatttaact--attttatcttt 46886796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 201
Target Start/End: Original strand, 48364834 - 48364871
Alignment:
Q  164 tttagattgacttatttgagcttatttactagcataaa 201  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  48364834 tttagattgacttatttgagtttatttactagtataaa 48364871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 48807848 - 48807811
Alignment:
Q  164 tttagattgacttatttgagcttatttactagcataaa 201  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  48807848 tttagattgagttatttaagcttatttactagcataaa 48807811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 53762310 - 53762351
Alignment:
Q  217 gcctgtttggattgttttatttgagcttatctattagcataa 258  Q
    ||||| |||||||| |||||||||||||||||| ||||||||    
T  53762310 gcctgcttggattggtttatttgagcttatctactagcataa 53762351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 901987 - 901931
Alignment:
Q  309 tccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaaca 365  Q
    |||||||||| |||| | |||||||||||| ||| ||||| ||||||||| ||||||    
T  901987 tccataagcttttttcaacttattttcataagttctccaatatagcttataaaaaca 901931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 3775770 - 3775846
Alignment:
Q  220 tgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaa 296  Q
    |||||||||||  ||||||||| ||||||| | |||||| || | || ||||||||  | |||||||||||||||||    
T  3775770 tgtttggattgccttatttgagtttatctactggcataaacaattgttagactgtttggcagagcttatagaaacaa 3775846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 372 - 471
Target Start/End: Original strand, 4534425 - 4534525
Alignment:
Q  372 agcttatatgaaaagaatttgactcgattttatcttt-agttacagaaacaacttatacataaaaacttatacgataaatgcataattaagttgtttatc 470  Q
    ||||||||| |||| |||| ||||  ||| ||||||| | ||| | ||| ||||||||| |||  |||||||| |||| ||| |||||||||||||||||    
T  4534425 agcttatattaaaacaattcgactttattatatcttttatttatataaataacttatacgtaagcacttatactataagtgcttaattaagttgtttatc 4534524  T
Q  471 c 471  Q
    |    
T  4534525 c 4534525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 434
Target Start/End: Original strand, 4990629 - 4990689
Alignment:
Q  374 cttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaa 434  Q
    |||||||||||| | |||||||  |||||||| || | |||||||| ||||||||||||||    
T  4990629 cttatatgaaaaaagtttgacttcattttatcctttgatacagaaataacttatacataaa 4990689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 390
Target Start/End: Original strand, 20874352 - 20874392
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatt 390  Q
    ||||||||||||||||||||| || ||||||||||| ||||    
T  20874352 atagcttatgaaaacagcttatagtttatatgaaaacaatt 20874392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 20880537 - 20880469
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    |||||||| |||| |||||||||||||| ||| ||||| ||||||| | ||||||| ||| ||| ||||    
T  20880537 cataagcttttttgagcttattttcataagttctccaatatagcttttaaaaacagtttatagcatata 20880469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 394
Target Start/End: Original strand, 21872319 - 21872363
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgac 394  Q
    |||||||||||||||| |||| ||||||||| |||| ||||||||    
T  21872319 atagcttatgaaaacaacttatagcttatatcaaaaaaatttgac 21872363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 22214735 - 22214827
Alignment:
Q  356 tatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataa 448  Q
    |||||||||| |||| || ||||||||| | ||||| |||  |||||||| || |||| ||||| || |||||||||   |||||||||||||    
T  22214735 tatgaaaacaacttataggttatatgaatacaatttcactttattttatcctttgttatagaaataatttatacatacgcacttatacgataa 22214827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 39602235 - 39602287
Alignment:
Q  327 cttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    |||||||||||| ||| || || ||||||||||||||||||||| | ||||||    
T  39602235 cttattttcataagttctcaaagatagcttatgaaaacagcttataacttata 39602287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 43046821 - 43046789
Alignment:
Q  156 agggcatgtttagattgacttatttgagcttat 188  Q
    ||||||||||||||||||||||||||| |||||    
T  43046821 agggcatgtttagattgacttatttgaacttat 43046789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 43948815 - 43948751
Alignment:
Q  210 agactaagcctgtttggattgttttatttgagcttatctattagcataagcattggtaagactgt 274  Q
    |||||||||||||||||||||  | ||||||| | |||||||  |||||||||| || |||||||    
T  43948815 agactaagcctgtttggattggctaatttgagttaatctattgtcataagcatttgtgagactgt 43948751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 51929897 - 51929853
Alignment:
Q  157 gggcatgtttagattgacttatttgagcttatttactagcataaa 201  Q
    |||| ||||| ||||||||||||||||||||| || |||||||||    
T  51929897 gggcctgtttggattgacttatttgagcttatctattagcataaa 51929853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 425
Target Start/End: Complemental strand, 4622157 - 4622040
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    ||||||||||| ||||||||||||||||| | | | ||||| ||||| |||| |||||||||| |||||||||||||||| ||||| |  |||| |||||    
T  4622157 gtccataagctgtttttagcttattttcacaagctctccaagatagcatatggaaacagcttatagcttatatgaaaagagtttgaattcatttgatctt 4622058  T
Q  408 tagttacagaaacaactt 425  Q
    | |||| ||||| |||||    
T  4622057 ttgttatagaaataactt 4622040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 449
Target Start/End: Original strand, 44032005 - 44032146
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    |||||||||||||||| |||| |||| |||| | | | ||| ||| |||| ||||| || ||| |||||||||||||| |||||||||  |||||| |||    
T  44032005 gtccataagctattttcagctaatttccataagctcttcaagataacttaagaaaatagtttatagcttatatgaaaacaatttgactttattttagctt 44032104  T
Q  408 tagttacagaaacaacttatacataaaaacttatacgataaa 449  Q
    | |||| ||||||  |||||||||||| ||||||| ||||||    
T  44032105 ttgttatagaaacggcttatacataaacacttatatgataaa 44032146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 351 - 430
Target Start/End: Complemental strand, 49517091 - 49517012
Alignment:
Q  351 tagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttataca 430  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||  ||||||||||| |||| ||||| ||||||||||    
T  49517091 tagcttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaataacttataca 49517012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 434
Target Start/End: Original strand, 48830123 - 48830208
Alignment:
Q  349 aatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaa 434  Q
    |||||||||||||||||| ||| |||||||||||||| | |||||||  ||||||||||| || | ||||| ||||||||||||||    
T  48830123 aatagcttatgaaaacagtttatagcttatatgaaaatagtttgactttattttatctttggtaatagaaataacttatacataaa 48830208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 404
Target Start/End: Complemental strand, 9656711 - 9656618
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttat 404  Q
    |||||||| |||| ||||||||||||||  | |||||  |||||||||||| |||||||| |||||||||||||| ||||| |||  |||||||    
T  9656711 cataagctgttttgagcttattttcataattcatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttat 9656618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 7137007 - 7137075
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    |||||| |||||| |||||||||||||| ||| ||||| ||||||||||||||||||||| || |||||    
T  7137007 cataagttattttcagcttattttcataagttctccaagatagcttatgaaaacagcttatagattata 7137075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 304 - 408
Target Start/End: Original strand, 7218076 - 7218180
Alignment:
Q  304 acacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgatttta 403  Q
    |||||| || ||||| |||| | |||||||||||| ||| ||||  |||| ||||||||||| |||| |||||||||||||| |||||||||  ||||||    
T  7218076 acacgttcacaagctgttttcaacttattttcataagttctccaggataggttatgaaaacaacttatagcttatatgaaaacaatttgactttatttta 7218175  T
Q  404 tcttt 408  Q
     ||||    
T  7218176 ccttt 7218180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 408
Target Start/End: Original strand, 31517672 - 31517846
Alignment:
Q  233 ttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagctatttttagcttatt 332  Q
    |||||||||||||| || | ||||||||| | || ||||||||  | ||| |||||  |||||| |  || ||| || |||||||| |||| ||||||||    
T  31517672 ttatttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaa-ctcatgacatgttcataagctgttttcagcttatt 31517770  T
Q  333 ttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||||| | | ||||| | || ||||||| |||||||| |||||||||||||  ||||| |||  |||||||||||    
T  31517771 ttcataagctctccaagacagattatgaagacagcttatagcttatatgaaatcaatttaactttattttatcttt 31517846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 16322910 - 16322813
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||||| | |||||||||||||| |||| | | | ||||||||| ||||||||||||||| | ||| |||||||| | |||||||  |||||||||||    
T  16322910 cataagttgtttttagcttatttccataagctcttcaaaatagcctatgaaaacagcttataacttctatgaaaatagtttgactatattttatcttt 16322813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 320 - 408
Target Start/End: Original strand, 23544657 - 23544746
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttag-agcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||||||| ||| |||||| ||| ||| | ||||||||||||||||| |||  |||||||||||||| |||||||||  |||||||||||    
T  23544657 tttttagcgtatgttcataagttttccgagatagcttatgaaaacagtttaatagcttatatgaaaacaatttgacttaattttatcttt 23544746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 384
Target Start/End: Original strand, 28482242 - 28482315
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaa 384  Q
    ||||| ||||||||||||||||||| || | | ||||| ||| ||||| ||||||||||| |||||||||||||    
T  28482242 cataaactatttttagcttattttcgtaagctctccaagataacttataaaaacagcttatagcttatatgaaa 28482315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 413
Target Start/End: Complemental strand, 30371212 - 30371107
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    ||||||||| | |||| |||||||||  ||| | | ||||||||  |||||||||||| |||| |||||||||||||| ||||||| |  ||||||||||    
T  30371212 gtccataagttgttttcagcttatttcaatacgctctccaaaatgtcttatgaaaacaacttatagcttatatgaaaacaatttgagtttattttatctt 30371113  T
Q  408 tagtta 413  Q
    | ||||    
T  30371112 ttgtta 30371107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 51695504 - 51695600
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||||||||||| ||||||||||||||  || ||||| |||||||||||||||| || | | |||||| ||||| ||||| |||  |||||||||||    
T  51695504 cataagctattttcagcttattttcataaattctccaagatagcttatgaaaacatctgataacttatacgaaaacaattt-actttattttatcttt 51695600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 10199417 - 10199533
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttag 410  Q
    |||||| | |||| |||||||||||||| | | || ||||||||||||||||| ||||||  | ||||| ||||| | |||||||  ||||||||||  |    
T  10199417 cataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaaaagcttatcgattatacgaaaatagtttgactttattttatcttggg 10199516  T
Q  411 ttacagaaacaacttat 427  Q
    ||| ||||| |||||||    
T  10199517 ttatagaaataacttat 10199533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 17269272 - 17269180
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttata 442  Q
    |||||||||||||||| ||||  ||||||||||||| |||||||||  |||||  |||| |||  ||||| |||||||||||||  |||||||    
T  17269272 atagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttcacttttgttctagaaataacttatacataagcacttata 17269180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 27820346 - 27820414
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    ||||||||||||| ||||||||||||||  || ||||| ||||||||| |||||||| || ||||||||    
T  27820346 cataagctattttcagcttattttcataaattctccaagatagcttataaaaacagcatatagcttata 27820414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 34290297 - 34290229
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    |||||| | |||| |||||||||||||| ||| | ||| ||||||||||||||||||||| ||||||||    
T  34290297 cataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagcttata 34290229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 370
Target Start/End: Complemental strand, 35179201 - 35179141
Alignment:
Q  310 ccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    ||||||||| |||| |||||||||||||| ||| |||| |||| |||||||||||||||||    
T  35179201 ccataagctgttttcagcttattttcataagttctccataataacttatgaaaacagctta 35179141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 45975751 - 45975683
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    |||||||| |||| ||||||||||||||  || ||||| ||||||||||||||||||||  ||||||||    
T  45975751 cataagctgttttcagcttattttcataaattctccaagatagcttatgaaaacagcttgtagcttata 45975683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 218 - 385
Target Start/End: Original strand, 6231733 - 6231899
Alignment:
Q  218 cctgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagc 317  Q
    |||||||| |||| |||||||||| ||||||| |||||||| |||| || ||| ||||| | | |||| || |||||||  | || ||| |||||||| |    
T  6231733 cctgtttgaattggtttatttgaggttatctactagcataaacatttgtgagattgttctggatagctcatggaaacaacta-atgacatgtccataaac 6231831  T
Q  318 tatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    | |||| |||||||||  ||| ||| | ||   ||||||| |||||||||||| || |||||||||||    
T  6231832 tgttttcagcttatttctataagttcttcaggttagcttacgaaaacagcttatagattatatgaaaa 6231899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 395
Target Start/End: Original strand, 25006076 - 25006127
Alignment:
Q  344 tccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgact 395  Q
    ||||| |||||||||||||||| |||| |||||||||||||| |||||||||    
T  25006076 tccaagatagcttatgaaaacaacttatagcttatatgaaaacaatttgact 25006127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 395
Target Start/End: Complemental strand, 15361736 - 15361690
Alignment:
Q  349 aatagcttatgaaaacagcttagagcttatatgaaaagaatttgact 395  Q
    |||| ||||||||||||||||| |||||||||||||| |||||||||    
T  15361736 aatatcttatgaaaacagcttatagcttatatgaaaataatttgact 15361690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 27738228 - 27738286
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||||||||||||||  ||| |||||||||||||| |||||||||  |||||||||||    
T  27738228 atagcttatgaaaacaaattatagcttatatgaaaacaatttgactttattttatcttt 27738286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 413
Target Start/End: Original strand, 28467356 - 28467418
Alignment:
Q  351 tagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagtta 413  Q
    ||||||||||||||| |||  |||||||||||||| |||||||||  ||||||||||| ||||    
T  28467356 tagcttatgaaaacaacttgtagcttatatgaaaataatttgactttattttatcttttgtta 28467418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 42556525 - 42556563
Alignment:
Q  162 tgtttagattgacttatttgagcttatttactagcataa 200  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  42556525 tgtttagattgacttatttgagcttatatactagcataa 42556563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 370
Target Start/End: Complemental strand, 4576852 - 4576807
Alignment:
Q  325 agcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    |||||||||||||| ||||| ||| |||||||||||||||||||||    
T  4576852 agcttattttcataagttattcaatatagcttatgaaaacagctta 4576807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 411
Target Start/End: Original strand, 33204436 - 33204497
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagt 411  Q
    ||||||||||||||||||||| |||||||| ||||| || || |||  ||||||||||||||    
T  33204436 atagcttatgaaaacagcttacagcttatacgaaaataaattaactttattttatctttagt 33204497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 39603842 - 39603899
Alignment:
Q  313 taagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    ||||||||||| |||||||||||||| | ||||||||||||| ||| |||||| ||||    
T  39603842 taagctattttcagcttattttcataagctatccaaaatagcatataaaaacaactta 39603899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 49888824 - 49888731
Alignment:
Q  315 agctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||||||||  ||||||||||||| ||| || || |||||||||||||||| || | |||||||| ||||| ||||  |||  |||||||||||    
T  49888824 agctattttcggcttattttcataagttctctaagatagcttatgaaaacaactaatagcttatacgaaaacaattaaactttattttatcttt 49888731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 440
Target Start/End: Complemental strand, 4200289 - 4200161
Alignment:
Q  312 ataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagt 411  Q
    ||||||| |||| |||||||||||||| |   ||||  ||| |||| |||||||   || |||||||||||||| || ||||||  ||||||||||| ||    
T  4200289 ataagctgttttaagcttattttcataagccctccaggatatcttacgaaaacaatatatagcttatatgaaaacaacttgactttattttatcttttgt 4200190  T
Q  412 tacagaaacaacttatacataaaaactta 440  Q
    || | ||| |||||||| ||||| |||||    
T  4200189 tataaaaataacttatatataaacactta 4200161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 395
Target Start/End: Complemental strand, 6292554 - 6292470
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgact 395  Q
    |||||||| |||| |||||||||||||| | | |||||||||| ||| ||||| |||||| |  |||| |||||| |||||||||    
T  6292554 cataagctgttttcagcttattttcataagctctccaaaatagtttacgaaaatagcttataagttatgtgaaaataatttgact 6292470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 12763475 - 12763419
Alignment:
Q  220 tgtttggattgttttattt-gagcttatctattagcataagcattggtaagactgtt 275  Q
    |||||||||||  |||||| ||| ||||||||||||||||||||| |||||||||||    
T  12763475 tgtttggattggcttattttgagtttatctattagcataagcatttgtaagactgtt 12763419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 439
Target Start/End: Complemental strand, 15360899 - 15360827
Alignment:
Q  367 cttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaactt 439  Q
    |||| |||||||||||||| | |||||||  ||||||||||| |||| ||||| |||| ||||||||| ||||    
T  15360899 cttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaataactaatacataaacactt 15360827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 407
Target Start/End: Original strand, 24915060 - 24915156
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    |||||||| |||| | |||||||||| | ||| ||||| | ||||||||||||||||||| ||| ||||  |||| ||||| |||  ||||||||||    
T  24915060 cataagcttttttcaacttattttcacaagttctccaagacagcttatgaaaacagcttatagcatatacaaaaacaatttaactttattttatctt 24915156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 428
Target Start/End: Complemental strand, 25479633 - 25479525
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaa 419  Q
    |||| |||||||||||||| | | || |  |||||||||||||||| |||| ||| |||||||| | ||||||||   ||||||||||| |||| |||||    
T  25479633 ttttcagcttattttcataagctctctaggatagcttatgaaaacaacttatagcctatatgaagacaatttgacgttattttatctttggttatagaaa 25479534  T
Q  420 caacttata 428  Q
     | ||||||    
T  25479533 gatcttata 25479525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 384
Target Start/End: Original strand, 27963376 - 27963452
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaa 384  Q
    ||||||||| | ||||||||||||||  ||| | | |||| ||||||||||||||||| |||||| ||| |||||||    
T  27963376 gtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaacaacttagaacttttatgaaa 27963452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 385
Target Start/End: Original strand, 28689458 - 28689537
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagct--tatgaaaacagcttagagcttatatgaaaa 385  Q
    ||||||||| | |||| |||||||||||||| | | ||||| ||||||  |||||||||| |||| ||||||||||||||    
T  28689458 gtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttatatgaaaa 28689537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 380
Target Start/End: Original strand, 38867849 - 38867909
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatat 380  Q
    ||||||||||||||||||| ||| | ||| ||| ||||||||||||| ||| |||||||||    
T  38867849 tttttagcttattttcataagttcttcaagataacttatgaaaacagtttaaagcttatat 38867909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 421
Target Start/End: Original strand, 49365818 - 49365878
Alignment:
Q  361 aaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaaca 421  Q
    |||||| ||| ||||| |||||||| |||||||||| ||||||||||| ||||| ||||||    
T  49365818 aaacagtttatagcttgtatgaaaacaatttgactctattttatcttttgttactgaaaca 49365878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 4202227 - 4202298
Alignment:
Q  400 tttatctttagttacagaaacaacttatacataaaaacttatacgataaatgcataattaagttgtttatcc 471  Q
    ||||||||| |||| ||||| ||||||||| |||  ||||||| |||||| || ||||||||||| ||||||    
T  4202227 tttatcttttgttatagaaataacttatacttaagcacttatatgataaacgcttaattaagttgcttatcc 4202298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 11696021 - 11695975
Alignment:
Q  153 attagggcatgtttagattgacttatttgagcttatttactagcataa 200  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  11696021 attagggc-tgtttggattgacttatttgagcttatttattagcataa 11695975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 384
Target Start/End: Complemental strand, 25944491 - 25944420
Alignment:
Q  313 taagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaa 384  Q
    ||||||||||| ||||||||||||||  | |||||  ||||||||||||||| ||||| | |||| ||||||    
T  25944491 taagctattttcagcttattttcataattaatccaggatagcttatgaaaaccgcttataacttacatgaaa 25944420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 433
Target Start/End: Original strand, 33527199 - 33527278
Alignment:
Q  354 cttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataa 433  Q
    ||||||||||||||||| || ||||||||||| | |||||||  ||||||||||| |||  ||||| | ||||| |||||    
T  33527199 cttatgaaaacagcttatagattatatgaaaacagtttgactgtattttatcttttgttttagaaatagcttattcataa 33527278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 363
Target Start/End: Complemental strand, 38189816 - 38189773
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaa 363  Q
    |||||||||||| |||||| |||||||||||||||||| |||||    
T  38189816 tttttagcttatcttcataagttatccaaaatagcttaagaaaa 38189773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 383
Target Start/End: Original strand, 39270431 - 39270506
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaa 383  Q
    ||||||||||| |||| | |||||||||||||| | || |   |||||||||||||||||||| | ||||||||||    
T  39270431 gtccataagctgttttcaacttattttcatatgctctctatggtagcttatgaaaacagcttatatcttatatgaa 39270506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 1255479 - 1255537
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||||| |||||||||||||| | ||| ||||||||||||||||||  |||| ||||||    
T  1255479 atagctaatgaaaacagcttataacttgtatgaaaagaatttgacttcatttcatcttt 1255537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 378
Target Start/End: Complemental strand, 2294975 - 2294905
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttat 378  Q
    ||||||||||| |||| | ||||||||| || ||| ||||| |||| ||||||||| |||||| |||||||    
T  2294975 gtccataagctgttttcaccttattttcgtaagttctccaagatagtttatgaaaatagcttatagcttat 2294905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 296
Target Start/End: Original strand, 4549462 - 4549536
Alignment:
Q  222 tttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaa 296  Q
    |||||||||  ||||||||| ||||||| | |||||||||||  | ||||||||  | |||||||||||||||||    
T  4549462 tttggattggcttatttgagattatctactggcataagcatttctgagactgtttgggagagcttatagaaacaa 4549536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 5421968 - 5422026
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||||||| |||||| |||| |||||||| ||||| |||||||||  |||||||||||    
T  5421968 atagcttatcaaaacaacttatagcttataagaaaacaatttgactatattttatcttt 5422026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 367
Target Start/End: Original strand, 16144981 - 16145035
Alignment:
Q  313 taagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagc 367  Q
    |||||||||||||| ||||||||||| ||||| ||| |||| |||||||| ||||    
T  16144981 taagctatttttaggttattttcataagttattcaagatagtttatgaaagcagc 16145035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 395
Target Start/End: Original strand, 25005808 - 25005890
Alignment:
Q  313 taagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgact 395  Q
    |||| |||||| ||||| |||| ||| | | ||||  |||||||||||||||| |||| |||||||||||||| || ||||||    
T  25005808 taagatattttaagcttgtttttataagctctccaggatagcttatgaaaacaacttatagcttatatgaaaacaagttgact 25005890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 198
Target Start/End: Complemental strand, 28467586 - 28467548
Alignment:
Q  160 catgtttagattgacttatttgagcttatttactagcat 198  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  28467586 catgtttggattgacttatttgagtttatttactagcat 28467548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 440
Target Start/End: Complemental strand, 32958678 - 32958584
Alignment:
Q  346 caaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaactta 440  Q
    |||||||| |||||||||| | ||| ||||||| |||||| | |||||||  ||||||||||| || | ||||| | ||||||| |||| |||||    
T  32958678 caaaatagtttatgaaaactgtttatagcttatctgaaaatagtttgacttaattttatctttggtgatagaaagagcttatacgtaaatactta 32958584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 37631475 - 37631517
Alignment:
Q  217 gcctgtttggattgttttatttgagcttatctattagcataag 259  Q
    ||||||||||||||  ||||||||||| |||||||||||||||    
T  37631475 gcctgtttggattggcttatttgagctcatctattagcataag 37631517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 366
Target Start/End: Original strand, 41195203 - 41195257
Alignment:
Q  312 ataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacag 366  Q
    ||||||| |||| |||||||||||||| ||| ||||| |||| ||||||||||||    
T  41195203 ataagcttttttcagcttattttcataagttctccaagatagtttatgaaaacag 41195257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 408
Target Start/End: Complemental strand, 1432564 - 1432479
Alignment:
Q  323 ttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||||||| ||||||| ||| ||||| |||| |||||||||||  ||| ||||||||  |||| ||||  |||| |||||||||||    
T  1432564 ttagcttactttcataagttctccaagatagtttatgaaaacaatttatagcttataaaaaaacaattgaactctattttatcttt 1432479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 379
Target Start/End: Complemental strand, 2778040 - 2777885
Alignment:
Q  222 tttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagctatt 321  Q
    |||||||||  |||||| |||||||||||| |||||||  ||| | ||||||||  | ||| ||||| ||||| ||| ||| ||   | |||||||  ||    
T  2778040 tttggattggcttattttagcttatctatttgcataagttttg-tgagactgtttaggagaacttat-gaaaccaacttatgacgtattcataagccgtt 2777943  T
Q  322 tttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    || |||||||||||||| ||| |||||  || ||||| ||||||||||| ||||||||    
T  2777942 ttcagcttattttcataagttctccaagttaacttattaaaacagcttatagcttata 2777885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 408
Target Start/End: Original strand, 5592734 - 5592791
Alignment:
Q  351 tagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||||||||||||| |||| ||||||||||| || |||| ||||  |||||||||||    
T  5592734 tagcttatgaaaacaacttatagcttatatgacaacaattcgactttattttatcttt 5592791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 384
Target Start/End: Complemental strand, 6775048 - 6774976
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaa 384  Q
    |||||||| |||| ||||||||| | |||||| | ||| ||||||| ||||||||||||  |||||||||||||    
T  6775048 cataagctgttttcagcttatttacttatgttcttcaagatagcttgtgaaaacagctt-tagcttatatgaaa 6774976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 433
Target Start/End: Complemental strand, 7472363 - 7472251
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaa 419  Q
    |||| |||||||||||||| | | ||||| |||||||||| |||||||||| || |||||  |||| ||||| |||  ||| ||||||| |||| |||||    
T  7472363 ttttcagcttattttcataagctctccaagatagcttatggaaacagcttatagattatacaaaaacaatttaact-tattatatcttttgttatagaaa 7472265  T
Q  420 caacttatacataa 433  Q
     | |||||| ||||    
T  7472264 tagcttataaataa 7472251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 363
Target Start/End: Complemental strand, 7941664 - 7941615
Alignment:
Q  314 aagctatttttagcttattttcatatgttatccaaaatagcttatgaaaa 363  Q
    |||||||||| | |||||||||||| ||| ||| ||||||||||||||||    
T  7941664 aagctattttcaacttattttcataagttctccgaaatagcttatgaaaa 7941615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 24279898 - 24279861
Alignment:
Q  164 tttagattgacttatttgagcttatttactagcataaa 201  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  24279898 tttagattgtcttatttgaacttatttactagcataaa 24279861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 391
Target Start/End: Complemental strand, 26630521 - 26630444
Alignment:
Q  314 aagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    ||||| |||| || |||||| |||||||| ||||  ||||| ||| ||||||| ||| |||||||||||||| |||||    
T  26630521 aagcttttttaagtttatttccatatgttctccaggatagcgtatcaaaacagtttatagcttatatgaaaacaattt 26630444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 381
Target Start/End: Original strand, 27887136 - 27887197
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatg 381  Q
    ||||||||||||||| ||||| | ||||  |||| ||||||||||| |||| ||||||||||    
T  27887136 tttttagcttatttttatatgctctccatgatagtttatgaaaacaacttatagcttatatg 27887197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 471
Target Start/End: Original strand, 47002922 - 47003043
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataaa 449  Q
    ||||||||||||||||  ||  | ||| ||| |||| ||||| |||  |||||||||||  |||  |||| || |||| |||||| |||||||| ||| |    
T  47002922 atagcttatgaaaacaatttctaacttgtataaaaacaatttaactttattttatcttttattatcgaaataatttatgcataaacacttatactataga 47003021  T
Q  450 tgcataattaagttgtttatcc 471  Q
    ||| ||||||| ||||||||||    
T  47003022 tgcttaattaaattgtttatcc 47003043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 1662722 - 1662686
Alignment:
Q  164 tttagattgacttatttgagcttatttactagcataa 200  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  1662722 tttagattggcttatttgagcttatctactagcataa 1662686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 3224487 - 3224343
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    ||||||||| | || | |||||||||||||| ||| || | |||||||||| |||||| | || ||||||||||||   |||||||||  | || ||| |    
T  3224487 gtccataagttgttctcagcttattttcataagttctctagaatagcttataaaaacaccctatagcttatatgaattcaatttgactttacttgatcct 3224388  T
Q  408 tagttacagaaacaacttatacataaaaacttatacgataaatgc 452  Q
    | |||| | ||| | ||||||||| | | |||||| |||||||||    
T  3224387 ttgttatataaatagcttatacattagagcttatatgataaatgc 3224343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 408
Target Start/End: Complemental strand, 4548773 - 4548685
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||||||||||||||  | | | ||||| |||||||||||||||||||||   ||| ||| |||| | |||||||  |||||||||||    
T  4548773 tttttagcttattttctgaagctctccaagatagcttatgaaaacagcttatgacttgtataaaaacagtttgactttattttatcttt 4548685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 10581124 - 10581180
Alignment:
Q  349 aatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatc 405  Q
    ||||||||||||||||| |||| |||||| ||||||| | |||||||  ||||||||    
T  10581124 aatagcttatgaaaacaacttatagcttaaatgaaaaaagtttgactttattttatc 10581180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 428
Target Start/End: Complemental strand, 11211182 - 11211062
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    ||||||||| | |||||| ||||||| ||||   | |||| || |||||||||||| || ||  | |||||||||||| ||||| |||  ||||||||||    
T  11211182 gtccataagttgtttttaacttatttccataaactctccataacagcttatgaaaatagtttttatcttatatgaaaaaaatttaactttattttatctt 11211083  T
Q  408 tagttacagaaacaacttata 428  Q
    | |||  ||||| ||||||||    
T  11211082 ttgttctagaaataacttata 11211062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 11696014 - 11695974
Alignment:
Q  219 ctgtttggattgttttatttgagcttatctattagcataag 259  Q
    ||||||||||||  |||||||||||||| ||||||||||||    
T  11696014 ctgtttggattgacttatttgagcttatttattagcataag 11695974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 448
Target Start/End: Original strand, 16981942 - 16982082
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    ||||||||| | ||||||||||||||  ||| | | ||||  ||||||||||| |||| |||| || || | | |||| ||||  |||  ||||||||||    
T  16981942 gtccataagttgtttttagcttatttatataagctctccatgatagcttatgataacatcttaaagtttttgtaaaaacaattccactttattttatctt 16982041  T
Q  408 tagttacagaaacaacttatacataaaaacttatacgataa 448  Q
    | ||||  |||| || ||||||||||| ||||||| |||||    
T  16982042 ttgttatcgaaataagttatacataaacacttatatgataa 16982082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 385
Target Start/End: Complemental strand, 17420356 - 17420190
Alignment:
Q  217 gcctgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataag 316  Q
    ||||||||  |||| |||||||||| || | ||||||||||| || | || ||||||||  |||||||||||  |||||| | ||| ||| ||||||||     
T  17420356 gcctgtttcaattggtttatttgagttttt-tattagcataaacacttgttagactgttttgaagagcttatgaaaacaa-cttattacatgtccataaa 17420259  T
Q  317 ctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
     | |||| | ||||||| |||  ||| ||  | |||||||| |||||||| ||| ||||||||||||||    
T  17420258 ttgttttcaacttatttccattagttttctgagatagcttacgaaaacagtttatagcttatatgaaaa 17420190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 357 - 433
Target Start/End: Original strand, 29007771 - 29007847
Alignment:
Q  357 atgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataa 433  Q
    ||||||||| |||| |||||||||||||| | |||||||  | ||| ||||| |||| ||||| |||||| ||||||    
T  29007771 atgaaaacaacttatagcttatatgaaaatagtttgactttaatttttcttttgttatagaaataacttagacataa 29007847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 29723634 - 29723602
Alignment:
Q  168 gattgacttatttgagcttatttactagcataa 200  Q
    |||||||| ||||||||||||||||||||||||    
T  29723634 gattgactaatttgagcttatttactagcataa 29723602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 42174916 - 42174848
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    |||||||| |||||| |||||||||||| ||| ||||| ||| ||||| |||||| |||| ||| ||||    
T  42174916 cataagctgtttttaacttattttcataagttctccaatataacttataaaaacaacttatagcatata 42174848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 385
Target Start/End: Complemental strand, 44422746 - 44422686
Alignment:
Q  325 agcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    |||||||||||||| | | ||||  ||||||||| |||| |||||| ||||||||||||||    
T  44422746 agcttattttcataagctctccaggatagcttataaaaatagcttatagcttatatgaaaa 44422686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 5e-17; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 312 - 433
Target Start/End: Complemental strand, 6364209 - 6364088
Alignment:
Q  312 ataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagt 411  Q
    ||||||| |||| ||||||||||| || ||| ||||  ||||||||||||||  ||||| ||||||| |||| ||||||| |||  ||||||||||| ||    
T  6364209 ataagctgttttcagcttattttcgtaagttctccattatagcttatgaaaattgcttatagcttatgtgaacagaatttcactttattttatcttttgt 6364110  T
Q  412 tacagaaacaacttatacataa 433  Q
    || ||||| | |||||||||||    
T  6364109 tatagaaatagcttatacataa 6364088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 320 - 408
Target Start/End: Complemental strand, 42685476 - 42685388
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||| ||||||||||| | ||| |||||||||||||||||||||| |||||||||||||  |||| ||||| |||  |||||||||||    
T  42685476 tttttggcttattttcacacgttctccaaaatagcttatgaaaacaacttagagcttataaaaaaacaatttaacttcattttatcttt 42685388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 308 - 407
Target Start/End: Complemental strand, 2996637 - 2996538
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    ||||||||||| |||| | |||||||||||| | | ||||| |||||||||||||||| |||| | ||||||| |||| |||||||||  ||||||||||    
T  2996637 gtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttataacttatataaaaacaatttgactgtattttatctt 2996538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 221 - 408
Target Start/End: Complemental strand, 23459777 - 23459592
Alignment:
Q  221 gtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagctat 320  Q
    ||||||||||   |||||||||||||||| ||||||||| || |||||||||||| || ||| ||||| |||| || | ||| ||| ||  ||||| |||    
T  23459777 gtttggattggcatatttgagcttatctactagcataagtat-ggtaagactgtttcggagaacttat-gaaaaaagcttatgacatgttaataagttat 23459680  T
Q  321 ttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||| | ||||| |||||| ||| | ||| ||  ||||||||||||||||| |||||||| ||||| || || |||  |||||||||||    
T  23459679 tttcaacttatattcataagtttttcaagatctcttatgaaaacagcttatagcttataagaaaacaacttaacttcattttatcttt 23459592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 418
Target Start/End: Complemental strand, 11802596 - 11802488
Alignment:
Q  310 ccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttta 409  Q
    ||||||||| |||| |||||||| ||||| | | |||| ||||||||||||||||| |||  ||||||| ||| || |||||||||  |||||||||||     
T  11802596 ccataagctgttttcagcttattctcataagctctccataatagcttatgaaaacaacttgtagcttatgtgagaaaaatttgactttattttatctttt 11802497  T
Q  410 gttacagaa 418  Q
    |||| ||||    
T  11802496 gttatagaa 11802488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 17822874 - 17822942
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    |||||||| ||||||||||||||||||| ||| ||||| |||||||||||||||| |||| ||| ||||    
T  17822874 cataagctttttttagcttattttcataagttctccaagatagcttatgaaaacaacttatagcatata 17822942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 429
Target Start/End: Complemental strand, 49219161 - 49219082
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatac 429  Q
    |||| ||||||||||| |||| |||||||||||||| |||||||||  ||||||| ||| |||| ||||| |||||||||    
T  49219161 atagtttatgaaaacaacttatagcttatatgaaaataatttgactttattttatattttgttatagaaataacttatac 49219082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 233 - 366
Target Start/End: Complemental strand, 28615662 - 28615529
Alignment:
Q  233 ttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaa-acaaacatataacacgtccataagctatttttagcttat 331  Q
    ||||||||||||||||| |  |||||||||| ||||||||||| ||||||||||| |||| || ||| ||| ||| |||||| || |||||| | |||||    
T  28615662 ttatttgagcttatctaatgacataagcatttgtaagactgtttcgaagagctta-agaataccaacttatgacatgtccattagatattttcaccttat 28615564  T
Q  332 tttcatatgttatccaaaatagcttatgaaaacag 366  Q
    || |||| | | ||||| ||||| ||| |||||||    
T  28615563 ttccataagctctccaagatagcctataaaaacag 28615529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 442
Target Start/End: Complemental strand, 8130192 - 8130104
Alignment:
Q  354 cttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttata 442  Q
    ||||||||||||| ||| |||||||||||||| |||||||||  || |||||||| |||| ||||| |||| |||| |||  |||||||    
T  8130192 cttatgaaaacagtttatagcttatatgaaaataatttgactttatgttatcttttgttatagaaagaactcatacgtaagcacttata 8130104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 391
Target Start/End: Complemental strand, 20031810 - 20031730
Alignment:
Q  312 ataagctattttt-agcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    ||||||| ||||| |||| ||||||||| ||| || |||||||||||||||||| ||||| |||||| ||||||| |||||    
T  20031810 ataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattt 20031730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 30207620 - 30207731
Alignment:
Q  351 tagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataaat 450  Q
    ||||||||||||||| |||| |||||||||||||| | ||||| |  ||||||| ||| |||| ||||  ||| |||||||||  ||||||| ||||| |    
T  30207620 tagcttatgaaaacaacttatagcttatatgaaaacagtttga-tttattttattttttgttatagaactaacatatacataagcacttatatgataagt 30207718  T
Q  451 gcataattaagtt 463  Q
    || ||||||||||    
T  30207719 gcttaattaagtt 30207731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 408
Target Start/End: Complemental strand, 51630163 - 51630075
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||| ||||||||||||||  || | ||| |||||||||||||| |||||| ||||||||| |||| ||||| |||  |||||||||||    
T  51630163 ttttcagcttattttcataaattcttcaagatagcttatgaaaatagcttatagcttatatcaaaacaatttaactttattttatcttt 51630075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 419
Target Start/End: Complemental strand, 53626813 - 53626729
Alignment:
Q  335 catatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaa 419  Q
    ||||| || |||| ||| |||||||||||||||||| |||||||||||||| | ||||| |  ||||||||||| |||| |||||    
T  53626813 catatattgtccataatcgcttatgaaaacagcttatagcttatatgaaaacattttgaatttattttatcttttgttatagaaa 53626729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 942129 - 942184
Alignment:
Q  323 ttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttat 378  Q
    |||||||||||| ||| ||| |||| |||||||||||||||||||||||| |||||    
T  942129 ttagcttatttttataagttctccataatagcttatgaaaacagcttagaacttat 942184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 296 - 385
Target Start/End: Complemental strand, 9841141 - 9841053
Alignment:
Q  296 aacatataacacgtccataagctattttt-agcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    ||||||| ||| ||||||||||| ||||| |||||||||||| | |||  |||  |||||||||||||||| |||| ||||||||||||||    
T  9841141 aacatatgacatgtccataagctgtttttcagcttattttcacaagtt--ccaggatagcttatgaaaacatcttatagcttatatgaaaa 9841053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 320 - 379
Target Start/End: Original strand, 16199999 - 16200058
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    ||||||||||||||||||| ||  ||||| ||||||||||||||||||||| ||| ||||    
T  16199999 tttttagcttattttcataagtcctccaagatagcttatgaaaacagcttatagcatata 16200058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 346 - 433
Target Start/End: Complemental strand, 24161016 - 24160929
Alignment:
Q  346 caaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataa 433  Q
    |||||||||||||||| ||| |||| ||| || ||||||| ||||| ||| ||||||||| || |||| ||||| | |||||||||||    
T  24161016 caaaatagcttatgaacacaacttatagcctacatgaaaataatttaacttgattttatcctttgttatagaaatagcttatacataa 24160929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 221 - 408
Target Start/End: Complemental strand, 44320099 - 44319913
Alignment:
Q  221 gtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagctat 320  Q
    |||||||||| |||||||||||||| ||||| |||||| || | || ||||||||  | |||||||||  |||||||  ||| |    ||||| ||||||    
T  44320099 gtttggattggtttatttgagcttacctattggcataaacaattgtgagactgtttgggagagcttatgaaaacaaa-ttatgatgtatccattagctat 44320001  T
Q  321 ttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||| | || ||||||||| ||| || |  ||||||||| |||| |||||  |||||||||||||| | || ||||  |||||||||||    
T  44320000 tttcaactaattttcataagttctctaggatagcttatcaaaatagcttgtagcttatatgaaaacagttcgactttattttatcttt 44319913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 199
Target Start/End: Original strand, 44638139 - 44638182
Alignment:
Q  156 agggcatgtttagattgacttatttgagcttatttactagcata 199  Q
    ||||||||||| |||||||||||||||| |||||||||||||||    
T  44638139 agggcatgtttggattgacttatttgagtttatttactagcata 44638182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 452
Target Start/End: Complemental strand, 23819111 - 23819010
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataaa 449  Q
    ||||||||||||||||  ||| | |||||||||||| | |||||||  ||||||| ||| ||||  |||| |||||||||||||| |||| || ||||||    
T  23819111 atagcttatgaaaacatgttataacttatatgaaaacagtttgactacattttatattt-gttatggaaataacttatacataaacacttgtatgataaa 23819013  T
Q  450 tgc 452  Q
    |||    
T  23819012 tgc 23819010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 448
Target Start/End: Complemental strand, 24444068 - 24443962
Alignment:
Q  342 tatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttat 441  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||   ||||| |  ||||||| ||| |||  |||||   ||||||||||| |||||||    
T  24444068 tatccacaatagcttatgaaaacaacttatagcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttat 24443969  T
Q  442 acgataa 448  Q
    | |||||    
T  24443968 atgataa 24443962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 433
Target Start/End: Original strand, 27043835 - 27043961
Alignment:
Q  307 cgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatct 406  Q
    |||||||||  | |||||||||||| |||||| ||| ||||| |||| |||| |||||| |||| |||||||| ||||| ||||| |||  ||||||||     
T  27043835 cgtccataaattgtttttagcttatattcatacgttctccaagatagtttataaaaacatcttatagcttatacgaaaacaatttaactttattttatcc 27043934  T
Q  407 ttagttacagaaacaacttatacataa 433  Q
    || |||| | ||  | |||||||||||    
T  27043935 tttgttatataagtaccttatacataa 27043961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 419
Target Start/End: Complemental strand, 52735173 - 52735075
Alignment:
Q  321 ttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaa 419  Q
    ||||||||||||| |||| | | | ||| |||||||| ||||||| | || | |||||||||||  |||||||||  ||||||||||| ||||||||||    
T  52735173 ttttagcttatttccataagctcttcaagatagcttacgaaaacaacatataacttatatgaaagtaatttgactttattttatcttttgttacagaaa 52735075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 419
Target Start/End: Complemental strand, 4071904 - 4071835
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaa 419  Q
    ||||||||| | |||| |||| |||||||||||||| |||||||||  ||||||||||| |||| |||||    
T  4071904 atagcttatcataacaacttatagcttatatgaaaataatttgactttattttatcttttgttatagaaa 4071835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 433
Target Start/End: Complemental strand, 26884039 - 26883934
Alignment:
Q  328 ttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttat 427  Q
    ||||||||||| ||| ||||| | || ||| ||||||  |||| |||||||||||||| ||||| |||  ||||||||| |  ||| ||||| |||||||    
T  26884039 ttattttcataggttctccaataaagtttacgaaaacgacttatagcttatatgaaaacaatttaacttcattttatctcttcttagagaaataacttat 26883940  T
Q  428 acataa 433  Q
    ||||||    
T  26883939 acataa 26883934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 449
Target Start/End: Complemental strand, 30024700 - 30024623
Alignment:
Q  372 agcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataaa 449  Q
    |||||||||||||| ||||| |||  ||||||||||| |||| ||||| ||||||| |||||  ||||||| ||||||    
T  30024700 agcttatatgaaaacaattttactttattttatcttttgttatagaaataacttatgcataagtacttatatgataaa 30024623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 55302308 - 55302251
Alignment:
Q  313 taagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    |||||| |||| |||||||||||||| ||| ||||| ||||||||||| |||||||||    
T  55302308 taagcttttttcagcttattttcataagttttccaacatagcttatgataacagctta 55302251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 825508 - 825552
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaac 364  Q
    |||| |||||||||||||| ||| |||||||||||||||||||||    
T  825508 ttttcagcttattttcataagttctccaaaatagcttatgaaaac 825552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 434
Target Start/End: Complemental strand, 35958677 - 35958593
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaa 434  Q
    ||||||||||||||||||||  ||||||||| |||  |||||||||  |||||| |||  |||| ||||| | ||||||||||||    
T  35958677 atagcttatgaaaacagcttctagcttatataaaacaaatttgactttattttaacttatgttatagaaatagcttatacataaa 35958593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 408
Target Start/End: Original strand, 437455 - 437538
Alignment:
Q  325 agcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||||||||||||| |   || ||||||||||||||||||| |||| | |||||||||| | ||||| |||  |||||||||||    
T  437455 agcttattttcataaggcctctaaaatagcttatgaaaacaacttaaaacttatatgaacacaatttaactttattttatcttt 437538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 390
Target Start/End: Complemental strand, 1706683 - 1706604
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatt 390  Q
    ||||||||||||  | |||||||||||| | | ||||| |||| |||||||||||||||| ||||| || ||||| ||||    
T  1706683 cataagctatttccaacttattttcataagctgtccaagatagtttatgaaaacagcttatagcttctacgaaaacaatt 1706604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 188
Target Start/End: Original strand, 10205851 - 10205886
Alignment:
Q  153 attagggcatgtttagattgacttatttgagcttat 188  Q
    |||| |||||||||||||||||||||||||||||||    
T  10205851 attatggcatgtttagattgacttatttgagcttat 10205886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 22796806 - 22796763
Alignment:
Q  220 tgtttggattgttttatttgagcttatctattagcataagcatt 263  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||    
T  22796806 tgtttggattgatttatttgagtttatctactagcataagcatt 22796763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 25487489 - 25487544
Alignment:
Q  233 ttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttat 288  Q
    ||||||||| ||||||||||||||||||| | |||||| ||||  |||||||||||    
T  25487489 ttatttgagtttatctattagcataagcacttgtaagattgtttggaagagcttat 25487544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 428
Target Start/End: Complemental strand, 36460605 - 36460530
Alignment:
Q  353 gcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttata 428  Q
    |||||||||||||||||| |||||||||||||| | | || || ||| |||||||| ||||  |||| ||||||||    
T  36460605 gcttatgaaaacagcttatagcttatatgaaaacagtgtggcttgatcttatcttttgttatcgaaataacttata 36460530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 391
Target Start/End: Complemental strand, 40174627 - 40174544
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    |||||||| || |||| | |||||| ||| | ||| |||||  |||||||||||||||||||| ||||| |||||||| |||||    
T  40174627 gtccataaactgttttcaacttattatcacaagttctccaatgtagcttatgaaaacagcttatagcttttatgaaaacaattt 40174544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 391
Target Start/End: Complemental strand, 52754624 - 52754581
Alignment:
Q  348 aaatagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||    
T  52754624 aaatagcttatgaaaacagcttatagcttatgtgaaaaggattt 52754581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 338
Target Start/End: Complemental strand, 53315478 - 53315360
Alignment:
Q  219 ctgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagct 318  Q
    ||||||||||||  ||||||||||||||| | | | |||||||    ||||||| ||    |||||||||  |||||| ||||| ||| |||||||||||    
T  53315478 ctgtttggattgacttatttgagcttatccactggtataagcacatataagactatttgtgagagcttatgaaaacaa-catatcacatgtccataagct 53315380  T
Q  319 atttttagcttattttcata 338  Q
    ||||||| ||||||||||||    
T  53315379 atttttaacttattttcata 53315360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 408
Target Start/End: Complemental strand, 3175973 - 3175915
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||||||||||||||||||| | ||||  |||||| |||||||||  |||||||||||    
T  3175973 atagcttatgaaaacagcttataacttacttgaaaacaatttgactttattttatcttt 3175915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 391
Target Start/End: Complemental strand, 29778842 - 29778776
Alignment:
Q  325 agcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaattt 391  Q
    |||||||||||||| | | | |||  ||||||||||||||| |||| |||||||||||||| |||||    
T  29778842 agcttattttcataagctcttcaaggtagcttatgaaaacaacttacagcttatatgaaaacaattt 29778776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 433
Target Start/End: Original strand, 30338597 - 30338723
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaa-cagcttagagcttatatgaaaagaatttgactcgattttatct 406  Q
    ||||||||||| ||||  |||||||||||||   | ||||| | |||||||||||| ||| ||| |||||||||||||| | ||| |||  ||| |||||    
T  30338597 gtccataagctgttttatgcttattttcataaactctccaagagagcttatgaaaaacagtttatagcttatatgaaaacagtttaactttattctatct 30338696  T
Q  407 ttagttacagaaacaacttatacataa 433  Q
    || |||| ||||| |  ||||||||||    
T  30338697 tttgttatagaaatagtttatacataa 30338723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 35571656 - 35571714
Alignment:
Q  327 cttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    |||||||||| | ||| || || ||||||||||||||||||||| |||||||| |||||    
T  35571656 cttattttcacaagttctctaagatagcttatgaaaacagcttatagcttatacgaaaa 35571714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 433
Target Start/End: Original strand, 45128363 - 45128441
Alignment:
Q  355 ttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataa 433  Q
    |||||||||||  ||| ||||||||||| || ||||||| | |||||||||||| |||| ||||| |  ||||||||||    
T  45128363 ttatgaaaacaatttatagcttatatgagaataatttgatttgattttatcttttgttatagaaatagtttatacataa 45128441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 54325085 - 54325143
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||||| |||||| |||||| |||||||||||||| | |||||||  |||||||||||    
T  54325085 atagcttttgaaaatagcttatagcttatatgaaaacagtttgactttattttatcttt 54325143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 10172213 - 10172172
Alignment:
Q  220 tgtttggattgttttatttgagcttatctattagcataagca 261  Q
    ||||||||||| |||||||||||||||||||  |||||||||    
T  10172213 tgtttggattgatttatttgagcttatctatatgcataagca 10172172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 395
Target Start/End: Complemental strand, 24091481 - 24091440
Alignment:
Q  354 cttatgaaaacagcttagagcttatatgaaaagaatttgact 395  Q
    ||||||||||||| ||| |||||||||||||| |||||||||    
T  24091481 cttatgaaaacagtttatagcttatatgaaaataatttgact 24091440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 469
Target Start/End: Original strand, 24160545 - 24160662
Alignment:
Q  352 agcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataaatg 451  Q
    |||||||||||||| |||| |||||| ||||||| | ||||| |  || |||||||| |||| ||||| | |||||  ||||  ||||||| |||||  |    
T  24160545 agcttatgaaaacaacttatagcttacatgaaaatagtttgaatttatattatcttttgttatagaaaaagcttatttataagcacttatatgataagcg 24160644  T
Q  452 cataattaagttgtttat 469  Q
      ||||||||||||||||    
T  24160645 tttaattaagttgtttat 24160662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 390
Target Start/End: Complemental strand, 32421148 - 32421087
Alignment:
Q  329 tattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatt 390  Q
    |||||||||| ||| | |||||||||||||| |||| ||||| |||||||||| ||| ||||    
T  32421148 tattttcataagttcttcaaaatagcttatggaaactgcttatagcttatatgtaaacaatt 32421087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 200
Target Start/End: Original strand, 34430626 - 34430655
Alignment:
Q  171 tgacttatttgagcttatttactagcataa 200  Q
    ||||||||||||||||||||||||||||||    
T  34430626 tgacttatttgagcttatttactagcataa 34430655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 36048593 - 36048520
Alignment:
Q  312 ataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaa 385  Q
    |||||||||| | ||||||||| |||| | | || || ||||||| |||||| |||||| ||||||||||||||    
T  36048593 ataagctattgtcagcttatttccataagctctctaagatagcttttgaaaatagcttatagcttatatgaaaa 36048520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 370
Target Start/End: Original strand, 52315220 - 52315265
Alignment:
Q  325 agcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    |||||||||||||| ||| |||||||||||||||| ||||| ||||    
T  52315220 agcttattttcataagttttccaaaatagcttatggaaacaactta 52315265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 54327519 - 54327576
Alignment:
Q  372 agcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatac 429  Q
    |||||||||||||| | |||||||   |||||||||| |||| |||||||||||||||    
T  54327519 agcttatatgaaaacagtttgactttgttttatcttttgttatagaaacaacttatac 54327576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 432
Target Start/End: Complemental strand, 3155655 - 3155543
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaa 419  Q
    |||| |||||||||||||  ||| | ||| |||| |||||||||||||||  ||||| ||  |||| ||||| |||  ||||||||||| | || |||||    
T  3155655 ttttcagcttattttcattagttcttcaagatagtttatgaaaacagcttgtagcttgtacaaaaacaatttaactttattttatcttttgctatagaaa 3155556  T
Q  420 caacttatacata 432  Q
     | ||||||||||    
T  3155555 tagcttatacata 3155543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 3637299 - 3637335
Alignment:
Q  222 tttggattgttttatttgagcttatctattagcataa 258  Q
    |||||||||  ||||||||||||||||||||||||||    
T  3637299 tttggattgacttatttgagcttatctattagcataa 3637335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 408
Target Start/End: Complemental strand, 9760484 - 9760404
Alignment:
Q  328 ttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||||||||| ||| ||||| ||||||||| |||||| |||| ||| |||   |||||||||| |||  |||||||||||    
T  9760484 ttattttcataagttctccaatatagcttataaaaacaacttatagcatattaaaaaagaatttaactttattttatcttt 9760404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 407
Target Start/End: Original strand, 13949893 - 13949949
Alignment:
Q  351 tagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    ||||||||  ||||| |||| |||||||||||||| |||||||||  ||||||||||    
T  13949893 tagcttatacaaacaacttatagcttatatgaaaacaatttgactttattttatctt 13949949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 419
Target Start/End: Complemental strand, 17884129 - 17884021
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttag 410  Q
    |||||| | |||| |||| ||||||||| | | ||||| |||||||||||||||| || | | ||||||  |||| ||||| |||  ||||||||||| |    
T  17884129 cataagttgttttcagctaattttcataagctctccaatatagcttatgaaaacaactgataacttatacaaaaacaatttaactttattttatcttttg 17884030  T
Q  411 ttacagaaa 419  Q
    ||| |||||    
T  17884029 ttatagaaa 17884021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 471
Target Start/End: Complemental strand, 19422415 - 19422319
Alignment:
Q  375 ttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataaatgcataattaagttgtttatcc 471  Q
    |||||||||||   |||||||  ||| ||||||| |||| ||||| |||||||||||||  | ||||| |||||  || |||||||| |||||||||    
T  19422415 ttatatgaaaaatgtttgactttattatatcttttgttatagaaataacttatacataagcatttatatgataagcgcttaattaagctgtttatcc 19422319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 30581719 - 30581783
Alignment:
Q  344 tccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||| ||| ||||| ||||||||||| |||||||| ||||| | |||||||  |||||||||||    
T  30581719 tccaagataacttattaaaacagcttatagcttatacgaaaatagtttgacttcattttatcttt 30581783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 35571549 - 35571589
Alignment:
Q  219 ctgtttggattgttttatttgagcttatctattagcataag 259  Q
    ||||||||||||  ||||||||||||||||| |||||||||    
T  35571549 ctgtttggattggcttatttgagcttatctactagcataag 35571589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 408
Target Start/End: Original strand, 47118983 - 47119071
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||| ||||||| |||||| ||| | ||| ||||| |||||| ||| |||| |||||||||||||| ||||| |||   ||||||||||    
T  47118983 ttttcagcttatcttcataagttcttcaagatagcatatgaatacaacttatagcttatatgaaaacaatttaactttgttttatcttt 47119071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 49202690 - 49202638
Alignment:
Q  327 cttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    |||||||||||  ||||||||| |||||||| ||||||| |||| ||||||||    
T  49202690 cttattttcattagttatccaagatagcttacgaaaacaacttatagcttata 49202638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 428
Target Start/End: Complemental strand, 4246474 - 4246354
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    ||||||||||| |||| | |||||||| ||||| | |||| |||||||||||||||||||||| || ||||||||||| |   |||||  | ||||||||    
T  4246474 gtccataagctgttttcaacttatttttatatgctctccataatagcttatgaaaacagcttatagattatatgaaaacatactgacttcaatttatctt 4246375  T
Q  408 tagttacagaaacaacttata 428  Q
    |  ||| ||||||||||||||    
T  4246374 ttattatagaaacaacttata 4246354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 220 - 442
Target Start/End: Complemental strand, 7148817 - 7148597
Alignment:
Q  220 tgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagcta 319  Q
    ||||||| |||  ||||||||||||||||| | ||||||||| | || ||| ||||| | ||||||||  ||||| ||| ||| ||  ||||||||||||    
T  7148817 tgtttggtttgacttatttgagcttatctagtcgcataagcacttgtgagagtgttcagcagagcttacggaaac-aacttatgacttgtccataagcta 7148719  T
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaa 419  Q
    |||| | |||||||||||| | | ||||   |||||||| |||| | |||| |||||||||| ||||| || || |   ||||||||||||||  |||||    
T  7148718 ttttcaacttattttcataagctctccagggtagcttattaaaataccttatagcttatatgtaaagagttgga-ttttttttatctttagttgtagaaa 7148620  T
Q  420 caacttatacataaaaacttata 442  Q
     | |||||||||||  |||||||    
T  7148619 tagcttatacataagcacttata 7148597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 24476663 - 24476541
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttag 410  Q
    ||||||||||||| | |||||||  ||  ||| ||||||||||||||| ||||| |||||  ||||||||||||| ||||| |||  ||||||||||| |    
T  24476663 cataagctattttcaacttatttcaatccgttctccaaaatagcttatcaaaactgcttatcgcttatatgaaaataatttaactacattttatcttttg 24476564  T
Q  411 ttacagaaacaacttatacataa 433  Q
     || ||||| | |||||||||||    
T  24476563 ctatagaaatagcttatacataa 24476541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 471
Target Start/End: Original strand, 281896 - 282021
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaactt----atacataaaaacttatacga 445  Q
    |||||||||||| |||||||| |||||||||||||| || ||||||  ||||||||||| |||| || || | |||    ||||||||| ||||||||||    
T  281896 atagcttatgaacacagcttatagcttatatgaaaacaagttgactttattttatcttttgttataggaatagcttatagatacataaacacttatacga 281995  T
Q  446 taaatgcataattaagttgtttatcc 471  Q
    | | ||| |||||| |||| ||||||    
T  281996 tcattgcttaattatgttgcttatcc 282021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 219 - 470
Target Start/End: Complemental strand, 8010509 - 8010259
Alignment:
Q  219 ctgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagct 318  Q
    ||||||||||||  |||| |||||||||||||| |||||| |||| || |||| || | | ||||||||||||||| |||  || ||| || ||||||||    
T  8010509 ctgtttggattgacttatgtgagcttatctattggcataaacatttgtgagacagtccaggagagcttatagaaac-aactcatgacatgttcataagct 8010411  T
Q  319 atttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagctt-atatgaaaagaatttgactcgattttatctttagttacaga 417  Q
    ||||| || ||||||  ||| ||| ||||  ||| ||||| ||||||||||| | ||| | ||||||  |  ||||||  ||||||| | | |||| |||    
T  8010410 attttcagtttatttctataagttctccaggataacttattaaaacagcttataacttaaaatgaaagtagattgactttattttat-tgttgttataga 8010312  T
Q  418 aacaacttatacataaaaacttatacgataaatgcataattaagttgtttatc 470  Q
    || | ||||||| |||  ||||||| ||||||  | |||||||||||||||||    
T  8010311 aatagcttatacctaagcacttatatgataaacacttaattaagttgtttatc 8010259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 433
Target Start/End: Original strand, 29274276 - 29274360
Alignment:
Q  349 aatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataa 433  Q
    |||| ||||||||||||| ||| |||||||||||||| |||||||||  ||||||||||| | || ||||| | |||||||||||    
T  29274276 aatatcttatgaaaacagtttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataa 29274360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 471
Target Start/End: Complemental strand, 4006778 - 4006615
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    ||||||||| |||||| ||||||||||||||   | ||    |||||||||||||||| |||| ||||||||| |||| |||||||||  |||||||| |    
T  4006778 gtccataagttattttcagcttattttcataacctctcagggatagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatcat 4006679  T
Q  408 tagttacagaaacaacttatacataaaaacttatacgataaatgcataattaagttgtttatcc 471  Q
    | |||| ||||| | ||||| |||||  |||||| | ||||  |  ||||||||||| ||||||    
T  4006678 ttgttatagaaatatcttatgcataagcacttatgctataagggattaattaagttgcttatcc 4006615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 448
Target Start/End: Complemental strand, 22742384 - 22742290
Alignment:
Q  354 cttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataa 448  Q
    ||||| |||| |||||| |||||||||||||| |||||||||  |||||||| || |||| | ||| | |||||| |||| ||||||||||||||    
T  22742384 cttataaaaatagcttatagcttatatgaaaacaatttgactttattttatcctttgttatacaaatagcttatagataagaacttatacgataa 22742290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 320 - 433
Target Start/End: Original strand, 9093574 - 9093687
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaa 419  Q
    |||| ||||||||||| || ||| || || | ||||||||||||||||||| |||||||| ||||| ||||| |||  ||||||||||| | || |||||    
T  9093574 ttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttgatatagaaa 9093673  T
Q  420 caacttatacataa 433  Q
     | ||||| |||||    
T  9093674 tagcttatccataa 9093687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 419
Target Start/End: Complemental strand, 24782129 - 24782012
Alignment:
Q  302 taacacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattt 401  Q
    |||| ||| |||||||||||||||| ||||||||||| | | || |  |||| |||| |||  |||||| | |||||||||||| ||||||| | |||||    
T  24782129 taactcgttcataagctatttttagtttattttcataagctctcaaggatagtttattaaagtagcttataacttatatgaaaacaatttgatttgattt 24782030  T
Q  402 tatctttagttacagaaa 419  Q
    ||||||| |||| |||||    
T  24782029 tatcttttgttatagaaa 24782012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 32976000 - 32975908
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttata 442  Q
    |||||||||||||||| ||||  |||| |||  ||| | |||||||  ||||||| ||| |||||||||| |||||||||||||| |||||||    
T  32976000 atagcttatgaaaacaacttattgcttctattgaaacagtttgactttattttatattttgttacagaaataacttatacataaacacttata 32975908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 375 - 442
Target Start/End: Original strand, 24836272 - 24836339
Alignment:
Q  375 ttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttata 442  Q
    ||||| ||||| |||||||||  ||||||||||| |||| ||||| |||||||||||||| |||||||    
T  24836272 ttatacgaaaacaatttgactttattttatcttttgttatagaaataacttatacataaatacttata 24836339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 469
Target Start/End: Original strand, 27889892 - 27890010
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataaa 449  Q
    ||||||||||||||| | |||   |||||||||||| | ||||| |  ||||||||| | |||| ||||| ||||| |||||||  ||| ||| ||||||    
T  27889892 atagcttatgaaaactgtttatgtcttatatgaaaatagtttgaatt-attttatctgttgttatagaaataacttgtacataagcactcatatgataaa 27889990  T
Q  450 tgcataattaagttgtttat 469  Q
    ||| ||||||||||||||||    
T  27889991 tgcttaattaagttgtttat 27890010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 413
Target Start/End: Complemental strand, 2735130 - 2735028
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttag 410  Q
    |||||||| ||||  ||||||||||||| ||| | ||| || |||||||||||||||||| || |||||  |||| ||||| |||  ||||||||||| |    
T  2735130 cataagctgttttcggcttattttcataagttgttcaagattgcttatgaaaacagcttatagattatacaaaaataatttaactttattttatcttttg 2735031  T
Q  411 tta 413  Q
    |||    
T  2735030 tta 2735028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 448
Target Start/End: Original strand, 8420115 - 8420343
Alignment:
Q  220 tgtttggattgt-tttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagct 318  Q
    |||||||||||  ||||||||||||||||||||  ||||| || | || ||||||||    ||||||||||||||  | | ||| ||| ||||| |||||    
T  8420115 tgtttggattgactttatttgagcttatctattgacataaacacttgtgagactgttagtgagagcttatagaaa-tagcttatgacatgtccacaagct 8420213  T
Q  319 atttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaa 418  Q
    ||||| | ||||||| |||| | | ||||  |||||||| || ||||||||| |  |||||| || | | |||||||  |||||||| ||  ||| ||||    
T  8420214 attttcaacttatttccataagctctccattatagcttacgagaacagcttatattttatataaacacagtttgactttattttatcatttattaaagaa 8420313  T
Q  419 acaacttatacataaaaacttatacgataa 448  Q
    | ||||| |||||||  ||||||| |||||    
T  8420314 ataacttgtacataagcacttatatgataa 8420343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 29249550 - 29249513
Alignment:
Q  156 agggcatgtttagattgacttatttgagcttatttact 193  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  29249550 agggcatgtttggattgacttatttgagcttatttact 29249513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 31461829 - 31461756
Alignment:
Q  214 taagcctgtttggattgttttatttgagcttatctattagcataagcattggtaagactgttccgaagagctta 287  Q
    |||||||||||| || | |||||||||||||||||||| ||||||| | | || |||||||||  |||||||||    
T  31461829 taagcctgtttgcatcggtttatttgagcttatctatttgcataagtacttgtgagactgttcgcaagagctta 31461756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 448
Target Start/End: Complemental strand, 2206618 - 2206514
Alignment:
Q  344 tccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatac 443  Q
    ||||| |||||||||| |||||| | | ||||||||| |||| ||||  |||  ||||||||||| |||| | ||| |||||||||| |||  |||||||    
T  2206618 tccaagatagcttatgtaaacagttcatagcttatataaaaacaattatactttattttatcttttgttataaaaataacttatacagaaatgcttatac 2206519  T
Q  444 gataa 448  Q
    |||||    
T  2206518 gataa 2206514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 408
Target Start/End: Original strand, 31671092 - 31671180
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||| |||||||||||||| | |||| |  |||| ||| |||||||||||| |||||||||||||| ||||| |||   ||||||||||    
T  31671092 ttttcagcttattttcataagctatctaggatagtttacgaaaacagcttatagcttatatgaaaacaatttaactttgttttatcttt 31671180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 103585 - 103542
Alignment:
Q  216 agcctgtttggattgttttatttgagcttatctattagcataag 259  Q
    |||||||||||||||  |||||||||||||| ||||||||||||    
T  103585 agcctgtttggattgacttatttgagcttatatattagcataag 103542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 395
Target Start/End: Complemental strand, 5550148 - 5550109
Alignment:
Q  356 tatgaaaacagcttagagcttatatgaaaagaatttgact 395  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  5550148 tatgaaaacagcttatagcttatatgaaaacaatttgact 5550109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 435
Target Start/End: Original strand, 33787787 - 33787878
Alignment:
Q  344 tccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaa 435  Q
    ||||| ||| ||||||||||||||||| | |||||||||||  |||||||||   |||||| ||| |||| ||||| |  ||||||||||||    
T  33787787 tccaagataacttatgaaaacagcttataacttatatgaaatcaatttgactttgttttatattttgttatagaaatagtttatacataaaa 33787878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 34430470 - 34430529
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    |||||||| |||| ||||||||||||||  || ||||| |||||||||||||||| ||||    
T  34430470 cataagcttttttcagcttattttcataacttctccaagatagcttatgaaaacacctta 34430529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 370
Target Start/End: Original strand, 835267 - 835317
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    |||| |||||||||||||| ||| ||||| ||||||||||||||| |||||    
T  835267 ttttcagcttattttcataagttctccaagatagcttatgaaaactgctta 835317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 413
Target Start/End: Original strand, 2027455 - 2027517
Alignment:
Q  351 tagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagtta 413  Q
    |||||||||| ||||||||| || ||||||||||| | |||||||  ||||||||||| ||||    
T  2027455 tagcttatgagaacagcttataggttatatgaaaatagtttgactttattttatcttttgtta 2027517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 363
Target Start/End: Complemental strand, 2455948 - 2455819
Alignment:
Q  233 ttatttgagcttatctattagcataagcattggtaagactgttccgaagagcttatagaaacaaacatataacacgtccataagctatttttagcttatt 332  Q
    |||||||||||||||||   ||||||||| | |  ||| ||||  ||||||||||| ||||||| | ||| ||| | |||||| ||||||| | ||||||    
T  2455948 ttatttgagcttatctaccggcataagcacttgcgagattgtttagaagagcttatggaaacaa-cttatgacatgcccataaactattttcaacttatt 2455850  T
Q  333 ttcatatgttatccaaaatagcttatgaaaa 363  Q
    | |||| | | ||||| ||||||||||||||    
T  2455849 tccataagctctccaagatagcttatgaaaa 2455819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 448
Target Start/End: Original strand, 2727904 - 2728002
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataa 448  Q
    |||||||||||||||| |||| ||||||||| || | ||||||| |    ||||||||| |||| |||| || |||||||||||  ||||||| |||||    
T  2727904 atagcttatgaaaacaacttatagcttatatcaatacaatttgatttttgtttatcttttgttatagaagcagcttatacataagcacttatatgataa 2728002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 408
Target Start/End: Complemental strand, 4420735 - 4420609
Alignment:
Q  279 aagagcttatagaaacaaacatataacacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttat 378  Q
    |||||||||||||||||||  ||| ||| || |||||||| |||| ||||||||| |||| | | ||||| |||||||| ||||| | |||  |||||||    
T  4420735 aagagcttatagaaacaaa-ttatgacatgttcataagctgttttcagcttatttccataagctctccaagatagcttaggaaaataactt--agcttat 4420639  T
Q  379 atgaaaagaatttgactcgattttatcttt 408  Q
    |  |||| | |||||||  |||||||||||    
T  4420638 acaaaaatagtttgactttattttatcttt 4420609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 409
Target Start/End: Complemental strand, 9604878 - 9604812
Alignment:
Q  343 atccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttta 409  Q
    |||||||||| ||||||||||||||||| ||||||||  |||| ||||| |||  ||| ||||||||    
T  9604878 atccaaaataacttatgaaaacagcttatagcttatacaaaaataattttactttattatatcttta 9604812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 14492320 - 14492266
Alignment:
Q  354 cttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||||||||||||||| ||||| ||| |||| |||||||||  |||||||||||    
T  14492320 cttatgaaaacagcttatagcttgtatcaaaacaatttgacttcattttatcttt 14492266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 406
Target Start/End: Original strand, 27615335 - 27615377
Alignment:
Q  364 cagcttagagcttatatgaaaagaatttgactcgattttatct 406  Q
    ||||||| ||||||||||||||||||||||||  |||||||||    
T  27615335 cagcttacagcttatatgaaaagaatttgactttattttatct 27615377  T

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Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 407
Target Start/End: Original strand, 27693494 - 27693544
Alignment:
Q  357 atgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    |||||| ||||||| |||||||||||||| |||||||||  ||||||||||    
T  27693494 atgaaatcagcttacagcttatatgaaaataatttgactttattttatctt 27693544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 31624151 - 31624085
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagctta 377  Q
    |||||||| |||| | ||||||||||||  || ||||| ||||| ||||||||||||||| ||||||    
T  31624151 cataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatagctta 31624085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 408
Target Start/End: Original strand, 837233 - 837322
Alignment:
Q  319 atttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||| |||||||||||||| ||| ||||| |||||| ||||||||  |||| |||||| |  |||| ||||| ||||  ||||||||||    
T  837233 attttcagcttattttcataagttctccaagatagctaatgaaaactacttatagcttacaccaaaacaatttaactctgttttatcttt 837322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 419
Target Start/End: Complemental strand, 1403018 - 1402949
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaa 419  Q
    ||||||||||||||||  ||| |||||||||||||| | ||| |||  ||||||||||| |||| |||||    
T  1403018 atagcttatgaaaacaatttatagcttatatgaaaatagtttaactttattttatcttttgttatagaaa 1402949  T

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Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 408
Target Start/End: Original strand, 7785762 - 7785848
Alignment:
Q  320 tttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatcttt 408  Q
    |||| ||||||||| |||| | | |||||||||||  ||||| |||  ||| |||||||||||||||| |||||||  |||||||||||    
T  7785762 ttttcagcttatttccataagctctccaaaatagc--atgaagacaatttatagcttatatgaaaagagtttgactttattttatcttt 7785848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 413
Target Start/End: Original strand, 9667991 - 9668096
Alignment:
Q  308 gtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctt 407  Q
    ||||||||||| |||| | ||||||| |||| | | ||| ||| || |||||||||||  ||  |||||||||||||| |||| ||||| || |||||||    
T  9667991 gtccataagctgttttcaacttatttccataagctctccgaaacagtttatgaaaacaaattgtagcttatatgaaaacaattcgactctatgttatctt 9668090  T
Q  408 tagtta 413  Q
    | ||||    
T  9668091 ttgtta 9668096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 443
Target Start/End: Original strand, 20671913 - 20672006
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatac 443  Q
    |||| |||||||||||  ||| |||||||| ||||| |||||||||  ||||||||||| | |  ||||| | |||||||||||  ||||||||    
T  20671913 atagtttatgaaaacaatttaaagcttatacgaaaacaatttgactttattttatcttttgatctagaaatagcttatacataatcacttatac 20672006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Original strand, 27924601 - 27924634
Alignment:
Q  300 tataacacgtccataagctatttttagcttattt 333  Q
    ||||||||||||||||| ||||||||||||||||    
T  27924601 tataacacgtccataagttatttttagcttattt 27924634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 377
Target Start/End: Original strand, 28641747 - 28641824
Alignment:
Q  300 tataacacgtccataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagctta 377  Q
    ||||||| || |||||||| ||||||||||||||||||| | | | || |||||||  ||||||||| ||| ||||||    
T  28641747 tataacatgttcataagctgtttttagcttattttcataagctctgcagaatagctattgaaaacagtttatagctta 28641824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 835179 - 835219
Alignment:
Q  219 ctgtttggattgttttatttgagcttatctattagcataag 259  Q
    ||||||||||||  ||||||||||||||||| |||||||||    
T  835179 ctgtttggattgccttatttgagcttatctactagcataag 835219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 3201956 - 3202024
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    |||||| | |||| ||||||||  |||||||||||||| |||||||||||| | |||||| || |||||    
T  3201956 cataagttgttttcagcttattcccatatgttatccaagatagcttatgaacatagcttatagtttata 3202024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 5977078 - 5977042
Alignment:
Q  164 tttagattgacttatttgagcttatttactagcataa 200  Q
    |||||||||||||||| |||||||| |||||||||||    
T  5977078 tttagattgacttattcgagcttatctactagcataa 5977042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 9109276 - 9109328
Alignment:
Q  327 cttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    |||||||||||| ||| |||||| ||| | |||||||||||||| ||||||||    
T  9109276 cttattttcataggttctccaaattagttaatgaaaacagcttatagcttata 9109328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 433
Target Start/End: Original strand, 9559553 - 9559672
Alignment:
Q  313 taagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagtt 412  Q
    |||||| |||| | |||||||||||| ||||| ||| ||||||| ||||||||| ||  || || || ||||| ||||| | |  ||||||||||| | |    
T  9559553 taagctgttttcaacttattttcataagttattcaagatagctt-tgaaaacagtttgtagtttctacgaaaacaatttaaatttattttatcttttgct 9559651  T
Q  413 acagaaacaacttatacataa 433  Q
    | ||||| |||||||||||||    
T  9559652 atagaaataacttatacataa 9559672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 12111121 - 12111077
Alignment:
Q  217 gcctgtttggattgttttatttgagcttatctattagcataagca 261  Q
    |||| |||||||||  ||||||||||||||||| |||||||||||    
T  12111121 gcctatttggattgacttatttgagcttatctactagcataagca 12111077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 12111112 - 12111080
Alignment:
Q  168 gattgacttatttgagcttatttactagcataa 200  Q
    ||||||||||||||||||||| |||||||||||    
T  12111112 gattgacttatttgagcttatctactagcataa 12111080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 390
Target Start/End: Original strand, 24838791 - 24838831
Alignment:
Q  350 atagcttatgaaaacagcttagagcttatatgaaaagaatt 390  Q
    ||||||||||||| ||||||| |||||||||||||| ||||    
T  24838791 atagcttatgaaatcagcttatagcttatatgaaaataatt 24838831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 315 - 379
Target Start/End: Complemental strand, 24982762 - 24982698
Alignment:
Q  315 agctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagcttagagcttata 379  Q
    |||| |||||||||||   ||||| ||| ||||||||| ||||||||||||||||| ||| ||||    
T  24982762 agctttttttagcttaccctcataagttctccaaaataacttatgaaaacagcttatagcatata 24982698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 372 - 408
Target Start/End: Complemental strand, 27713507 - 27713471
Alignment:
Q  372 agcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||||||||||||||||||||||  |||||||||||    
T  27713507 agcttatatgaaaagaatttgactttattttatcttt 27713471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 31338122 - 31338090
Alignment:
Q  168 gattgacttatttgagcttatttactagcataa 200  Q
    ||||||||||||||||||||| |||||||||||    
T  31338122 gattgacttatttgagcttatctactagcataa 31338090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 31813222 - 31813174
Alignment:
Q  311 cataagctatttttagcttattttcatatgttatccaaaatagcttatg 359  Q
    |||||||  |||| |||||||||||||||||| ||||| ||||||||||    
T  31813222 cataagccgttttcagcttattttcatatgttctccaagatagcttatg 31813174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 345 - 433
Target Start/End: Complemental strand, 27603 - 27515
Alignment:
Q  345 ccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataa 433  Q
    |||| |||| ||||||||||| |||| || ||||||||||| |||||||||  ||||||||||  |||| ||||| |||||||||||||    
T  27603 ccaagatagtttatgaaaacaacttatagtttatatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataa 27515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 21304 - 21353
Alignment:
Q  321 ttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    |||||| |||||||||||  || ||||| |||||||||||||||||||||    
T  21304 ttttagtttattttcataatttctccaatatagcttatgaaaacagctta 21353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 451
Target Start/End: Complemental strand, 42639 - 42538
Alignment:
Q  349 aatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaaaacttatacgataa 448  Q
    ||||||||||||||||| || | |||||||||||||    ||| |||| ||||||||||| |||| |||||  ||||||||||||  ||||||| |||||    
T  42639 aatagcttatgaaaacaactaatagcttatatgaaacaggttt-actctattttatcttttgttatagaaatgacttatacataagcacttatatgataa 42541  T
Q  449 atg 451  Q
    |||    
T  42540 atg 42538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 22290 - 22233
Alignment:
Q  313 taagctatttttagcttattttcatatgttatccaaaatagcttatgaaaacagctta 370  Q
    |||||| |||| |||||||||||||| ||| ||||| ||||||||||| |||||||||    
T  22290 taagcttttttcagcttattttcataagttttccaacatagcttatgataacagctta 22233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 372 - 408
Target Start/End: Original strand, 18437 - 18473
Alignment:
Q  372 agcttatatgaaaagaatttgactcgattttatcttt 408  Q
    ||||||||||||||||||||||||  |||||||||||    
T  18437 agcttatatgaaaagaatttgactttattttatcttt 18473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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