View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16781_high_2 (Length: 410)
Name: NF16781_high_2
Description: NF16781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16781_high_2 |
 | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold0277 (2 HSPs) |
| | |
|
| [»] scaffold0349 (2 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 362; Significance: 0; HSPs: 47)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 1 - 395
Target Start/End: Original strand, 26142988 - 26143384
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
26142988 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcagagtgggatttatggtgagc |
26143087 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26143088 |
atcttactaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgattgcgtcaatggaagatagctcttatccaagctgctaacttgtccgg |
26143187 |
T |
|
| Q |
201 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttcattaatttttatgcctaaataatttactctc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
26143188 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttcattaatttttatgcctaaataatctactctc |
26143287 |
T |
|
| Q |
301 |
aaagcttaaataggaacacattttctattaatgtttttaaaacaagtgtaagttatt--tatgtcaaaaaagttagaattgcataatatattctcaa |
395 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26143288 |
aaagcttaaataggaacacattttctattaatgtttttaaaacaagtgtaagttatttatatgtcaaaaaagttagaattgcataatatattctcaa |
26143384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 1 - 395
Target Start/End: Original strand, 25538663 - 25539059
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
25538663 |
atcattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcagttacgacatcagagtgggagttatggtgagc |
25538762 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|| ||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
25538763 |
attttactaagcatgaagagaggtttcaaaataatgagaaaaacatggagcgattgcgtcaatggaagatagctcttatccaagctgctaacttgtccgg |
25538862 |
T |
|
| Q |
201 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttcattaatttttatgcctaaataatttactctc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
25538863 |
ctatcattatagtcctcatgggtaccccactttacttaaatcttgtttttcctttctatattttatttcattaatttttatgcctaaataatctactctt |
25538962 |
T |
|
| Q |
301 |
aaagcttaaataggaacacattttctattaatgtttttaaaacaagtgtaagttatt--tatgtcaaaaaagttagaattgcataatatattctcaa |
395 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
25538963 |
aaaacttaaataggaacacattttctattaatgtttttaaaacaagtgtaagttatttatatgtcaaaaaaattagaattgcataatatattctcaa |
25539059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 395
Target Start/End: Original strand, 25579842 - 25580238
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25579842 |
atcattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagt |
25579941 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25579942 |
atcttactaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgattgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
25580041 |
T |
|
| Q |
201 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttcattaatttttatgcctaaataatttactctc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||| |||||| || ||| |
|
|
| T |
25580042 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttctttttcctttctatattttatttctttaattgttatgcctcaataatctaatctt |
25580141 |
T |
|
| Q |
301 |
aaagcttaaataggaacacattttctattaatgtttttaaaacaagtgtaagtta--tttatgtcaaaaaagttagaattgcataatatattctcaa |
395 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||| ||||||| ||||||| |
|
|
| T |
25580142 |
caagcttaaataggaacagattttctattaatgtttttaaaacaagtgtaagttaattatatttcaaaaaaggtagaattgaataatattttctcaa |
25580238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 395
Target Start/End: Original strand, 26056049 - 26056438
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26056049 |
atcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
26056148 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||||| ||||||| ||||| |||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
26056149 |
atcttactaagcataaagaggggttccaaaataacgagaaaaacatggagcgattgcgtcaatggaagatggctcttactcaagctgctaacttgtccgg |
26056248 |
T |
|
| Q |
201 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttcattaatttttatgcctaaataatttactctc |
300 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
26056249 |
ctatcattatagtcctcatgagtaccctactttacttaaatcttgttttt------tatattttatttctttaatttttatgcctaaataatctactctt |
26056342 |
T |
|
| Q |
301 |
aaagcttaaataggaacacattttctattaatgtttttaaaacaagtgtaagttatt--tatgtcaaaaaagttagaattgcataatatattctcaa |
395 |
Q |
| |
|
|||||||||| | | | | ||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
26056343 |
aaagcttaaacatggaggga-tttctatcaatggttttaaaactagtgtaagttatttatatgtcaaaaaagttagaattgcataatatattatcaa |
26056438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 395
Target Start/End: Original strand, 26076019 - 26076408
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26076019 |
atcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
26076118 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||||| ||||||| ||||| |||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
26076119 |
atcttactaagcataaagaggggttccaaaataacgagaaaaacatggagcgattgcgtcaatggaagatggctcttactcaagctgctaacttgtccgg |
26076218 |
T |
|
| Q |
201 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttcattaatttttatgcctaaataatttactctc |
300 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
26076219 |
ctatcattatagtcctcatgagtaccctactttacttaaatcttgttttt------tatattttatttctttaatttttatgcctaaataatctactctt |
26076312 |
T |
|
| Q |
301 |
aaagcttaaataggaacacattttctattaatgtttttaaaacaagtgtaagttatt--tatgtcaaaaaagttagaattgcataatatattctcaa |
395 |
Q |
| |
|
|||||||||| | | | | ||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
26076313 |
aaagcttaaacatggaggga-tttctatcaatggttttaaaactagtgtaagttatttatatgtcaaaaaagttagaattgcataatatattatcaa |
26076408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 25481865 - 25482147
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| | | |||| ||| | | ||||||||||| |
|
|
| T |
25481865 |
atcattcactgctacaagacaaagagttgcttagtattacccgttttctatggtgtggatcctactgatgttcgacgtcatacatgtagttatggtgaat |
25481964 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||| | ||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||| |||||||| |
|
|
| T |
25481965 |
atctgactaagcatgaagaggggttccaaaataacgagaaaaacatggagcgattgcgtcaatggaagatggctcttactcaagctgctaatttgtccgg |
25482064 |
T |
|
| Q |
201 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttcattaatttttatgc |
283 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25482065 |
ctatcattatagtcctcatgagtaccccactttacttaaaacttgtttttcctttctatattttatttcattaatttttatgc |
25482147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 393
Target Start/End: Original strand, 26646602 - 26646993
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
|||||||| ||||||||||||||| || | | || || ||||||||||||| ||||| |||||||| ||||| ||||| ||||||||||||||||| | |
|
|
| T |
26646602 |
atcattcattgctacaagacaaagggtcgtctcgttttgcccgttttctatggcgtggatcctactcagatacggcatcaaagtgggagttatggtgaac |
26646701 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||| | |||||| |||||||| || ||||||||| ||||||||| ||| ||| ||| |||||||||| | ||||| ||||||||||||||||||||||| |
|
|
| T |
26646702 |
atctcactaagcacgaagagagtttccaaaataacaagaaaaacaaggaacgattgcatcaatggaagttggctctgacccaagctgctaacttgtccgg |
26646801 |
T |
|
| Q |
201 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttcattaatttttatgcctaaataatttactctc |
300 |
Q |
| |
|
|| ||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||| | || | | ||| | ||| |
|
|
| T |
26646802 |
ataccattatagtcc---tgggtaccccactttacttaaaccttgtttttcctttttatattttctttatttaattttttttcc-acaaaatctcatctt |
26646897 |
T |
|
| Q |
301 |
aaagcttaaatagg-aacacat-tttctattaatgtttttaaaacaagtgtaagttatt--tatgtcaaaaaagttagaattgcataatatattctc |
393 |
Q |
| |
|
|||||||||||||| ||||||| ||| ||||||||||||| |||||||| ||| ||||| |||||||||| |||||||| || ||||||||||||| |
|
|
| T |
26646898 |
aaagcttaaataggaaacacatatttttattaatgttttt-aaacaagtataaattatttatatgtcaaaagagttagaactgtataatatattctc |
26646993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 393
Target Start/End: Original strand, 26752570 - 26752961
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
|||||||| ||||||||||||||| || | | || || ||||||||||||| ||||| |||||||| ||||| ||||| ||||||||||||||||| | |
|
|
| T |
26752570 |
atcattcattgctacaagacaaagggtcgtctcgttttgcccgttttctatggcgtggatcctactcagatacggcatcaaagtgggagttatggtgaac |
26752669 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||| | |||||| |||||||| || ||||||||| ||||||||| ||| ||| ||| |||||||||| | ||||| ||||||||||||||||||||||| |
|
|
| T |
26752670 |
atctcactaagcacgaagagagtttccaaaataacaagaaaaacaaggaacgattgcatcaatggaagttggctctgacccaagctgctaacttgtccgg |
26752769 |
T |
|
| Q |
201 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttcattaatttttatgcctaaataatttactctc |
300 |
Q |
| |
|
|| ||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||| | || | | ||| | ||| |
|
|
| T |
26752770 |
ataccattatagtcc---tgggtaccccactttacttaaaccttgtttttcctttttatattttctttatttaattttttttcc-acaaaatctcatctt |
26752865 |
T |
|
| Q |
301 |
aaagcttaaatagg-aacacat-tttctattaatgtttttaaaacaagtgtaagttatt--tatgtcaaaaaagttagaattgcataatatattctc |
393 |
Q |
| |
|
|||||||||||||| ||||||| ||| ||||||||||||| |||||||| ||| ||||| |||||||||| |||||||| || ||||||||||||| |
|
|
| T |
26752866 |
aaagcttaaataggaaacacatatttttattaatgttttt-aaacaagtataaattatttatatgtcaaaagagttagaactgtataatatattctc |
26752961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 27338129 - 27337870
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
|||||||||||||||||||||| | |||| | || || || |||||||||| || ||| ||||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
27338129 |
atcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacgacatcagactgggagttatggtgagc |
27338030 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||||| |||||||||||| | ||| ||||||||| || ||||||||||| | || |||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
27338029 |
atcttactaagcatgaagataagttccaaaataacaaggaaaacatggagaggttgaagaaatggaagatggctcttacccaagctgctaacttctccgg |
27337930 |
T |
|
| Q |
201 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatatttt |
264 |
Q |
| |
|
| | |||| ||| ||| |||||||||||||||||||| | || |||||||||| |||||||| |
|
|
| T |
27337929 |
ccaccattttag---tcaagggtaccccactttacttaata-ttatttttcctttttatatttt |
27337870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 27398869 - 27398610
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
|||||||||||||||||||||| | |||| | || || || |||||||||| || ||| ||||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
27398869 |
atcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacgacatcagactgggagttatggtgagc |
27398770 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||||| |||||||||||| | ||| ||||||||| || ||||||||||| | || |||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
27398769 |
atcttactaagcatgaagataagttccaaaataacaaggaaaacatggagaggttgaagaaatggaagatggctcttacccaagctgctaacttctccgg |
27398670 |
T |
|
| Q |
201 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatatttt |
264 |
Q |
| |
|
| | |||| ||| ||| |||||||||||||||||||| | || |||||||||| |||||||| |
|
|
| T |
27398669 |
ccaccattttag---tcaagggtaccccactttacttaata-ttatttttcctttttatatttt |
27398610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 206 - 395
Target Start/End: Original strand, 25511268 - 25511454
Alignment:
| Q |
206 |
attatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttcattaatttttatgcctaaataatttactctcaaagc |
305 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| |||||||||| ||| ||||||||||||| ||||||||| |||||||||||| |||||| ||||| |
|
|
| T |
25511268 |
attatagtcctcatgggtaccctactttacttaaatcttgtttttcttttttatattttatttctttaatttttttgcctaaataatctactcttaaagc |
25511367 |
T |
|
| Q |
306 |
ttaaataggaacacattttctattaatgtttttaaaacaagtgtaagttatttatgtcaaaaaagttagaattgcataatatattctcaa |
395 |
Q |
| |
|
||||| | | | | |||||||||||| ||||||||||||||||||||| ||||| |||||| |||||||||||||||||||| |||| |
|
|
| T |
25511368 |
ttaaacatgga-gcgatttctattaatggttttaaaacaagtgtaagtta--tatgtaaaaaaatttagaattgcataatatattatcaa |
25511454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 26048968 - 26049085
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
26048968 |
atcattcactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacatacgacatcatagtggaagttatggtgagc |
26049067 |
T |
|
| Q |
101 |
atcttagtaagcatgaag |
118 |
Q |
| |
|
|||||| ||||||||||| |
|
|
| T |
26049068 |
atcttactaagcatgaag |
26049085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 26070137 - 26070254
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
26070137 |
atcattcactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacatacgacatcatagtggaagttatggtgagc |
26070236 |
T |
|
| Q |
101 |
atcttagtaagcatgaag |
118 |
Q |
| |
|
|||||| ||||||||||| |
|
|
| T |
26070237 |
atcttactaagcatgaag |
26070254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 26656112 - 26656361
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
|||||||| ||||| ||||||||| |||| | || || || |||||||||| |||||| |||||||||||||||||||||| ||| ||||| ||||||| |
|
|
| T |
26656112 |
atcattcattgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacgacatcagactggaagttacggtgagc |
26656211 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||||| |||||||||| ||| ||| ||||||||| || |||||||| || | || ||||||||||| ||||| ||| ||||||| |||||||| || |
|
|
| T |
26656212 |
atcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctctgaccaaagctgccaacttgtctgg |
26656311 |
T |
|
| Q |
201 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcct |
253 |
Q |
| |
|
||| |||| ||| ||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
26656312 |
ctaccattgtag---tcaagggtaccccactttacttaaatcttgtttttcct |
26656361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 26762083 - 26762332
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
|||||||| ||||| ||||||||| |||| | || || || |||||||||| |||||| |||||||||||||||||||||| ||| ||||| ||||||| |
|
|
| T |
26762083 |
atcattcattgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacgacatcagactggaagttacggtgagc |
26762182 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||||| |||||||||| ||| ||| ||||||||| || |||||||| || | || ||||||||||| ||||| ||| ||||||| |||||||| || |
|
|
| T |
26762183 |
atcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctctgaccaaagctgccaacttgtctgg |
26762282 |
T |
|
| Q |
201 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcct |
253 |
Q |
| |
|
||| |||| ||| ||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
26762283 |
ctaccattgtag---tcaagggtaccccactttacttaaatcttgtttttcct |
26762332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 108 - 216
Target Start/End: Original strand, 27214650 - 27214758
Alignment:
| Q |
108 |
taagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccggctatcat |
207 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||||||||| ||| |||||||||||||||||| ||||||||||||||| || ||||||||| |
|
|
| T |
27214650 |
taagcatgaagagaggtttcaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagctgctaacttatctggctatcat |
27214749 |
T |
|
| Q |
208 |
tatagtcct |
216 |
Q |
| |
|
||||||||| |
|
|
| T |
27214750 |
tatagtcct |
27214758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 108 - 216
Target Start/End: Complemental strand, 27234578 - 27234470
Alignment:
| Q |
108 |
taagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccggctatcat |
207 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||||||||| ||| |||||||||||||||||| ||||||||||||||| || ||||||||| |
|
|
| T |
27234578 |
taagcatgaagagaggtttcaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagctgctaacttatctggctatcat |
27234479 |
T |
|
| Q |
208 |
tatagtcct |
216 |
Q |
| |
|
||||||||| |
|
|
| T |
27234478 |
tatagtcct |
27234470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 395
Target Start/End: Original strand, 25483454 - 25483575
Alignment:
| Q |
275 |
tttttatgcctaaataatttactctcaaagcttaaataggaacacattttctattaatgtttttaaaacaagtgtaagttatt--tatgtcaaaaaagtt |
372 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||| | | | |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
25483454 |
tttttatgcctaaataatctactcttaaagcttaaacatggagcgattt-ctattaatggttttaaaacaagtgtaagttatttatatgtcaaaaaagtt |
25483552 |
T |
|
| Q |
373 |
agaattgcataatatattctcaa |
395 |
Q |
| |
|
|||||||||| |||||||||||| |
|
|
| T |
25483553 |
agaattgcatgatatattctcaa |
25483575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 214
Target Start/End: Original strand, 26824005 - 26824176
Alignment:
| Q |
43 |
gttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcatcttagtaagcatgaagagaggtttcaaaataacgagaaaa |
142 |
Q |
| |
|
|||||||||| |||||| ||| | |||||||||||||| |||||||||||| | ||||| | |||||||||| ||||||| ||||||| || ||| |
|
|
| T |
26824005 |
gttttctatggtgtggatcctggtgacatacgacatcagcgtgggagttatgctatacatctcactaagcatgaaaagaggttcggaaataacaaggaaa |
26824104 |
T |
|
| Q |
143 |
acatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccggctatcattatagtc |
214 |
Q |
| |
|
|||||||| | ||| ||||||||||| ||||| | ||||||||| ||||||| |||| ||||| ||||| |
|
|
| T |
26824105 |
acatggagaaattgcttcaatggaagaaggctctgaaacaagctgctgacttgtctggctttcattttagtc |
26824176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 110 - 269
Target Start/End: Original strand, 27679178 - 27679337
Alignment:
| Q |
110 |
agcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccggctatcatta |
209 |
Q |
| |
|
|||||||| |||||||||||||| | ||||||||||||| | ||| |||||| | ||||| | ||| |||||||||||||||||||| ||| | |
|
|
| T |
27679178 |
agcatgaaaagaggtttcaaaatgatccgaaaaacatggagaggttgcaaggatggaaaaaggctctgagccaggctgctaacttgtccggctaccatga |
27679277 |
T |
|
| Q |
210 |
tagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttc |
269 |
Q |
| |
|
|||||||| ||||||||| |||||||||||| | | ||||||| || | ||||||||||| |
|
|
| T |
27679278 |
tagtcctcctgggtacccaactttacttaaatcctatttttcccttttctattttatttc |
27679337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 25506961 - 25506852
Alignment:
| Q |
88 |
agttatggtgagcatcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctg |
187 |
Q |
| |
|
||||||||||| |||| | |||||||||||||| |||||||||||| |||||||||||||| || || ||||||||| |||||||| || ||| ||| |
|
|
| T |
25506961 |
agttatggtgaagatctgactaagcatgaagagaagtttcaaaataataagaaaaacatggagagatcgcatcaatggaaaatagctctaacacaatctg |
25506862 |
T |
|
| Q |
188 |
ctaacttgtc |
197 |
Q |
| |
|
||||| |||| |
|
|
| T |
25506861 |
ctaacctgtc |
25506852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 269
Target Start/End: Original strand, 26802748 - 26802833
Alignment:
| Q |
184 |
gctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttc |
269 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||| | ||||||| |||||||||||| | | ||||||| || ||||||||||||| |
|
|
| T |
26802748 |
gctgctaacttgtccggctaccatgatagtcctcctcggtacccaactttacttaaatcctatttttcccttttatattttatttc |
26802833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 269
Target Start/End: Complemental strand, 27592901 - 27592816
Alignment:
| Q |
184 |
gctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttc |
269 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||| ||||||||| |||||||||||| | | ||||||| || | ||||||||||| |
|
|
| T |
27592901 |
gctgctaacttgtccggctaccatgatagtcctcctgggtacccaactttacttaaatcctatttttcccttttctattttatttc |
27592816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 269
Target Start/End: Complemental strand, 27677495 - 27677410
Alignment:
| Q |
184 |
gctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttc |
269 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||| ||||||||| |||||||||||| | | ||||||| || | ||||||||||| |
|
|
| T |
27677495 |
gctgctaacttgtccggctaccatgatagtcctcctgggtacccaactttacttaaatcctatttttcccttttctattttatttc |
27677410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 269
Target Start/End: Complemental strand, 27706283 - 27706198
Alignment:
| Q |
184 |
gctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttc |
269 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||| ||||||||| |||||||||||| | | ||||||| || | ||||||||||| |
|
|
| T |
27706283 |
gctgctaacttgtccggctaccatgatagtcctcctgggtacccaactttacttaaatcctatttttcccttttctattttatttc |
27706198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 28786511 - 28786616
Alignment:
| Q |
111 |
gcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccggctatcattat |
210 |
Q |
| |
|
||||||| |||||||||||||| | || | ||||||||| | ||| |||||||||| | ||||| |||||||||||||||||||||||||| |||| | |
|
|
| T |
28786511 |
gcatgaaaagaggtttcaaaatgataaggataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattct |
28786610 |
T |
|
| Q |
211 |
agtcct |
216 |
Q |
| |
|
|||||| |
|
|
| T |
28786611 |
agtcct |
28786616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 28792632 - 28792737
Alignment:
| Q |
111 |
gcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccggctatcattat |
210 |
Q |
| |
|
||||||| |||||||||||||| | || | ||||||||| | ||| |||||||||| | ||||| |||||||||||||||||||||||||| |||| | |
|
|
| T |
28792632 |
gcatgaaaagaggtttcaaaatgataaggataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattct |
28792731 |
T |
|
| Q |
211 |
agtcct |
216 |
Q |
| |
|
|||||| |
|
|
| T |
28792732 |
agtcct |
28792737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 216
Target Start/End: Original strand, 28781373 - 28781477
Alignment:
| Q |
112 |
catgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccggctatcattata |
211 |
Q |
| |
|
|||||| |||||||||||||| | || | ||||||||| | ||| |||||||||| | ||||| |||||||||||||||||||||||||| |||| || |
|
|
| T |
28781373 |
catgaaaagaggtttcaaaatgataaggataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattcta |
28781472 |
T |
|
| Q |
212 |
gtcct |
216 |
Q |
| |
|
||||| |
|
|
| T |
28781473 |
gtcct |
28781477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 226
Target Start/End: Complemental strand, 27718440 - 27718218
Alignment:
| Q |
4 |
attcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtga-gcat |
102 |
Q |
| |
|
||||||||||||||||||||| || || | || || || ||||||| | |||||||||||| || | |||||||||| || ||||||||||| |||| |
|
|
| T |
27718440 |
attcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaacgtgcgacatcagaaaggtagttatggtgaagcat |
27718341 |
T |
|
| Q |
103 |
cttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccggct |
202 |
Q |
| |
|
| | |||||||| |||||||||||||| | |||| ||||||||| | ||| | |||||| | ||||| | ||| ||||||||||||||||||| |
|
|
| T |
27718340 |
-tggctgagcatgaaaagaggtttcaaaatgataagaataacatggagaggttgcagcgatggaaagtggctctgagccaggctgctaacttgtccggct |
27718242 |
T |
|
| Q |
203 |
atcattatagtcctcatgggtacc |
226 |
Q |
| |
|
| ||| ||||||||| |||||||| |
|
|
| T |
27718241 |
accatgatagtcctcctgggtacc |
27718218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 26848890 - 26848976
Alignment:
| Q |
108 |
taagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaactt |
194 |
Q |
| |
|
||||||||||||| ||||||||||||| || ||| ||||||||| ||||| ||||||||| |||||||| ||| ||||||||||| |
|
|
| T |
26848890 |
taagcatgaagaggtgtttcaaaataacaaggaaagcatggagcgtttgcgtaaatggaagaaagctcttaaccatgctgctaactt |
26848976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 26617858 - 26617952
Alignment:
| Q |
114 |
tgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccggctatcatt |
208 |
Q |
| |
|
|||||| ||||| ||||||||| || ||||||||||||| ||| |||||||||||||||||| ||||||| |||||| || |||||||||| |
|
|
| T |
26617858 |
tgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatt |
26617952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 26723786 - 26723880
Alignment:
| Q |
114 |
tgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccggctatcatt |
208 |
Q |
| |
|
|||||| ||||| ||||||||| || ||||||||||||| ||| |||||||||||||||||| ||||||| |||||| || |||||||||| |
|
|
| T |
26723786 |
tgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatt |
26723880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 43 - 176
Target Start/End: Original strand, 26949826 - 26949959
Alignment:
| Q |
43 |
gttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtga-gcatcttagtaagcatgaagagaggtttcaaaataacgagaaa |
141 |
Q |
| |
|
|||||||||||||| |||||| ||||| | |||||||||| | ||||||||||| ||| ||| |||||||||||||||||| ||||| | | | ||| |
|
|
| T |
26949826 |
gttttctatgatgtagaaccttctcacgtgcgacatcagaattatagttatggtgaagca-cttgctaagcatgaagagaggttccaaaagagcaaaaaa |
26949924 |
T |
|
| Q |
142 |
aacatggagcgactgcgtcaatggaagatagctct |
176 |
Q |
| |
|
||||||||||| ||| |||||||||||||||| |
|
|
| T |
26949925 |
aacatggagcggttgctgaaatggaagatagctct |
26949959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 26959396 - 26959482
Alignment:
| Q |
108 |
taagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaactt |
194 |
Q |
| |
|
||||||||||||| ||||||||||| | || ||||||||||||| ||| ||||||||| |||||||| ||||||||||||||| |
|
|
| T |
26959396 |
taagcatgaagagcagtttcaaaatagcaaggaaaacatggagcggttgctgaaatggaagaaagctcttaaccaagctgctaactt |
26959482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 26975282 - 26975368
Alignment:
| Q |
108 |
taagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaactt |
194 |
Q |
| |
|
||||||||||||| ||||||||||||| | ||||| ||||||| ||| | ||||||||| |||||||| ||||||||||||||| |
|
|
| T |
26975282 |
taagcatgaagaggggtttcaaaataaaaatgaaaacttggagcggttgcttaaatggaagaaagctcttaaccaagctgctaactt |
26975368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 25071889 - 25071975
Alignment:
| Q |
108 |
taagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaactt |
194 |
Q |
| |
|
||||||||||||| |||||||||||||| || || |||||||||| ||| |||||||| |||||||| | ||||||||||||| |
|
|
| T |
25071889 |
taagcatgaagaggggtttcaaaataacaaggaacacatggagcggttgctgacatggaagaaagctcttaacgaagctgctaactt |
25071975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 26623099 - 26623193
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatgg |
95 |
Q |
| |
|
||||||||||||||||| |||||| || | | || || ||||| ||||||| ||||| |||||||||||||| ||||| | |||||||||||| |
|
|
| T |
26623099 |
atcattcactgctacaaaacaaagggtcgtctcgttttgcccgtcttctatggcgtggatcctactcacatacggcatcaaactgggagttatgg |
26623193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 26729077 - 26729171
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatgg |
95 |
Q |
| |
|
||||||||||||||||| |||||| || | | || || ||||| ||||||| ||||| |||||||||||||| ||||| | |||||||||||| |
|
|
| T |
26729077 |
atcattcactgctacaaaacaaagggtcgtctcgttttgcccgtcttctatggcgtggatcctactcacatacggcatcaaactgggagttatgg |
26729171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 28098413 - 28098299
Alignment:
| Q |
21 |
aaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtga-gcatcttag-taagcatgaag |
118 |
Q |
| |
|
|||| ||||||| || ||||| |||| | ||| ||||||||| ||||| | |||||||||| |||||||||||||| |||| ||| ||||||||||| |
|
|
| T |
28098413 |
aaagggttgcttcgtttttcctattttttgtgacgtggaaccttctcacgtgcgacatcagacggggagttatggtgaagcat--tagctaagcatgaag |
28098316 |
T |
|
| Q |
119 |
agaggtttcaaaataac |
135 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
28098315 |
agaggttccaaaataac |
28098299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 27698375 - 27698319
Alignment:
| Q |
184 |
gctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaaa |
240 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
27698375 |
gctgctaacttgtccggctaccatgatagtcctcccaggtacccaactttacttaaa |
27698319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 26635920 - 26636006
Alignment:
| Q |
108 |
taagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaactt |
194 |
Q |
| |
|
|||||||||||| ||||||||||| | || ||||||||||| | ||| ||||||||| |||||||| ||||||||||||||| |
|
|
| T |
26635920 |
taagcatgaagatcagtttcaaaatagcaaggaaaacatggagtggttgctgaaatggaagaaagctcttaaccaagctgctaactt |
26636006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 26741886 - 26741972
Alignment:
| Q |
108 |
taagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaactt |
194 |
Q |
| |
|
|||||||||||| ||||||||||| | || ||||||||||| | ||| ||||||||| |||||||| ||||||||||||||| |
|
|
| T |
26741886 |
taagcatgaagatcagtttcaaaatagcaaggaaaacatggagtggttgctgaaatggaagaaagctcttaaccaagctgctaactt |
26741972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 26884468 - 26884561
Alignment:
| Q |
181 |
caagctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttcattaattt |
277 |
Q |
| |
|
|||| |||||||||||||||||| |||| ||||| | ||||| ||||||||||||||| | | |||| | ||| |||||||| |||| ||||||| |
|
|
| T |
26884468 |
caagttgctaacttgtccggctaccattttagtctt---gggtatcccactttacttaaatcatattttccttttttatattttctttctttaattt |
26884561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 277
Target Start/End: Complemental strand, 27531048 - 27530988
Alignment:
| Q |
217 |
catgggtaccccactttacttaaaacttgtttttcctttctatattttatttcattaattt |
277 |
Q |
| |
|
|||||||| ||||||||||||||| | | ||||||| || |||||||| |||| ||||||| |
|
|
| T |
27531048 |
catgggtagcccactttacttaaatcctatttttcccttttatattttctttctttaattt |
27530988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 28098261 - 28098221
Alignment:
| Q |
161 |
aatggaagatagctcttacccaagctgctaacttgtccggc |
201 |
Q |
| |
|
|||||||||| ||||||| |||||| ||||||||||||||| |
|
|
| T |
28098261 |
aatggaagatggctcttaaccaagcagctaacttgtccggc |
28098221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 29826193 - 29826245
Alignment:
| Q |
44 |
ttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggt |
96 |
Q |
| |
|
|||||||||||||||| ||| |||| | |||||||||| ||||||||||||| |
|
|
| T |
29826193 |
ttttctatgatgtggatccttctcatgtgcgacatcagactgggagttatggt |
29826245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 31284571 - 31284607
Alignment:
| Q |
161 |
aatggaagatagctcttacccaagctgctaacttgtc |
197 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
31284571 |
aatggaagatagctcttactcaagcagctaacttgtc |
31284607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 18699451 - 18699175
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
||||||||||||||||||||||| || | | || || || |||||||||| || || |||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
18699451 |
atcattcactgctacaagacaaaaggtcgtctcgttttgcctgttttctatggcgtagatcctactcacatacgacatcaaagtgggagttatggtgaac |
18699352 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||| | |||||| | | |||| || ||||||||| |||||||||||||||| ||| |||||||||| ||||||| ||| ||||||||||||||||||| |
|
|
| T |
18699351 |
atctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccgaagctgctaacttgtccgg |
18699252 |
T |
|
| Q |
201 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttcattaatttttat |
281 |
Q |
| |
|
||| |||| |||| | ||||||| || |||||||||| |||| ||||||||| | ||||||||| ||||||||||| |
|
|
| T |
18699251 |
ctaccattttagttc---tgggtactcctctttacttaattcttg-ttttcctttttgcattttatttatttaatttttat |
18699175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 18731555 - 18731268
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
||||| |||||||||||||||||| || | | || || || |||||||||| ||||| |||| ||||||||||||||| ||||||||||||||||| | |
|
|
| T |
18731555 |
atcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaac |
18731456 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||| | |||||| || |||| || ||||||||| |||||||||||||||| ||| |||||||||| | ||||| ||| ||||||||||||||||||| |
|
|
| T |
18731455 |
atctcactaagcacaaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttggctctgaccgaagctgctaacttgtccgg |
18731356 |
T |
|
| Q |
201 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttcattaatttttatgcctaaataat |
292 |
Q |
| |
|
||| |||| ||| |||||||||| || |||||||||| |||| |||||| || | ||||||||| ||||||||||| ||| |||||| |
|
|
| T |
18731355 |
ctaccattttag---tcatgggtactcctctttacttaattcttg-ttttccattttgcattttatttatttaatttttattcctcaataat |
18731268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 18679618 - 18679331
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
|||||||||||||||||||||||| || | | || || || |||||||||| ||||| |||||||||||| ||||||| ||||| ||||||||||| | |
|
|
| T |
18679618 |
atcattcactgctacaagacaaagggtcgtcttgttttgcctgttttctatgtcgtggatcctactcacatatgacatcaaagtggtagttatggtgaac |
18679519 |
T |
|
| Q |
101 |
atcttagtaagca-tgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccg |
199 |
Q |
| |
|
|||| | ||| || |||| |||| || ||||||||| | |||||||||||||| ||| |||||||||| ||||||| ||| |||||||||||||||||| |
|
|
| T |
18679518 |
atctcactaatcactgaa-agagtttccaaaataacaataaaaacatggagcggttgcatcaatggaagttagctctgaccgaagctgctaacttgtccg |
18679420 |
T |
|
| Q |
200 |
gctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatattttatttcattaatttttatgcctaaataat |
292 |
Q |
| |
|
|||| |||| |||||| ||||||| || |||||||||| |||| ||||||||| | ||||||||| ||||| ||||| ||| |||||| |
|
|
| T |
18679419 |
gctaccattttagtcc---tgggtactcctctttacttaattcttg-ttttcctttttgcattttatttatttaatatttattcctcaataat |
18679331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 18655528 - 18655313
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
|||||||||||||||||||||||| || | | || ||||| |||||||||| ||||| |||||||||||||||||||| | ||| ||||||||||| | |
|
|
| T |
18655528 |
atcattcactgctacaagacaaagggtcgtctcgtttttcctgttttctatggcgtggatcctactcacatacgacatcaaactggaagttatggtgaac |
18655429 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||| | |||||| | ||| || ||||||||| |||||||||||||||| ||| |||||||||| | ||||| ||| ||||||||||||||||||| |
|
|
| T |
18655428 |
atctcactaagcacagaaagaatttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttggctctgaccgaagctgctaacttgtccgg |
18655329 |
T |
|
| Q |
201 |
ctatcattatagtcct |
216 |
Q |
| |
|
||| |||| ||||||| |
|
|
| T |
18655328 |
ctaccattctagtcct |
18655313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 18724136 - 18723891
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
||||| |||||||||||||||||| || | | || || || |||||||||| ||||| |||| |||||||||||| || ||||||||||||||||| | |
|
|
| T |
18724136 |
atcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacaccaaagtgggagttatggtgaac |
18724037 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||| | |||||| || ||| || ||||||||| |||||||||||||||| ||| |||||||||| | ||||| ||| ||||||||||||||||||| |
|
|
| T |
18724036 |
atctcactaagcacaaaatgagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttggctctgaccgaagctgctaacttgtccgg |
18723937 |
T |
|
| Q |
201 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttt |
249 |
Q |
| |
|
||| |||| |||||| ||||||| || |||||||||| |||||||| |
|
|
| T |
18723936 |
ctaccattttagtcc---tgggtactcctctttacttaattcttgtttt |
18723891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 95; Significance: 2e-46; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 28127730 - 28127485
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
|||||||||||||||||||||||| || || |||| || || ||||||| || ||||| |||||| | | ||| |||| | |||||||||||||| |
|
|
| T |
28127730 |
atcattcactgctacaagacaaagggtcgcctagttttgcctgttttctttggcgtggatcctactgatgtgcgatatcatacagggagttatggtgaag |
28127631 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
| ||| |||||||| ||||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
28127630 |
agcttgctaagcatggagagaggttccaaaataacaagaaaaacatggagcgattgcaccaatggaagatagctctaacccaagctgctaacttgtccgg |
28127531 |
T |
|
| Q |
201 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttt |
249 |
Q |
| |
|
||| ||||||||||| |||||||| ||| |||||||| |||||||| |
|
|
| T |
28127530 |
ctaccattatagtcc---agggtaccctactatacttaaatcttgtttt |
28127485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 28164413 - 28164154
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
|||||||||||||||||||||||| || || |||| || || ||||||| || ||||| |||||| | | |||||||| | ||||||||||| | |
|
|
| T |
28164413 |
atcattcactgctacaagacaaagggtcgcctagttttgcctgttttct-tggcgtggatcctactgatgtgcgacatcatacagggagttatggcaaag |
28164315 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||||| |||||||| |||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
28164314 |
atcttactaagcatggtgagaggttccaaaataacaagaaaaacatggagcgattgcaccaatggaagatagctctaacccaagctgctaacttgtccgg |
28164215 |
T |
|
| Q |
201 |
ctatcattatagtcctcatgggtaccccactttacttaaaacttgtttttcctttctatatttt |
264 |
Q |
| |
|
||| ||||||||||| ||||||| || |||||||| |||||||||||| | |||||||| |
|
|
| T |
28164214 |
ctaccattatagtcc---agggtaccttacaatacttaaatcttgtttttcctctttatatttt |
28164154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 268408 - 268195
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
||||||||||||||||||| |||| || | | | || ||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
268408 |
atcattcactgctacaagaaaaagggtcgtctcattttgcccgtcttctatggcgtggatcctactcacatacgacatcaaagtgggagttatggtgaac |
268309 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||| | |||||| |||||||| || ||||||| | |||||||||||||||| ||| |||||||||| | ||||| ||||||||| |||||||||| || |
|
|
| T |
268308 |
atctcactaagcacgaagagagtttccaaaatagcaagaaaaacatggagcggttgcatcaatggaagttggctctgacccaagcttctaacttgtctgg |
268209 |
T |
|
| Q |
201 |
ctatcattatagtc |
214 |
Q |
| |
|
||| |||| ||||| |
|
|
| T |
268208 |
ctaccattctagtc |
268195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 29273834 - 29273621
Alignment:
| Q |
1 |
atcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagc |
100 |
Q |
| |
|
|||||||||||||||||||||||| || | | | || || || ||||||| ||||| |||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
29273834 |
atcattcactgctacaagacaaagggtcgtctcattttgcctgtcttctatggcgtggatcctactcacatacgacatcaaagtgggagttatggtgaac |
29273735 |
T |
|
| Q |
101 |
atcttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccgg |
200 |
Q |
| |
|
|||| | |||| | |||||||| || ||||||| | ||||||||||||| || ||| |||||||||| | ||||| ||||||||| |||||||||| || |
|
|
| T |
29273734 |
atctcactaagtacgaagagagtttccaaaatagcaagaaaaacatggatcggttgcatcaatggaagttggctctgacccaagcttctaacttgtctgg |
29273635 |
T |
|
| Q |
201 |
ctatcattatagtc |
214 |
Q |
| |
|
||| |||| ||||| |
|
|
| T |
29273634 |
ctaccattctagtc |
29273621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 7759 - 7861
Alignment:
| Q |
112 |
catgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccggctatcattata |
211 |
Q |
| |
|
|||||| |||||||||||||| | |||| |||||||||||| ||| |||||||||| | ||||| |||||||||||||||||||||||||| |||| || |
|
|
| T |
7759 |
catgaaaagaggtttcaaaatgataagaataacatggagcgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattcta |
7858 |
T |
|
| Q |
212 |
gtc |
214 |
Q |
| |
|
||| |
|
|
| T |
7859 |
gtc |
7861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 13585 - 13483
Alignment:
| Q |
112 |
catgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccggctatcattata |
211 |
Q |
| |
|
|||||| |||||||||||||| | |||| |||||||||||| ||| |||||||||| | ||||| |||||||||||||||||||||||||| |||| || |
|
|
| T |
13585 |
catgaaaagaggtttcaaaatgataagaataacatggagcgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattcta |
13486 |
T |
|
| Q |
212 |
gtc |
214 |
Q |
| |
|
||| |
|
|
| T |
13485 |
gtc |
13483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 214
Target Start/End: Complemental strand, 4732 - 4522
Alignment:
| Q |
4 |
attcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtga-gcat |
102 |
Q |
| |
|
||||||||||||||||||||| || || | || || || ||||||| | |||||||||||| || | ||||||| || || ||||||||||| |||| |
|
|
| T |
4732 |
attcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaacgtgcgacatctgaaaggtagttatggtgaagcat |
4633 |
T |
|
| Q |
103 |
cttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccggct |
202 |
Q |
| |
|
| | |||||||| |||||||||||||| | |||| ||||||||| | ||| |||||||||| | ||||| ||||||||||||||||||||||||| |
|
|
| T |
4632 |
-tggctgagcatgaaaagaggtttcaaaatgataagaataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggct |
4534 |
T |
|
| Q |
203 |
atcattatagtc |
214 |
Q |
| |
|
| |||| ||||| |
|
|
| T |
4533 |
accattctagtc |
4522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 226
Target Start/End: Complemental strand, 14417 - 14195
Alignment:
| Q |
4 |
attcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtga-gcat |
102 |
Q |
| |
|
||||||||||||||||||||| || || | || || || ||||||| | |||||||||||| || | |||||||||| || ||||||||||| |||| |
|
|
| T |
14417 |
attcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaacgtgcgacatcagaaaggtagttatggtgaagcat |
14318 |
T |
|
| Q |
103 |
cttagtaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccggct |
202 |
Q |
| |
|
| | |||||||| |||||||||||||| | ||||||||||||| | ||| |||||| ||||| | ||| ||||||||||||||||||| |
|
|
| T |
14317 |
-tggctgagcatgaaaagaggtttcaaaatgatccgaaaaacatggagaggttgcagggatggaaagaggctctgagccaggctgctaacttgtccggct |
14219 |
T |
|
| Q |
203 |
atcattatagtcctcatgggtacc |
226 |
Q |
| |
|
| ||| ||||||||| |||||||| |
|
|
| T |
14218 |
accatgatagtcctcctgggtacc |
14195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 3376 - 3259
Alignment:
| Q |
110 |
agcatgaagagaggtttcaaaataa--cgagaaaaacatggagcgactgcgtcaatggaagatagctcttacccaagctgctaacttgtccggctatcat |
207 |
Q |
| |
|
|||||||| |||||||||||||| | ||| |||||||||||| | ||| | |||||| | ||||| | ||| |||||||||||||||||||| ||| |
|
|
| T |
3376 |
agcatgaaaagaggtttcaaaatgatccga-aaaaacatggagaggttgcagcgatggaaagtggctctgagccaggctgctaacttgtccggctaccat |
3278 |
T |
|
| Q |
208 |
tatagtcctcatgggtacc |
226 |
Q |
| |
|
||||||||| |||||||| |
|
|
| T |
3277 |
gatagtcctcctgggtacc |
3259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 3279857 - 3279908
Alignment:
| Q |
44 |
ttttctatgatgtggaacctactcacatacgacatcagagtgggagttatgg |
95 |
Q |
| |
|
|||||||||||||||||||| | ||| | |||||||||| |||||||||||| |
|
|
| T |
3279857 |
ttttctatgatgtggaaccttcccacgtgcgacatcagactgggagttatgg |
3279908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 3279986 - 3280026
Alignment:
| Q |
161 |
aatggaagatagctcttacccaagctgctaacttgtccggc |
201 |
Q |
| |
|
|||||||||| ||||||| |||||| ||||||||||||||| |
|
|
| T |
3279986 |
aatggaagatggctcttaaccaagcagctaacttgtccggc |
3280026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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