View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16792_high_5 (Length: 504)
Name: NF16792_high_5
Description: NF16792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16792_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 448; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 448; E-Value: 0
Query Start/End: Original strand, 18 - 476
Target Start/End: Complemental strand, 41775985 - 41775526
Alignment:
| Q |
18 |
attccgtgtcaattagaactgcatatttcaagaaacaattaagttagcatcactccatatttgtatgttttcatttattgattaatttgaaaatactagt |
117 |
Q |
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| T |
41775985 |
attccgtgtcaattagaactgcatatttcaagaaacaattaagttagcatcactccatatttgtatgttttcatttattgattaatttgaaaatactagt |
41775886 |
T |
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| Q |
118 |
acacctaatgaatccaacataaatttgaaaatagataagattttcttacgttccccacgagaattaacaaaagttgtttgtgcctgtgccatttctttct |
217 |
Q |
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| T |
41775885 |
acacctaatgaatccaacataaatttgaaaatagataagattttcttacgttccccacgagaattaacaaaagttgtttgtgcctgtgccatttctttct |
41775786 |
T |
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| Q |
218 |
gcaatttaacaaaaa-acagagaaaaagctgttgagtatattcaaatgagttatagaatattcatagtcttaaagttgtgaaagttttacctttagaaga |
316 |
Q |
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| T |
41775785 |
gcaatttaacaaaaacacagagaaaaagctgttgagtatattcaaatgagttatagaatattcatagtcttaaagttgtgaaagttttacctttagaaga |
41775686 |
T |
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| Q |
317 |
gtctcttctttccacatctcagttcccttaaagaaagaccttgaagaagttcctatccaaaaagaaaagacatatattcggtcaataattcaattttgaa |
416 |
Q |
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| T |
41775685 |
gtctcttctttccacatctcagttcccttaaagaaagaccttgaagaagttcctatccaaaaagaaaagacatatattcggtcaataattcaattttgaa |
41775586 |
T |
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| Q |
417 |
ctaatgagaagtgattgaaatgaaagcaagaaaaagtaacaaacctatgaagagaataat |
476 |
Q |
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| T |
41775585 |
ctaataagaagtgattgaaatgaaagcaagaaaaagtaacaaacctatgaagagaataat |
41775526 |
T |
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