View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16784_high_5 (Length: 398)
Name: NF16784_high_5
Description: NF16784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16784_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 335; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 9 - 379
Target Start/End: Original strand, 22653708 - 22654078
Alignment:
| Q |
9 |
gagaagcaaaggagagagacccgagattcatacccattaacccggttgtgttaaaatctccatcagagtttgtgctaatgcttgagtccatacacccaaa |
108 |
Q |
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| T |
22653708 |
gagaaacaaaagagagagacccgagattcatacccattaacccggttgtgttaaaatctccatcagagtttgtgctaatgcttgagtccatacacccaaa |
22653807 |
T |
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| Q |
109 |
tacaattcccgggttatcggatcctccaaacccgaatgaatcagaagcaaggttcccttcagaggaagaaaaatctgcgtatgaaagagttgcatggcaa |
208 |
Q |
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| T |
22653808 |
tacaattcccgggttatcggatgctccaaacccgaatgaatcagaagcaaggttcccttcagaggaagaaaaatctgcgtatgaaagagttgcatggcaa |
22653907 |
T |
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| Q |
209 |
tgattgttggagtcacatgaagcaggtatgggaaaatctcgggtttgagtagtgcatgtagatgaagaacaagaaataggtttgtaagaagaagaaaaat |
308 |
Q |
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| T |
22653908 |
tgattgttggagtcgcatgaagcaggtatgggaaaatctcgggtttgggtagtgcatgtagatgaagaacaagaaataggtttgtatgaagaagaaaaat |
22654007 |
T |
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| Q |
309 |
tcgggttaaataccgggtcgagcatgacccggtttgttgagttgttgcaatgaagccatgaaagttcactt |
379 |
Q |
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|||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22654008 |
tcgggttaaaaaccgggtcaggcatgacccggtttgttgagttgttgcaatgaagccatgaaagttcactt |
22654078 |
T |
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