View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16791_low_26 (Length: 264)
Name: NF16791_low_26
Description: NF16791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16791_low_26 |
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Alignment Details
Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 37767683 - 37767931
Alignment:
| Q |
1 |
catcataaatttgcatattcatcacgaccagaccagaccaactatatatcatcagatccaataacaacattcaaattggttcaatctctctgcaaaggat |
100 |
Q |
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| T |
37767683 |
catcataaatttgcatattcatcacgaccagaccagaccaactatatatcatcagatccaataacaacattcaaattggttcaatctc--tgcaaaggat |
37767780 |
T |
|
| Q |
101 |
ccatgcatactcatttaaaagaacttagatttagtatataatatataccttccgaggtttaacttctcatccaaaagcatggatgcgacgaaagctacaa |
200 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
37767781 |
ccatgcatactcatttaaatgaacttagatttagtatataatatataccttccgaggtttaacttctcatccaagagcatggatgcgacgaaagctacaa |
37767880 |
T |
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| Q |
201 |
tcaaaagcattagagggttgaaagcagacgcatataaaggtcctttcttct |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37767881 |
tcaaaagcattagagggttgaaagcagacgcatataaaggtcctttcttct |
37767931 |
T |
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