View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16792_high_22 (Length: 239)
Name: NF16792_high_22
Description: NF16792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16792_high_22 |
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Alignment Details
Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 37107766 - 37107987
Alignment:
| Q |
1 |
tgttgttaccacaagttctttgctaaaacttttccctttaacttcaaatttagagcttataacactaatatttgcattatgtaatgtggatcattggctc |
100 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37107766 |
tgttgttaccacaagttcttggctaaaacttttccctttaacttcaaatttagagcttataacactaatatttgcattatgtaatgtggatcattggctc |
37107865 |
T |
|
| Q |
101 |
atgcacaaagaatcacacacattcacatagtcaacacattgatggtcgttggattgagatcacatggtctaggttacaatacagattttgannnnnnnct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
37107866 |
atgcacaaagaatcacacacattcacatagtcaacacattgatggtcgttggattgagatcacatggtctaggttacaatacagattttgatttttttct |
37107965 |
T |
|
| Q |
201 |
taaatctaaaataccaagcatt |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
37107966 |
taaatctaaaataccaagcatt |
37107987 |
T |
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