View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16794_low_18 (Length: 227)
Name: NF16794_low_18
Description: NF16794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16794_low_18 |
 | |
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| [»] chr1 (20 HSPs) |
| |
|
| [»] chr5 (11 HSPs) |
| |
|
| [»] scaffold0633 (1 HSPs) |
| |
|
| [»] scaffold0027 (1 HSPs) |
| | |
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| [»] scaffold0172 (1 HSPs) |
| | |
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| [»] scaffold0036 (1 HSPs) |
| | |
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| [»] scaffold0182 (1 HSPs) |
| | |
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Alignment Details
Target: chr1 (Bit Score: 165; Significance: 2e-88; HSPs: 20)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 44920387 - 44920187
Alignment:
| Q |
29 |
gtctttggtatttctatt-aatatatatgagaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatg |
126 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| || |
|
|
| T |
44920387 |
gtctttggtatttctatttaatatatatgagaaatgttaacgagtgccctaagggcactttttaaggacttgaaatagtaaatttttatggaaaattgtg |
44920288 |
T |
|
| Q |
127 |
cattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagac |
226 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
44920287 |
cattcaatgcatcataaattgaagtgttaaacttttttaatgaataatttcttaattgagaaaccttaaagaatgcccttaaaacactcgttaacaagac |
44920188 |
T |
|
| Q |
227 |
c |
227 |
Q |
| |
|
| |
|
|
| T |
44920187 |
c |
44920187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 58 - 227
Target Start/End: Complemental strand, 14758698 - 14758528
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaa |
156 |
Q |
| |
|
||||||||||||||||| ||||| |||| ||||||||||| |||||||||||||| ||| |||||| ||||||||||||||| |||||||| |||||| |
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|
| T |
14758698 |
gaaatgttaacgagtgctctaaggacactctttaaggactttaaatagtaaatttttatgaaaaattgtgcattcaatgcatcgaaaattgaaatgttaa |
14758599 |
T |
|
| Q |
157 |
acttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||||||| |||||||| ||||||||||||||||| |
|
|
| T |
14758598 |
acttttttaaggaataatttcttaattggaaaactttaaagagtgcccttaggacactcgttaacaagacc |
14758528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 97 - 227
Target Start/End: Complemental strand, 41649986 - 41649855
Alignment:
| Q |
97 |
ttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaa |
195 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
41649986 |
ttgaaatagtaaatttttatggaaaattatgcattcaatgcatgggaaattgaaatgttaaacttttttaaggaataattttttaattgggaaaccttaa |
41649887 |
T |
|
| Q |
196 |
agaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
| | || ||||| |||| |||||||||||| |
|
|
| T |
41649886 |
aaagtgttcttaaggcacttgttaacaagacc |
41649855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 207
Target Start/End: Complemental strand, 51681775 - 51681629
Alignment:
| Q |
59 |
aaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaattttatggaaaattatgcattcaatgcatcataaattgaagtgttaaac |
158 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||| ||| ||||| ||||||| |||||||||| | ||||||||||| | ||||| ||||||||||| |
|
|
| T |
51681775 |
aaatgttaacgagtgttctaag-gcactttttaagaactctaaataataaattt-atggaaaattgtacattcaatgcaccggaaattaaagtgttaaac |
51681678 |
T |
|
| Q |
159 |
ttttttaaggaataatttcttaattgggaaaccttaaagaatgccctta |
207 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
51681677 |
tttttcaaagaataatttcttaattgggaaaccttaaagagtgccctta |
51681629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 227
Target Start/End: Original strand, 19547016 - 19547186
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaa |
156 |
Q |
| |
|
|||||| ||| |||||||||||| ||||| ||||||||||| | ||||||| |||| || |||| || ||||||||||||||| ||||||||| || |
|
|
| T |
19547016 |
gaaatgctaatgagtgccctaagggcactctttaaggactttatatagtaagtttttatagaaacttgtgcattcaatgcatcgggaattgaagtattgg |
19547115 |
T |
|
| Q |
157 |
acttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
|| |||| || ||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
19547116 |
acattttcaatgaataatttcttacttgggaatccttaaagaatgcccttagggcactcgttagcaagacc |
19547186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 30529463 - 30529366
Alignment:
| Q |
88 |
tttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattg |
184 |
Q |
| |
|
||||||||||| |||||||||||||| |||||||||| |||||| ||||||||| |||||||||||||||| ||||| || ||||||||||||||||| |
|
|
| T |
30529463 |
tttaaggactttaaatagtaaatttttatggaaaattgtgcatttaatgcatcagaaattgaagtgttaaattttttcaaagaataatttcttaattg |
30529366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 58 - 166
Target Start/End: Complemental strand, 46729311 - 46729202
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaa |
156 |
Q |
| |
|
||||| |||||||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||| ||||||||||||||| || |||||||||||| |
|
|
| T |
46729311 |
gaaatattaacgagtgccctaaaggcactctttaaggactttaaatagtaaatttttatggaaaattgtgcattcaatgcatcggaatttgaagtgttaa |
46729212 |
T |
|
| Q |
157 |
acttttttaa |
166 |
Q |
| |
|
||||||||| |
|
|
| T |
46729211 |
tcttttttaa |
46729202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 157
Target Start/End: Original strand, 36564461 - 36564560
Alignment:
| Q |
59 |
aaatgttaacgagtgccctaagagcactttttaaggacttgaaatagt-aaattttatggaaaattatgcattcaatgcatcataaattgaagtgttaaa |
157 |
Q |
| |
|
||||| || ||||||||||||||||||| ||||||||||| ||||||| |||||||||| |||||| |||||||||||| | | |||||||||||||||| |
|
|
| T |
36564461 |
aaatgctatcgagtgccctaagagcactctttaaggactttaaatagtaaaattttatgaaaaattgtgcattcaatgctttagaaattgaagtgttaaa |
36564560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 18032275 - 18032185
Alignment:
| Q |
110 |
ttttatggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaagaat |
200 |
Q |
| |
|
||||||||||| ||||||||| |||||||| ||||||||| ||||||||||| || ||||||||||||||| ||| | ||||||||| |
|
|
| T |
18032275 |
ttttatggaaacttatgcatttaatgcatcggaaattgaagcattaaactttttcaataaataatttcttaattcagaatctttaaagaat |
18032185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 35508444 - 35508388
Alignment:
| Q |
142 |
aaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaaga |
198 |
Q |
| |
|
|||||||||||||||| ||||| || ||||||||||||||||| |||||| |||||| |
|
|
| T |
35508444 |
aaattgaagtgttaaattttttcaaagaataatttcttaattgagaaaccataaaga |
35508388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 13792026 - 13792105
Alignment:
| Q |
119 |
aaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaaga |
198 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||||||||||||||| || |||||||| |||||| |||||||||||| |
|
|
| T |
13792026 |
aaattgtgcattaaatgcatcaataattgaagtgttaaactttttaaaaaaataattttttaattaaaaaaccttaaaga |
13792105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 26766067 - 26765978
Alignment:
| Q |
84 |
actttttaaggacttgaaatagtaaattt-tatggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaata |
172 |
Q |
| |
|
||||||||||||||| | ||||||| ||| ||| ||| ||||||||||||| ||||| |||||||| | ||||||||||| || ||||| |
|
|
| T |
26766067 |
actttttaaggactttagatagtaagtttatataaaaacttatgcattcaatccatcagaaattgaaatattaaactttttcaatgaata |
26765978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 34582740 - 34582667
Alignment:
| Q |
110 |
ttttatggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaatt |
183 |
Q |
| |
|
||||||| ||| ||||||||||||||||||| ||||||||| ||| ||||||| | ||||||||| |||||| |
|
|
| T |
34582740 |
ttttatgaaaacttatgcattcaatgcatcagaaattgaagcattatactttttcattgaataattttttaatt |
34582667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 46896018 - 46895945
Alignment:
| Q |
110 |
ttttatggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaatt |
183 |
Q |
| |
|
|||||| |||| |||||||||||||||||| |||||||| | ||| ||||||| || ||||||||||||||| |
|
|
| T |
46896018 |
ttttatagaaatttatgcattcaatgcatcggaaattgaaatattagactttttcaataaataatttcttaatt |
46895945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 43492198 - 43492266
Alignment:
| Q |
159 |
ttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
|||||||| ||||||||||| ||| |||| ||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
43492198 |
ttttttaaaaaataatttctttattaggaatccttaaagagtgcccttagggcactcgttaacaagacc |
43492266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 225
Target Start/End: Original strand, 1048690 - 1048803
Alignment:
| Q |
110 |
ttttatggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaa |
209 |
Q |
| |
|
||||||| |||||||||||||||| |||| |||||||| | || ||| ||||||| ||||||||| |||||| || | |||||||| |||||| ||| |
|
|
| T |
1048690 |
ttttatgaaaaattatgcattcaacgcattgaaaattgaactatttaac-tttttaaagaataattttttaatttggtatgcttaaagagtgccctgaaa |
1048788 |
T |
|
| Q |
210 |
tcactcgttaacaaga |
225 |
Q |
| |
|
||||| ||||||||| |
|
|
| T |
1048789 |
-cactcattaacaaga |
1048803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 207
Target Start/End: Complemental strand, 26297845 - 26297692
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaa-attttatggaaaattatgca---ttcaatgcatcataaattgaagtgt |
153 |
Q |
| |
|
|||||| ||| |||||||||| | ||| | ||||||||||| | ||||||| |||||| |||| || |||| ||| ||||||| |||||||| | | |
|
|
| T |
26297845 |
gaaatgctaatgagtgccctaggggcattctttaaggactttagatagtaagtttttatagaaacttgtgcattcttctatgcatcggaaattgaaatat |
26297746 |
T |
|
| Q |
154 |
taaacttttttaaggaataatttcttaattgggaaaccttaaagaatgccctta |
207 |
Q |
| |
|
||| |||||| || ||||| |||| |||||||||| |||||||| |||||||| |
|
|
| T |
26297745 |
taagctttttcaatgaatagtttcataattgggaatacttaaagagtgccctta |
26297692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 8462944 - 8462859
Alignment:
| Q |
142 |
aaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
|||||||||||||||||||||| || |||||||| ||| ||| ||| |||||||| ||| || || ||||||||||| ||||| |
|
|
| T |
8462944 |
aaattgaagtgttaaactttttcaaataataattttttagttgaaaaatcttaaagagtgctctaaagacactcgttaacgagacc |
8462859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 25670903 - 25670870
Alignment:
| Q |
62 |
tgttaacgagtgccctaagagcactttttaagga |
95 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
25670903 |
tgttaacgagtgccctaagagcaccttttaagga |
25670870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 14890497 - 14890593
Alignment:
| Q |
102 |
atagtaaattttatggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaaga |
198 |
Q |
| |
|
||||||||||| || |||| || ||||||||||| ||| |||||||||| |||| ||||| || |||||||| |||||| ||| ||||||||| |
|
|
| T |
14890497 |
atagtaaatttgatagaaatttgtgcattcaatgtatcggaaattgaagtattaagttttttcaattaataattttttaattaagaatccttaaaga |
14890593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 104; Significance: 5e-52; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 58 - 227
Target Start/End: Original strand, 248428 - 248599
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaa |
156 |
Q |
| |
|
||||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| |||||||||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
248428 |
gaaatgttaactagtgccttaagggcactctttaaggacttgaaatagtaaatttttatggaaaattgtgcattcaatacatcggaaattgaagtgttaa |
248527 |
T |
|
| Q |
157 |
acttttttaaggaa-taatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
|||||||||| ||| |||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
248528 |
acttttttaaagaaataatttcttaattgagaaaccttaaagagtgcccttaagacactcgttaacaagacc |
248599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 227
Target Start/End: Complemental strand, 42877382 - 42877213
Alignment:
| Q |
59 |
aaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaa |
157 |
Q |
| |
|
|||||||||||||| ||||| ||||| ||||| ||||| |||||||||||||| |||||||||| || ||||||| ||| |||||||| | ||||| |
|
|
| T |
42877382 |
aaatgttaacgagtattctaagggcactctttaaagactttaaatagtaaatttttatggaaaattgtgtattcaatacattgaaaattgaaattttaaa |
42877283 |
T |
|
| Q |
158 |
cttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
||||||| | ||||||||||| ||||| ||||| ||||||| || ||||| | ||||||||| ||||||| |
|
|
| T |
42877282 |
cttttttcatgaataatttctcaattgagaaactttaaagagtgtccttagaacactcgttagcaagacc |
42877213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 227
Target Start/End: Original strand, 20125649 - 20125789
Alignment:
| Q |
86 |
tttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattg |
184 |
Q |
| |
|
||||||||||||| |||||||||||||| ||| |||||| |||||| | |||||| ||||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
20125649 |
tttttaaggactttaaatagtaaatttttatgaaaaattgtgcatttagtgcatcgaaaattgaagtgttaaacttttttaaagaataa-ttcttaattg |
20125747 |
T |
|
| Q |
185 |
ggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
|||| ||||| | |||| |||| ||||||||||||||||| |
|
|
| T |
20125748 |
aaaaactttaaa-agtgcctttaagacactcgttaacaagacc |
20125789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 183
Target Start/End: Complemental strand, 11010383 - 11010257
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaa |
156 |
Q |
| |
|
|||||| ||||||||| |||||| ||| ||||||||||||| | |||||| |||| ||||||| || || ||||||||||||| |||||||||| ||| |
|
|
| T |
11010383 |
gaaatgctaacgagtggcctaagggcattttttaaggacttcagatagtatgtttttatggaaagttgtgtattcaatgcatcagaaattgaagtattag |
11010284 |
T |
|
| Q |
157 |
acttttttaaggaataatttcttaatt |
183 |
Q |
| |
|
||||||| || ||||| |||||||||| |
|
|
| T |
11010283 |
actttttcaatgaatagtttcttaatt |
11010257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 58 - 207
Target Start/End: Complemental strand, 18988892 - 18988742
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaa-ttttatggaaaattatgcattcaatgcatcataaattgaagtgttaa |
156 |
Q |
| |
|
|||||| |||||||||||||||| | ||||||||||||| | | |||||||| ||||||| ||| ||||||||||||||||| ||||| |||| ||| |
|
|
| T |
18988892 |
gaaatgataacgagtgccctaagggtactttttaaggacattagatagtaaatttttatgaaaacttatgcattcaatgcattggaaatttaagtattag |
18988793 |
T |
|
| Q |
157 |
acttttttaaggaataatttcttaattgggaaaccttaaagaatgccctta |
207 |
Q |
| |
|
|||||||| | ||||| || |||| | |||| ||| ||||| |||||||| |
|
|
| T |
18988792 |
acttttttgatgaatagatttttaagtaggaatcctcaaagagtgccctta |
18988742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 16980878 - 16980752
Alignment:
| Q |
57 |
agaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgtta |
155 |
Q |
| |
|
||||||| |||||||| |||||| |||| ||||| ||||| |||||||| ||||| ||| |||||||| ||||||||| ||| |||||||||||||| |
|
|
| T |
16980878 |
agaaatgctaacgagtatcctaaggacactctttaaagactttaaatagtacatttttatgaaaaattatacattcaatgtatcggaaattgaagtgtta |
16980779 |
T |
|
| Q |
156 |
aacttt-tttaaggaataatttcttaa |
181 |
Q |
| |
|
|||||| | || |||||||||||||| |
|
|
| T |
16980778 |
aactttctcaaaagaataatttcttaa |
16980752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 227
Target Start/End: Original strand, 40944278 - 40944403
Alignment:
| Q |
102 |
atagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaagaat |
200 |
Q |
| |
|
|||||||||||| ||||||| || | ||||||||||||| ||||||||| ||| ||||||| || |||||||||||||||| ||| ||| ||| | | |
|
|
| T |
40944278 |
atagtaaatttttatggaaatttgtacattcaatgcatcgaaaattgaagcattatactttttcaatgaataatttcttaatttagaatcctaaaaaagt |
40944377 |
T |
|
| Q |
201 |
gcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
| ||||| | ||||||||||||||||| |
|
|
| T |
40944378 |
g-ccttagaacactcgttaacaagacc |
40944403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 13978684 - 13978769
Alignment:
| Q |
142 |
aaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
|||||||||| || |||||||||||| ||||||||||| ||||| || ||||||| | |||| ||| ||||||||||||||||| |
|
|
| T |
13978684 |
aaattgaagtttttaacttttttaagaaataatttctttattggaaatccttaaaaagtgcctttaggacactcgttaacaagacc |
13978769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 227
Target Start/End: Original strand, 19113695 - 19113766
Alignment:
| Q |
156 |
aacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
|||||||| || ||||| |||||||||| ||| |||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
19113695 |
aactttttaaatgaatattttcttaatttcgaatccttaaagaatgcccttagggcactcgttagcaagacc |
19113766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 591276 - 591361
Alignment:
| Q |
142 |
aaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
|||||||||| || |||||||||| |||||||||||| ||| | || ||||||||| || | ||| ||||||||||||||||| |
|
|
| T |
591276 |
aaattgaagttttcgacttttttaaagaataatttctttattagaaatccttaaagagtgtctttagggcactcgttaacaagacc |
591361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 4857329 - 4857272
Alignment:
| Q |
127 |
cattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattg |
184 |
Q |
| |
|
||||||||| ||| ||||| || ||||||||||||| || ||||||||||||||||| |
|
|
| T |
4857329 |
cattcaatgtatcgaaaattaaaatgttaaactttttcaaagaataatttcttaattg |
4857272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 16)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 3973950 - 3973783
Alignment:
| Q |
59 |
aaatgttaacgagtgccctaagagcact-ttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaa |
156 |
Q |
| |
|
||||||||||||||||||| | ||||| ||||||||||||||||||||||||||| |||||||||| |||||| |||||||| ||||||||| ||| | |
|
|
| T |
3973950 |
aaatgttaacgagtgccct--gggcactcttttaaggacttgaaatagtaaatttttatggaaaattgtgcatttaatgcatcggaaattgaagcgttga |
3973853 |
T |
|
| Q |
157 |
acttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagac |
226 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| ||||||||||| |
|
|
| T |
3973852 |
acttttttaaggaataatttcttaattgggaaaccttaaagagtgctcttagggcacttgttaacaagac |
3973783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 58 - 226
Target Start/End: Original strand, 3995926 - 3996094
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcact-ttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgtta |
155 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||||||||||||||||||||||||| |||||||||| |||||| |||||||| ||||||||| ||| |
|
|
| T |
3995926 |
gaaatgttaacgagtgccct--gggcactcttttaaggacttgaaatagtaaatttttatggaaaattgtgcatttaatgcatcggaaattgaagcgttg |
3996023 |
T |
|
| Q |
156 |
aacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagac |
226 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| ||| |||| |||| ||||||||||| |
|
|
| T |
3996024 |
aacttttttaaggaataattgcttaattgggaaaccttaaagagtgctcttagggcacttgttaacaagac |
3996094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 87 - 226
Target Start/End: Original strand, 4009482 - 4009622
Alignment:
| Q |
87 |
ttttaaggacttgaaatagtaaatttta-tggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgg |
185 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||||||| |||||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
4009482 |
ttttaaggacatgaaatagtaaatttttgtggaaaattgtgcatttaatgcatcggaaattgaagcgttgaacttttttaaggaataatttcttaattgg |
4009581 |
T |
|
| Q |
186 |
gaaaccttaaagaatgcccttaaatcactcgttaacaagac |
226 |
Q |
| |
|
||||||||||||| ||| |||| |||| ||||||||||| |
|
|
| T |
4009582 |
gaaaccttaaagagtgctcttagggcacttgttaacaagac |
4009622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 58 - 209
Target Start/End: Complemental strand, 49682306 - 49682154
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaa |
156 |
Q |
| |
|
||||||||||||| || |||||||| | ||||||||||||| |||||||||||||| || ||||||| |||||||||||| || |||||||| |||||| |
|
|
| T |
49682306 |
gaaatgttaacgaatgtcctaagagtattttttaaggactttaaatagtaaatttttatagaaaattgtgcattcaatgcttcggaaattgaaatgttaa |
49682207 |
T |
|
| Q |
157 |
acttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaa |
209 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||||| | ||||||||| |
|
|
| T |
49682206 |
acttttttaaggaataattttttaattgaaaaaccttaaaaatggcccttaaa |
49682154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 21813124 - 21813256
Alignment:
| Q |
59 |
aaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaa |
157 |
Q |
| |
|
||||||||| ||||| |||||| ||||| |||||||| || |||||||||||||| |||||||||||||||||||||||||| || || |||||||||| |
|
|
| T |
21813124 |
aaatgttaatgagtgtcctaagggcactctttaaggattttaaatagtaaatttttatggaaaattatgcattcaatgcatcggaatttaaagtgttaaa |
21813223 |
T |
|
| Q |
158 |
cttttttaaggaataatttcttaattgggaaac |
190 |
Q |
| |
|
|||||| || ||||||||||||||||| ||||| |
|
|
| T |
21813224 |
ctttttcaatgaataatttcttaattgagaaac |
21813256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 55 - 183
Target Start/End: Complemental strand, 39145109 - 39144981
Alignment:
| Q |
55 |
tgagaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaattttatggaaaattatgcattcaatgcatcataaattgaagtgtt |
154 |
Q |
| |
|
||||||||| ||| ||||| | |||| |||| ||||| ||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
39145109 |
tgagaaatgctaatgagtgtcttaaggacactctttaaagactttaaataataaattttatagaaaattatgcattcaatgcatcggaaattgaagtgtt |
39145010 |
T |
|
| Q |
155 |
aaacttttttaaggaataatttcttaatt |
183 |
Q |
| |
|
||| |||||||| || |||||||||||| |
|
|
| T |
39145009 |
aaaattttttaaaaaacaatttcttaatt |
39144981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 31294441 - 31294370
Alignment:
| Q |
125 |
tgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaa |
196 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||| || |||||||||||||||| | |||||||||| |
|
|
| T |
31294441 |
tgcattcaatgcatcggaaattaaagtgttaaactttttcaaagaataatttcttaattagaaaaccttaaa |
31294370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 205
Target Start/End: Complemental strand, 34285491 - 34285341
Alignment:
| Q |
52 |
atatgagaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaag |
150 |
Q |
| |
|
||||| ||||||||||||||||| ||||| | ||| ||||| |||| |||||||||||||| || ||| || |||||| |||| | | |||||| |
|
|
| T |
34285491 |
atatgggaaatgttaacgagtgctctaagggtactctttaataactttaaatagtaaatttttataaaaatttgtgcatttaatgga-----agttgaag |
34285397 |
T |
|
| Q |
151 |
tgttaaacttttttaaggaata-atttcttaattgggaaaccttaaagaatgccct |
205 |
Q |
| |
|
|||||||||||||||| ||||| |||| ||||||||||| ||||||||| |||||| |
|
|
| T |
34285396 |
tgttaaacttttttaaagaatatattttttaattgggaagccttaaagagtgccct |
34285341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 227
Target Start/End: Original strand, 7278143 - 7278302
Alignment:
| Q |
69 |
gagtgccctaagagcactttttaaggacttgaaatagtaa-attttatggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaag |
167 |
Q |
| |
|
|||||||||||| ||||| ||||| |||| ||||||||| |||||| |||| || |||||| ||||||| |||| ||| | |||| ||||| ||| |
|
|
| T |
7278143 |
gagtgccctaagggcactccttaagaactttaaatagtaagtttttatcgaaacttgtgcattgaatgcattggaaatcgaaatattaagcttttctaat |
7278242 |
T |
|
| Q |
168 |
gaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
||||| |||| |||||| | | ||||||||| |||||||| ||||||||| ||||||| |
|
|
| T |
7278243 |
gaatagtttcgtaattgagtatccttaaagagtgcccttagggcactcgttagcaagacc |
7278302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 183
Target Start/End: Complemental strand, 29212815 - 29212713
Alignment:
| Q |
82 |
gcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttctta |
180 |
Q |
| |
|
||||| ||||| ||||| | ||| |||||||| || |||| || |||||||||| ||||||||||||||| ||| ||||||| || ||||| ||||||| |
|
|
| T |
29212815 |
gcactctttaaagactttagatattaaatttttatagaaacttgtgcattcaatacatcataaattgaagcattagactttttcaatgaatagtttctta |
29212716 |
T |
|
| Q |
181 |
att |
183 |
Q |
| |
|
||| |
|
|
| T |
29212715 |
att |
29212713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 194
Target Start/End: Original strand, 32606385 - 32606486
Alignment:
| Q |
94 |
gacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaacct |
192 |
Q |
| |
|
||||| ||||| |||||||| ||| |||||||||||||||||||||| |||||||| |||||| ||||| || ||||||| ||||||| |||||| |
|
|
| T |
32606385 |
gactttaaataataaatttttatgaaaaattatgcattcaatgcatcggaaattgaaatgttaacttttttcaaaatataattttttaattgaaaaacct |
32606484 |
T |
|
| Q |
193 |
ta |
194 |
Q |
| |
|
|| |
|
|
| T |
32606485 |
ta |
32606486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 32734719 - 32734654
Alignment:
| Q |
158 |
cttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaa |
223 |
Q |
| |
|
||||||||| |||||||||||| ||| |||| ||||||||| |||||||| ||||||||||||| |
|
|
| T |
32734719 |
cttttttaaagaataatttctttattaggaatccttaaagagtgcccttagggcactcgttaacaa |
32734654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 197
Target Start/End: Complemental strand, 36494262 - 36494174
Alignment:
| Q |
110 |
ttttatggaaaattatgcattcaatgcatcataaattgaagtgttaaactttttt-aaggaataatttcttaattgggaaaccttaaag |
197 |
Q |
| |
|
||||||||||| || |||||||||| ||| |||||||||| ||| | |||||| || ||||| ||||||||||||||| |||||||| |
|
|
| T |
36494262 |
ttttatggaaacttgtgcattcaatacattggaaattgaagtattagatttttttcaatgaatagtttcttaattgggaatccttaaag |
36494174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 29484888 - 29484942
Alignment:
| Q |
142 |
aaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaa |
196 |
Q |
| |
|
|||||||||||||| | |||||||| |||||||||||||||| | ||| |||||| |
|
|
| T |
29484888 |
aaattgaagtgttagatttttttaaagaataatttcttaattagaaaatcttaaa |
29484942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 46895948 - 46895989
Alignment:
| Q |
122 |
ttatgcattcaatgcatcataaattgaagtgttaaacttttt |
163 |
Q |
| |
|
||||||||||||||||||| |||||||||| || |||||||| |
|
|
| T |
46895948 |
ttatgcattcaatgcatcaaaaattgaagtctttaacttttt |
46895989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 52299081 - 52299040
Alignment:
| Q |
157 |
acttttttaaggaataatttcttaattgggaaaccttaaaga |
198 |
Q |
| |
|
||||||||||||||||||||||| ||| |||| ||||||||| |
|
|
| T |
52299081 |
acttttttaaggaataatttctttattaggaatccttaaaga |
52299040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 90; Significance: 1e-43; HSPs: 19)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 59 - 207
Target Start/End: Original strand, 43238109 - 43238258
Alignment:
| Q |
59 |
aaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaa |
157 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||| |||| |||||||||||||| |||||||||| | |||| |||||||| |||||||||||||||| |
|
|
| T |
43238109 |
aaatgttaacgagtgccctaagtgcactctttaagaactttaaatagtaaatttttatggaaaattctacatttaatgcatcgaaaattgaagtgttaaa |
43238208 |
T |
|
| Q |
158 |
cttttttaaggaataatttcttaattgggaaaccttaaagaatgccctta |
207 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| | |||||| |
|
|
| T |
43238209 |
cttttttaaggaataatttcttaattgaaaaaccttaaagagtaccctta |
43238258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 14237272 - 14237126
Alignment:
| Q |
53 |
tatgagaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagt |
151 |
Q |
| |
|
|||||||||| |||||||||||||| |||||| | ||||||||||| |||||||||||||| |||||||||| |||||| |||||||| |||||||||| |
|
|
| T |
14237272 |
tatgagaaatattaacgagtgcccttagagcattctttaaggactttaaatagtaaatttttatggaaaattgtgcatttaatgcatcggaaattgaagt |
14237173 |
T |
|
| Q |
152 |
gttaaacttttttaaggaataatttcttaattgggaaaccttaaaga |
198 |
Q |
| |
|
||||||||||| || |||||||||| ||||||| ||| |||||||| |
|
|
| T |
14237172 |
gttaaacttttatatggaataattttttaattgaaaaatcttaaaga |
14237126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 227
Target Start/End: Original strand, 20142407 - 20142576
Alignment:
| Q |
59 |
aaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaa |
157 |
Q |
| |
|
|||||||||||||| || |||||| | ||||||||||| ||||| |||||||| |||| ||||| |||||| |||||||| ||||| |||||||||| |
|
|
| T |
20142407 |
aaatgttaacgagtattcttagagcattatttaaggactttaaataataaatttttatgggaaattgtgcatttaatgcatcgaaaattaaagtgttaaa |
20142506 |
T |
|
| Q |
158 |
cttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
|||||| || |||||||||||||||| | |||||||||| || ||||| ||||||||||||||||| |
|
|
| T |
20142507 |
ctttttaaaaaaataatttcttaattgaaataccttaaagagtgtccttaggacactcgttaacaagacc |
20142576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 200
Target Start/End: Complemental strand, 23984392 - 23984250
Alignment:
| Q |
59 |
aaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaa |
157 |
Q |
| |
|
||||| ||||||||| | ||||| |||| ||||||| || |||||||||||||| ||| |||||| ||| |||| || |||| ||||||| |||||||| |
|
|
| T |
23984392 |
aaatgctaacgagtgtcttaagaacactccttaaggattttaaatagtaaatttttatgaaaaattgtgctttcagtgtatcaaaaattgaggtgttaaa |
23984293 |
T |
|
| Q |
158 |
cttttttaaggaataatttcttaattgggaaaccttaaagaat |
200 |
Q |
| |
|
||||||||| ||||||||||||||||| |||| ||||||||| |
|
|
| T |
23984292 |
cttttttaaagaataatttcttaattgaaaaactttaaagaat |
23984250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 83 - 196
Target Start/End: Original strand, 14855576 - 14855690
Alignment:
| Q |
83 |
cactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaa |
181 |
Q |
| |
|
|||| ||||| ||||| ||||| |||||||| ||| |||| | | |||| ||||||| ||||||||||||||||||||||| || ||||||||| |||| |
|
|
| T |
14855576 |
cactctttaaagactttaaataataaatttttatgaaaaagtgtccatttgatgcatcgtaaattgaagtgttaaactttttcaaagaataattttttaa |
14855675 |
T |
|
| Q |
182 |
ttgggaaaccttaaa |
196 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
14855676 |
tagggaaaccttaaa |
14855690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 33285921 - 33286033
Alignment:
| Q |
87 |
ttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgg |
185 |
Q |
| |
|
|||||||||||| |||||||||||||| ||| |||||| || ||| ||| |||| |||||||| ||||||| ||||| || |||||||||||||||| |
|
|
| T |
33285921 |
ttttaaggactttaaatagtaaatttttatgaaaaattgtgtatttaatacatcgaaaattgaaatgttaaattttttcaaaaaataatttcttaattga |
33286020 |
T |
|
| Q |
186 |
gaaaccttaaaga |
198 |
Q |
| |
|
|||||||||||| |
|
|
| T |
33286021 |
taaaccttaaaga |
33286033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 10565485 - 10565358
Alignment:
| Q |
57 |
agaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgtta |
155 |
Q |
| |
|
|||||||||||| |||| | |||||| | | ||||| ||||| | |||||||||||| ||||||| || |||||||||| ||||| ||||| |||| ||| |
|
|
| T |
10565485 |
agaaatgttaaccagtgtcttaagagtattatttaaagactttagatagtaaatttttatggaaatttgtgcattcaatacatcaaaaattaaagtatta |
10565386 |
T |
|
| Q |
156 |
aacttttttaaggaataatttcttaatt |
183 |
Q |
| |
|
||||||| || ||||| |||||||||| |
|
|
| T |
10565385 |
gactttttcaatgaatagtttcttaatt |
10565358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 61 - 207
Target Start/End: Complemental strand, 4166630 - 4166484
Alignment:
| Q |
61 |
atgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaa--ttttatggaaaattatgcattcaatgcatcataaattgaagtgttaaac |
158 |
Q |
| |
|
||||||||||||||| ||||| |||||||||| ||||| | ||| |||| ||||||||||| || ||||||||||| || |||||||| | || ||| |
|
|
| T |
4166630 |
atgttaacgagtgccgtaaga-cactttttaaagactttagata-taaagtttttatggaaacttgtgcattcaatgtattggaaattgaaatattgaac |
4166533 |
T |
|
| Q |
159 |
ttttttaaggaataatttcttaattgggaaaccttaaagaatgccctta |
207 |
Q |
| |
|
||||| || |||||||||||| ||| ||| ||||||||| |||||||| |
|
|
| T |
4166532 |
tttttcaatgaataatttcttgattatgaatccttaaagagtgccctta |
4166484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 110 - 227
Target Start/End: Complemental strand, 32332939 - 32332822
Alignment:
| Q |
110 |
ttttatggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaa |
209 |
Q |
| |
|
||||||| ||| |||| ||||||||||||| |||| ||||| |||||| |||| || ||||||||| |||||| |||| | ||||||| | || ||||| |
|
|
| T |
32332939 |
ttttatgaaaacttatacattcaatgcatcgaaaatcgaagtattaaacattttcaatgaataattttttaattaggaatctttaaagagtaccattaaa |
32332840 |
T |
|
| Q |
210 |
tcactcgttaacaagacc |
227 |
Q |
| |
|
||||||||| ||||||| |
|
|
| T |
32332839 |
acactcgttagcaagacc |
32332822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 223
Target Start/End: Complemental strand, 44042648 - 44042510
Alignment:
| Q |
86 |
tttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattg |
184 |
Q |
| |
|
||||||| || || ||||||||| |||| || |||| || |||||||||||||| |||||||||| || |||||||| || ||||| |||||||||| |
|
|
| T |
44042648 |
tttttaaagattttaaatagtaagtttttatagaaatttgtgcattcaatgcattggaaattgaagtattgaactttttcaatgaatagtttcttaatta |
44042549 |
T |
|
| Q |
185 |
ggaaaccttaaagaatgcccttaaatcactcgttaacaa |
223 |
Q |
| |
|
||| ||||||||| || ||||| ||||||||||||| |
|
|
| T |
44042548 |
tgaatccttaaagagtgtccttagggcactcgttaacaa |
44042510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 11078202 - 11078117
Alignment:
| Q |
55 |
tgagaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatc |
139 |
Q |
| |
|
||||||||| ||||||||| | ||| ||||||||||| ||| |||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
11078202 |
tgagaaatgctaacgagtgtcgtaatgacactttttaagaactctaaatagtaaatttttatgaaaaattatgcattcaatgcatc |
11078117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 44254179 - 44254264
Alignment:
| Q |
142 |
aaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
|||||||||| || |||||||||||||| |||||||| ||| | || ||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
44254179 |
aaattgaagtttttgacttttttaaggaagaatttctttattagaaatccttaaagagtgcccttaggacactcgttaacaagacc |
44254264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 138
Target Start/End: Complemental strand, 26750690 - 26750608
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaa-atttt-atggaaaattatgcattcaatgcat |
138 |
Q |
| |
|
||||||||||||||||| || ||||||| |||||| |||| ||||||||| ||||| ||| ||||||||||||| ||||||| |
|
|
| T |
26750690 |
gaaatgttaacgagtgcgctcggagcactctttaagcactttaaatagtaagattttaatgaaaaattatgcattgaatgcat |
26750608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 6904307 - 6904192
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaa |
156 |
Q |
| |
|
|||||| ||| |||||| || || ||||| ||||| ||||| | ||||||| |||| ||||||| || ||| ||||||||||| ||||||||| |||| |
|
|
| T |
6904307 |
gaaatgctaatgagtgctcttagggcactctttaaagactttagatagtaattttttatggaaacttgtgcgttcaatgcatcggaaattgaagcattaa |
6904208 |
T |
|
| Q |
157 |
acttttttaaggaata |
172 |
Q |
| |
|
||||||| || ||||| |
|
|
| T |
6904207 |
actttttcaatgaata |
6904192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 39312194 - 39312245
Alignment:
| Q |
128 |
attcaatgcatcataaattgaagtgttaaacttttttaaggaataatttctt |
179 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||| || |||||||||||| |
|
|
| T |
39312194 |
attcaatgcatcggaaattgaagtattaaactttttcaatgaataatttctt |
39312245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 3100166 - 3100207
Alignment:
| Q |
110 |
ttttatggaaaattatgcattcaatgcatcataaattgaagt |
151 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| |||||||||| |
|
|
| T |
3100166 |
ttttatggaaatttatgaattcaatgcatcaaaaattgaagt |
3100207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 29487123 - 29487195
Alignment:
| Q |
153 |
ttaaacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaaga |
225 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||| | ||||| |||||| || ||||||||||||||| |
|
|
| T |
29487123 |
ttaaacttttttaaagaataatttcttaatttagaatattaaaagagtgccctggaaacactcgttaacaaga |
29487195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 30674943 - 30675007
Alignment:
| Q |
100 |
aaatagtaa-attttatggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttt |
163 |
Q |
| |
|
||||||||| |||||||||||| | |||||||||||||| ||||||||| |||| |||||||| |
|
|
| T |
30674943 |
aaatagtaatattttatggaaatatgtgcattcaatgcattgtaaattgaaatgtttaacttttt |
30675007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 40914537 - 40914593
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaa-atagtaaatttt |
113 |
Q |
| |
|
||||||||||||||| || ||||| |||| ||||||||||| || |||||||||||| |
|
|
| T |
40914537 |
gaaatgttaacgagtaccttaagaacactctttaaggacttaaagatagtaaatttt |
40914593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 79; Significance: 4e-37; HSPs: 15)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 38949021 - 38949167
Alignment:
| Q |
53 |
tatgagaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagt |
151 |
Q |
| |
|
|||| |||||||||||||||| |||| ||||| |||||||||||||||||||||||||| ||| |||||| ||||||||||||||| |||||||||| |
|
|
| T |
38949021 |
tatgggaaatgttaacgagtgttttaagggcactctttaaggacttgaaatagtaaatttttatgaaaaattgtgcattcaatgcatcggaaattgaagt |
38949120 |
T |
|
| Q |
152 |
gttaaacttttttaaggaataatttcttaattgggaaaccttaaaga |
198 |
Q |
| |
|
|||||| ||||||||| |||||||| |||||||| ||| |||||||| |
|
|
| T |
38949121 |
gttaaatttttttaagaaataattttttaattggaaaatcttaaaga |
38949167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 31655644 - 31655473
Alignment:
| Q |
59 |
aaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatt----ttatggaaaattatgcattcaatgcatcataaattgaagtgtt |
154 |
Q |
| |
|
||||||||||||||| ||||||| ||| |||||||||| |||||||||| |||| ||||||| |||||||||| |||| | ||||||||||| |
|
|
| T |
31655644 |
aaatgttaacgagtgtcctaagaacaccgattaaggactttaaatagtaaaaaaaaattatagaaaattgtgcattcaatacatcggatattgaagtgtt |
31655545 |
T |
|
| Q |
155 |
aaacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagac |
226 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||||||||||| | |||||| | |||||||||||||||| |
|
|
| T |
31655544 |
aaacttttttaaagaataattttttaattgggaaaccttaaaaagtgccctaagggcactcgttaacaagac |
31655473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 23133065 - 23133156
Alignment:
| Q |
107 |
aaattttatggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaaga |
198 |
Q |
| |
|
||||||||| ||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
23133065 |
aaattttatagaaaattgtgtattcaatgcatcggaaattgaagtgttaaacttttttaaggaataatttcttaattgagaaaccataaaga |
23133156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 88 - 198
Target Start/End: Complemental strand, 38380567 - 38380456
Alignment:
| Q |
88 |
tttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattggg |
186 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||| || ||| ||||| ||||||||| |
|
|
| T |
38380567 |
tttaaggactttaaatagtaaatttttatggaaaattatgcatttaatgcttcggaaattgaagtgttaaactttttcaaagaaaaatttattaattggg |
38380468 |
T |
|
| Q |
187 |
aaaccttaaaga |
198 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
38380467 |
aaactttaaaga |
38380456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 220
Target Start/End: Complemental strand, 32893149 - 32892986
Alignment:
| Q |
59 |
aaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaa-ttttatggaaaattatgcattcaatgcatcataaattgaagtgttaaa |
157 |
Q |
| |
|
||||| |||||| || ||||| | || |||| |||||||| |||||||||| |||||| ||||||| ||||||||||||||| |||||||| ||||||| |
|
|
| T |
32893149 |
aaatgctaacgaatgtcctaataacatttttaaaggactttaaatagtaaacttttatagaaaattgtgcattcaatgcatcgaaaattgaaatgttaaa |
32893050 |
T |
|
| Q |
158 |
cttttttaaggaataatttcttaattgggaaacctt-aaagaatgcccttaaatcactcgttaa |
220 |
Q |
| |
|
||||||| | ||||| |||||||||| ||||||| ||||| || ||||||| |||||||||| |
|
|
| T |
32893049 |
ctttttttaaaaataaattcttaattgaaaaaccttaaaagagtgtccttaaaacactcgttaa |
32892986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 50131113 - 50131029
Alignment:
| Q |
145 |
ttgaagtgttaaa--cttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
50131113 |
ttgaagtgttaaaaactttttcaaagaataatttcttaattgggaaaccttaaagaatgccctcagggcactcgttaacaagacc |
50131029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 39804890 - 39804995
Alignment:
| Q |
95 |
acttgaaatagtaaatttt--atggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaacct |
192 |
Q |
| |
|
|||| |||||||||||||| ||| |||||| |||||| |||| |||| |||||||||||||||| ||||| || |||||||| |||||||| |||||| |
|
|
| T |
39804890 |
actttaaatagtaaattttttatgaaaaattgtgcatttaatgtatcaaaaattgaagtgttaaattttttcaaataataattttttaattggaaaacct |
39804989 |
T |
|
| Q |
193 |
taaaga |
198 |
Q |
| |
|
|||||| |
|
|
| T |
39804990 |
taaaga |
39804995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 219
Target Start/End: Original strand, 49011879 - 49012012
Alignment:
| Q |
87 |
ttttaaggacttgaaatagtaaattttatggaaaa-ttatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgg |
185 |
Q |
| |
|
|||||||||||| ||||||||| |||| ||||| || |||||| |||||||| |||||||||| |||||||||||||| ||||| ||||| ||| |
|
|
| T |
49011879 |
ttttaaggactttaaatagtaagtttttgtgaaaacttgtgcatttaatgcatcgaaaattgaagtattaaacttttttaatgaatagattcttgattaa |
49011978 |
T |
|
| Q |
186 |
gaaaccttaaagaatgcccttaaatcactcgtta |
219 |
Q |
| |
|
|| ||||||||| ||| |||| |||||||||| |
|
|
| T |
49011979 |
aaatccttaaagagtgcacttaggtcactcgtta |
49012012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 28695820 - 28695735
Alignment:
| Q |
142 |
aaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
|||||||||| || |||||||||| ||||||||||| ||| | || ||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
28695820 |
aaattgaagtttttgacttttttaaaaaataatttctttattagtaatccttaaagagtgcccttagggcactcgttaacaagacc |
28695735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 227
Target Start/End: Complemental strand, 46521570 - 46521473
Alignment:
| Q |
130 |
tcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
||||||||| | |||||| ||| || ||||||||||| ||||||||| || ||| |||| ||||||||| ||| || | ||||||||||||||||| |
|
|
| T |
46521570 |
tcaatgcattaaaaattggagtttttaacttttttaaagaataatttatttattaggaatccttaaagagtgctctaagggcactcgttaacaagacc |
46521473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 7388914 - 7388783
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaa |
156 |
Q |
| |
|
|||||| ||| ||||||||| | ||||||||||| |||| | |||||||||||| ||||||| || |||||| |||||||| |||||| | ||| |
|
|
| T |
7388914 |
gaaatgctaatgagtgccctcgggacactttttaagaactttagatagtaaatttttatggaaacttgtgcatttaatgcatcggaaattggaacattag |
7388815 |
T |
|
| Q |
157 |
acttttttaaggaataatttcttaattgggaa |
188 |
Q |
| |
|
||||||| || | ||| ||||||||||||||| |
|
|
| T |
7388814 |
actttttcaatggatattttcttaattgggaa |
7388783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 40781430 - 40781496
Alignment:
| Q |
110 |
ttttatggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataattt |
176 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||||| ||| ||||||||||| || |||||||| |
|
|
| T |
40781430 |
ttttatggaaatctatgcattcaatgcatcagaaattaaagcattaaactttttcaataaataattt |
40781496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 183
Target Start/End: Original strand, 41370159 - 41370261
Alignment:
| Q |
82 |
gcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttctta |
180 |
Q |
| |
|
||||||||||||||||| |||||||| |||| ||| ||| || || | ||||||||| |||||||| | || ||||||||| || |||||||||||| |
|
|
| T |
41370159 |
gcactttttaaggactttgaatagtaagtttttatgaaaatttgtgtaatcaatgcattgaaaattgaaatatttaacttttttgagaaataatttctta |
41370258 |
T |
|
| Q |
181 |
att |
183 |
Q |
| |
|
||| |
|
|
| T |
41370259 |
att |
41370261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 23135502 - 23135570
Alignment:
| Q |
159 |
ttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
|||||||||||||||||| || ||| | || ||||||||| ||| |||| ||||||||||||||||| |
|
|
| T |
23135502 |
ttttttaaggaataatttttttattagaaatccttaaagagtgcacttaggacactcgttaacaagacc |
23135570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 47040653 - 47040701
Alignment:
| Q |
65 |
taacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt |
113 |
Q |
| |
|
|||||||||||||| | ||||| ||||||||| | |||||||||||||| |
|
|
| T |
47040653 |
taacgagtgccctaggggcactctttaaggaccttaaatagtaaatttt |
47040701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 79; Significance: 4e-37; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 58 - 203
Target Start/End: Complemental strand, 18734491 - 18734345
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaa |
156 |
Q |
| |
|
|||||||| | |||||||||||| || | | |||||||||||||||||||||||| ||| |||||| ||||||||||| ||| ||||||||||||||| |
|
|
| T |
18734491 |
gaaatgtttatgagtgccctaaggacattctctaaggacttgaaatagtaaatttttatgaaaaattgtgcattcaatgtatcggaaattgaagtgttaa |
18734392 |
T |
|
| Q |
157 |
acttttttaaggaataatttcttaattgggaaaccttaaagaatgcc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| ||| |||| |
|
|
| T |
18734391 |
acttttttaaggaataatttcttaattgagaaaccttagagagtgcc |
18734345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 198
Target Start/End: Original strand, 33962906 - 33963051
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaa----gagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtg |
152 |
Q |
| |
|
|||||||||||||||||||||| | ||||| ||||||||||| ||||| |||||||| ||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
33962906 |
gaaatgttaacgagtgccctaattatgggcactctttaaggactttaaataataaatttttatgaaaaattgtgcattcaatgcattgaaaattgaagtg |
33963005 |
T |
|
| Q |
153 |
ttaaacttttttaaggaataatttcttaattgggaaaccttaaaga |
198 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |||| ||||||| |
|
|
| T |
33963006 |
ttaaacttttttaaagaataatttcttaattggaaaactttaaaga |
33963051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 32438049 - 32438188
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaa |
156 |
Q |
| |
|
||||| ||||||||||| || | ||| | ||||||||||| |||||||||||||| |||||||||| |||||| |||||||| ||||||||||||||| |
|
|
| T |
32438049 |
gaaatattaacgagtgctcttaatgcattctttaaggactttaaatagtaaatttttatggaaaattgtgcatttaatgcatcggaaattgaagtgttaa |
32438148 |
T |
|
| Q |
157 |
acttttttaaggaataatttcttaattgggaaaccttaaa |
196 |
Q |
| |
|
|| |||| || |||||||| |||||||| |||||||||| |
|
|
| T |
32438149 |
accttttcaaataataattttttaattggaaaaccttaaa |
32438188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 37597577 - 37597460
Alignment:
| Q |
107 |
aaattttatggaaaattatgcattcaatgcatcataaattgaagtgttaaactttttt---aaggaataatttcttaattgggaaaccttaaagaatgcc |
203 |
Q |
| |
|
||||||||||| ||||| |||||| ||||||| ||||||||||| || |||||| || ||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
37597577 |
aaattttatgggaaattgtgcatttaatgcattggaaattgaagtg--aattttttttttcaaagaacaatttcttaattgggaaaccttaaagagtgcc |
37597480 |
T |
|
| Q |
204 |
cttaaatcactcgttaacaa |
223 |
Q |
| |
|
|||||| ||||||||||||| |
|
|
| T |
37597479 |
cttaaagcactcgttaacaa |
37597460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 7933403 - 7933334
Alignment:
| Q |
88 |
tttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaa |
156 |
Q |
| |
|
|||||| |||| |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
7933403 |
tttaagtactttaaatagtaaatttttatgaaaaattatgcattcaatgcatcggaaattgaagtgttaa |
7933334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 197
Target Start/End: Original strand, 9153437 - 9153581
Alignment:
| Q |
52 |
atatgagaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaattttatggaaaattatgcattcaatgcatcataaattgaagt |
151 |
Q |
| |
|
||||| |||||| |||||||||||| | |||| ||||||||| | ||||||||| |||||| ||| || || ||||||||||| |||||||||| |
|
|
| T |
9153437 |
atatgggaaatgctaacgagtgcccccggggcacactttaaggacct-aaatagtaagttttataaaaatttgtgtattcaatgcattggaaattgaagt |
9153535 |
T |
|
| Q |
152 |
gttaaacttttttaaggaataatttcttaattgggaaaccttaaag |
197 |
Q |
| |
|
||| ||||||||| |||||||||||||||| |||| |||||||| |
|
|
| T |
9153536 |
gtttgccttttttaaagaataatttcttaatttggaatccttaaag |
9153581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 200
Target Start/End: Original strand, 11580407 - 11580531
Alignment:
| Q |
77 |
taagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatt |
175 |
Q |
| |
|
|||||||||| ||||| ||||| | ||||||| |||| ||||||| | || ||||||| ||||| |||||||||| ||| |||| ||||| |||||||| |
|
|
| T |
11580407 |
taagagcactctttaaagactttagatagtaagtttttatggaaacatgtgtattcaatccatcaaaaattgaagtattagacttatttaatgaataatt |
11580506 |
T |
|
| Q |
176 |
tcttaattgggaaaccttaaagaat |
200 |
Q |
| |
|
| ||||||| ||| || |||||||| |
|
|
| T |
11580507 |
ttttaattgagaatccgtaaagaat |
11580531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 183
Target Start/End: Original strand, 32770737 - 32770863
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaa-ttttatggaaaattatgcattcaatgcatcataaattgaagtgttaa |
156 |
Q |
| |
|
|||||||||| |||||| ||||| || | ||||||||||| | |||||||| ||||||||||| |||||| ||||||||| |||||||||| |||| |
|
|
| T |
32770737 |
gaaatgttaatgagtgcgttaagaacattctttaaggactttagatagtaaaattttatggaaatttatgcggtcaatgcattcgaaattgaagtattaa |
32770836 |
T |
|
| Q |
157 |
acttttttaaggaataatttcttaatt |
183 |
Q |
| |
|
||||| || ||||||||||||||| |
|
|
| T |
32770837 |
gttttttcaataaataatttcttaatt |
32770863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 18375101 - 18375031
Alignment:
| Q |
157 |
acttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
|||||||||| |||||||||||| ||| |||| ||||||||| | |||||| |||||||||||||||| |
|
|
| T |
18375101 |
acttttttaaagaataatttctttattaggaatccttaaagagtacccttaggatactcgttaacaagacc |
18375031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 24762781 - 24762851
Alignment:
| Q |
157 |
acttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
|||||||||||||||| ||||| |||| || | ||||||||| || ||| || ||||||||||||||||| |
|
|
| T |
24762781 |
acttttttaaggaatattttctaaatttgggatccttaaagagtgacctgaaggcactcgttaacaagacc |
24762851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 163
Target Start/End: Complemental strand, 43745773 - 43745667
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaa-attttatggaaaattatgcattcaatgcatcataaattgaagtgttaa |
156 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||| || ||||||||| ||||||| ||| | |||||||||||||| |||||||| |||| | |
|
|
| T |
43745773 |
gaaatgttaacgagtgccctaagggcactctttaagagtttaaaatagtaaggttttatgaaaacgtgtgcattcaatgcattgaaaattgaaatgttta |
43745674 |
T |
|
| Q |
157 |
acttttt |
163 |
Q |
| |
|
|||||| |
|
|
| T |
43745673 |
gcttttt |
43745667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0633 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0633
Description:
Target: scaffold0633; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 97 - 227
Target Start/End: Original strand, 5010 - 5141
Alignment:
| Q |
97 |
ttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaa |
195 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
5010 |
ttgaaatagtaaatttttatggaaaattatgcattcaatgcatgggaaattgaaatgttaaacttttttaaggaataattttttaattgggaaaccttaa |
5109 |
T |
|
| Q |
196 |
agaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
| | || ||||| |||| |||||||||||| |
|
|
| T |
5110 |
aaagtgttcttaaggcacttgttaacaagacc |
5141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 56 - 198
Target Start/End: Original strand, 5495938 - 5496078
Alignment:
| Q |
56 |
gagaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaattttatggaaaattatgcattcaatgcatcataaattgaagtgtta |
155 |
Q |
| |
|
||||||| ||||||||||| |||||||||| ||||||||||| |||||||| |||||||||| || ||||||||||||||| ||||| |||||||| |
|
|
| T |
5495938 |
gagaaatactaacgagtgccttaagagcactctttaaggactttgaatagtaa--tttatggaaagttgtgcattcaatgcatcgaaaattaaagtgtta |
5496035 |
T |
|
| Q |
156 |
aacttttttaaggaataatttcttaattgggaaaccttaaaga |
198 |
Q |
| |
|
||| |||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
5496036 |
aacattttcaaggaataatttcttaattgagaaaccttaaaga |
5496078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 227
Target Start/End: Original strand, 44319823 - 44319992
Alignment:
| Q |
59 |
aaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaa |
157 |
Q |
| |
|
|||||||||||||| || |||||| | ||||||||||| ||||| |||||||| |||| ||||| |||||| |||||||| ||||| |||||||||| |
|
|
| T |
44319823 |
aaatgttaacgagtattcttagagcattatttaaggactttaaataataaatttttatgggaaattgtgcatttaatgcatcgaaaattaaagtgttaaa |
44319922 |
T |
|
| Q |
158 |
cttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
|||||| || |||||||||||||||| | |||||||||| || ||||| ||||||||||||||||| |
|
|
| T |
44319923 |
ctttttaaaaaaataatttcttaattgaaataccttaaagagtgtccttaggacactcgttaacaagacc |
44319992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 58 - 198
Target Start/End: Complemental strand, 6771976 - 6771835
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaa-ttttatggaaaattatgcattcaatgcatcataaattgaagtgttaa |
156 |
Q |
| |
|
||||||||| ||||| ||||||| |||| ||||||||||| |||||||||| |||||||||||||| |||||||||| ||| |||||||| || | | |
|
|
| T |
6771976 |
gaaatgttagcgagtaccctaaggacactctttaaggactttaaatagtaaatttttatggaaaattgtgcattcaatatatcggaaattgaaatggtga |
6771877 |
T |
|
| Q |
157 |
acttttttaaggaataatttcttaattgggaaaccttaaaga |
198 |
Q |
| |
|
||||| || ||||||||||||||||| ||||||||||||| |
|
|
| T |
6771876 |
gttttttcaaagaataatttcttaattgagaaaccttaaaga |
6771835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 26345 - 26200
Alignment:
| Q |
53 |
tatgagaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagt |
151 |
Q |
| |
|
|||| ||||| |||||||||| ||| || || | |||||| |||| ||||| |||||||| |||| ||||| | |||| |||||||| ||||| |||| |
|
|
| T |
26345 |
tatgggaaatattaacgagtgtccttaggacattctttaagaactttaaataataaatttttatgggaaattgtacatttaatgcatcgaaaattaaagt |
26246 |
T |
|
| Q |
152 |
gttaaacttttttaaggaataatttcttaattgggaaaccttaaaga |
198 |
Q |
| |
|
||||||||||| || |||||||||||||||| | |||||||||||| |
|
|
| T |
26245 |
gttaaacttttgcaaagaataatttcttaatt-gaaaaccttaaaga |
26200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 31902718 - 31902839
Alignment:
| Q |
59 |
aaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaa-ttttatggaaaattatgcattcaatgcatcataaattgaagtgttaaa |
157 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||||||| |||||||||| |||||||||||||| || | |||||| || |||||||| | || | |
|
|
| T |
31902718 |
aaatgttaacgagtgccccc-gagcactctttaaggactttaaatagtaaatttttatggaaaattgtgtagtcaatgtattgaaaattgaaatatttga |
31902816 |
T |
|
| Q |
158 |
cttttttaaggaataatttctta |
180 |
Q |
| |
|
|||| |||||||||||||||||| |
|
|
| T |
31902817 |
ctttcttaaggaataatttctta |
31902839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 227
Target Start/End: Complemental strand, 6775328 - 6775200
Alignment:
| Q |
100 |
aaatagtaaat-tttatggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaaga |
198 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||| ||||| || | | | ||||| || ||||||||| ||||||| ||||||||||||| |
|
|
| T |
6775328 |
aaatagtaaatatttatggaaaattgtgcattcaatgcatcggaaattcaaatagtgagatttttcaaagaataatttattaattgagaaaccttaaaga |
6775229 |
T |
|
| Q |
199 |
atgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
|||||| | ||||| ||||||||||| |
|
|
| T |
6775228 |
gtgccctaaggacactccttaacaagacc |
6775200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 207
Target Start/End: Complemental strand, 26638858 - 26638727
Alignment:
| Q |
77 |
taagagcactttttaaggacttgaaatagtaaattttatggaaaattatgcattc-aatgcatcataaattgaagtgttaaacttttttaaggaataatt |
175 |
Q |
| |
|
|||| ||||| |||| |||||| ||||||||| ||||||||||| | || || | ||||||||| |||||||||| |||| ||||| || ||||| | |
|
|
| T |
26638858 |
taagggcactctttatggactttaaatagtaagttttatggaaacatgtgtatncaaatgcatcaaaaattgaagtattaagttttttcaatgaatagtc |
26638759 |
T |
|
| Q |
176 |
tcttaattgggaaaccttaaagaatgccctta |
207 |
Q |
| |
|
||||||||| ||| ||||||||| |||||||| |
|
|
| T |
26638758 |
tcttaattgagaatccttaaagagtgccctta |
26638727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 227
Target Start/End: Complemental strand, 3298304 - 3298188
Alignment:
| Q |
110 |
ttttatggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaa |
209 |
Q |
| |
|
||||||||||| ||| ||||||||||||||| |||||||| | | || |||||| || ||||| ||||||||||| | | |||||||| ||||||||| |
|
|
| T |
3298304 |
ttttatggaaacttaagcattcaatgcatcagaaattgaaatatgaagctttttcaatgaatagtttcttaattgag-tatcttaaagagtgcccttaag |
3298206 |
T |
|
| Q |
210 |
tcactcgttaacaagacc |
227 |
Q |
| |
|
|||||||| ||||||| |
|
|
| T |
3298205 |
gtactcgttagcaagacc |
3298188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 26402834 - 26402899
Alignment:
| Q |
142 |
aaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaagaatgccctta |
207 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||| ||| |||| ||||||||| |||||||| |
|
|
| T |
26402834 |
aaattgaagtttttgacttttttaaggaataatttctttattaggaatccttaaagagtgccctta |
26402899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 33899805 - 33899872
Alignment:
| Q |
159 |
ttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagac |
226 |
Q |
| |
|
||||||||||||||||||||| ||| |||| | ||||||| |||||||| |||||||||||||||| |
|
|
| T |
33899805 |
ttttttaaggaataatttctttattaggaatctttaaagagtgcccttactacactcgttaacaagac |
33899872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 5248685 - 5248770
Alignment:
| Q |
142 |
aaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
|||||| ||| || ||| ||||||| |||||||||||| ||| |||| ||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
5248685 |
aaattggagtttttaacatttttaaagaataatttctttattaggaatccttaaagagtgcccttaaggggctcgttaacaagacc |
5248770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 47405270 - 47405363
Alignment:
| Q |
130 |
tcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaa |
223 |
Q |
| |
|
||||||||| | |||||||||| || || ||||||| ||||||||| || ||| |||| ||||||||| |||||| || ||||||||||||| |
|
|
| T |
47405270 |
tcaatgcattagaaattgaagtttttgacctttttaatgaataatttatttattaggaatccttaaagagtgccctcaaggcactcgttaacaa |
47405363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 11914849 - 11914900
Alignment:
| Q |
62 |
tgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt |
113 |
Q |
| |
|
|||||||||||| |||||||||||| ||||||||||| | ||||||| |||| |
|
|
| T |
11914849 |
tgttaacgagtgtcctaagagcactctttaaggactttagatagtaagtttt |
11914900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 22739472 - 22739572
Alignment:
| Q |
127 |
cattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagac |
226 |
Q |
| |
|
||||||||||||| ||||||| || | | | ||||||| |||||||||||||||| || ||||||| ||| |||||| |||||||||||||||| |
|
|
| T |
22739472 |
cattcaatgcatcgaaaattgatgtatcagatatttttaataaataatttcttaattgaaaatccttaaaaaatattcttaaaacactcgttaacaagac |
22739571 |
T |
|
| Q |
227 |
c |
227 |
Q |
| |
|
| |
|
|
| T |
22739572 |
c |
22739572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0027 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0027
Description:
Target: scaffold0027; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 58 - 207
Target Start/End: Original strand, 122432 - 122582
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaa |
156 |
Q |
| |
|
|||||||||||||||||| | || ||| | |||||||| || || |||||| |||| |||||||||| |||||| |||||||| ||||| ||||||||| |
|
|
| T |
122432 |
gaaatgttaacgagtgcctttagggcattctttaaggattttaagtagtaattttttatggaaaattgtgcatttaatgcatcggaaattaaagtgttaa |
122531 |
T |
|
| Q |
157 |
acttttttaaggaataatttcttaattgggaaaccttaaagaatgccctta |
207 |
Q |
| |
|
||||||| || ||||||||||||||||| |||| |||||||| |||||||| |
|
|
| T |
122532 |
actttttcaaagaataatttcttaattgagaaatcttaaagagtgccctta |
122582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 29988315 - 29988435
Alignment:
| Q |
77 |
taagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatt |
175 |
Q |
| |
|
||||| |||| ||||||||||| |||||||||||||| |||||||||| |||||||| ||||| |||||||| | || |||||||||| |||||||| |
|
|
| T |
29988315 |
taagaacactctttaaggactttaaatagtaaatttttatggaaaattgaacattcaatacatcaaaaattgaaat--tatacttttttaaagaataatt |
29988412 |
T |
|
| Q |
176 |
tcttaattgggaaaccttaaaga |
198 |
Q |
| |
|
||||||||| ||||||||||||| |
|
|
| T |
29988413 |
tcttaattgagaaaccttaaaga |
29988435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 227
Target Start/End: Complemental strand, 29408069 - 29407972
Alignment:
| Q |
130 |
tcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaagacc |
227 |
Q |
| |
|
||||||||| | |||||| ||| || |||||||||| |||||||||||| ||| |||| ||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
29408069 |
tcaatgcattagaaattggagtttttgacttttttaaagaataatttctttattaggaatccttaaagagtgcccttaaggcactcgttaacaagacc |
29407972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 34530349 - 34530426
Alignment:
| Q |
58 |
gaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagta-aattttatggaaaattatgcattcaat |
134 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||| |||| |||||||| |||||||||||||| | |||||||| |
|
|
| T |
34530349 |
gaaatgttaacgagtgccctaagagcattctttaagcactttaaatagtatgtttttatggaaaattgtacattcaat |
34530426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 10570908 - 10571059
Alignment:
| Q |
57 |
agaaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgtta |
155 |
Q |
| |
|
||||||| |||||| || | |||| |||| ||||| ||||| | ||||||||||| || |||| || | |||||||||||||| |||||||||| || |
|
|
| T |
10570908 |
agaaatgctaacgaatgtcataaggacactctttaaagactttatttagtaaatttttatagaaatttgttcattcaatgcatcaaaaattgaagtattg |
10571007 |
T |
|
| Q |
156 |
aacttttttaaggaataatttcttaattgggaaaccttaaagaatgccctta |
207 |
Q |
| |
|
||| |||| || ||||| |||||||||| ||| ||||||||| || ||||| |
|
|
| T |
10571008 |
aacattttcaatgaatagtttcttaattaagaatccttaaagagtgtcctta |
10571059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 5678482 - 5678579
Alignment:
| Q |
102 |
atagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaaga |
198 |
Q |
| |
|
|||||||||||| || |||| |||| |||||||| || |||||||||| |||||||||||||| |||||||||||||| | ||| ||||||||| |
|
|
| T |
5678482 |
atagtaaatttttatagaaatttatatattcaatgtattgaaaattgaagtattaaacttttttaatgaataatttcttaactatgaatccttaaaga |
5678579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 1252792 - 1252754
Alignment:
| Q |
124 |
atgcattcaatgcatcataaattgaagtgttaaactttt |
162 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
1252792 |
atgcattcaatgcatcataaattgaagtattagactttt |
1252754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 32254194 - 32254250
Alignment:
| Q |
142 |
aaattgaagtgttaaacttttttaaggaataatttcttaattgggaaaccttaaaga |
198 |
Q |
| |
|
||||||||| | |||||||||||| ||||| |||||||||| |||| ||||||||| |
|
|
| T |
32254194 |
aaattgaagaatgaaacttttttaatgaatagtttcttaattaggaatccttaaaga |
32254250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0172 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0172
Description:
Target: scaffold0172; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 207
Target Start/End: Complemental strand, 13603 - 13454
Alignment:
| Q |
59 |
aaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaaatttt-atggaaaattatgcattcaatgcatcataaattgaagtgttaaa |
157 |
Q |
| |
|
||||| ||||||||||| |||| ||||| ||||| ||||||| |||||| |||| ||||||| || ||||||||| ||||| |||||||||| ||| | |
|
|
| T |
13603 |
aaatgctaacgagtgccttaagggcactctttaaagacttgagatagtaggtttttatggaaacttgtgcattcaaagcatcggaaattgaagtattaga |
13504 |
T |
|
| Q |
158 |
cttttttaaggaataatttcttaattgggaaaccttaaagaatgccctta |
207 |
Q |
| |
|
|||||| || ||||| |||||||||| |||| | ||||||| |||||||| |
|
|
| T |
13503 |
ctttttcaatgaatagtttcttaattaggaatctttaaagagtgccctta |
13454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0036
Description:
Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 21335 - 21274
Alignment:
| Q |
162 |
tttaaggaataatttcttaattgggaaaccttaaagaatgcccttaaatcactcgttaacaa |
223 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| || | ||| ||||||||||||| |
|
|
| T |
21335 |
tttaaggaataatttcttaattggaaaaccttaaagagtgtcattaggacactcgttaacaa |
21274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 20289 - 20184
Alignment:
| Q |
59 |
aaatgttaacgagtgccctaagagcactttttaaggacttgaaatagtaa-attttatggaaaattatgcattcaatgcatcataaattgaagtgttaaa |
157 |
Q |
| |
|
|||| |||||||||||||| || ||||| |||| || || ||||||||| |||||||| ||| | |||||||||||||| |||||||| |||| || |
|
|
| T |
20289 |
aaattttaacgagtgcccttagggcactctttatgggtttaaaatagtaatattttatgaaaatgtgtgcattcaatgcatttgaaattgaaatgtttaa |
20190 |
T |
|
| Q |
158 |
cttttt |
163 |
Q |
| |
|
|||||| |
|
|
| T |
20189 |
cttttt |
20184 |
T |
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