View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16791_high_19 (Length: 309)

Name: NF16791_high_19
Description: NF16791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16791_high_19
NF16791_high_19
[»] chr2 (26 HSPs)
chr2 (20-214)||(45104042-45104236)
chr2 (20-207)||(45130668-45130855)
chr2 (215-292)||(8710817-8710894)
chr2 (214-284)||(28226101-28226171)
chr2 (215-284)||(15604339-15604408)
chr2 (216-292)||(11830365-11830441)
chr2 (218-292)||(8342528-8342602)
chr2 (216-281)||(41588418-41588483)
chr2 (218-282)||(6573050-6573114)
chr2 (218-284)||(8342190-8342256)
chr2 (218-284)||(15604696-15604762)
chr2 (215-284)||(6573543-6573612)
chr2 (212-284)||(25892391-25892463)
chr2 (215-284)||(14900496-14900565)
chr2 (215-284)||(41587235-41587303)
chr2 (205-284)||(14900809-14900888)
chr2 (209-284)||(33739697-33739772)
chr2 (215-284)||(1695740-1695809)
chr2 (215-284)||(13995673-13995742)
chr2 (215-284)||(13996001-13996070)
chr2 (215-284)||(33062050-33062119)
chr2 (215-284)||(33062378-33062447)
chr2 (224-282)||(28228679-28228737)
chr2 (215-284)||(33740031-33740100)
chr2 (215-284)||(41248887-41248956)
chr2 (224-284)||(15848097-15848157)
[»] chr7 (35 HSPs)
chr7 (218-292)||(10600298-10600372)
chr7 (215-292)||(32934697-32934774)
chr7 (214-292)||(42617910-42617988)
chr7 (215-292)||(25453128-25453205)
chr7 (215-292)||(43266266-43266343)
chr7 (215-292)||(43266615-43266692)
chr7 (218-292)||(46204424-46204498)
chr7 (215-292)||(27138290-27138367)
chr7 (211-284)||(32068453-32068526)
chr7 (215-292)||(33828323-33828400)
chr7 (217-292)||(25628827-25628902)
chr7 (210-284)||(10600021-10600095)
chr7 (218-284)||(25628481-25628547)
chr7 (218-284)||(28890582-28890648)
chr7 (218-284)||(32068099-32068165)
chr7 (218-292)||(32934351-32934425)
chr7 (218-284)||(42618268-42618334)
chr7 (214-284)||(22081916-22081986)
chr7 (215-284)||(23058786-23058855)
chr7 (214-266)||(22081559-22081611)
chr7 (213-284)||(23058427-23058498)
chr7 (218-284)||(25453485-25453551)
chr7 (218-284)||(39274873-39274939)
chr7 (215-292)||(32680595-32680672)
chr7 (224-284)||(18087697-18087757)
chr7 (215-284)||(32680923-32680992)
chr7 (215-284)||(30948488-30948557)
chr7 (224-289)||(32688572-32688637)
chr7 (215-284)||(34928650-34928719)
chr7 (215-284)||(34928978-34929047)
chr7 (215-284)||(39686862-39686931)
chr7 (215-291)||(27396947-27397023)
chr7 (224-292)||(13044681-13044749)
chr7 (224-284)||(13050140-13050200)
chr7 (224-292)||(37656861-37656929)
[»] chr4 (55 HSPs)
chr4 (215-292)||(54858560-54858637)
chr4 (215-284)||(3032582-3032651)
chr4 (213-292)||(10407887-10407966)
chr4 (217-284)||(45463075-45463142)
chr4 (214-284)||(10408246-10408316)
chr4 (215-284)||(27069267-27069336)
chr4 (215-284)||(52573228-52573297)
chr4 (215-284)||(52573585-52573654)
chr4 (215-284)||(54858917-54858986)
chr4 (215-290)||(22987202-22987277)
chr4 (218-284)||(11523952-11524018)
chr4 (218-292)||(39701258-39701332)
chr4 (215-284)||(27068910-27068979)
chr4 (215-284)||(51859763-51859832)
chr4 (218-290)||(22717942-22718014)
chr4 (212-284)||(45463430-45463502)
chr4 (215-283)||(50504183-50504251)
chr4 (217-284)||(39666772-39666839)
chr4 (218-284)||(5818132-5818198)
chr4 (215-276)||(16605602-16605663)
chr4 (215-284)||(27149353-27149421)
chr4 (215-281)||(27891584-27891650)
chr4 (215-284)||(22567114-22567183)
chr4 (215-282)||(50503825-50503892)
chr4 (214-292)||(4983046-4983124)
chr4 (215-284)||(9400519-9400588)
chr4 (218-290)||(39700912-39700984)
chr4 (226-292)||(22923149-22923215)
chr4 (226-292)||(22927802-22927868)
chr4 (226-292)||(22984081-22984147)
chr4 (226-292)||(22997669-22997735)
chr4 (218-284)||(39667133-39667199)
chr4 (215-289)||(50751852-50751925)
chr4 (215-292)||(14801736-14801813)
chr4 (215-284)||(27934532-27934601)
chr4 (223-284)||(27934846-27934907)
chr4 (215-284)||(34837074-34837143)
chr4 (215-284)||(34837402-34837471)
chr4 (215-284)||(38012498-38012567)
chr4 (215-284)||(42738359-42738428)
chr4 (215-284)||(51203609-51203678)
chr4 (214-282)||(4982725-4982793)
chr4 (212-284)||(38012167-38012239)
chr4 (224-292)||(52909262-52909330)
chr4 (217-284)||(9400847-9400914)
chr4 (222-284)||(9144773-9144835)
chr4 (238-284)||(50750910-50750956)
chr4 (92-205)||(1841244-1841357)
chr4 (215-284)||(9145094-9145163)
chr4 (215-284)||(32950142-32950211)
chr4 (215-284)||(32950470-32950539)
chr4 (215-284)||(42738031-42738100)
chr4 (240-284)||(6237179-6237223)
chr4 (224-292)||(15508024-15508091)
chr4 (224-284)||(30642505-30642565)
[»] chr8 (44 HSPs)
chr8 (217-292)||(44664857-44664932)
chr8 (215-292)||(35634448-35634525)
chr8 (218-292)||(8997859-8997933)
chr8 (214-284)||(15229930-15230000)
chr8 (215-284)||(7983428-7983497)
chr8 (211-284)||(44664504-44664577)
chr8 (217-292)||(8998038-8998113)
chr8 (218-284)||(10445692-10445758)
chr8 (218-284)||(37542227-37542293)
chr8 (218-292)||(42945463-42945537)
chr8 (215-292)||(15230280-15230357)
chr8 (215-292)||(41353922-41353999)
chr8 (218-284)||(6471693-6471759)
chr8 (218-284)||(25124566-25124632)
chr8 (215-281)||(25124923-25124989)
chr8 (218-284)||(38003763-38003829)
chr8 (218-292)||(41353577-41353651)
chr8 (215-284)||(234097-234166)
chr8 (215-284)||(710508-710577)
chr8 (215-284)||(747720-747789)
chr8 (215-284)||(871615-871684)
chr8 (213-261)||(6472395-6472443)
chr8 (211-281)||(21432689-21432759)
chr8 (215-284)||(11675022-11675091)
chr8 (215-282)||(23505052-23505119)
chr8 (215-284)||(23507784-23507853)
chr8 (218-281)||(27500092-27500155)
chr8 (218-284)||(36325562-36325628)
chr8 (215-284)||(2266492-2266561)
chr8 (215-284)||(2266820-2266889)
chr8 (215-292)||(4995008-4995084)
chr8 (215-284)||(11674695-11674764)
chr8 (215-284)||(38845627-38845696)
chr8 (215-292)||(39071676-39071753)
chr8 (224-284)||(10749867-10749927)
chr8 (214-284)||(40775978-40776048)
chr8 (222-284)||(44406864-44406926)
chr8 (214-284)||(44407185-44407255)
chr8 (224-289)||(11763030-11763095)
chr8 (227-284)||(27500435-27500492)
chr8 (215-284)||(40318323-40318392)
chr8 (224-284)||(2535909-2535969)
chr8 (214-282)||(8746323-8746391)
chr8 (218-262)||(37542604-37542648)
[»] chr6 (26 HSPs)
chr6 (209-284)||(6517497-6517572)
chr6 (218-292)||(22502777-22502851)
chr6 (218-284)||(7160807-7160873)
chr6 (218-292)||(31407227-31407301)
chr6 (215-292)||(21836379-21836456)
chr6 (215-284)||(22503131-22503200)
chr6 (216-284)||(7905244-7905312)
chr6 (214-284)||(31406877-31406947)
chr6 (215-292)||(32593490-32593567)
chr6 (218-281)||(15913551-15913614)
chr6 (213-284)||(21836030-21836100)
chr6 (215-292)||(7161153-7161230)
chr6 (215-266)||(10781147-10781198)
chr6 (218-281)||(12065223-12065285)
chr6 (215-281)||(14196615-14196681)
chr6 (216-284)||(14196943-14197011)
chr6 (218-281)||(7905603-7905666)
chr6 (215-262)||(15913927-15913974)
chr6 (214-284)||(363158-363228)
chr6 (218-284)||(25485956-25486022)
chr6 (224-284)||(28498384-28498444)
chr6 (212-284)||(30337777-30337849)
chr6 (209-284)||(362864-362939)
chr6 (215-292)||(21628064-21628141)
chr6 (215-284)||(22373016-22373085)
chr6 (224-284)||(15116591-15116651)
[»] chr1 (44 HSPs)
chr1 (213-284)||(17188952-17189023)
chr1 (215-281)||(8898517-8898583)
chr1 (215-292)||(37929418-37929495)
chr1 (215-284)||(40714800-40714869)
chr1 (215-284)||(45750199-45750268)
chr1 (215-281)||(30326496-30326562)
chr1 (214-284)||(49955346-49955416)
chr1 (215-284)||(17189208-17189277)
chr1 (215-284)||(20760862-20760931)
chr1 (215-284)||(31050950-31051019)
chr1 (215-284)||(40714444-40714513)
chr1 (215-292)||(45749842-45749919)
chr1 (215-284)||(49955704-49955773)
chr1 (215-278)||(25885356-25885419)
chr1 (218-292)||(35040963-35041037)
chr1 (215-292)||(8898866-8898943)
chr1 (215-282)||(31058416-31058483)
chr1 (215-281)||(7371529-7371595)
chr1 (215-281)||(28325164-28325229)
chr1 (215-284)||(12906016-12906085)
chr1 (215-284)||(24905167-24905236)
chr1 (215-284)||(28011696-28011765)
chr1 (215-292)||(28324805-28324881)
chr1 (215-259)||(25884701-25884745)
chr1 (217-263)||(44523516-44523562)
chr1 (215-284)||(32558464-32558533)
chr1 (218-278)||(7371293-7371353)
chr1 (212-284)||(33442591-33442663)
chr1 (215-284)||(5734010-5734078)
chr1 (215-292)||(7820954-7821031)
chr1 (212-284)||(33442922-33442994)
chr1 (212-292)||(40772504-40772584)
chr1 (224-292)||(46163039-46163107)
chr1 (237-292)||(41098755-41098810)
chr1 (214-284)||(6367561-6367631)
chr1 (218-284)||(35038458-35038524)
chr1 (215-284)||(23209686-23209755)
chr1 (215-292)||(36694599-36694676)
chr1 (215-292)||(36710700-36710777)
chr1 (215-284)||(52134068-52134137)
chr1 (215-284)||(52134396-52134465)
chr1 (224-284)||(13300263-13300323)
chr1 (214-282)||(34464448-34464516)
chr1 (224-284)||(35152689-35152749)
[»] chr3 (48 HSPs)
chr3 (218-292)||(3596112-3596186)
chr3 (218-284)||(32306781-32306847)
chr3 (211-292)||(10294563-10294644)
chr3 (219-284)||(29118895-29118960)
chr3 (215-284)||(40788777-40788846)
chr3 (217-292)||(29685943-29686018)
chr3 (210-284)||(37778630-37778704)
chr3 (215-284)||(3469200-3469269)
chr3 (215-292)||(32306424-32306501)
chr3 (215-284)||(52032496-52032565)
chr3 (218-282)||(33156355-33156419)
chr3 (215-282)||(13948780-13948847)
chr3 (217-284)||(29686297-29686364)
chr3 (215-284)||(3469557-3469626)
chr3 (215-284)||(33506307-33506376)
chr3 (217-281)||(29118529-29118593)
chr3 (217-284)||(11910701-11910768)
chr3 (214-265)||(13949071-13949122)
chr3 (214-284)||(42855664-42855734)
chr3 (215-281)||(47551493-47551559)
chr3 (218-284)||(52032141-52032207)
chr3 (215-292)||(10294908-10294985)
chr3 (212-281)||(33506175-33506244)
chr3 (229-284)||(35643865-35643920)
chr3 (218-292)||(41421975-41422049)
chr3 (215-284)||(36314298-36314367)
chr3 (218-284)||(10770493-10770559)
chr3 (218-292)||(40788423-40788497)
chr3 (214-289)||(33154876-33154951)
chr3 (215-289)||(4322592-4322665)
chr3 (214-284)||(36314626-36314696)
chr3 (215-284)||(8041616-8041685)
chr3 (215-284)||(48322377-48322446)
chr3 (215-284)||(48322705-48322774)
chr3 (224-284)||(43607789-43607849)
chr3 (237-284)||(2796201-2796248)
chr3 (228-283)||(3596432-3596486)
chr3 (224-283)||(23276343-23276402)
chr3 (218-281)||(43998148-43998211)
chr3 (238-284)||(4323561-4323607)
chr3 (218-284)||(10770819-10770885)
chr3 (214-284)||(40758146-40758216)
chr3 (215-284)||(25107213-25107282)
chr3 (215-284)||(40758469-40758538)
chr3 (224-289)||(47856396-47856461)
chr3 (224-284)||(1079580-1079640)
chr3 (224-284)||(6956257-6956317)
chr3 (206-262)||(47921457-47921513)
[»] scaffold0006 (2 HSPs)
scaffold0006 (215-292)||(222138-222215)
scaffold0006 (213-284)||(221789-221859)
[»] scaffold0771 (2 HSPs)
scaffold0771 (215-282)||(920-987)
scaffold0771 (214-265)||(1211-1262)
[»] chr5 (31 HSPs)
chr5 (213-284)||(8875447-8875518)
chr5 (215-282)||(20153274-20153341)
chr5 (214-284)||(20152780-20152850)
chr5 (215-284)||(17544405-17544474)
chr5 (221-284)||(8875624-8875687)
chr5 (215-281)||(3656778-3656844)
chr5 (215-284)||(33871695-33871764)
chr5 (230-282)||(22298557-22298609)
chr5 (214-281)||(33871338-33871405)
chr5 (224-292)||(5024369-5024437)
chr5 (214-282)||(21288016-21288084)
chr5 (224-292)||(38442077-38442145)
chr5 (214-284)||(31482401-31482471)
chr5 (214-292)||(35920535-35920613)
chr5 (218-284)||(41930844-41930910)
chr5 (215-284)||(297014-297083)
chr5 (215-284)||(1505967-1506036)
chr5 (215-284)||(20814494-20814563)
chr5 (215-284)||(31482730-31482799)
chr5 (210-282)||(13362589-13362661)
chr5 (240-292)||(17202424-17202476)
chr5 (224-284)||(24141461-24141521)
chr5 (224-284)||(40150173-40150233)
chr5 (237-284)||(6757887-6757934)
chr5 (215-262)||(6758215-6758262)
chr5 (222-284)||(1506295-1506357)
chr5 (215-284)||(41930516-41930585)
chr5 (244-292)||(17544077-17544125)
chr5 (209-281)||(18247080-18247152)
chr5 (220-292)||(30005158-30005230)
chr5 (224-284)||(39453309-39453369)
[»] scaffold0388 (1 HSPs)
scaffold0388 (218-284)||(12596-12662)
[»] scaffold0328 (2 HSPs)
scaffold0328 (215-284)||(11497-11566)
scaffold0328 (218-282)||(11143-11207)
[»] scaffold0599 (1 HSPs)
scaffold0599 (217-284)||(2395-2462)
[»] scaffold0205 (2 HSPs)
scaffold0205 (215-284)||(21009-21078)
scaffold0205 (214-282)||(21299-21367)
[»] scaffold0042 (1 HSPs)
scaffold0042 (217-284)||(12137-12204)
[»] scaffold0005 (1 HSPs)
scaffold0005 (215-292)||(37914-37991)
[»] scaffold0559 (1 HSPs)
scaffold0559 (214-284)||(1232-1302)
[»] scaffold0031 (1 HSPs)
scaffold0031 (214-284)||(68964-69034)
[»] scaffold0075 (1 HSPs)
scaffold0075 (215-284)||(14429-14498)
[»] scaffold0024 (1 HSPs)
scaffold0024 (215-284)||(141922-141991)
[»] scaffold0008 (1 HSPs)
scaffold0008 (224-284)||(239910-239970)


Alignment Details
Target: chr2 (Bit Score: 183; Significance: 5e-99; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 45104042 - 45104236
Alignment:
Q  20 agagtataagtaataataataagaggagtttagaaccaaaagcaaaagctagtaaccaaactggaaagaagagtagaagtggttctcagtgtttggatca 119  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45104042 agagtagaagtaataataataagaggagtttggaaccaaaagcaaaagctagtaaccaaactggaaagaagagtagaagtggttctcagtgtttggatca 45104141  T
Q  120 cattatggctgagagaaaaagaagattggagctatcacaaaagttcattgcactttcagctactattcctggcttgaagaaggtaatagttaaat 214  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45104142 cattatggctgagagaaaaagaagattggaactatcacaaaagttcattgcactttcagctactattcctggcttgaagaaggtaatagttaaat 45104236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 45130668 - 45130855
Alignment:
Q  20 agagtataagtaataataataagaggagtttagaaccaaaagcaaaagctagtaaccaaactggaaagaagagtagaagtggttctcagtgtttggatca 119  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  45130668 agagtagaagtaataataataagaggagtttggaaccaaaagcaaaagctagtaaccaaactggaaagaagagtagaagtggttctcagtatctggatca 45130767  T
Q  120 cattatggctgagagaaaaagaagattggagctatcacaaaagttcattgcactttcagctactattcctggcttgaagaaggtaata 207  Q
    ||||||||||||||||||||| ||| | ||  ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  45130768 cattatggctgagagaaaaaggagactagaattatcacagaagttcattgcactttcagctactattcctggcttaaagaaggtaata 45130855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 8710894 - 8710817
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  8710894 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctgacaattt 8710817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 28226171 - 28226101
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  28226171 tggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcct 28226101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 15604339 - 15604408
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  15604339 ggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcct 15604408  T

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Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 216 - 292
Target Start/End: Original strand, 11830365 - 11830441
Alignment:
Q  216 gcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||  |||||| ||||||||| |||||||    
T  11830365 gcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaattgctaatcctaacaattt 11830441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 8342602 - 8342528
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||  |||||||  ||||||| |||||||    
T  8342602 ttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcaataatcctgacaattt 8342528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 41588483 - 41588418
Alignment:
Q  216 gcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    ||||||| |||||||||||| || |||||||||||||||||||||||||||  |||||||||||||    
T  41588483 gcttaataatgtgtttcgtccttacaattaggcgtcatttaaaaattagtccctgtaatcgctaat 41588418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 6573050 - 6573114
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatc 282  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| |||  ||||||||||||||    
T  6573050 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaatttgtccatgtaatcgctaatc 6573114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 8342190 - 8342256
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||  |||||| | |||||||    
T  8342190 ttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtctatgtaattggtaatcct 8342256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 15604762 - 15604696
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| ||| ||||||||||| |||||||||||| |||||  ||||||||||||||||    
T  15604762 ttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaactagtccctgtaatcgctaatcct 15604696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 6573543 - 6573612
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| ||  | ||||||||||||||||||||||| |||  ||||||||||||||||    
T  6573543 ggcttaatgatgtgtttcatccctccaattaggcgtcatttaaaaattcgtccatgtaatcgctaatcct 6573612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 25892391 - 25892463
Alignment:
Q  212 aatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| ||  || |||||||| ||||||||||||| |||  ||||||||||||||||    
T  25892391 aatggcttaatgatgtgtttcatctatgaaattaggcttcatttaaaaatttgtccatgtaatcgctaatcct 25892463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 14900496 - 14900565
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| || ||| |||||||||||||||||| ||||||| |||  |||||| |||||||||    
T  14900496 ggcttaatgatgtgattagtccttgcaattaggcgtcattcaaaaattcgtccctgtaattgctaatcct 14900565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 41587235 - 41587303
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| ||||||||| | |||||||||||||| |||  |||||||| |||||||    
T  41587235 ggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattggtc-ctgtaatcgttaatcct 41587303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 14900888 - 14900809
Alignment:
Q  205 atagttaaatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| || |||||||||||||| || ||| ||||||||||| ||| |||||||||| |||  |||||| |||||||||    
T  14900888 atagtttaaaggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcct 14900809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 33739697 - 33739772
Alignment:
Q  209 ttaaatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||| |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  33739697 ttaaaaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 33739772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 1695740 - 1695809
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  1695740 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 1695809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 13995673 - 13995742
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  13995673 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 13995742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 13996070 - 13996001
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  13996070 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 13996001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 33062050 - 33062119
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  33062050 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 33062119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 33062447 - 33062378
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  33062447 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 33062378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 28228679 - 28228737
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatc 282  Q
    ||||||||||||  |||||||||| |||||||||||||| |||  |||||||| |||||    
T  28228679 atgtgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatc 28228737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 33740100 - 33740031
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | || |||||||||| |||||||||||| |||  |||||| |||||||||    
T  33740100 ggcttattgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 33740031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 41248956 - 41248887
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| ||||||||||   | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  41248956 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 41248887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 15848097 - 15848157
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||| |||| || ||||||||||| ||| |||||||||| |||  ||||||||||||||||    
T  15848097 atgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 15848157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 10600372 - 10600298
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  10600372 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaattt 10600298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 32934774 - 32934697
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  32934774 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaattt 32934697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 214 - 292
Target Start/End: Original strand, 42617910 - 42617988
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||  | |||||||||||||| |||||||    
T  42617910 tggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctgacaattt 42617988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 25453128 - 25453205
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  | |||||||||||||| |||||||    
T  25453128 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaattt 25453205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 43266266 - 43266343
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| ||||||| |||||||    
T  43266266 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctgacaattt 43266343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 43266692 - 43266615
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||| || |||||||    
T  43266692 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaattctgacaattt 43266615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 46204424 - 46204498
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||| ||| |||||||    
T  46204424 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaaacctgacaattt 46204498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 27138367 - 27138290
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||||| || |||| ||||||||||||||||||||||  |||||||||||||||| |||||||    
T  27138367 ggcttaatgatgtgtttcgtcctttcaatcaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaattt 27138290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 284
Target Start/End: Complemental strand, 32068526 - 32068453
Alignment:
Q  211 aaatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||  ||||||||||||||||    
T  32068526 aaatggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattaatccctgtaatcgctaatcct 32068453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 33828400 - 33828323
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||||| |||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||| |||||||    
T  33828400 ggcttaatgatgagtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaatcctgacaattt 33828323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 25628902 - 25628827
Alignment:
Q  217 cttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||||||||||  |||||||||||||||| |||||||    
T  25628902 cttaatgatgtgtctcgtccttgcaattatgcgtcatttaaaaattagtctatgtaatcgctaatcctgacaattt 25628827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 284
Target Start/End: Original strand, 10600021 - 10600095
Alignment:
Q  210 taaatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||  | |||||| |||||||    
T  10600021 taaatggctaaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgttaatcct 10600095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 25628481 - 25628547
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||| |||||||    
T  25628481 ttaatgatgtgtttcgtgcttgcaattaggcgtcatttaaaaattagtcattgtaatcgataatcct 25628547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 28890582 - 28890648
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||  ||||||||||||||||    
T  28890582 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcct 28890648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 32068099 - 32068165
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||  ||||||||||||||||    
T  32068099 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcct 32068165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 32934351 - 32934425
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||  |||||||||||||||| |||||||    
T  32934351 ttaatgatgtgtttcatccttgcaattaggtgtcatttaaaaattagtcgctgtaatcgctaatcctgacaattt 32934425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 42618334 - 42618268
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||    
T  42618334 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcct 42618268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 22081986 - 22081916
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||| ||||||||| ||||||||| |||||||||||||||||||   ||||||||||||||||    
T  22081986 tggcttaatgatttgtttcgtccttgcaattatgcgtcatttaaaaattagtttctgtaatcgctaatcct 22081916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 23058855 - 23058786
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||| ||  |||||||| |||||||    
T  23058855 ggcttaatgatgtgtttcgtccttgcaattcggcgtcatttaaaaattaatccttgtaatcgttaatcct 23058786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 22081559 - 22081611
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtc 266  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  22081559 tggcttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaattagtc 22081611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 23058427 - 23058498
Alignment:
Q  213 atggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||||||||||||  ||||||  ||||||||    
T  23058427 atggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattagtccctgtaattactaatcct 23058498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 25453551 - 25453485
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| ||| ||||| ||||||||||||||||||||  || |||||||||||||    
T  25453551 ttaatgatgtgtttcgtctttgtaattaagcgtcatttaaaaattagtccctgaaatcgctaatcct 25453485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 39274873 - 39274939
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| ||| |||||||| ||||| |||||||||||||||  ||||||||||||||||    
T  39274873 ttaatgatgtgttttgtccttgcaatttggcgttatttaaaaattagtctctgtaatcgctaatcct 39274939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 32680595 - 32680672
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||| ||   |||||| ||||||||| |||||||    
T  32680595 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgttcctgtaattgctaatcctgacaattt 32680672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 18087757 - 18087697
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||| ||| ||||||||||| |||||||||||||| |||| ||||||||||||||||    
T  18087757 atgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcgctaatcct 18087697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 32680992 - 32680923
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| || ||| ||||||||||||||| |||||||||| |||  |||||| |||||||||    
T  32680992 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccatgtaattgctaatcct 32680923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 30948557 - 30948488
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  30948557 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 30948488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 32688637 - 32688572
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaa 289  Q
    |||||||||| | ||||||||||| ||||||||||| || |||  |||||||||||||||| ||||    
T  32688637 atgtgtttcgcccttgcaattaggggtcatttaaaatttggtccttgtaatcgctaatcctgacaa 32688572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 34928650 - 34928719
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  34928650 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 34928719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 34929047 - 34928978
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  34929047 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 34928978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 39686931 - 39686862
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  39686931 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 39686862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 291
Target Start/End: Complemental strand, 27397023 - 27396947
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaatt 291  Q
    |||||||  |||| |||| || ||||||||||| ||| |||||||||| |||  |||||||||||||||| ||||||    
T  27397023 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatt 27396947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 13044681 - 13044749
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||| ||||| ||||||||||||| ||||||||| || |||   |||||||||| |||| |||||||    
T  13044681 atgtgtctcgtccttgcaattaggcgccatttaaaatttcgtcccagtaatcgctactcctgacaattt 13044749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 13050200 - 13050140
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||| |||||||||||||| |||| ||| || |||  |||||||| |||||||    
T  13050200 atgtgtttcgtccttgcaattaggcgtaattttaaatttcgtccctgtaatcgttaatcct 13050140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 37656861 - 37656929
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||| |||| || |||||||||||  || |||||||||| |||  ||||||||||||||||| ||||||    
T  37656861 atgtatttcatccttgcaattaggaatcgtttaaaaattggtctctgtaatcgctaatcctcgcaattt 37656929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 9e-27; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 54858560 - 54858637
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  54858560 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaattt 54858637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 3032582 - 3032651
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  3032582 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcct 3032651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 213 - 292
Target Start/End: Original strand, 10407887 - 10407966
Alignment:
Q  213 atggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||  |||||||||||||||| |||||||    
T  10407887 atggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattactccctgtaatcgctaatcctgacaattt 10407966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 45463075 - 45463142
Alignment:
Q  217 cttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  45463075 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcct 45463142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 10408316 - 10408246
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  10408316 tggcttaatgttgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcct 10408246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 27069336 - 27069267
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| |||||||||    
T  27069336 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcct 27069267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 52573228 - 52573297
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||    
T  52573228 ggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtacctgtaatcgctaatcct 52573297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 52573654 - 52573585
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  52573654 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcct 52573585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 54858986 - 54858917
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| |||||||    
T  54858986 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcct 54858917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 215 - 290
Target Start/End: Complemental strand, 22987277 - 22987202
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaat 290  Q
    ||||||||||||||||||||| || ||||||| |||||||||||||||||||  |||||||||||||||| |||||    
T  22987277 ggcttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaat 22987202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 11523952 - 11524018
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| |||||||    
T  11523952 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgttaatcct 11524018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 39701332 - 39701258
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| ||||| | |||||||    
T  39701332 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctatgtaatcgttaatcttgacaattt 39701258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 27068910 - 27068979
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  27068910 ggcttaaggatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcct 27068979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 51859832 - 51859763
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||||||||||  ||||||||||||||||    
T  51859832 ggcttaatgatgtgtttcgtccttgcaattagacgtaatttaaaaattagtctttgtaatcgctaatcct 51859763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 22717942 - 22718014
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaat 290  Q
    |||||||||||||||||| || ||||||| |||||||||||||||||||  |||||||||||||||| |||||    
T  22717942 ttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaat 22718014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 45463502 - 45463430
Alignment:
Q  212 aatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||| |||||||||    
T  45463502 aatggtttaatgatatgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcct 45463430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 50504251 - 50504183
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcc 283  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||  |||||||| ||||||    
T  50504251 ggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcgttaatcc 50504183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 39666772 - 39666839
Alignment:
Q  217 cttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||| ||| ||||||  ||||||||||||||||||| ||||||||||||||||    
T  39666772 cttaatgatgtgtttcgtctttgtaattagaagtcatttaaaaattagtcaatgtaatcgctaatcct 39666839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 5818198 - 5818132
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||  |||||||| |||||||    
T  5818198 ttaatgatgtgtttcgtctttgtaattaggcgtcatttaaaaattagtccctgtaatcgttaatcct 5818132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 16605602 - 16605663
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcg 276  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||    
T  16605602 ggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcg 16605663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 27149421 - 27149353
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||  |||||| |||||||||    
T  27149421 ggcttaatgatgtgtttcgtccttgcaattaggcgtcattt-aaaattagtccctgtaattgctaatcct 27149353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 27891584 - 27891650
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    ||||||||||||||||||||| |||||||||| | | |||||||||||||||  |||||||||||||    
T  27891584 ggcttaatgatgtgtttcgtccttgcaattagacattatttaaaaattagtccctgtaatcgctaat 27891650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 22567183 - 22567114
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||| |||  |||||| |||||||||    
T  22567183 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcct 22567114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 50503825 - 50503892
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatc 282  Q
    ||||||||||||||||||||| | |||||||||| |||||||||||| ||||  |||||||| |||||    
T  50503825 ggcttaatgatgtgtttcgtcctcgcaattaggcatcatttaaaaatcagtccatgtaatcgttaatc 50503892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 292
Target Start/End: Complemental strand, 4983124 - 4983046
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||| || ||| ||||||||||||||| ||||||||||  ||  |||||| |||||||||| ||||||    
T  4983124 tggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcatccttgtaattgctaatcctcgcaattt 4983046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 9400519 - 9400588
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| || ||| ||||||||||| |||||||||||||| |||  |||||| |||||||||    
T  9400519 ggcttaatgatgtgattagtccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcct 9400588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 39700912 - 39700984
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaat 290  Q
    |||||| |||||||| |  |||||||||||||| |||||||||||| ||  |||||||||||||||| |||||    
T  39700912 ttaatggtgtgtttcattcttgcaattaggcgttatttaaaaattaatccatgtaatcgctaatcctgacaat 39700984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 22923149 - 22923215
Alignment:
Q  226 gtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||| ||  |||||| |||||||||||||||||||  |||||||| ||||||| |||||||    
T  22923149 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaattt 22923215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 22927802 - 22927868
Alignment:
Q  226 gtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||| ||  |||||| |||||||||||||||||||  |||||||| ||||||| |||||||    
T  22927802 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaattt 22927868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 22984081 - 22984147
Alignment:
Q  226 gtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||| ||  |||||| |||||||||||||||||||  |||||||| ||||||| |||||||    
T  22984081 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaattt 22984147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 22997669 - 22997735
Alignment:
Q  226 gtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||| ||  |||||| |||||||||||||||||||  |||||||| ||||||| |||||||    
T  22997669 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaattt 22997735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 39667199 - 39667133
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| ||| ||||| | |||||||||||||| |||  |||||||| |||||||    
T  39667199 ttaatgatgtgtttcgtccttgtaattacgggtcatttaaaaattggtccctgtaatcgttaatcct 39667133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 50751925 - 50751852
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaa 289  Q
    ||||||||||||||||||  |  |||||||||||||| |||||||||| |||  |||||||||||||||| ||||    
T  50751925 ggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtc-ctgtaatcgctaatcctgacaa 50751852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 14801736 - 14801813
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||  |||| |||| || ||||||||||| ||| |||||||||| |||  |||||||||||||||| |||||||    
T  14801736 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaattt 14801813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 27934532 - 27934601
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| || ||| ||||||||||| ||| |||||||||| |||  |||||| |||||||||    
T  27934532 ggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcct 27934601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 27934907 - 27934846
Alignment:
Q  223 gatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| || ||| |||||||||||||||||||||||||| |||  |||||| |||||||||    
T  27934907 gatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcct 27934846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 34837074 - 34837143
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  34837074 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 34837143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 34837471 - 34837402
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  34837471 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcct 34837402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 38012567 - 38012498
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  38012567 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 38012498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 42738428 - 42738359
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  42738428 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 42738359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 51203609 - 51203678
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  51203609 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 51203678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 282
Target Start/End: Original strand, 4982725 - 4982793
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatc 282  Q
    ||||||||||||||| || ||| |||||||||| ||| ||||||||||| |||  |||||| |||||||    
T  4982725 tggcttaatgatgtgattagtccttgcaattagacgtaatttaaaaattcgtccatgtaattgctaatc 4982793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 38012167 - 38012239
Alignment:
Q  212 aatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||| |||||||||  | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  38012167 aatggcttattgatgtgttcagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 38012239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 52909262 - 52909330
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||| |||| || ||||||||||| ||| || ||||||| |||| |||||||||||||||| |||||||    
T  52909262 atgtatttcatctttgcaattaggggtcgttcaaaaattggtcactgtaatcgctaatcctgacaattt 52909330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 284
Target Start/End: Complemental strand, 9400914 - 9400847
Alignment:
Q  217 cttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||| || ||| ||||||||||| ||| |||||||||| |||  |||||| |||||||||    
T  9400914 cttaatgatgtgattagtccttgcaattaggggtcgtttaaaaattcgtccctgtaattgctaatcct 9400847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 9144773 - 9144835
Alignment:
Q  222 tgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  9144773 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 9144835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 50750910 - 50750956
Alignment:
Q  238 tgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| |||||||||| |||  ||||||||||||||||    
T  50750910 tgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcct 50750956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 1841357 - 1841244
Alignment:
Q  92 gtagaagtggttctcagtgtttggatcacattatggctgagagaaaaagaagattggagctatcacaaaagttcattgcactttcagctactattcctgg 191  Q
    |||||||  |||| |||||| | ||||| || ||||| ||||||||| |||||  |||| | ||  | || ||||||||||||||||| |||||||| ||    
T  1841357 gtagaagcagttcacagtgtattgatcatataatggcagagagaaaacgaagacaggagttgtctgagaaattcattgcactttcagccactattcccgg 1841258  T
Q  192 cttgaagaaggtaa 205  Q
    |||||  |||||||    
T  1841257 cttgagcaaggtaa 1841244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 9145163 - 9145094
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||  |||  |||||| |||||||||    
T  9145163 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatgcgtccctgtaattgctaatcct 9145094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 32950142 - 32950211
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||   ||||| |||||||||    
T  32950142 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtcccagtaattgctaatcct 32950211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 32950539 - 32950470
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||| | |||||||||||| |||  |||||| |||||||||    
T  32950539 ggcttattgatgtgtttagcccttgcaattaggtggcatttaaaaattcgtccctgtaattgctaatcct 32950470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 42738031 - 42738100
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| | |||||||    
T  42738031 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcct 42738100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 6237223 - 6237179
Alignment:
Q  240 caattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||||| ||||||  |||||| |||||||||    
T  6237223 caattaggcgtcatttaaaatttagtctctgtaattgctaatcct 6237179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 15508091 - 15508024
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||| |||| || ||||||||||| ||| |||||||||| |||  |||||||||||||||| |||||||    
T  15508091 atgtatttcatccttgcaattaggggtcgtttaaaaatt-gtccttgtaatcgctaatcctgacaattt 15508024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 30642565 - 30642505
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||  |||||||| | ||||||||||||||  ||| |||||||| |||||||    
T  30642565 atgtgtttcgtccctgcaattatgggtcatttaaaaattcatcattgtaatcgttaatcct 30642505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 44664932 - 44664857
Alignment:
Q  217 cttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  44664932 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctgacaattt 44664857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 35634525 - 35634448
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||  |||||||||||||||| |||||||    
T  35634525 ggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgctaatcctgacaattt 35634448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 8997859 - 8997933
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  || ||||||||||||| |||||||    
T  8997859 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgcaatcgctaatcctgacaattt 8997933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 15229930 - 15230000
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  15229930 tggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcct 15230000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 7983428 - 7983497
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  7983428 ggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcct 7983497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 284
Target Start/End: Original strand, 44664504 - 44664577
Alignment:
Q  211 aaatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||  |||||||| |||||||    
T  44664504 aaatggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcct 44664577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 8998113 - 8998038
Alignment:
Q  217 cttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||| | |||||||    
T  8998113 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcatgacaattt 8998038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 10445758 - 10445692
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  10445758 ttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcct 10445692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 37542227 - 37542293
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  | ||||||||||||||    
T  37542227 ttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcct 37542293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 42945537 - 42945463
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||   |||||||||||||||| |||||||    
T  42945537 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctgacaattt 42945463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 15230357 - 15230280
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||||||||||||  |||||||||||||| | |||||||    
T  15230357 ggcttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcttgacaattt 15230280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 41353999 - 41353922
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||||||||||  ||||||| |||||||| |||||||    
T  41353999 ggcttaatgatgtgtttcgtccttataattaggcgtcatttaaaaattagtccctgtaatcactaatcctgacaattt 41353922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 6471693 - 6471759
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||  | ||||||||||||||    
T  6471693 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatgagtctctataatcgctaatcct 6471759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 25124566 - 25124632
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  25124566 ttaatgatgtatttcgttcttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcct 25124632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 25124989 - 25124923
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||    
T  25124989 ggcttaatcatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaat 25124923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 38003829 - 38003763
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||||  ||||||||||||||||    
T  38003829 ttaatgatgtgtttcgtccttgcaattagtcgtaatttaaaaattagtctctgtaatcgctaatcct 38003763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 41353577 - 41353651
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||||   |||||||||||||||| |||||||    
T  41353577 ttaatgatatgtttcgtccttacaattaggcgtcatttaaaaattagtttctgtaatcgctaatcctaacaattt 41353651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 234166 - 234097
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||| | |||||||    
T  234166 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcct 234097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 710577 - 710508
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||| | |||||||    
T  710577 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcct 710508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 747789 - 747720
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||| | |||||||    
T  747789 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcct 747720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 871684 - 871615
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||| | |||||||    
T  871684 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcct 871615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 6472443 - 6472395
Alignment:
Q  213 atggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaat 261  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6472443 atggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaat 6472395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 281
Target Start/End: Original strand, 21432689 - 21432759
Alignment:
Q  211 aaatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    ||||| ||||||||||||||||||| |||||||||| |||||| ||||||||||||  ||||||| |||||    
T  21432689 aaatgtcttaatgatgtgtttcgtccttgcaattagacgtcatataaaaattagtctctgtaatcactaat 21432759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 11675091 - 11675022
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||| |||  |||||| |||||||||    
T  11675091 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcct 11675022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 23505052 - 23505119
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatc 282  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||| |||  |||||| |||||||    
T  23505052 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccatgtaattgctaatc 23505119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 23507853 - 23507784
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||  |||  |||||| |||||||||    
T  23507853 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaatacgtccctgtaattgctaatcct 23507784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 27500092 - 27500155
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    |||||||| ||||||||| |||||||||  |||||||||||||||||||  || ||||||||||    
T  27500092 ttaatgatatgtttcgtccttgcaattaaacgtcatttaaaaattagtccatgcaatcgctaat 27500155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 36325628 - 36325562
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||| || ||| |||||||||||||||||||||||||| |||  |||||| | |||||||    
T  36325628 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtctctgtaattgttaatcct 36325562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 2266492 - 2266561
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  2266492 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcct 2266561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 2266889 - 2266820
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  2266889 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 2266820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 4995084 - 4995008
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||  |||| |||| || ||||||||||| |||||||||||||| |||  |||||||||||||||| |||||||    
T  4995084 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtc-ctgtaatcgctaatcctgacaattt 4995008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 11674695 - 11674764
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| || ||| ||||||||||||||| |||||||||| |||  |||||| | |||||||    
T  11674695 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcct 11674764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 38845696 - 38845627
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  38845696 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 38845627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 39071676 - 39071753
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||  |||| |||| || ||||||||||| ||| |||||||||| |||  |||||||||||||||| |||||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaattt 39071753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 10749927 - 10749867
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||| |||||||||||  ||||||||||||| |||  |||||||| |||||||    
T  10749927 atgtgtttcgtccttgcaattagggatcatttaaaaattggtccatgtaatcgttaatcct 10749867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 40776048 - 40775978
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||| ||||||||||   | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  40776048 tggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 40775978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 44406864 - 44406926
Alignment:
Q  222 tgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  44406864 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 44406926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 44407255 - 44407185
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||| |||||||||| | | ||||||||||||| ||||||||||||  ||  |||||| |||||||||    
T  44407255 tggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcct 44407185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 11763095 - 11763030
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaa 289  Q
    ||||||||||||  |||||||| |  ||||||||||||| |||  |||||||||||||||| ||||    
T  11763095 atgtgtttcgtccctgcaattaaggatcatttaaaaattggtccttgtaatcgctaatcctgacaa 11763030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 27500492 - 27500435
Alignment:
Q  227 tgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||| ||||||||| | |||||||||||||| |||  |||||||| |||||||    
T  27500492 tgtttcgtccttgcaattatgggtcatttaaaaattggtccatgtaatcgttaatcct 27500435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 40318392 - 40318323
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||  |||| |||| || ||||||||||| ||  ||||||||||||||  ||||||||||||||||    
T  40318392 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcct 40318323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 2535969 - 2535909
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||| |||||||  |||||||||| |||||||||||||| |||  |||||||| |||||||    
T  2535969 atgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcct 2535909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 282
Target Start/End: Original strand, 8746323 - 8746391
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatc 282  Q
    ||||||||  ||||||||| ||  |||||||||| |||||||||||||  |||| |||||||| |||||    
T  8746323 tggcttaagtatgtgtttcctccctgcaattaggggtcatttaaaaatcggtcactgtaatcgttaatc 8746391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 37542648 - 37542604
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaatt 262  Q
    ||||| ||||||||| || || |||||||||||||||||||||||    
T  37542648 ttaataatgtgtttcatccttacaattaggcgtcatttaaaaatt 37542604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 6517497 - 6517572
Alignment:
Q  209 ttaaatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  6517497 ttaattggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcct 6517572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 22502777 - 22502851
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  22502777 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaattt 22502851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 7160807 - 7160873
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  7160807 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcct 7160873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 31407301 - 31407227
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  31407301 ttaatgatgtgcttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaattt 31407227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 21836456 - 21836379
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||   |||||||||||||||| |||||||    
T  21836456 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagttcttgtaatcgctaatcctgacaattt 21836379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 22503200 - 22503131
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  22503200 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcct 22503131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 7905244 - 7905312
Alignment:
Q  216 gcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| |||||||    
T  7905244 gcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgttaatcct 7905312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 31406877 - 31406947
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||  |||||||| |||||||    
T  31406877 tggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcct 31406947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 32593490 - 32593567
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||| ||| || |||||||||||||||||||||||||||  | |||||||||||||| |||||||    
T  32593490 ggcttaatgatgtgtttagtcctttcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaattt 32593567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 15913551 - 15913614
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||  |||||| ||||||    
T  15913551 ttaatgatgtgtttcgttattgcaattaggcgtcatttaaaaattagtctttgtaattgctaat 15913614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 21836030 - 21836100
Alignment:
Q  213 atggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  21836030 atggtttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagtc-ttgtaatcgctaatcct 21836100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 7161230 - 7161153
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||||||||||  | ||||| |||||||| |||||||    
T  7161230 ggcttaatgatatatttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcactaatcctgacaattt 7161153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 10781147 - 10781198
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtc 266  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  10781147 ggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtc 10781198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 12065223 - 12065285
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    ||||||||| ||||| || |||||||||||| |||||||||||||||||| |||||||||||||    
T  12065223 ttaatgatgcgtttcatctttgcaattaggcatcatttaaaaattagtca-tgtaatcgctaat 12065285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 14196615 - 14196681
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||| |||  |||||| ||||||    
T  14196615 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaat 14196681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 284
Target Start/End: Complemental strand, 14197011 - 14196943
Alignment:
Q  216 gcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||| || ||| ||||||||||||||| |||||||||| |||  |||||| |||||||||    
T  14197011 gcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgctaatcct 14196943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 281
Target Start/End: Complemental strand, 7905666 - 7905603
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    |||||||||||||||||| ||||||||||| |||||||| ||||| |||  | |||||||||||    
T  7905666 ttaatgatgtgtttcgtccttgcaattaggtgtcatttataaatttgtccctataatcgctaat 7905603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 15913974 - 15913927
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaatt 262  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  15913974 ggcttaatgatgtgtttcgtccttgcaattaagggtcatttaaaaatt 15913927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 363228 - 363158
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  363228 tggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 363158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 25485956 - 25486022
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||| || ||| ||||||||| |||||||||||||||| |||  |||||| |||||||||    
T  25485956 ttaatgatgtgattagtccttgcaattaagcgtcatttaaaaattcgtccctgtaattgctaatcct 25486022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 28498444 - 28498384
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||  ||||||||||  ||||||||||||| |||  ||||||||||||||||    
T  28498444 atgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcgctaatcct 28498384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 30337849 - 30337777
Alignment:
Q  212 aatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||  |||| |||  || ||||||||||| |||||||||||||| |||  ||||||||||||||||    
T  30337849 aatggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcct 30337777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 362864 - 362939
Alignment:
Q  209 ttaaatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||| |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| | |||||||    
T  362864 ttaaaaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcct 362939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 21628141 - 21628064
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||  |||| |||| || ||||||||||| |||  ||||||||| |||  |||||||||||||||| |||||||    
T  21628141 ggcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcctgacaattt 21628064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 22373085 - 22373016
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||| ||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  22373085 ggcttattgatgttttttgcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 22373016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 15116651 - 15116591
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||| ||||||| ||||||||||| ||| |||||||||| |||   |||||||||||||||    
T  15116651 atgtatttcgtccttgcaattaggggtcgtttaaaaattggtcctcgtaatcgctaatcct 15116591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 17188952 - 17189023
Alignment:
Q  213 atggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  17188952 atggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcct 17189023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 8898517 - 8898583
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  8898517 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaat 8898583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 37929418 - 37929495
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||||||||| |||||||    
T  37929418 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgttatcgctaatcctgacaattt 37929495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 40714869 - 40714800
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  40714869 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcct 40714800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 45750268 - 45750199
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  45750268 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcct 45750199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 30326496 - 30326562
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  30326496 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaat 30326562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 49955346 - 49955416
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  49955346 tggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcct 49955416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 17189277 - 17189208
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||  ||||||||||||||||    
T  17189277 ggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcct 17189208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 20760931 - 20760862
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||  ||||||||||||||||    
T  20760931 ggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcgctaatcct 20760862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 31050950 - 31051019
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||  ||||||||||||||||    
T  31050950 ggcttaatgatgtgtttcgtccttgcaattaggcgttatttaaaaattagtctctgtaatcgctaatcct 31051019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 40714444 - 40714513
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| |||||||    
T  40714444 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcct 40714513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 45749842 - 45749919
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||  |||||||| ||||||| |||||||    
T  45749842 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctgacaattt 45749919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 49955773 - 49955704
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| |||||||    
T  49955773 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcct 49955704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 25885419 - 25885356
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgct 278  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  25885419 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgct 25885356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 35041037 - 35040963
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||||||  |||||||||||||||| |||||||    
T  35041037 ttaatgatgtgtttcgtccttgtaattagccgtcatttaaaaattagtccatgtaatcgctaatcctgacaattt 35040963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 8898943 - 8898866
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||  ||||||| ||||| || |||||||    
T  8898943 ggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcactaatactgacaattt 8898866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 31058483 - 31058416
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatc 282  Q
    ||||||||||||||||||||| |||||||||| | |||||||||||||||||| |||||||| |||||    
T  31058483 ggcttaatgatgtgtttcgtccttgcaattagacatcatttaaaaattagtcaatgtaatcgataatc 31058416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 7371595 - 7371529
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||||||||||  |||||||||||||    
T  7371595 ggcttaacgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtctctgtaatcgctaat 7371529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 28325229 - 28325164
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||| ||||    
T  28325229 ggcttaatgatgtgtttcggccttgcaattaggcgtcatttaaaaattagtca-tgtaatcgttaat 28325164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 12906085 - 12906016
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| |||||||| | | |||||||||||||||||  ||||||||||||||||    
T  12906085 ggcttaatgatgtgtttcgtccttgcaatttgacatcatttaaaaattagtccatgtaatcgctaatcct 12906016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 24905167 - 24905236
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||| |||  |||||| |||||||||    
T  24905167 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcct 24905236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 28011765 - 28011696
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||| |||  |||||| |||||||||    
T  28011765 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcct 28011696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 28324805 - 28324881
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||||||||||| || ||||||||||||||| ||| |||||||||   |||||||||||||||| |||||||    
T  28324805 ggcttaatgatgtgtttcctccttgcaattaggcgtcgttt-aaaattagttcatgtaatcgctaatcctgacaattt 28324881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 25884701 - 25884745
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaa 259  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  25884701 ggcttaatgatgtgtttcgtcattgcaattagacgtcatttaaaa 25884745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 44523562 - 44523516
Alignment:
Q  217 cttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaatta 263  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  44523562 cttaatgatgtgtttcgtccttgcaattaggcctcatttaaaaatta 44523516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 32558533 - 32558464
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||| ||| || ||||||| ||||||||||||||||||   | ||||||||||||||    
T  32558533 ggcttaatgatgtgttttgtccttacaattagacgtcatttaaaaattagttcctataatcgctaatcct 32558464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 278
Target Start/End: Original strand, 7371293 - 7371353
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgct 278  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||||   ||||||||||    
T  7371293 ttaatgatatgtttcgtccttgcaattaggtgtcatttaaaaattagtttctgtaatcgct 7371353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 33442591 - 33442663
Alignment:
Q  212 aatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  33442591 aatggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcct 33442663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 5734010 - 5734078
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||  |||| ||||||| ||||||||||| ||| |||||||||| |||| ||||||||||||||||    
T  5734010 ggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtca-tgtaatcgctaatcct 5734078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 7820954 - 7821031
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||  |||| |||| || ||||||||||| ||| ||||| ||||||||  |||||||||||||||| |||||||    
T  7820954 ggcttaaatatgtatttcatccttgcaattaggggtcctttaataattagtccctgtaatcgctaatccttacaattt 7821031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 33442994 - 33442922
Alignment:
Q  212 aatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||| |||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  33442994 aatgacttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 33442922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 292
Target Start/End: Original strand, 40772504 - 40772584
Alignment:
Q  212 aatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||  |||| |||| || ||||||||| | ||| |||||||||| |||  |||||||||||||||| |||||||    
T  40772504 aatggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtccctgtaatcgctaatcctgacaattt 40772584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 46163039 - 46163107
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||| |||| |||||| ||||||| ||| |||||||||| |||  |||||||||||||||| |||||||    
T  46163039 atgtatttcatcattgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcctgacaattt 46163107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 41098755 - 41098810
Alignment:
Q  237 ttgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||| ||| |||||||||| |||  |||||||||||||||| |||||||    
T  41098755 ttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgacaattt 41098810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 6367561 - 6367631
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||  |||| |||| || ||||||||||| ||| |||||||||| |||  ||||||||||||||||    
T  6367561 tggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 6367631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 35038458 - 35038524
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||| |||||||||||| ||||||||| | ||||||||||||||  ||  |||||||| |||||||    
T  35038458 ttaataatgtgtttcgtccttgcaattaagggtcatttaaaaattgatccatgtaatcgttaatcct 35038524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 23209755 - 23209686
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||  |||| |||| || ||||||||||| ||| |||||||||| |||  ||||||||||||||||    
T  23209755 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcct 23209686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 36694676 - 36694599
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||  |||| |||| || ||||||||||| ||  |||||||||| |||  |||||||||||||||| |||||||    
T  36694676 ggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaattt 36694599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 36710777 - 36710700
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||  |||| |||| || ||||||||||| ||  |||||||||| |||  |||||||||||||||| |||||||    
T  36710777 ggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaattt 36710700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 52134068 - 52134137
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | |||||||||||||  ||||||||||| |||  |||||| |||||||||    
T  52134068 ggcttattgatgtgtttagcccttgcaattaggcggtatttaaaaattcgtccctgtaattgctaatcct 52134137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 52134465 - 52134396
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| | |||||||    
T  52134465 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcct 52134396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 13300323 - 13300263
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||| |||| |||||||||||||||||| |||||||||| |||  |||| || ||||||||    
T  13300323 atgtatttcatcattgcaattaggcgtcgtttaaaaattggtctctgtattcactaatcct 13300263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 282
Target Start/End: Original strand, 34464448 - 34464516
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatc 282  Q
    ||||||||  |||| |||| || ||||||||||| ||| |||||||||| |||  ||||||||||||||    
T  34464448 tggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatc 34464516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 35152749 - 35152689
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||| |||| || ||||||||||| ||| ||||||||||||||  |||| |||||||||||    
T  35152749 atgtatttcatccttgcaattaggggtcgtttaaaaattagtctctgtattcgctaatcct 35152689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 3596112 - 3596186
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  3596112 ttaatgatgtgtttcgtccttgcaattaggcgtgatttaaaaattagtcaatgtaatcgctaatcctgacaattt 3596186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 32306847 - 32306781
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32306847 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgctaatcct 32306781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 211 - 292
Target Start/End: Original strand, 10294563 - 10294644
Alignment:
Q  211 aaatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| ||||||| | |||||||    
T  10294563 aaatggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcatgacaattt 10294644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 29118960 - 29118895
Alignment:
Q  219 taatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29118960 taatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaatcct 29118895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 40788846 - 40788777
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  40788846 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcct 40788777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 217 - 292
Target Start/End: Original strand, 29685943 - 29686018
Alignment:
Q  217 cttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  29685943 cttaatgatgtatttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaattt 29686018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 210 - 284
Target Start/End: Complemental strand, 37778704 - 37778630
Alignment:
Q  210 taaatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| |||||||||    
T  37778704 taaaaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcct 37778630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 3469200 - 3469269
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  3469200 ggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcct 3469269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 32306424 - 32306501
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||| | |||||||    
T  32306424 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcttgacaattt 32306501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 52032565 - 52032496
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||  ||||||||||||||||    
T  52032565 ggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcct 52032496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 33156419 - 33156355
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatc 282  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||    
T  33156419 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcattgtaatcgttaatc 33156355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 13948780 - 13948847
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatc 282  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||    
T  13948780 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatc 13948847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 284
Target Start/End: Complemental strand, 29686364 - 29686297
Alignment:
Q  217 cttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  29686364 cttaatgatgtgtttcgtccttgcaattaggcgtcattttaaaattagtcattgtaatcactaatcct 29686297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 3469626 - 3469557
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||    
T  3469626 ggcttaatgatctgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcct 3469557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 33506376 - 33506307
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||  ||||||||||||||||    
T  33506376 ggcttaatgatgtgtttcgtcctttcaattaggcgttatttaaaaattagtccctgtaatcgctaatcct 33506307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 281
Target Start/End: Original strand, 29118529 - 29118593
Alignment:
Q  217 cttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||  |||||||||||||    
T  29118529 cttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaattagtccctgtaatcgctaat 29118593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 11910701 - 11910768
Alignment:
Q  217 cttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| ||  ||||||||||||||||    
T  11910701 cttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcct 11910768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 13949122 - 13949071
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagt 265  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13949122 tggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagt 13949071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 42855734 - 42855664
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||||||||  |||| |||||||||||    
T  42855734 tggcttaatgatgtgtttagcccttgcaattaggcgtcatttaaaaattagtccatgtattcgctaatcct 42855664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 47551493 - 47551559
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||||  |||||||||||||    
T  47551493 ggcttaatgatgtgtttcgtccttgcaattagatgtcatttaaaaattagtccctgtaatcgctaat 47551559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 52032141 - 52032207
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  52032141 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattaatccttgtaatcgctaatcct 52032207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 10294985 - 10294908
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||||| ||||||| || ||| ||||||||||||||   ||||||||||||||||| ||||||    
T  10294985 ggcttaatgatgtgtttcgtccttgcaatcagacgtaatttaaaaattagttcctgtaatcgctaatcctcgcaattt 10294908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 281
Target Start/End: Original strand, 33506175 - 33506244
Alignment:
Q  212 aatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||   | |||||||||||    
T  33506175 aatgacttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctataatcgctaat 33506244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 229 - 284
Target Start/End: Original strand, 35643865 - 35643920
Alignment:
Q  229 tttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  35643865 tttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcct 35643920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 41421975 - 41422049
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||   |||||||| ||||| | |||||||    
T  41421975 ttaatgatgtgtttcgtccttgcaattaggcgtcagttaaaaattagttcctgtaatcgttaatcttgacaattt 41422049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 36314298 - 36314367
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||| |||  |||||| |||||||||    
T  36314298 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcct 36314367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 10770493 - 10770559
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||| || ||| |||||||||||||||||||||||||| |||  |||||| |||||||||    
T  10770493 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcct 10770559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 40788423 - 40788497
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||| || ||||||||| |||| |||||||||||||||  | ||||||||||| || |||||||    
T  40788423 ttaatgatgtgtttcttccttgcaattaagcgttatttaaaaattagtccctctaatcgctaattctgacaattt 40788497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 33154876 - 33154951
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaa 289  Q
    ||||||||  ||||||||||||  |||||||||| |||||||||||||| |||  |||||||| ||||||| ||||    
T  33154876 tggcttaagtatgtgtttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctgacaa 33154951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 4322592 - 4322665
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaa 289  Q
    ||||||||||||||||||  |  |||||||||||||| |||||||||| |||  |||||||||||||||| ||||    
T  4322592 ggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtc-ctgtaatcgctaatcctgacaa 4322665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 36314696 - 36314626
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||| || ||| ||||||||||||||| |||||||||| |||  |||||| | |||||||    
T  36314696 tggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcct 36314626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 8041616 - 8041685
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  8041616 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 8041685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 48322377 - 48322446
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| || ||| |||||||||| | ||||||||||||| |||  |||||| |||||||||    
T  48322377 ggcttaatgatgtgattagtccttgcaattagacatcatttaaaaattcgtccctgtaattgctaatcct 48322446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 48322774 - 48322705
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| || ||| ||||||||||||||| |||||||||| |||  |||||| | |||||||    
T  48322774 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcct 48322705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 43607789 - 43607849
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||  |||||||| |||||||||||||||| |||  |||||||| |||||||    
T  43607789 atgtgtttcgtccctgcaattaagcgtcatttaaaaattggtccctgtaatcgttaatcct 43607849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 2796201 - 2796248
Alignment:
Q  237 ttgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||| |||||||||||||| |||  ||||||||||||||||    
T  2796201 ttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcct 2796248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 3596486 - 3596432
Alignment:
Q  228 gtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcc 283  Q
    |||||||| |||||||||||||| |||||||||||||||  |||||||| ||||||    
T  3596486 gtttcgtccttgcaattaggcgtgatttaaaaattagtc-ttgtaatcgttaatcc 3596432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 23276402 - 23276343
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcc 283  Q
    ||||||||| ||  |||||||||| |||||||||||||| |||  |||||||||||||||    
T  23276402 atgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcc 23276343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 43998148 - 43998211
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    ||||||| ||||||| |||||| ||||| | ||||||||||||||||||  |||||||| ||||    
T  43998148 ttaatgacgtgtttcatcattgtaattatgtgtcatttaaaaattagtccttgtaatcgttaat 43998211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 4323607 - 4323561
Alignment:
Q  238 tgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| |||||||||| |||  ||||||||||||||||    
T  4323607 tgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcct 4323561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 10770885 - 10770819
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||| || ||| || ||||||||||||||||||||||| |||  |||||| | |||||||    
T  10770885 ttaatgatgtgattagtccttacaattaggcgtcatttaaaaattcgtccctgtaattgttaatcct 10770819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 40758146 - 40758216
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||  |||| |||| || ||||||||||| ||| |||||||||| |||  ||||||||||||||||    
T  40758146 tggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcct 40758216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 25107213 - 25107282
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||  ||||||||| ||  |||||||||| |||||||||||||| |||  | ||||||||||||||    
T  25107213 ggcttaagtatgtgtttcatccctgcaattaggggtcatttaaaaattggtctctctaatcgctaatcct 25107282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 40758538 - 40758469
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||  |||| |||| || ||||||||||| |||||||||||||| |||  |||| |||||||||||    
T  40758538 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtctatgtattcgctaatcct 40758469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 47856396 - 47856461
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaa 289  Q
    ||||||||||||  |||||||| ||||| |||||||||| |||  |||||||| ||||||| ||||    
T  47856396 atgtgtttcgtccctgcaattaagcgtcgtttaaaaattggtccttgtaatcgttaatcctgacaa 47856461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 1079640 - 1079580
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||| ||  |||||||||| |||||||||||||| |||  |||||||| |||||||    
T  1079640 atgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcct 1079580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 6956257 - 6956317
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||  ||||||||||  |||||||||||||||||  | |||||| |||||||    
T  6956257 atgtgtttcgtccctgcaattagggatcatttaaaaattagtccctataatcgttaatcct 6956317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 47921457 - 47921513
Alignment:
Q  206 tagttaaatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaatt 262  Q
    ||||| ||||||||| ||||||||||   | ||||||||||||| ||||||||||||    
T  47921457 tagtttaatggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaatt 47921513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 222215 - 222138
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||| |||||||    
T  222215 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtacatgtaatcgctaatcctgacaattt 222138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 221789 - 221859
Alignment:
Q  213 atggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  221789 atggtttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagtc-ttgtaatcgctaatcct 221859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 920 - 987
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatc 282  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||    
T  920 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatc 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 1262 - 1211
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagt 265  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1262 tggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagt 1211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 8e-21; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 8875447 - 8875518
Alignment:
Q  213 atggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  8875447 atggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgttaatcct 8875518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 20153341 - 20153274
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatc 282  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||    
T  20153341 ggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccttgtaatcgctaatc 20153274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 20152780 - 20152850
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||||||||  ||||||||||||||||    
T  20152780 tggcttaatgatgtgtttcgtccatgcaattaagcgtcatttaaaaattagtctctgtaatcgctaatcct 20152850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 17544474 - 17544405
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||| |||||||    
T  17544474 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgttaatcct 17544405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 8875687 - 8875624
Alignment:
Q  221 atgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| |||||||    
T  8875687 atgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcct 8875624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 3656844 - 3656778
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    ||||||||||||||||||| | |||||||||| |||||||||||||||||||  |||||||||||||    
T  3656844 ggcttaatgatgtgtttcgaccttgcaattagacgtcatttaaaaattagtctttgtaatcgctaat 3656778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 33871764 - 33871695
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||  |||||||  |||||||    
T  33871764 ggcttaatgatgtgtttcgtccttgcaattaggcgccatttaaaaattagtctctgtaatcagtaatcct 33871695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 22298557 - 22298609
Alignment:
Q  230 ttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatc 282  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  22298557 ttcgtcattgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatc 22298609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 281
Target Start/End: Original strand, 33871338 - 33871405
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    |||||||||||||||||| ||| ||||||||| | ||||||||||||||||||  |||||||||||||    
T  33871338 tggcttaatgatgtgttttgtccttgcaattaagtgtcatttaaaaattagtccctgtaatcgctaat 33871405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 5024437 - 5024369
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||| |||| || ||||||||||| ||| |||||||||| |||| |||||||||||||||| |||||||    
T  5024437 atgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtaatcgctaatcctgacaattt 5024369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 21288084 - 21288016
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatc 282  Q
    |||||||||||||||||| ||| ||| |||||| |||| ||||||||||| ||  ||||||||||||||    
T  21288084 tggcttaatgatgtgttttgtccttgtaattagacgtcgtttaaaaattaatccatgtaatcgctaatc 21288016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 38442077 - 38442145
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||| |||| || ||||||||||| || ||||||||||| |||| |||||||||||||||| |||||||    
T  38442077 atgtatttcatcgttgcaattaggggttatttaaaaattggtcattgtaatcgctaatcctgacaattt 38442145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 31482401 - 31482471
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  31482401 tggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 31482471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 292
Target Start/End: Complemental strand, 35920613 - 35920535
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||||  |||| |||| |||| ||||||||| ||| |||||||||| |||  |||||||||||||||| |||||||    
T  35920613 tggcttaaatatgtatttcatcatagcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaattt 35920535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 41930910 - 41930844
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||| || ||| ||| |||||||||||||||||||||| |||  |||||| |||||||||    
T  41930910 ttaatgatgtgattagtccttgtaattaggcgtcatttaaaaattcgtccctgtaattgctaatcct 41930844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 297014 - 297083
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  297014 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 297083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 1505967 - 1506036
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  1505967 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 1506036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 20814563 - 20814494
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||  |||| |||| || ||||||||||| ||| |||||||||| |||| ||||||||||||||||    
T  20814563 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatcct 20814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 31482799 - 31482730
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  31482799 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatttgtccctgtaattgctaatcct 31482730  T

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Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 282
Target Start/End: Complemental strand, 13362661 - 13362589
Alignment:
Q  210 taaatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatc 282  Q
    ||||||| ||||  |||| |||| |||||||||||||| ||| |||||||||| |||  ||||||||||||||    
T  13362661 taaatggtttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatc 13362589  T

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Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 17202424 - 17202476
Alignment:
Q  240 caattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||| ||| |||||||||| |||| |||||||||||||||| |||||||    
T  17202424 caattaggggtcgtttaaaaattggtcactgtaatcgctaatcctgacaattt 17202476  T

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Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 24141461 - 24141521
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||  ||||||||| ||||||||||||||| |||  |||||||| |||||||    
T  24141461 atgtgtttcgtccctgcaattagacgtcatttaaaaattggtccctgtaatcgttaatcct 24141521  T

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Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 40150233 - 40150173
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||| ||||||||||| ||||||| |||||| |||  |||||||| |||||||    
T  40150233 atgtgtttcgtccttgcaattaggggtcattttaaaattggtccctgtaatcgttaatcct 40150173  T

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Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 6757887 - 6757934
Alignment:
Q  237 ttgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||||||||||| |||  |||||| |||||||||    
T  6757887 ttgcaattaggcgtcatttaaaaatttgtccctgtaattgctaatcct 6757934  T

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Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 6758262 - 6758215
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaatt 262  Q
    |||||||||||||| || ||| ||||||||||||||| ||||||||||    
T  6758262 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaatt 6758215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 1506357 - 1506295
Alignment:
Q  222 tgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||| | | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  1506357 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 1506295  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 41930516 - 41930585
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| || ||| ||||||||||  ||| |||||||||| |||  |||||| |||||||||    
T  41930516 ggcttaatgatgtgattagtccttgcaattagaggtcgtttaaaaatttgtccctgtaattgctaatcct 41930585  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 17544077 - 17544125
Alignment:
Q  244 taggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    ||||||| |||||||||||||||  |||||| ||||||||| |||||||    
T  17544077 taggcgtgatttaaaaattagtccctgtaattgctaatcctgacaattt 17544125  T

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Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 281
Target Start/End: Original strand, 18247080 - 18247152
Alignment:
Q  209 ttaaatggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaat 281  Q
    |||||| ||||||  |||| |||| || ||||||||||| ||| |||||||||| |||  |||||||||||||    
T  18247080 ttaaattgcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaat 18247152  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 292
Target Start/End: Original strand, 30005158 - 30005230
Alignment:
Q  220 aatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||| |||| |  ||||||||||| |||||||||||||||||   | |||| ||||||||| |||||||    
T  30005158 aatgatgtttttcatatttgcaattaggtgtcatttaaaaattagttcatataattgctaatcctgacaattt 30005230  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 39453309 - 39453369
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||| |||| || ||||||||||| ||| |||||||||| |||  ||||||||||||||||    
T  39453309 atgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcct 39453369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 12662 - 12596
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| |||||||    
T  12662 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcct 12596  T

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Target: scaffold0328 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 11566 - 11497
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||  |||||||| |||||||    
T  11566 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcct 11497  T

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Target: scaffold0328; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 11143 - 11207
Alignment:
Q  218 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatc 282  Q
    |||||||||||||||||| |||||||||| |||||| ||||||||||||  ||| ||||||||||    
T  11143 ttaatgatgtgtttcgtcgttgcaattagtcgtcatctaaaaattagtctctgtgatcgctaatc 11207  T

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Target: scaffold0599 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 2395 - 2462
Alignment:
Q  217 cttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| ||  ||||||||||||||||    
T  2395 cttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcct 2462  T

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Target: scaffold0205 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 21009 - 21078
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||| |||  |||||| |||||||||    
T  21009 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcct 21078  T

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Target: scaffold0205; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 21367 - 21299
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatc 282  Q
    ||||||||||||||| || ||| ||||||||||  ||| |||||||||| |||  |||||| |||||||    
T  21367 tggcttaatgatgtgattagtccttgcaattagaggtcgtttaaaaattcgtccctgtaattgctaatc 21299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 284
Target Start/End: Complemental strand, 12204 - 12137
Alignment:
Q  217 cttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||| ||   |||||||||||||||    
T  12204 cttaatgatgtgtttcgtccttgcaattaaacgtcatttaaaaattaatcccagtaatcgctaatcct 12137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 37991 - 37914
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcctcacaattt 292  Q
    |||||||  |||| |||| || ||||||||||| ||| |||||||||| |||  |||||||||||||||| |||||||    
T  37991 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaattt 37914  T

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Target: scaffold0559 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 1232 - 1302
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||| ||||||||||   | ||||||||||||| |||||||||||| |||  |||||| |||||||||    
T  1232 tggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcct 1302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 68964 - 69034
Alignment:
Q  214 tggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    ||||||||  |||| |||| || ||||||||||| |||||||||||||| |||  ||||||| ||||||||    
T  68964 tggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcct 69034  T

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Target: scaffold0075 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 14429 - 14498
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||  |||| |||| |||||||||||||| ||| ||||||||||||||  | || |||||||||||    
T  14429 ggcttaaatatgtatttcatcattgcaattaggagtcgtttaaaaattagtctatttattcgctaatcct 14498  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 141991 - 141922
Alignment:
Q  215 ggcttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||| |||||||||| | | ||||||||||||| ||||||||||||  ||  |||||| |||||||||    
T  141991 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcct 141922  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 239970 - 239910
Alignment:
Q  224 atgtgtttcgtcattgcaattaggcgtcatttaaaaattagtcagtgtaatcgctaatcct 284  Q
    |||||||||||| ||||| ||||| |||||||||||||| ||   |||||||| |||||||    
T  239970 atgtgtttcgtccttgcacttaggggtcatttaaaaattggttcctgtaatcgataatcct 239910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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