View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16790_high_18 (Length: 252)
Name: NF16790_high_18
Description: NF16790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16790_high_18 |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 10 - 236
Target Start/End: Complemental strand, 45557521 - 45557295
Alignment:
| Q |
10 |
tgagatgaagggtttgtgctttgtagtcatagaaatagaatagaatcaaacttatactatgataactcattcttaggtttataataaattgattttgtat |
109 |
Q |
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| T |
45557521 |
tgagaagaagggtttgtgctttgtagtcatagaaatagaatagaatcaaacttatactatgataactcattcttaggtttataataaattgattttgtat |
45557422 |
T |
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| Q |
110 |
tacatgatttattttataagcttgcaaatatttgctaacacatcacaacgtgattcttgacttttgatttggtagttttttcataccagctgctgctagc |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45557421 |
tacatgatttattttataagcttgcaaatatttgctaacacatcacaacgtgattcttgacttttgatttggtagttttttcataccagctgctgctagc |
45557322 |
T |
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| Q |
210 |
atggattttagtgatgttaacaaagta |
236 |
Q |
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||||||||||||||||||||||||||| |
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| T |
45557321 |
atggattttagtgatgttaacaaagta |
45557295 |
T |
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