View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16785_low_6 (Length: 272)
Name: NF16785_low_6
Description: NF16785
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16785_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 40363167 - 40363429
Alignment:
| Q |
1 |
gtacggtattacactacactctcactggtttcattcaaactctggttaaaatcttgcttagaaattagattatatctccatactatttaattgannnnnn |
100 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40363167 |
gtacggtattacactacactctcattggtttcattcaaactctggttaaaatcttgcttagaaattagattatatctccatactatttaattgatttttt |
40363266 |
T |
|
| Q |
101 |
nctt------ataggtttctattccaaatggacaatgatggaaatttcgaatggttcttgggaagggagttccaaatagtattgtatatgggaaatattt |
194 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40363267 |
ttttttttttataggtttctattccaaatggacaatgatggaaatttcgaatggttcttgggaagggagttccaaatagtattgtatatgggaaatattt |
40363366 |
T |
|
| Q |
195 |
tgtcggggagggtaattgactataccaatgatgctgggtggttcgtagttcaatatgaagatg |
257 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40363367 |
tgtcggggagggtaattgactataccaatgatgctgggtggttcgtagttcaatatgaagatg |
40363429 |
T |
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