View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16796_high_24 (Length: 301)

Name: NF16796_high_24
Description: NF16796
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16796_high_24
NF16796_high_24
[»] chr5 (43 HSPs)
chr5 (1-301)||(38473588-38473888)
chr5 (3-89)||(5975751-5975837)
chr5 (12-67)||(32521703-32521758)
chr5 (4-75)||(42980745-42980816)
chr5 (3-89)||(224625-224711)
chr5 (9-75)||(5061037-5061103)
chr5 (1-67)||(7345423-7345489)
chr5 (9-75)||(15509204-15509270)
chr5 (1-67)||(15613522-15613588)
chr5 (1-79)||(19827173-19827251)
chr5 (11-86)||(1273383-1273458)
chr5 (3-86)||(12933749-12933832)
chr5 (8-91)||(19523976-19524059)
chr5 (1-79)||(1273094-1273172)
chr5 (9-75)||(4568015-4568081)
chr5 (9-75)||(5062227-5062293)
chr5 (1-79)||(5382947-5383025)
chr5 (9-79)||(12936143-12936213)
chr5 (1-75)||(15614993-15615067)
chr5 (1-79)||(18677981-18678059)
chr5 (1-75)||(21387646-21387720)
chr5 (1-75)||(27894056-27894130)
chr5 (3-86)||(12947910-12947993)
chr5 (3-79)||(19525323-19525399)
chr5 (9-79)||(12950301-12950371)
chr5 (9-75)||(15510304-15510370)
chr5 (1-75)||(18693707-18693781)
chr5 (9-75)||(32521963-32522029)
chr5 (9-66)||(22650669-22650726)
chr5 (32-89)||(33362631-33362688)
chr5 (7-75)||(20988699-20988767)
chr5 (9-61)||(42979471-42979523)
chr5 (40-79)||(24805296-24805335)
chr5 (9-75)||(4566960-4567026)
chr5 (9-75)||(15153886-15153952)
chr5 (9-75)||(19050758-19050824)
chr5 (1-86)||(8762433-8762518)
chr5 (1-89)||(10085878-10085966)
chr5 (3-75)||(1982721-1982793)
chr5 (3-75)||(12952769-12952841)
chr5 (3-75)||(28236928-28237000)
chr5 (3-75)||(37371066-37371138)
chr5 (19-79)||(41905180-41905240)
[»] chr7 (58 HSPs)
chr7 (1-75)||(43935194-43935268)
chr7 (3-91)||(41516379-41516467)
chr7 (9-75)||(7347261-7347327)
chr7 (3-79)||(19278358-19278434)
chr7 (10-91)||(22060456-22060537)
chr7 (3-75)||(43936175-43936247)
chr7 (13-75)||(13446388-13446450)
chr7 (1-75)||(18801224-18801298)
chr7 (1-75)||(19848867-19848941)
chr7 (9-75)||(38002555-38002621)
chr7 (9-75)||(41126248-41126314)
chr7 (9-75)||(41618540-41618606)
chr7 (3-75)||(17288255-17288327)
chr7 (9-76)||(33341306-33341373)
chr7 (3-79)||(33459578-33459654)
chr7 (1-76)||(48672808-48672883)
chr7 (9-75)||(1884249-1884315)
chr7 (1-79)||(1970818-1970896)
chr7 (1-79)||(4858377-4858455)
chr7 (1-79)||(13446691-13446769)
chr7 (1-79)||(18802422-18802500)
chr7 (1-75)||(19279645-19279719)
chr7 (9-67)||(34557414-34557472)
chr7 (9-75)||(36673877-36673943)
chr7 (1-75)||(36702786-36702860)
chr7 (9-75)||(41616633-41616699)
chr7 (1-67)||(47163170-47163236)
chr7 (10-67)||(45721808-45721865)
chr7 (1-92)||(25153650-25153741)
chr7 (3-86)||(43007684-43007767)
chr7 (13-65)||(48754015-48754067)
chr7 (9-92)||(40926560-40926643)
chr7 (9-75)||(1885282-1885348)
chr7 (9-75)||(30222655-30222721)
chr7 (9-75)||(30224017-30224083)
chr7 (9-75)||(34558342-34558408)
chr7 (9-75)||(38001513-38001579)
chr7 (9-86)||(38408315-38408392)
chr7 (9-79)||(43006390-43006460)
chr7 (14-79)||(33458315-33458380)
chr7 (1-89)||(22746353-22746441)
chr7 (3-79)||(28325078-28325153)
chr7 (3-66)||(24873632-24873695)
chr7 (1-79)||(36702983-36703062)
chr7 (3-86)||(41514996-41515077)
chr7 (12-75)||(48755592-48755655)
chr7 (9-67)||(2903061-2903119)
chr7 (9-75)||(7345923-7345989)
chr7 (9-75)||(18670544-18670610)
chr7 (9-75)||(21171527-21171593)
chr7 (1-79)||(25154969-25155047)
chr7 (55-89)||(32894884-32894918)
chr7 (13-75)||(35480217-35480278)
chr7 (9-67)||(41127212-41127270)
chr7 (3-67)||(8439783-8439847)
chr7 (3-75)||(33228856-33228928)
chr7 (3-75)||(37373543-37373615)
chr7 (39-79)||(44114726-44114766)
[»] chr4 (61 HSPs)
chr4 (3-79)||(31711097-31711173)
chr4 (7-75)||(15445445-15445513)
chr4 (3-90)||(1273468-1273554)
chr4 (1-75)||(15446703-15446777)
chr4 (9-75)||(26791466-26791531)
chr4 (1-79)||(33376223-33376301)
chr4 (3-89)||(38553924-38554010)
chr4 (3-76)||(40143662-40143735)
chr4 (3-79)||(28103521-28103597)
chr4 (3-79)||(40146658-40146734)
chr4 (3-75)||(47667188-47667259)
chr4 (3-94)||(11115015-11115106)
chr4 (9-75)||(19049913-19049979)
chr4 (4-86)||(21104346-21104428)
chr4 (1-79)||(27408768-27408846)
chr4 (1-79)||(37560332-37560410)
chr4 (3-91)||(26393162-26393250)
chr4 (3-75)||(46796061-46796133)
chr4 (1-76)||(30682728-30682803)
chr4 (1-79)||(33377397-33377475)
chr4 (1-79)||(86808-86886)
chr4 (1-79)||(10403450-10403527)
chr4 (9-75)||(12396915-12396981)
chr4 (9-75)||(29833381-29833447)
chr4 (9-67)||(53400202-53400260)
chr4 (3-79)||(11113747-11113823)
chr4 (7-75)||(30671003-30671071)
chr4 (9-89)||(52881971-52882051)
chr4 (9-92)||(28370682-28370765)
chr4 (1-76)||(35787804-35787879)
chr4 (9-75)||(23752025-23752091)
chr4 (9-75)||(48207758-48207824)
chr4 (9-75)||(53401492-53401558)
chr4 (2-79)||(37559003-37559080)
chr4 (1-65)||(10403298-10403362)
chr4 (3-79)||(15786957-15787033)
chr4 (3-67)||(15787537-15787601)
chr4 (1-92)||(30683060-30683151)
chr4 (9-89)||(38555317-38555397)
chr4 (3-50)||(3528224-3528271)
chr4 (16-79)||(39590946-39591009)
chr4 (12-75)||(48206169-48206232)
chr4 (9-67)||(52880830-52880889)
chr4 (9-75)||(526760-526826)
chr4 (13-75)||(937143-937205)
chr4 (9-75)||(2310823-2310889)
chr4 (9-79)||(6616252-6616322)
chr4 (9-75)||(30672105-30672171)
chr4 (9-99)||(39592330-39592420)
chr4 (1-75)||(44302729-44302803)
chr4 (13-75)||(44690900-44690962)
chr4 (9-75)||(56001309-56001375)
chr4 (3-80)||(55952830-55952906)
chr4 (3-72)||(56297714-56297783)
chr4 (12-75)||(2309853-2309916)
chr4 (3-75)||(26202421-26202493)
chr4 (3-75)||(38370291-38370363)
chr4 (3-67)||(43894122-43894186)
chr4 (19-75)||(43895648-43895704)
chr4 (39-75)||(44655730-44655766)
chr4 (39-75)||(44664397-44664433)
[»] chr3 (68 HSPs)
chr3 (3-79)||(43101899-43101975)
chr3 (3-92)||(26798941-26799030)
chr3 (7-67)||(39190763-39190823)
chr3 (1-86)||(8372649-8372734)
chr3 (3-79)||(54654001-54654077)
chr3 (9-75)||(7822027-7822093)
chr3 (1-79)||(10987686-10987764)
chr3 (5-75)||(11219439-11219509)
chr3 (1-75)||(29536723-29536797)
chr3 (1-75)||(32979097-32979171)
chr3 (1-67)||(47808139-47808205)
chr3 (9-75)||(53049078-53049144)
chr3 (9-90)||(39133011-39133092)
chr3 (9-74)||(39287480-39287545)
chr3 (1-86)||(51825654-51825739)
chr3 (7-67)||(48034026-48034086)
chr3 (3-75)||(48252942-48253014)
chr3 (3-86)||(49122037-49122120)
chr3 (1-75)||(7820399-7820473)
chr3 (9-75)||(11220699-11220765)
chr3 (9-75)||(19579229-19579295)
chr3 (9-75)||(32973148-32973214)
chr3 (9-75)||(32974264-32974330)
chr3 (9-75)||(39288480-39288546)
chr3 (13-75)||(40502260-40502322)
chr3 (9-75)||(47855379-47855445)
chr3 (9-75)||(48035365-48035431)
chr3 (9-75)||(48825821-48825887)
chr3 (1-86)||(51824124-51824209)
chr3 (9-75)||(52293564-52293630)
chr3 (9-75)||(53047906-53047972)
chr3 (2-79)||(41387467-41387544)
chr3 (7-75)||(7583479-7583547)
chr3 (9-97)||(17350143-17350231)
chr3 (1-73)||(51401384-51401456)
chr3 (7-75)||(53347038-53347105)
chr3 (12-75)||(33563958-33564021)
chr3 (12-75)||(35633236-35633299)
chr3 (1-79)||(42633919-42633997)
chr3 (12-67)||(47806835-47806890)
chr3 (9-75)||(1301041-1301107)
chr3 (9-75)||(5416207-5416273)
chr3 (1-79)||(8371225-8371303)
chr3 (9-75)||(19579335-19579401)
chr3 (1-79)||(19622010-19622088)
chr3 (1-75)||(41386139-41386213)
chr3 (1-79)||(42632711-42632789)
chr3 (9-75)||(46446378-46446444)
chr3 (1-75)||(51400224-51400298)
chr3 (13-75)||(52292603-52292665)
chr3 (9-67)||(53342733-53342791)
chr3 (13-75)||(55015662-55015724)
chr3 (9-75)||(55443591-55443657)
chr3 (7-75)||(2225063-2225131)
chr3 (7-75)||(11483026-11483094)
chr3 (1-72)||(13077984-13078055)
chr3 (3-75)||(30431384-30431456)
chr3 (3-86)||(30838505-30838588)
chr3 (3-66)||(47766986-47767048)
chr3 (9-64)||(52705349-52705404)
chr3 (12-67)||(55442611-55442666)
chr3 (17-75)||(5417097-5417155)
chr3 (25-75)||(47854519-47854569)
chr3 (1-79)||(53808323-53808401)
chr3 (9-79)||(54752621-54752691)
chr3 (1-65)||(19253035-19253099)
chr3 (3-75)||(51214201-51214273)
chr3 (3-79)||(53809528-53809604)
[»] scaffold0369 (1 HSPs)
scaffold0369 (1-86)||(12908-12993)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-89)||(48489-48577)
scaffold0003 (1-79)||(47075-47153)
[»] chr6 (28 HSPs)
chr6 (1-89)||(27438785-27438873)
chr6 (7-75)||(13173046-13173114)
chr6 (7-75)||(19368557-19368625)
chr6 (10-75)||(26584079-26584144)
chr6 (2-73)||(9927617-9927688)
chr6 (13-75)||(2138682-2138744)
chr6 (9-67)||(18773671-18773729)
chr6 (9-75)||(26581962-26582028)
chr6 (1-93)||(34084167-34084257)
chr6 (1-76)||(8412349-8412424)
chr6 (9-79)||(5311284-5311354)
chr6 (9-67)||(8447238-8447296)
chr6 (9-67)||(8456042-8456100)
chr6 (1-67)||(22299936-22300002)
chr6 (9-75)||(28225433-28225499)
chr6 (1-79)||(33802050-33802128)
chr6 (3-75)||(22298613-22298685)
chr6 (3-75)||(31738372-31738444)
chr6 (1-67)||(8411103-8411169)
chr6 (9-79)||(18139528-18139598)
chr6 (9-67)||(19367734-19367792)
chr6 (1-79)||(27440208-27440286)
chr6 (12-66)||(28226462-28226516)
chr6 (1-75)||(31740305-31740379)
chr6 (3-91)||(293675-293764)
chr6 (3-67)||(12203306-12203370)
chr6 (8-76)||(13176373-13176441)
chr6 (3-75)||(17916504-17916576)
[»] chr1 (63 HSPs)
chr1 (7-75)||(13568484-13568552)
chr1 (1-79)||(25787197-25787275)
chr1 (1-75)||(26056180-26056254)
chr1 (16-86)||(52741486-52741556)
chr1 (3-79)||(13930710-13930786)
chr1 (1-89)||(49139796-49139884)
chr1 (3-75)||(50679856-50679928)
chr1 (7-75)||(51424260-51424328)
chr1 (7-94)||(34531653-34531740)
chr1 (9-75)||(1061337-1061403)
chr1 (9-75)||(20953297-20953363)
chr1 (1-79)||(25785973-25786051)
chr1 (9-75)||(33941326-33941392)
chr1 (1-79)||(48467266-48467344)
chr1 (3-76)||(3979348-3979421)
chr1 (3-79)||(3978049-3978125)
chr1 (9-73)||(9119813-9119877)
chr1 (3-79)||(14071238-14071314)
chr1 (9-76)||(14312783-14312850)
chr1 (9-75)||(2236822-2236888)
chr1 (1-75)||(14390267-14390341)
chr1 (9-75)||(35683064-35683130)
chr1 (1-79)||(47411481-47411559)
chr1 (9-75)||(48974447-48974513)
chr1 (3-67)||(40135372-40135436)
chr1 (3-75)||(47512119-47512191)
chr1 (12-67)||(1873898-1873953)
chr1 (9-88)||(2973049-2973128)
chr1 (1-76)||(21277002-21277077)
chr1 (1-76)||(52181338-52181413)
chr1 (9-75)||(1061493-1061559)
chr1 (9-75)||(1898013-1898079)
chr1 (9-75)||(2238019-2238085)
chr1 (13-75)||(13567175-13567237)
chr1 (1-67)||(13641274-13641340)
chr1 (9-79)||(13929300-13929370)
chr1 (9-75)||(34532743-34532809)
chr1 (9-67)||(48934258-48934316)
chr1 (9-67)||(48935151-48935209)
chr1 (11-75)||(9123442-9123506)
chr1 (3-75)||(13642592-13642664)
chr1 (1-65)||(26054916-26054980)
chr1 (3-75)||(32823467-32823539)
chr1 (16-96)||(33793767-33793847)
chr1 (9-73)||(44340104-44340168)
chr1 (1-76)||(47410992-47411067)
chr1 (10-89)||(9633770-9633849)
chr1 (3-66)||(32823576-32823639)
chr1 (12-75)||(42244513-42244576)
chr1 (9-64)||(42248346-42248401)
chr1 (9-67)||(16217457-16217515)
chr1 (9-75)||(35684244-35684309)
chr1 (1-79)||(47136720-47136798)
chr1 (3-67)||(2971715-2971780)
chr1 (9-89)||(29264867-29264946)
chr1 (3-76)||(39193589-39193662)
chr1 (3-75)||(20171197-20171269)
chr1 (3-75)||(27114692-27114764)
chr1 (3-75)||(28309771-28309843)
chr1 (7-75)||(31859600-31859667)
chr1 (39-75)||(33850311-33850347)
chr1 (39-75)||(33943631-33943667)
chr1 (3-75)||(47511376-47511448)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-76)||(39934-40009)
[»] chr8 (43 HSPs)
chr8 (1-96)||(41867949-41868044)
chr8 (3-79)||(43275755-43275831)
chr8 (1-79)||(14820198-14820276)
chr8 (3-96)||(7796842-7796935)
chr8 (1-66)||(37274905-37274970)
chr8 (3-75)||(24068339-24068411)
chr8 (3-79)||(37472408-37472484)
chr8 (1-79)||(38591040-38591118)
chr8 (9-67)||(6843772-6843830)
chr8 (9-75)||(6844614-6844680)
chr8 (9-75)||(21267173-21267239)
chr8 (1-79)||(29739676-29739754)
chr8 (1-79)||(31623911-31623989)
chr8 (1-67)||(31625417-31625483)
chr8 (1-79)||(36756069-36756147)
chr8 (1-79)||(38589826-38589903)
chr8 (1-86)||(16363845-16363930)
chr8 (3-67)||(7816123-7816187)
chr8 (3-75)||(19913501-19913573)
chr8 (3-75)||(39515208-39515280)
chr8 (39-86)||(8395022-8395069)
chr8 (9-91)||(10052097-10052179)
chr8 (12-75)||(45385838-45385901)
chr8 (1-79)||(36940066-36940144)
chr8 (1-79)||(37323353-37323431)
chr8 (1-67)||(37324721-37324787)
chr8 (9-86)||(43277962-43278039)
chr8 (3-75)||(37994-38066)
chr8 (3-75)||(24069481-24069553)
chr8 (3-79)||(43386737-43386813)
chr8 (3-86)||(4675750-4675833)
chr8 (1-75)||(35943916-35943991)
chr8 (1-67)||(117065-117131)
chr8 (1-75)||(3237427-3237500)
chr8 (13-79)||(4810169-4810234)
chr8 (10-67)||(7815060-7815117)
chr8 (9-75)||(13360362-13360428)
chr8 (13-75)||(29441625-29441687)
chr8 (1-79)||(36070183-36070261)
chr8 (1-67)||(39546710-39546776)
chr8 (3-75)||(3612618-3612690)
chr8 (3-67)||(7770932-7770996)
chr8 (3-75)||(15989013-15989085)
[»] scaffold0025 (2 HSPs)
scaffold0025 (9-79)||(56741-56811)
scaffold0025 (1-79)||(54596-54674)
[»] chr2 (50 HSPs)
chr2 (1-75)||(12854137-12854211)
chr2 (7-75)||(10477351-10477419)
chr2 (3-79)||(7038367-7038443)
chr2 (9-75)||(3254865-3254931)
chr2 (1-75)||(6706935-6707009)
chr2 (1-75)||(12852895-12852969)
chr2 (13-75)||(33837800-33837862)
chr2 (1-86)||(12958415-12958499)
chr2 (7-67)||(4630123-4630183)
chr2 (9-75)||(5564068-5564134)
chr2 (9-75)||(5565186-5565252)
chr2 (3-76)||(42368343-42368415)
chr2 (1-65)||(2583579-2583643)
chr2 (3-79)||(42028993-42029069)
chr2 (9-76)||(3666309-3666376)
chr2 (12-67)||(4628899-4628954)
chr2 (3-66)||(6209099-6209162)
chr2 (1-79)||(23177678-23177757)
chr2 (1-79)||(23588935-23589014)
chr2 (3-86)||(34039261-34039344)
chr2 (1-75)||(42027202-42027276)
chr2 (9-67)||(1625017-1625074)
chr2 (9-67)||(2305557-2305615)
chr2 (9-75)||(3665233-3665299)
chr2 (9-75)||(15268390-15268456)
chr2 (9-67)||(33836786-33836844)
chr2 (9-79)||(37867761-37867831)
chr2 (7-67)||(3255917-3255977)
chr2 (3-75)||(27264608-27264680)
chr2 (3-67)||(35799529-35799593)
chr2 (7-75)||(41312509-41312577)
chr2 (12-75)||(41313311-41313374)
chr2 (9-79)||(41795993-41796063)
chr2 (9-75)||(2306702-2306767)
chr2 (1-79)||(2581808-2581886)
chr2 (9-75)||(14482132-14482198)
chr2 (9-75)||(17179069-17179135)
chr2 (16-86)||(21010542-21010612)
chr2 (1-79)||(23178915-23178993)
chr2 (1-79)||(23590172-23590250)
chr2 (9-75)||(29424653-29424719)
chr2 (1-89)||(10368418-10368506)
chr2 (14-75)||(14573854-14573915)
chr2 (3-75)||(37869075-37869147)
chr2 (3-79)||(7036971-7037047)
chr2 (2-66)||(11386642-11386706)
chr2 (1-89)||(15650436-15650524)
chr2 (3-75)||(15816701-15816773)
chr2 (3-75)||(42246600-42246672)
chr2 (3-75)||(43015548-43015620)
[»] scaffold0155 (1 HSPs)
scaffold0155 (8-75)||(5178-5245)
[»] scaffold0177 (1 HSPs)
scaffold0177 (9-75)||(1764-1830)
[»] scaffold0178 (2 HSPs)
scaffold0178 (3-75)||(2300-2372)
scaffold0178 (9-67)||(1229-1286)
[»] scaffold1974 (1 HSPs)
scaffold1974 (1-79)||(661-739)
[»] scaffold1878 (1 HSPs)
scaffold1878 (1-79)||(535-613)
[»] scaffold0290 (2 HSPs)
scaffold0290 (1-79)||(9511-9589)
scaffold0290 (1-79)||(8384-8462)
[»] scaffold0038 (2 HSPs)
scaffold0038 (9-75)||(25931-25997)
scaffold0038 (12-66)||(26960-27014)
[»] scaffold1827 (1 HSPs)
scaffold1827 (9-66)||(1100-1156)
[»] scaffold0046 (2 HSPs)
scaffold0046 (3-79)||(23411-23487)
scaffold0046 (9-75)||(24856-24922)
[»] scaffold0002 (1 HSPs)
scaffold0002 (9-61)||(458501-458553)
[»] scaffold0045 (2 HSPs)
scaffold0045 (16-67)||(75762-75813)
scaffold0045 (1-79)||(77214-77292)
[»] scaffold2127 (1 HSPs)
scaffold2127 (1-79)||(548-626)
[»] scaffold0687 (1 HSPs)
scaffold0687 (10-67)||(6606-6663)
[»] scaffold0630 (1 HSPs)
scaffold0630 (9-75)||(2019-2085)
[»] scaffold0064 (1 HSPs)
scaffold0064 (9-75)||(20623-20689)
[»] scaffold0839 (1 HSPs)
scaffold0839 (3-76)||(160-233)


Alignment Details
Target: chr5 (Bit Score: 194; Significance: 1e-105; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 38473588 - 38473888
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaa-taagttaagagaccaaatgatacattaaaccaattattaaa 99  Q
    ||||||| ||||||||| |||||||||| | |||||  |||||||| ||||||||||| ||| ||||  |||||||| ||| ||||||||||||||||||    
T  38473588 atttatgggaccaaattaagacactttacagttagatgaccaaaatgaaatctaaaaagtaaattaaaggaccaaataatatattaaaccaattattaaa 38473687  T
Q  100 ctcaattattgtcatccgacacaacaacatgatcaccgtccttacgaatgtgtagacgtgacaacccaaaatctaattttacacactaacatctgcacat 199  Q
    |||||||| |||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||| ||  ||| ||||||||||| ||    
T  38473688 ctcaattagtgtcatccaacacaacaacatgatcaccgttcttatgaatgtgtagatgtgacaacccaaaatctaatattt-acattaacatctgcatat 38473786  T
Q  200 caataagaaacggagccatgtcattgagacagtgatagacacatctccatgtatatacttggaagaacatcgtgatgttatatatatagaataactccac 299  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38473787 caataaggaacggagccatgtcattgagacagtgatagacacatctccatgtatatacttggaagaacatcgtgatgttatatatatagaataacaccac 38473886  T
Q  300 ct 301  Q
    ||    
T  38473887 ct 38473888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 5975837 - 5975751
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaacc 89  Q
    ||||||||||||||||||||||||||||||||| | |||||||| |||   |||||||||||||  |||||||||||  ||||||||    
T  5975837 ttatgagaccaaattgagacactttataattaggggaccaaaattaaaataaaaaataagttaaaggaccaaatgatgtattaaacc 5975751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 32521758 - 32521703
Alignment:
Q  12 caaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||||||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  32521758 caaattgagacactttatagttaggggaccaaaataaaatctaaaaataagttaag 32521703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 42980745 - 42980816
Alignment:
Q  4 tatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||||||||||| ||| || |||||||| |||||||||||||| |||| ||| ||||    
T  42980745 tatgagaccaaattgagacactttatagttataggaccaaaatgaaatctaaaaataaattaaaagatcaaa 42980816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 224625 - 224711
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaacc 89  Q
    |||||||||||||||||||||||||||| |||| | |||||||| ||| |  ||||||||||||| ||||| |||||  ||||||||    
T  224625 ttatgagaccaaattgagacactttatagttaggggaccaaaatgaaaacataaaataagttaagggaccagatgatgtattaaacc 224711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 5061103 - 5061037
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||||| ||||| | |||||||| ||||| |||||||||||||| |||||||    
T  5061103 gaccaaattgagacactttatcattaggggaccaaaatgaaatccaaaaataagttaagggaccaaa 5061037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7345423 - 7345489
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||| ||||  ||||||||||||||    
T  7345423 atttatgggaccaaattgagacactttatagttagaggaccaaaatgaaattcaaaaataagttaag 7345489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 15509270 - 15509204
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | ||||||||||||||  ||||||||||||| |||||||    
T  15509270 gaccaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaagggaccaaa 15509204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15613588 - 15613522
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||||| |||||||||||||||||||||| |||||  |||||||| ||||| ||||||||||||||    
T  15613588 atttatgggaccaaattgagacactttatagttagaagaccaaaatgaaatccaaaaataagttaag 15613522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19827173 - 19827251
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||||||||||||||||||||||||||  | |||||| | ||| | |||||||||||||||||| |||||||    
T  19827173 atttatgggaccaaattgagacactttataattatgggaccaaattgaaaaccaaaaataagttaagagactaaatgat 19827251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 1273383 - 1273458
Alignment:
Q  11 ccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    ||||||||||||||||||||||||  | |||||||| ||| | |||||||||||||| ||||||| |||| |||||    
T  1273383 ccaaattgagacactttataattaagggaccaaaatgaaaaccaaaaataagttaagggaccaaacgatatattaa 1273458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 12933832 - 12933749
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    |||||||| ||||||||||||||||||| |||| | | |||||| ||| | |||||||||||||| ||| |||||||| |||||    
T  12933832 ttatgagatcaaattgagacactttatagttaggggatcaaaatgaaaaccaaaaataagttaagggactaaatgatatattaa 12933749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 19524059 - 19523976
Alignment:
Q  8 agaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaaccaa 91  Q
    ||||||||||||||||||||||| |||  | |||||| | ||| | |||||||||||||| |||||||||||| ||||| ||||    
T  19524059 agaccaaattgagacactttatagttaagggaccaaattgaaaaccaaaaataagttaagggaccaaatgatatattaagccaa 19523976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 1273172 - 1273094
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||||||||||||||| |||||| ||| || |||||||| ||| | |||||||| ||||| |||||||||||    
T  1273172 atttatgggaccaaattgagacattttatagttaaaggaccaaaatgaaaaccaaaaataaattaagggaccaaatgat 1273094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 4568015 - 4568081
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  ||||||||||||| |||||||    
T  4568015 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 4568081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 5062227 - 5062293
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||||| ||||| | |||||||| ||||  |||||||||||||| |||||||    
T  5062227 gaccaaattgagacactttatcattaggggaccaaaatgaaattcaaaaataagttaagggaccaaa 5062293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 5383025 - 5382947
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||||||||||||||||||||||||   ||||||   ||| | |||||||||||||| |||||||||||    
T  5383025 atttatgggaccaaattgagacactttataattaggagaccaaatagaaaaccaaaaataagttaagggaccaaatgat 5382947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 12936143 - 12936213
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||||||||||||||||||| |||| | |||||||| ||| | |||||||||||||| ||| |||||||    
T  12936143 gaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagggactaaatgat 12936213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 15614993 - 15615067
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||  ||||||||||||||||||||| |||| | |||||||| ||||| ||||||||| |||| |||||||    
T  15614993 atttatggaaccaaattgagacactttatagttagcggaccaaaatgaaatccaaaaataagataagggaccaaa 15615067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 18678059 - 18677981
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||||||||||||||||||| |||| | | |||| | ||| | |||||||||||||| |||||||||||    
T  18678059 atttatgggaccaaattgagacactttatagttaggggatcaaagtgaaaaccaaaaataagttaagggaccaaatgat 18677981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 21387720 - 21387646
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| ||||||||||||||| |||||| |||| | |||||||| ||||  |||||||||||||| |||||||    
T  21387720 atttatgggaccaaattgagacattttatagttaggggaccaaaatgaaattcaaaaataagttaagggaccaaa 21387646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 27894056 - 27894130
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||| |||||||||| |||| | |||||| | ||| | |||||||||||||| |||||||    
T  27894056 atttatgagaccaaattgaaacactttatagttaggggaccaaagtgaaaacaaaaaataagttaagcgaccaaa 27894130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 12947993 - 12947910
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    |||||||| ||||||||||||||||||| |||| | | |||||| |||||| |||||||||||||| ||| |||||||| |||||    
T  12947993 ttatgagatcaaattgagacactttatagttaggggatcaaaatgaaaatc-aaaaataagttaagggactaaatgatatattaa 12947910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 19525323 - 19525399
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| |||||||| ||||||||||||| |||| | |||||| | ||| | |||||||||||||| |||||||||||    
T  19525323 ttatgtgaccaaatggagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgat 19525399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 12950301 - 12950371
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||||||||||||||||||| |||| | |||||||| ||| | | |||||||||||| ||| |||||||    
T  12950301 gaccaaattgagacactttatagttaggggaccaaaatgaaaaccataaataagttaagggactaaatgat 12950371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 15510304 - 15510370
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | | |||||| |||||  ||||||||||||| |||||||    
T  15510304 gaccaaattgagacactttatagttaggggatcaaaatgaaatccgaaaataagttaagggaccaaa 15510370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18693781 - 18693707
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| ||||| ||||||||| |||||| |||  | |||||||||||||  |||||||||||||| |||||||    
T  18693781 atttatgggaccagattgagacattttatagttaagggaccaaaataaaattcaaaaataagttaagggaccaaa 18693707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 32521963 - 32522029
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||| |||| |||| | |||||||| |||||  ||||||| |||||||||||||    
T  32521963 gaccaaattgagacactctatagttaggggaccaaaatgaaatccgaaaataaattaagagaccaaa 32522029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 22650669 - 22650726
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaa 66  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  ||||||||||||    
T  22650669 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaa 22650726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 33362631 - 33362688
Alignment:
Q  32 ttagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaacc 89  Q
    |||||| |||||| ||||| | |||||||||||||| |||||||||||| ||||||||    
T  33362631 ttagaggaccaaattaaaaacaaaaaataagttaagggaccaaatgatatattaaacc 33362688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 20988767 - 20988699
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| |||||||||||||||||| |||| | |||||||| ||||   ||||||||||||| |||||||    
T  20988767 gagactaaattgagacactttatagttaggggaccaaaatgaaattcgaaaataagttaagggaccaaa 20988699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 42979523 - 42979471
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataa 61  Q
    ||||||||||| |||||||||| |||||| |||||||| ||||| ||||||||    
T  42979523 gaccaaattgaaacactttatagttagaggaccaaaatgaaatccaaaaataa 42979471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 24805335 - 24805296
Alignment:
Q  40 ccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  24805335 ccaaaataaaaaccaaaaataagttaagagaccaaatgat 24805296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 4567026 - 4566960
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | | |||||| |||||  |||||| |||||| |||||||    
T  4567026 gaccaaattgagacactttatagttaggggatcaaaatgaaatccgaaaatatgttaagggaccaaa 4566960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 15153952 - 15153886
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||| | ||| || |||||| ||||||  |||||||||||||| |||||||    
T  15153952 gaccaaattgagacagtttaaagttaaaggaccaaattaaaattcaaaaataagttaagggaccaaa 15153886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 19050824 - 19050758
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||| | |||| | |||||| | ||||| |||||||||||||| |||||||    
T  19050824 gaccaaattgagacagtttaaagttaggggaccaaattgaaatccaaaaataagttaagggaccaaa 19050758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8762433 - 8762518
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    ||||||| ||||||||||||||| |||||| | |  | |||||| | |||  ||||||||||||||| ||||||| |||| |||||    
T  8762433 atttatgtgaccaaattgagacattttatagtcatgggaccaaattgaaaattaaaaataagttaagggaccaaacgatatattaa 8762518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 10085878 - 10085966
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagaga-accaaaataaaatctaaaaataagttaagagaccaaatgatacattaaacc 89  Q
    ||||||| ||||||||||| |||||||| | ||| ||| |||||| | ||||  |||||||||||||| |||||||||||  ||||||||    
T  10085878 atttatgggaccaaattgaaacactttaaagtta-agagaccaaagtgaaattcaaaaataagttaagggaccaaatgatgtattaaacc 10085966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 1982793 - 1982721
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||||| | |||| | |||  | |||||||||||||  |||||||||||||| |||||||    
T  1982793 ttatgggaccaaattgagatagtttaaagttaagggaccaaaataaaattcaaaaataagttaagggaccaaa 1982721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 12952769 - 12952841
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||||||  |||| | |||  | |||||||| |||| ||||||||||||||| |||||||    
T  12952769 ttatgggaccaaattgagacggtttaaagttaagggaccaaaatgaaatttaaaaataagttaagggaccaaa 12952841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 28236928 - 28237000
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||| ||||||||||  |||| ||||| || || ||||| ||||  |||||||||||||| |||||||    
T  28236928 ttatgagactaaattgagacggtttaaaattaaaggactaaaatgaaattcaaaaataagttaagggaccaaa 28237000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 37371138 - 37371066
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||||||| |||| | |||  | |||||||| ||||  |||||||||||||| |||||||    
T  37371138 ttatgggaccaaattgagacaatttaaagttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa 37371066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 41905240 - 41905180
Alignment:
Q  19 agacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| |||||| |||| | |||||||| ||| | |||||||||||||| |||||||||||    
T  41905240 agacattttatagttaggggaccaaaatgaaaaccaaaaataagttaagggaccaaatgat 41905180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 43935268 - 43935194
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||||||||||| |||||| |||||||| ||||| |||||||||||||| |||||||    
T  43935268 atttatgagaccaaattgagacactttatagttagaggaccaaaatgaaatccaaaaataagttaagggaccaaa 43935194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 41516379 - 41516467
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaaccaa 91  Q
    ||||| ||||||||| |||||||||||| |||| | |||||||| ||| | ||||||||||||||||||||||||||| ||||||||||    
T  41516379 ttatgggaccaaattaagacactttatagttaggggaccaaaattaaaacaaaaaataagttaagagaccaaatgatatattaaaccaa 41516467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 7347261 - 7347327
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| |||||||    
T  7347261 gaccaaattgagacactttataattatggaaccaaaataaaatctaaaattaagttaagggaccaaa 7347327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 19278434 - 19278358
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| ||||||||||||||||||||||||||  | |||||||| ||||| |||||||||||||| |||||||||||    
T  19278434 ttatgggaccaaattgagacactttataattaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgat 19278358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 22060537 - 22060456
Alignment:
Q  10 accaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaaccaa 91  Q
    ||||||||||||||||||||| |||||| |||||| ||||| |  ||||||||||||| |||||||||||| ||||| ||||    
T  22060537 accaaattgagacactttatagttagaggaccaaattaaaaacacaaaataagttaagtgaccaaatgatatattaagccaa 22060456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 43936175 - 43936247
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| ||| |||||||| |||||| |||||||| ||||| |||||||||||||| |||||||    
T  43936175 ttatgagaccaaattaagaaactttatagttagaggaccaaaatgaaatccaaaaataagttaagggaccaaa 43936247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 13446450 - 13446388
Alignment:
Q  13 aaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||| ||||||||||||||||||||  |||||||||||||  |||||||    
T  13446450 aaattgagacactttatagttagagaaccaaaataaaattcaaaaataagttaaaggaccaaa 13446388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18801298 - 18801224
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| |||||||||||||||||||||| |||| | |||||||| ||||  |||||||||||||| |||||||    
T  18801298 atttatgggaccaaattgagacactttatagttaggggaccaaaatgaaattcaaaaataagttaagggaccaaa 18801224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 19848867 - 19848941
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| |||||||||||||||||||||| |||  | |||||||| ||||| |||||||||||||| |||||||    
T  19848867 atttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaa 19848941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 38002555 - 38002621
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||  | |||||||| |||||| |||||||||||||||||||||    
T  38002555 gaccaaattgagacactttatagttaagggaccaaaatgaaatctgaaaataagttaagagaccaaa 38002621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 41126314 - 41126248
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | |||||||| |||||| ||||||||||||| |||||||    
T  41126314 gaccaaattgagacactttatagttaggggaccaaaatgaaatctgaaaataagttaagggaccaaa 41126248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 41618540 - 41618606
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||| ||||||||||||||||| | |||||||| ||||| |||||||||||||| |||||||    
T  41618540 gaccaaatttagacactttataattaggggaccaaaatgaaatccaaaaataagttaagggaccaaa 41618606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 17288255 - 17288327
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| |||||||||||||||||||||| |||| | |||||||| ||| | |||||||||||||| |||||||    
T  17288255 ttatgggaccaaattgagacactttatagttaggggaccaaaattaaaacaaaaaataagttaagggaccaaa 17288327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 33341373 - 33341306
Alignment:
Q  9 gaccaaattgagacactttataatta-gagaaccaaaataaaatctaaaaataagttaagagaccaaat 76  Q
    ||||||||||||||| |||||| ||| |||| ||||||||||||| |||||||||||||||||||||||    
T  33341373 gaccaaattgagacaatttatagttatgaga-ccaaaataaaatccaaaaataagttaagagaccaaat 33341306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 33459578 - 33459654
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| |||||||||||||||||||||| |||||| |||||||| ||| | |||||||||||| | ||| |||||||    
T  33459578 ttatgggaccaaattgagacactttatagttagaggaccaaaatgaaaaccaaaaataagttatgggactaaatgat 33459654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 48672808 - 48672883
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaat 76  Q
    ||||||| |||||||||||||||||||| ||| |  |||||||| ||||| | |||||||| ||||||||||||||    
T  48672808 atttatgggaccaaattgagacactttacaataatggaaccaaattaaaaacaaaaaataaattaagagaccaaat 48672883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 1884315 - 1884249
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| ||||||||||  | |||||||||||||  |||||||||||||| |||||||    
T  1884315 gaccaaattgagacattttataattaagggaccaaaataaaattcaaaaataagttaagggaccaaa 1884249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 1970896 - 1970818
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||||||||||| |||||||||| |||  |||||||| ||||| | |||||||| ||||||||||| |||||    
T  1970896 atttatgggaccaaattgaaacactttatagttaaggaaccaaagtaaaaaccaaaaataaattaagagaccagatgat 1970818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4858377 - 4858455
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||||||||||||||| |||||| |||| | | |||| | ||| |||||||||||||||| |||||||||||    
T  4858377 atttatgggaccaaattgagacattttatagttaggggatcaaagtgaaaactaaaaataagttaagggaccaaatgat 4858455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13446691 - 13446769
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||||||||||||||||| |||| ||  ||||||||| | ||| | |||||||||||||| |||||||||||    
T  13446691 atttatgggaccaaattgagacactatatagttgaagaaccaaagtgaaaaccaaaaataagttaagtgaccaaatgat 13446769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 18802422 - 18802500
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||| |||||||||||||||||| |||| | | |||||| ||| | |||||||||||||| |||||||||||    
T  18802422 atttatgggactaaattgagacactttatagttaggggatcaaaatgaaaacaaaaaataagttaagggaccaaatgat 18802500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 19279645 - 19279719
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| |||||||||||||||||||||| |||| | |||||| | ||| | |||||||||||||| |||||||    
T  19279645 atttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaa 19279719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 34557472 - 34557414
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||| |||| | ||||||||||||||  |||||||||||||    
T  34557472 gaccaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaag 34557414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 36673877 - 36673943
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||||| |||| | ||||||||||||||  ||||||||||||| |||||||    
T  36673877 gaccaaattgagacattttatagttaggggaccaaaataaaatccgaaaataagttaagggaccaaa 36673943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 36702860 - 36702786
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| ||||||||||||||| |||| | |||  | |||||||| |||||||||||||||||||| |||||||    
T  36702860 atttatgggaccaaattgagacagtttaaagttaagggaccaaaatgaaatctaaaaataagttaagggaccaaa 36702786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 41616699 - 41616633
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  ||||||||||||| |||||||    
T  41616699 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 41616633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 47163236 - 47163170
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||||| ||||||||| || ||||||||| |||||| |||||||||||||| |||||||| |||||    
T  47163236 atttatgggaccaaattaaggcactttatagttagaggaccaaaataaaatccaaaaataaattaag 47163170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 45721808 - 45721865
Alignment:
Q  10 accaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||||||||||||||||||| |||| | |||||||| ||| ||||||||||||||||    
T  45721808 accaaattgagacactttatagttaggggaccaaaatgaaaactaaaaataagttaag 45721865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 25153741 - 25153650
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaagagaccaaatgatacattaaaccaat 92  Q
    ||||||| |||||||||||||||||||||| |||| | |||||| | ||||||  ||||||||||||| |||||||||||  ||||| |||||    
T  25153741 atttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatc-gaaaataagttaagggaccaaatgatgtattaagccaat 25153650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 43007684 - 43007767
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    ||||| |||||||||||||||||||||| |||||| |||||| | |||||| ||||||||||| |  |||||||||||| |||||    
T  43007684 ttatgggaccaaattgagacactttatagttagaggaccaaattgaaaatc-aaaaataagttgaaggaccaaatgatatattaa 43007767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 48754067 - 48754015
Alignment:
Q  13 aaattgagacactttataattagagaaccaaaataaaatctaaaaataagtta 65  Q
    ||||||| ||||||||||||||  | |||||||||||||||||||||||||||    
T  48754067 aaattgaaacactttataattatgggaccaaaataaaatctaaaaataagtta 48754015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 40926560 - 40926643
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaaccaat 92  Q
    |||||||||||||||||||||| |||| | |||||| | ||| | |||||||||||||| ||| |||||||  ||||| |||||    
T  40926560 gaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggactaaatgatgtattaagccaat 40926643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 1885282 - 1885348
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||| ||||||||||||  | |||||||| ||||  |||||||||||||| |||||||    
T  1885282 gaccaaattgagatactttataattaagggaccaaaatgaaattcaaaaataagttaagggaccaaa 1885348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 30222721 - 30222655
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||| ||||||||||||| | |||||||| ||||| |||||||| ||||  |||||||    
T  30222721 gaccaaattgagatactttataattaggggaccaaaatgaaatccaaaaataaattaaaggaccaaa 30222655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 30224017 - 30224083
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||||| |||| | |||||||| |||||  ||||||||||||| |||||||    
T  30224017 gaccaaattgagacaatttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 30224083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 34558342 - 34558408
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||| |||||||| |||| | |||||||| |||||  ||||||||||||| |||||||    
T  34558342 gaccaaattgagatactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 34558408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 38001579 - 38001513
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||| |||||||||| |||||| |||||||| ||||   ||||||||||||| |||||||    
T  38001579 gaccaaattgaaacactttatagttagaggaccaaaatgaaattcgaaaataagttaagggaccaaa 38001513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 38408315 - 38408392
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    |||||| ||||||||||||||| |||||| |||||| | |||||| |||||||| ||||| |||||||||||| |||||    
T  38408315 gaccaatttgagacactttatagttagaggaccaaagtgaaaatc-aaaaataaattaagggaccaaatgatatattaa 38408392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 43006460 - 43006390
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||||||||||||||| ||| |||| | |||||| | ||| | |||||||||||||| |||||||||||    
T  43006460 gaccaaattgagacacttaatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgat 43006390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 33458380 - 33458315
Alignment:
Q  14 aattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||||||||||||| ||| || |||||||| ||| | |||||||||||||  |||||||||||    
T  33458380 aattgagacactttatagttaaaggaccaaaatgaaaaccaaaaataagttaaaggaccaaatgat 33458315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22746353 - 22746441
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaacc 89  Q
    ||||||| |||||||||||||||||||||| |||| | || ||| | ||| | |||||||||||||  |||||||| ||  ||||||||    
T  22746353 atttatgggaccaaattgagacactttatagttaggggactaaattgaaaacaaaaaataagttaaaggaccaaataatgtattaaacc 22746441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 28325153 - 28325078
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| ||||||||||||| |||||| | |||| | |||||||| ||| | |||||||||||||| |||||||||||    
T  28325153 ttatgggaccaaattgagatactttaaagttaggggaccaaaattaaaaccaaaaataagttaag-gaccaaatgat 28325078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 24873632 - 24873695
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaa 66  Q
    ||||| |||||||||||||||||||||| |||| | | |||||| ||| | |||||||||||||    
T  24873632 ttatgggaccaaattgagacactttatagttagggcatcaaaatgaaaacaaaaaataagttaa 24873695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 36702983 - 36703062
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaat-ctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||||||||||||||| |||| | |||| | || ||||| |||| | |||||||||||||| |||||||||||    
T  36702983 atttatgggaccaaattgagacagtttaaatttaggggactaaaatgaaatccaaaaaataagttaagggaccaaatgat 36703062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 41515077 - 41514996
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    ||||| ||||||||||| |||||||||| |||| |||||||||| ||| | |||||||| ||||| || ||||||||| |||||    
T  41515077 ttatgggaccaaattgaaacactttatagttag-gaaccaaaattaaaaccaaaaataaattaaggga-caaatgatatattaa 41514996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 48755592 - 48755655
Alignment:
Q  12 caaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||| |||||| ||| || |||||||| ||||  |||||||||||||| |||||||    
T  48755592 caaattgagacattttatagttataggaccaaaatgaaattcaaaaataagttaagggaccaaa 48755655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 2903119 - 2903061
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||| ||||  || |||||| |||||  |||||||||||||    
T  2903119 gaccaaattgagacactttatagttaggaaatcaaaatgaaatccgaaaataagttaag 2903061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 7345989 - 7345923
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||| ||||| |||||| |||  | |||||||| ||||| |||||||||||||| |||||||    
T  7345989 gaccaaattaagacagtttatatttatgggaccaaaatgaaatccaaaaataagttaagggaccaaa 7345923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 18670544 - 18670610
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||| |||||||| |||| | |||  | |||||||||||||| |||||||||||||| |||||||    
T  18670544 gaccaatttgagacattttaaagttaagggaccaaaataaaatccaaaaataagttaagggaccaaa 18670610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 21171527 - 21171593
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||| | |||| | |||||| | ||||| |||||||||||||| |||||||    
T  21171527 gaccaaattgagacaatttaaagttaggggaccaaattgaaatccaaaaataagttaagggaccaaa 21171593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 25154969 - 25155047
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||||||  |||||||||||||||||| |||  | | |||| | ||| | |||||||||||||| |||||||||||    
T  25154969 atttatgagattaaattgagacactttatagttaagggatcaaattgaaaaccaaaaataagttaagggaccaaatgat 25155047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 89
Target Start/End: Original strand, 32894884 - 32894918
Alignment:
Q  55 aaaataagttaagagaccaaatgatacattaaacc 89  Q
    ||||||||||||| |||||||||||||||||||||    
T  32894884 aaaataagttaagggaccaaatgatacattaaacc 32894918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 35480278 - 35480217
Alignment:
Q  13 aaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||| |||| || ||||||| |||||  ||||||||||||| |||||||    
T  35480278 aaattgagacactttatagttaggga-ccaaaatgaaatccgaaaataagttaagggaccaaa 35480217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 41127212 - 41127270
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||||||||||| |||||||| |||| | |||||||| |||||  |||||||||||||    
T  41127212 gaccaaattgagatactttatagttaggggaccaaaatgaaatccgaaaataagttaag 41127270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 8439847 - 8439783
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||| ||||||||||||||| |||| |||||  | |||||||| ||||  ||||||||||||||    
T  8439847 ttatgggaccaaattgagacagtttacaattaagggaccaaaatgaaattcaaaaataagttaag 8439783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 33228928 - 33228856
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||||| | |||| |||||  | |||||||| ||||  |||||||||||||| |||||||    
T  33228928 ttatgggaccaaattgagatagtttaaaattaagggaccaaaatgaaattcaaaaataagttaagggaccaaa 33228856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 37373615 - 37373543
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||| |||||||||||| |||| | |||  | |||||||| ||||  |||||||||||||| |||||||    
T  37373615 ttatgagatcaaattgagacagtttaaagttaaggtaccaaaatgaaattcaaaaataagttaagggaccaaa 37373543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 44114726 - 44114766
Alignment:
Q  39 accaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||||| ||| |||||||||||||||| |||||||||||    
T  44114726 accaaaatgaaaactaaaaataagttaagggaccaaatgat 44114766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 31711173 - 31711097
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||||||||||||||||||||||||| ||| || |||||||| ||||| |||||||||||||| |||||||||||    
T  31711173 ttatgagaccaaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataagttaagggaccaaatgat 31711097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 15445513 - 15445445
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||| |||||||    
T  15445513 gagaccaaattgagacactttataattaggggaccaaaatgaaatccaaaaataagttaagggaccaaa 15445445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 1273468 - 1273554
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaacca 90  Q
    ||||| |||||||||||||||||||||| |||| | |||||| ||||| | |||||||||||||| |||||||||||| |||||||||    
T  1273468 ttatgggaccaaattgagacactttatagttaggggaccaaattaaaacc-aaaaataagttaagggaccaaatgatatattaaacca 1273554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 15446703 - 15446777
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| ||||||||||| ||||||||||||||||  |||||||| ||||| |||||||||||||| |||||||    
T  15446703 atttatgggaccaaattgaaacactttataattagatgaccaaaatgaaatccaaaaataagttaagggaccaaa 15446777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 26791466 - 26791531
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||||||||||| || | ||||||||||| ||||||||||||||||||||||    
T  26791466 gaccaaattgagacactttataattaggga-ctaaaataaaatccaaaaataagttaagagaccaaa 26791531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 33376301 - 33376223
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||||||||||||||||||||||||||| | || ||| | ||| | ||||||||||||||||||||||||||    
T  33376301 atttatgggaccaaattgagacactttataattagggcactaaattgaaaaccaaaaataagttaagagaccaaatgat 33376223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 38554010 - 38553924
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaacc 89  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||| |  ||||||| ||||| |||||||||||  ||||||||    
T  38554010 ttatgagaccaaattgagacactttatagttagaagaccaaaataaaaacagaaaataaattaagggaccaaatgatgtattaaacc 38553924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 40143735 - 40143662
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaat 76  Q
    |||||||| ||||||||||||||||||| |||| | || ||||| ||| |||||||||||||||||||||||||    
T  40143735 ttatgagagcaaattgagacactttatagttaggggactaaaatgaaaactaaaaataagttaagagaccaaat 40143662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 28103521 - 28103597
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| |||||||||||||||||||||| |||  | |||||||| ||||| |||||||||||||| |||||||||||    
T  28103521 ttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgat 28103597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 40146658 - 40146734
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| |||||||||||||||||||||| ||| || |||||||||||| | ||||||| |||||| |||||||||||    
T  40146658 ttatgggaccaaattgagacactttatagttaaaggaccaaaataaaaaccaaaaatacgttaagggaccaaatgat 40146734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 47667259 - 47667188
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| | |||||||||||||  |||||||    
T  47667259 ttatgagaccaaattgagacactttatagttagag-accaaaataaaaaccaaaaataagttaaaggaccaaa 47667188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 11115015 - 11115106
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaaccaatta 94  Q
    ||||| ||||||||||||| |||||||| |||| | |||||||| ||| || ||||||||||||| |||||||||||  ||||| |||||||    
T  11115015 ttatgggaccaaattgagatactttatagttaggggaccaaaatgaaaactgaaaataagttaagggaccaaatgatgtattaagccaatta 11115106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 19049913 - 19049979
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||||||||||| | | |||||| ||||| |||||||||||||| |||||||    
T  19049913 gaccaaattgagacactttataattaggggatcaaaatgaaatccaaaaataagttaagggaccaaa 19049979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 21104346 - 21104428
Alignment:
Q  4 tatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    ||||||||||||||||||||||||||| |||| | |||||||| ||| | |||||||| |||||  ||||||||||| |||||    
T  21104346 tatgagaccaaattgagacactttatagttaggggaccaaaatgaaaacaaaaaataatttaaggaaccaaatgatatattaa 21104428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 27408846 - 27408768
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||||||||||||||||||| |||||  |||||| | ||| || ||||||||||||| |||||||||||    
T  27408846 atttatgggaccaaattgagacactttatagttagatgaccaaattgaaaactgaaaataagttaagggaccaaatgat 27408768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 37560332 - 37560410
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||||||||||||||||||| |||| | |||||| | ||| | |||||||||||||| |||||||||||    
T  37560332 atttatgggaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgat 37560410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 26393162 - 26393250
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaaccaa 91  Q
    ||||| |||||||||||||||||||||| ||| || | ||||||||||   |||||||||||||| |||||||| ||  ||||||||||    
T  26393162 ttatgggaccaaattgagacactttatagttaaaggatcaaaataaaaataaaaaataagttaagggaccaaatcatgtattaaaccaa 26393250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 46796061 - 46796133
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| |||||||||||||||||||||| |||| | |||||||| ||| | |||||||||||||| |||||||    
T  46796061 ttatgggaccaaattgagacactttatagttaggggaccaaaattaaaaccaaaaataagttaagggaccaaa 46796133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 30682803 - 30682728
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaat 76  Q
    |||||| |||||||||| |||||||||||| |||  | |||||||| ||| |||||||||||||||| ||||||||    
T  30682803 atttataagaccaaattaagacactttatagttaagggaccaaaatgaaaactaaaaataagttaagggaccaaat 30682728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 33377397 - 33377475
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||||||||||||||||||| |||| | |||||| | |||||| |||||||||||||| |||||||||||    
T  33377397 atttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatc-aaaaataagttaagggaccaaatgat 33377475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 86886 - 86808
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||||||||||  ||||||| |||| |||||||| | ||| |||||||||| ||||||||| |||||||    
T  86886 atttatgggaccaaattgagatgctttatagttagggaaccaaagtgaaaactaaaaataaattaagagactaaatgat 86808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10403450 - 10403527
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||||||||||||||| |||||||||| ||||| || |||| | ||| | |||||||||||||||||| |||||||    
T  10403450 atttatgagaccaaattgatacactttatagttaga-aatcaaagtgaaaaccaaaaataagttaagagactaaatgat 10403527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 12396915 - 12396981
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  ||||||||||||| |||||||    
T  12396915 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 12396981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 29833447 - 29833381
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| ||||||||||| | |||||||| |||||  ||||||||||||| |||||||    
T  29833447 gaccaaattgagacattttataattaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 29833381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 53400260 - 53400202
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||| |||  | |||||||| ||||||||||||||||||||    
T  53400260 gaccaaattgagacactttatagttatgggaccaaaatgaaatctaaaaataagttaag 53400202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 11113823 - 11113747
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||||||||||||||||||||||||| |||  | || ||||| ||| |  ||||||||||||| |||||||||||    
T  11113823 ttatgagaccaaattgagacactttatagttaagggactaaaatgaaaaccgaaaataagttaagtgaccaaatgat 11113747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 30671071 - 30671003
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| |||||||||||||||||| |||  | |||||||| |||||  |||||||||||||||||||||    
T  30671071 gagactaaattgagacactttatagttaagggaccaaaatgaaatccgaaaataagttaagagaccaaa 30671003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 52881971 - 52882051
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaacc 89  Q
    |||| ||||||||||||||||| | || | |||||||||||||| |||||||| ||||| |||||||  ||| ||||||||    
T  52881971 gacctaattgagacactttatagtcaggggaccaaaataaaatccaaaaataaattaagggaccaaaacatatattaaacc 52882051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 28370682 - 28370765
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaaccaat 92  Q
    ||||||||||||||| |||| | |||||| |||||| | ||||| |||||||||||||| |||||||  ||  |||||||||||    
T  28370682 gaccaaattgagacagtttaaagttagaggaccaaattgaaatccaaaaataagttaagggaccaaagcatgtattaaaccaat 28370765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 35787879 - 35787804
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaat 76  Q
    ||||||| ||||||||||| ||| |||||| |||||| |||||| | ||| | |||||||||||| ||||||||||    
T  35787879 atttatgggaccaaattgaaacattttatagttagaggaccaaagtgaaaaccaaaaataagttatgagaccaaat 35787804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 23752091 - 23752025
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||| | |||| | |||||| | |||||||||||||||||||| |||||||    
T  23752091 gaccaaattgagacaatttaaagttaggggaccaaattgaaatctaaaaataagttaagggaccaaa 23752025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 48207758 - 48207824
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||||||||   |||||||| ||| | |||||||||||||  |||||||    
T  48207758 gaccaaattgagacactttataattaggagaccaaaatgaaaacaaaaaataagttaaaggaccaaa 48207824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 53401492 - 53401558
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||||| |||  | || ||||||||||| |||||||||||||| |||||||    
T  53401492 gaccaaattgagacagtttatagttatgggactaaaataaaatccaaaaataagttaagggaccaaa 53401558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 37559080 - 37559003
Alignment:
Q  2 tttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||| ||||||||||||||| |||||| |||| | |||||| | ||| | ||||||||||||||  ||||||||||    
T  37559080 tttatgggaccaaattgagacattttatagttaggggaccaaattgaaaaccaaaaataagttaaggaaccaaatgat 37559003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10403362 - 10403298
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagtta 65  Q
    ||||| ||||||||||| |||||||||||| |||| | |||||| ||||| | ||||||||||||    
T  10403362 atttacgagaccaaattaagacactttatagttaggggaccaaagtaaaaaccaaaaataagtta 10403298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 15787033 - 15786957
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| ||||||||||||||| |||||| |||| | | |||||| ||| | |||||||||||||  |||||||||||    
T  15787033 ttatgggaccaaattgagacagtttatagttaggggaacaaaatgaaaacaaaaaataagttaatggaccaaatgat 15786957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 15787537 - 15787601
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||| |||||||||||||||||||||| |||| | |||||||| ||| | |||||||| |||||    
T  15787537 ttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaacaaaaaataaattaag 15787601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 30683060 - 30683151
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaagagaccaaatgatacattaaaccaat 92  Q
    ||||||| |||||||||||||||||||||| |||  | |||||||| |||||| |||||||| ||||| |||||||  ||  |||||||||||    
T  30683060 atttatgggaccaaattgagacactttatagttaagggaccaaaatgaaaatc-aaaaataaattaagggaccaaagcatgtattaaaccaat 30683151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 38555317 - 38555397
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaacc 89  Q
    ||||||||| | |||||||||| |||| | |||||| ||||| |||||||||||||||| ||| ||| || | ||||||||    
T  38555317 gaccaaattaatacactttatagttaggggaccaaagtaaaaactaaaaataagttaagggacaaaacgagatattaaacc 38555397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 3528271 - 3528224
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaa 50  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||||    
T  3528271 ttatgggaccaaattgagacactttatagttaaggaaccaaaataaaa 3528224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 39591009 - 39590946
Alignment:
Q  16 ttgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||||||||||| |||| | |||||| | ||| | |||||||||||||| |||||||||||    
T  39591009 ttgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaatgat 39590946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 48206232 - 48206169
Alignment:
Q  12 caaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||| ||||||||||||||  |||||||||||||| | |||||||| |||| ||| ||||    
T  48206232 caaattgaaacactttataattaaggaaccaaaataaaaaccaaaaataaattaaaagatcaaa 48206169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 52880889 - 52880830
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||| |||| | |||||||| ||||||  |||||||||||||    
T  52880889 gaccaaattgagacactttatagttaggggaccaaaataaaaatccgaaaataagttaag 52880830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 526760 - 526826
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||| ||||||||||||||| |||| | |||||||| |||||  ||||||| ||||| |||||||    
T  526760 gaccaagttgagacactttatagttaggggaccaaaatgaaatccgaaaataaattaagggaccaaa 526826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 937143 - 937205
Alignment:
Q  13 aaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||| |||| | |||||||| |||||  ||||||| ||||| |||||||    
T  937143 aaattgagacactttatagttaggggaccaaaatgaaatccgaaaataaattaagggaccaaa 937205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 2310823 - 2310889
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||||| |||| | |||||||| ||||   ||||||||||||| |||||||    
T  2310823 gaccaaattgagacattttatagttaggggaccaaaatgaaattcgaaaataagttaagggaccaaa 2310889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 6616252 - 6616322
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||| ||||||||||||||| |||| | |||||| | ||| |  ||||||||||||| |||||||||||    
T  6616252 gaccaatttgagacactttatagttaggggaccaaagtgaaaacggaaaataagttaagggaccaaatgat 6616322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 30672105 - 30672171
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||| | |||  | |||||||| |||||  ||||||||||||| |||||||    
T  30672105 gaccaaattgagacactttaaagttacgggaccaaaatgaaatccgaaaataagttaagggaccaaa 30672171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 39592330 - 39592420
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaaccaattattaaa 99  Q
    |||||| ||||||||||||||| |||| | || ||| | ||| |  ||||||||||||| |||||||||||| ||||| || || ||||||    
T  39592330 gaccaatttgagacactttatagttaggggactaaagtgaaaacataaaataagttaagggaccaaatgatatattaagcctataattaaa 39592420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 44302803 - 44302729
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| || ||||||||||||||||||| |||||  ||||| || ||||  |||||| ||||||| |||||||    
T  44302803 atttatgggatcaaattgagacactttatagttagatgaccaatatgaaattcaaaaattagttaagggaccaaa 44302729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 44690900 - 44690962
Alignment:
Q  13 aaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||| |||||| |||  |||||||||| |||||  ||||||||||||| |||||||    
T  44690900 aaattgagacattttatagttatggaaccaaaatgaaatccgaaaataagttaagggaccaaa 44690962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 56001309 - 56001375
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| |  ||||||| |||   |||||||||||||| |||||||    
T  56001309 gaccaaattgagacactttatagttagggggccaaaatgaaaataaaaaataagttaagggaccaaa 56001375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 55952906 - 55952830
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgata 80  Q
    ||||||||||||||||| |||||||||| |||| | || ||| |||||   |||||||| ||||| ||||||||||||    
T  55952906 ttatgagaccaaattgaaacactttatagttaggggactaaattaaaaatcaaaaataaattaag-gaccaaatgata 55952830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 56297714 - 56297783
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagacc 72  Q
    ||||||||||||||||||||| |||| |||||  | | |||||| ||||  |||||||||||||| ||||    
T  56297714 ttatgagaccaaattgagacagtttaaaattaagggatcaaaatgaaattcaaaaataagttaagggacc 56297783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 2309916 - 2309853
Alignment:
Q  12 caaattgagacactttataatta-gagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||| |||||||||||||| ||| |||||||| ||||| |||||||| ||||| |||||||    
T  2309916 caaattgaaacactttataattatgag-accaaaatgaaatccaaaaataaattaagggaccaaa 2309853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 26202421 - 26202493
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||||||| |||| | |||  | |||||||| ||||  |||||||||||||| |||||||    
T  26202421 ttatgggaccaaattgagacagtttaaagttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa 26202493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 38370363 - 38370291
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||| |||||||||  |||||  |||||| | |||   |||||||||||||| |||||||    
T  38370363 ttatgagaccaaattgatacactttatcgttagatgaccaaattgaaaatgaaaaataagttaagggaccaaa 38370291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 43894186 - 43894122
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||| ||||||||||||||| |||||| |||| | |||||| | ||| | ||||||||||||||    
T  43894186 ttatgtgaccaaattgagacattttatagttaggggaccaaactgaaaaccaaaaataagttaag 43894122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 43895648 - 43895704
Alignment:
Q  19 agacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||| | |||||| ||||  | |||||||||||||| |||||||    
T  43895648 agacactttataattaggggaccaaactaaataccaaaaataagttaagggaccaaa 43895704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 44655766 - 44655730
Alignment:
Q  39 accaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||| |||||||||||||| |||||||    
T  44655766 accaaaataaaatcaaaaaataagttaagggaccaaa 44655730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 44664397 - 44664433
Alignment:
Q  39 accaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||| |||||||||||||| |||||||    
T  44664397 accaaaataaaatccaaaaataagttaagggaccaaa 44664433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 43101975 - 43101899
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||||||||||| |||||||||||    
T  43101975 ttatgggaccaaattgagacactttataattagaggaccaaaatgaaaaccaaaaataagttaagggaccaaatgat 43101899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 26798941 - 26799030
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaaccaat 92  Q
    ||||| ||||||||||||||| |||||| |||| | |||||||||||| | ||||||||||||||||||||||||||  ||||| |||||    
T  26798941 ttatgggaccaaattgagacattttatagttaggggaccaaaataaaaaccaaaaataagttaagagaccaaatgatgtattaagccaat 26799030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 39190763 - 39190823
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  39190763 gagactaaattgagacactttataattaggggaccaaaataaaatctaaaaataagttaag 39190823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8372649 - 8372734
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    ||||||| |||||||||||||||||||||| |||| | |||||||| ||| | |||||||||||||| ||||||| |||| |||||    
T  8372649 atttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagggaccaaacgatatattaa 8372734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 54654001 - 54654077
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| |||||||||||||||||||||| |||  | |||||||| ||||| |||||||||||||| |||||||||||    
T  54654001 ttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgat 54654077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 7822027 - 7822093
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||||||||   |||||||||||||| |||| ||||||||| |||||||    
T  7822027 gaccaaattgagacactttataattaggagaccaaaataaaatccaaaattaagttaagggaccaaa 7822093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10987686 - 10987764
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||||||||||||||||||| |||| | |||||||| ||| | |||||||||||||| || ||||||||    
T  10987686 atttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagggatcaaatgat 10987764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 11219509 - 11219439
Alignment:
Q  5 atgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||||||| |||| | |||||||| ||||| |||||||||||||  |||||||    
T  11219509 atgagaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaaataagttaacggaccaaa 11219439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 29536797 - 29536723
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| |||||||||||||||||||||| |||||| | |||||| ||||| |||||||||| ||| |||||||    
T  29536797 atttatgggaccaaattgagacactttatagttagaggatcaaaatgaaatccaaaaataagtcaagggaccaaa 29536723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 32979171 - 32979097
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| || ||||||||||||||||||| |||||| |||||||| |||| ||||||| ||||||| |||||||    
T  32979171 atttatgggatcaaattgagacactttatagttagaggaccaaaatgaaatttaaaaattagttaagggaccaaa 32979097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 47808139 - 47808205
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||||||||||| |||  |||||||| | ||||| ||||||||||||||    
T  47808139 atttatgagaccaaattgagacactttatagttaaggaaccaaagtgaaatccaaaaataagttaag 47808205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 53049078 - 53049144
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | ||||||||||||||  ||||||||||||| |||||||    
T  53049078 gaccaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaagggaccaaa 53049144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 39133092 - 39133011
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaacca 90  Q
    |||||||||||||||||||||| |||| | |||||| | ||| | ||||||||||||||||| ||||||||  |||||||||    
T  39133092 gaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagagatcaaatgatgtattaaacca 39133011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 39287545 - 39287480
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaa 74  Q
    |||||||||||||||||||||| |||||| |||||||| |||||  ||||||||||||| ||||||    
T  39287545 gaccaaattgagacactttatagttagaggaccaaaatgaaatccgaaaataagttaagggaccaa 39287480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 51825654 - 51825739
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    ||||||| ||||||||||| |||||||||| |||  | |||||| | ||||| |||||||||||||| |||||||||||| |||||    
T  51825654 atttatgggaccaaattgaaacactttatagttaagggaccaaagtgaaatccaaaaataagttaagggaccaaatgatatattaa 51825739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 48034086 - 48034026
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||  |||||||||||||    
T  48034086 gagatcaaattgagacactttatagttagaggaccaaaataaaatccgaaaataagttaag 48034026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 48253014 - 48252942
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| |||||||||||||||||||||| |||| | |||||||||||| | || ||||||||||| |||||||    
T  48253014 ttatgggaccaaattgagacactttatagttaggggaccaaaataaaaacaaagaataagttaagggaccaaa 48252942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 49122037 - 49122120
Alignment:
Q  3 ttatgagaccaaattgagacactttataatt-agagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    |||||||||||||||||||||||||||| || |||| |||||||| ||| | |||||||||||||  |||||||||||| |||||    
T  49122037 ttatgagaccaaattgagacactttatagttaagag-accaaaatgaaaaccaaaaataagttaaaggaccaaatgatatattaa 49122120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7820473 - 7820399
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| | ||||||||| |||||||||| |||||| |||||||| ||||  |||||||||||||| |||||||    
T  7820473 atttatgggtccaaattgaaacactttatagttagaggaccaaaatgaaattcaaaaataagttaagggaccaaa 7820399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 11220699 - 11220765
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | |||||||| ||||  |||||||||||||| |||||||    
T  11220699 gaccaaattgagacactttatagttaggggaccaaaatgaaattcaaaaataagttaagggaccaaa 11220765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 19579295 - 19579229
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||||| |||| | |||||||| |||||| ||||||||||||| |||||||    
T  19579295 gaccaaattgagacattttatagttaggggaccaaaatgaaatctgaaaataagttaagggaccaaa 19579229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 32973214 - 32973148
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  ||||||||||||| |||||||    
T  32973214 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 32973148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 32974264 - 32974330
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  ||||||||||||| |||||||    
T  32974264 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 32974330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 39288480 - 39288546
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  ||||||||||||| |||||||    
T  39288480 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagtgaccaaa 39288546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 40502260 - 40502322
Alignment:
Q  13 aaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||| |||||||| |||| | |||||||||||||| |||||||||||||| |||||||    
T  40502260 aaattgagatactttatagttaggggaccaaaataaaatccaaaaataagttaagggaccaaa 40502322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 47855379 - 47855445
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||  | |||||||| ||||| |||||||||||||| |||||||    
T  47855379 gaccaaattgagacactttatagttaacggaccaaaatgaaatccaaaaataagttaagggaccaaa 47855445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 48035365 - 48035431
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  ||||||||||||| |||||||    
T  48035365 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 48035431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 48825887 - 48825821
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| ||| |||||||||||   ||||||||||||| |||||||    
T  48825887 gaccaaattgagacactttatagttagggaatcaaaataaaattcgaaaataagttaagggaccaaa 48825821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 51824209 - 51824124
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagaga-accaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    |||||||| | ||||||||||||||||| | ||| ||| | |||| ||||| ||||||||||||||||||||||||||||| |||||    
T  51824209 atttatgaaatcaaattgagacactttaaattta-agagatcaaagtaaaaactaaaaataagttaagagaccaaatgatatattaa 51824124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 52293564 - 52293630
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  ||||||||||||| |||||||    
T  52293564 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 52293630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 53047972 - 53047906
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  ||||||||||||| |||||||    
T  53047972 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 53047906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 41387467 - 41387544
Alignment:
Q  2 tttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||| ||||||||||||||| |||||| |||| | |||||| | ||| | |||||||||||||| |||||||||||    
T  41387467 tttatgggaccaaattgagacattttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgat 41387544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 7583547 - 7583479
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||||| |||| | |||||||| |||||  ||||||||||||  |||||||    
T  7583547 gagaccaaattgagacactttatagttagtggaccaaaatgaaatccgaaaataagttaatggaccaaa 7583479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 17350143 - 17350231
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaaccaattatta 97  Q
    |||||||||||||||||||||| |||| | | |||| | ||| | |||||||||||||| |||||||||||  ||||| ||| ||||||    
T  17350143 gaccaaattgagacactttatagttaggggaacaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagccatttatta 17350231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 51401384 - 51401456
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagacca 73  Q
    ||||||| |||||||||||||||||||||| |||| | |||||| | ||| | |||||||||||||| |||||    
T  51401384 atttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggacca 51401456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 53347038 - 53347105
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||||| |||| | |||||||| |||||  ||||||||||||| |||||||    
T  53347038 gagaccaaattgagacactttatatttag-ggaccaaaatgaaatccgaaaataagttaagggaccaaa 53347105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 33564021 - 33563958
Alignment:
Q  12 caaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||| |||| | || ||||| ||||| |||||||||||||| |||||||    
T  33564021 caaattgagacactttatagttaggggactaaaatgaaatccaaaaataagttaagggaccaaa 33563958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 35633299 - 35633236
Alignment:
Q  12 caaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||| |||||| ||| || |||||||| ||||| |||||||||||||| |||||||    
T  35633299 caaattgagacattttatagttataggaccaaaatgaaatccaaaaataagttaagggaccaaa 35633236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 42633919 - 42633997
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||||||||||||||||| |||| |||| | |||||| | |||||| |||||||||||||| |||||||||||    
T  42633919 atttatgggaccaaattgagacactctatagttaggggaccaaattgaaaatc-aaaaataagttaagggaccaaatgat 42633997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 47806890 - 47806835
Alignment:
Q  12 caaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||||  | |||||||| ||||| ||||||||||||||    
T  47806890 caaattgagacactttataattaagggaccaaaatgaaatccaaaaataagttaag 47806835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 1301107 - 1301041
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||  | |||||||||||||   ||||||||||||| |||||||    
T  1301107 gaccaaattgagacactttatagttatgggaccaaaataaaattcgaaaataagttaagggaccaaa 1301041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 5416273 - 5416207
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||||| |||| | |||||||| |||||  ||||||||||||| |||||||    
T  5416273 gaccaaattgagacattttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 5416207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 8371303 - 8371225
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||||  |||||||||||||| |||||| |||| | |||||||| ||| | |||||||||||||| || ||||||||    
T  8371303 atttatggaaccaaattgagacattttatagttaggggaccaaaatgaaaacaaaaaataagttaagggatcaaatgat 8371225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 19579335 - 19579401
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||  | |||||||| |||||  ||||||||||||| |||||||    
T  19579335 gaccaaattgagacactttatagttaagggaccaaaatgaaatccgaaaataagttaagggaccaaa 19579401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19622088 - 19622010
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||||||| |||||||||||||||||| |||| | |||||| | ||| | |||||||| ||||  |||||||||||    
T  19622088 atttatgagactaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataacttaaaggaccaaatgat 19622010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 41386213 - 41386139
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||  ||||||||||||||||||||| |||| | |||||| | ||| | |||||||||||||| |||||||    
T  41386213 atttatggaaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaa 41386139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 42632789 - 42632711
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| || ||||||||||||||||||| |||| | |||||| | ||| | |||| ||||||||| |||||||||||    
T  42632789 atttatgggatcaaattgagacactttatagttaggggaccaaattgaaaaccaaaagtaagttaagggaccaaatgat 42632711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 46446444 - 46446378
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||| |||||||||||||||||||||  | |||||||||||||   ||||||| |||||||||||||    
T  46446444 gaccgaattgagacactttataattaaggcaccaaaataaaattcgaaaataaattaagagaccaaa 46446378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 51400298 - 51400224
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| ||| |||||||||||||||||| |||| ||| |||| | ||| | |||||||||||||| |||||||    
T  51400298 atttatgggactaaattgagacactttatagttagggaatcaaagtgaaaaccaaaaataagttaagggaccaaa 51400224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 52292665 - 52292603
Alignment:
Q  13 aaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||| |||| | |||||||| |||||  ||||||||||||| |||||||    
T  52292665 aaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 52292603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 53342791 - 53342733
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  |||||||||||||    
T  53342791 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaag 53342733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 55015662 - 55015724
Alignment:
Q  13 aaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||| |||| |||||| | |||||| ||||||| ||||||||||||||| ||||||    
T  55015662 aaattgagacagtttaaaattaggggaccaaattaaaatccaaaaataagttaagaaaccaaa 55015724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 55443591 - 55443657
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | |||||||| ||||   ||||||||||||| |||||||    
T  55443591 gaccaaattgagacactttatagttaggggaccaaaatgaaattcgaaaataagttaagggaccaaa 55443657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 2225063 - 2225131
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||| |||| | |||| | |||||| | ||||| |||||||||||||| |||||||    
T  2225063 gagaccaaattgagacagtttaaagttaggggaccaaattgaaatccaaaaataagttaagggaccaaa 2225131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 11483026 - 11483094
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||| |||||| |||||||||||| |||  | |||||||| |||||| ||||||||||||| |||||||    
T  11483026 gagatcaaattaagacactttatagttaagggaccaaaatgaaatctgaaaataagttaagggaccaaa 11483094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 13077984 - 13078055
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaagagacc 72  Q
    ||||||| ||||||||| ||||| |||||| |||||| |||||| | |||||| |||||||||||||||||||    
T  13077984 atttatgggaccaaattaagacattttatacttagaggaccaaattgaaaatc-aaaaataagttaagagacc 13078055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 30431456 - 30431384
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||||||| |||| |||||  | |||||||| ||||  |||||||||||||| |||||||    
T  30431456 ttatgggaccaaattgagacagtttaaaattaagggaccaaaatgaaattcaaaaataagttaagggaccaaa 30431384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 30838505 - 30838588
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    ||||| ||||||||||||| | |||| | |||  | |||||||||||||  |||||||||||||| |||||||| ||| |||||    
T  30838505 ttatgggaccaaattgagatagtttaaagttaagggaccaaaataaaattcaaaaataagttaagggaccaaatcatatattaa 30838588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 47766986 - 47767048
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaa 66  Q
    ||||| |||||||||||||||||||||| |||| | |||||||| ||| | |||||||||||||    
T  47766986 ttatgggaccaaattgagacactttatagttag-ggaccaaaatgaaaaccaaaaataagttaa 47767048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 52705349 - 52705404
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagtt 64  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  ||||||||||    
T  52705349 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagtt 52705404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 55442666 - 55442611
Alignment:
Q  12 caaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||||||||||||||||| |||| | |||||||| |||| | |||||||||||||    
T  55442666 caaattgagacactttatagttaggggaccaaaatgaaatttgaaaataagttaag 55442611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 5417097 - 5417155
Alignment:
Q  17 tgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||| |||| | |||||||| |||||  ||||||||||||| |||||||    
T  5417097 tgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 5417155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 47854569 - 47854519
Alignment:
Q  25 tttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||| |||||||| ||||| |||||||| ||||| |||||||    
T  47854569 tttataattagaggaccaaaatgaaatccaaaaataaattaagggaccaaa 47854519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 53808401 - 53808323
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||||| |||||||||||||||| ||||   |||||| | ||| |  ||||||||||||| |||||||||||    
T  53808401 atttatgggaccagattgagacactttatagttaggagaccaaattcaaaaccgaaaataagttaagggaccaaatgat 53808323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 54752691 - 54752621
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||||||||||||||||||| |||| | || ||| | |||   |||||||||||||| |||||||||||    
T  54752691 gaccaaattgagacactttatagttaggggactaaattgaaaatgaaaaataagttaagggaccaaatgat 54752621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19253035 - 19253099
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagtta 65  Q
    ||||||| || |||||||||||| ||||||||||| | |||||| | ||| | ||||||||||||    
T  19253035 atttatgggatcaaattgagacattttataattaggggaccaaattgaaaaccaaaaataagtta 19253099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 51214201 - 51214273
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||||||| |||| | |||  | |||||||| ||||  |||||||||||||| |||||||    
T  51214201 ttatgggaccaaattgagacagtttaaagttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa 51214273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 53809528 - 53809604
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||||| ||||||||||  |||| | |||| | |||||||| ||| | |||||||||||||| ||| |||||||    
T  53809528 ttatgagacaaaattgagacgttttaaagttaggggaccaaaatgaaaacaaaaaataagttaagggactaaatgat 53809604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 12993 - 12908
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    ||||||||||||||||||||||||||||||||||  | |||||| |||||   ||||||||||||||||||||||| ||| |||||    
T  12993 atttatgagaccaaattgagacactttataattatgggaccaaagtaaaaatcaaaaataagttaagagaccaaataatatattaa 12908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 48489 - 48577
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaacc 89  Q
    ||||||| || ||||||||||||||||||| ||| || |||||||| ||||| |||||||||||||| |||||||||||  ||||||||    
T  48489 atttatgggatcaaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaaacc 48577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 47153 - 47075
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||||||||||||||| |||| | |||  | | |||||| ||||  |||||||||||||| |||||||||||    
T  47153 atttatgggaccaaattgagacaatttaaagttaagggatcaaaatgaaattcaaaaataagttaagggaccaaatgat 47075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 27438873 - 27438785
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaacc 89  Q
    ||||||| || ||||||||||||||||||| ||| || |||||||| ||||| |||||||||||||| |||||||||||  ||||||||    
T  27438873 atttatgggatcaaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaaacc 27438785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 13173114 - 13173046
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||  ||||||||||||| |||||||    
T  13173114 gagaccaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaagggaccaaa 13173046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 19368557 - 19368625
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||||| |||||| |||||||| |||||  ||||||||||||| |||||||    
T  19368557 gagaccaaattgagacactttatagttagaggaccaaaatgaaatccgaaaataagttaagggaccaaa 19368625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 26584079 - 26584144
Alignment:
Q  10 accaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||||| |||| | ||||||||||||||  ||||||||||||| |||||||    
T  26584079 accaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaagggaccaaa 26584144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 9927688 - 9927617
Alignment:
Q  2 tttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagacca 73  Q
    |||||| |||||||||||||||||||||| |||| | |||||| ||||| | |||||||||||||| |||||    
T  9927688 tttatgggaccaaattgagacactttatagttaggggaccaaactaaaaacaaaaaataagttaagggacca 9927617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 2138682 - 2138744
Alignment:
Q  13 aaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||| |||| | |||||||||||||| |||||||| ||||| |||||||    
T  2138682 aaattgagacactttatagttaggggaccaaaataaaatccaaaaataaattaagggaccaaa 2138744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 18773729 - 18773671
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||||||||||||| ||||||||||| | |||||||| ||||| ||||||||||||||    
T  18773729 gaccaaattgagacattttataattaggggaccaaaatgaaatccaaaaataagttaag 18773671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 26582028 - 26581962
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||| ||||||||| |||  | |||||||||||||| |||||||||||||| |||||||    
T  26582028 gaccaaattgagtcactttatagttaagggaccaaaataaaatccaaaaataagttaagggaccaaa 26581962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 34084167 - 34084257
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaaccaatt 93  Q
    |||||||||||||||||||||||||||||| ||  || |||||| | ||| | | |||||||||||| |||||||||||  ||||| ||||||    
T  34084167 atttatgagaccaaattgagacactttatattt--aggaccaaagtgaaaaccagaaataagttaagggaccaaatgatgtattaagccaatt 34084257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8412349 - 8412424
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaat 76  Q
    ||||||| |||||||||||||||||||||| |||| | || ||| | ||| | |||||||||||||| ||||||||    
T  8412349 atttatgggaccaaattgagacactttatagttaggggactaaattgaaaacaaaaaataagttaagggaccaaat 8412424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 5311354 - 5311284
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||||||||||||||||||| |||| | || ||| | ||| | |||||||||||||| |||||||||||    
T  5311354 gaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaagggaccaaatgat 5311284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 8447296 - 8447238
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  |||||||||||||    
T  8447296 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaag 8447238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 8456100 - 8456042
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  |||||||||||||    
T  8456100 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaag 8456042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22299936 - 22300002
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||||| |||||||||||||||||||||| |||| | |||||| | ||| | ||||||||||||||    
T  22299936 atttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaag 22300002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 28225499 - 28225433
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | |||||||| ||||   ||||||||||||| |||||||    
T  28225499 gaccaaattgagacactttatagttaggggaccaaaatgaaattcgaaaataagttaagggaccaaa 28225433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 33802050 - 33802128
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| || |||||| |||||||||||| |||| | |||||| | ||| | |||||||||||||| |||||||||||    
T  33802050 atttatgggatcaaattaagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaatgat 33802128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 22298685 - 22298613
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| || |||| |||||||||||| |||||||| |||||||| ||| | |||||||||||||  |||||||    
T  22298685 ttatgggatcaaactgagacactttaaaattagaggaccaaaatgaaaaccaaaaataagttaaaggaccaaa 22298613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 31738444 - 31738372
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||| |||||||||| |||| | |||||| | ||| | |||||||||||||| |||||||    
T  31738444 ttatgggaccaaattgaaacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaa 31738372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 8411169 - 8411103
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||| ||||||||||||||||||||||| |||| | || ||| | ||| | ||||||||||||||    
T  8411169 atttataagaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaag 8411103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 18139528 - 18139598
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||| ||||||||||||||| |||||| | |||| | ||| |  ||||||||||||| |||||||||||    
T  18139528 gaccaatttgagacactttatagttagaggatcaaagtgaaaacggaaaataagttaagggaccaaatgat 18139598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 19367792 - 19367734
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||| |||| | |||||||| ||||   |||||||||||||    
T  19367792 gaccaaattgagacactttatagttaggggaccaaaatgaaattcgaaaataagttaag 19367734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 27440208 - 27440286
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||||||||||||||| |||| | |||  | | |||||| ||||  |||||||||||||| |||||||||||    
T  27440208 atttatgggaccaaattgagacaatttaaagttaagggatcaaaatgaaattcaaaaataagttaagggaccaaatgat 27440286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 28226462 - 28226516
Alignment:
Q  12 caaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaa 66  Q
    ||||||||||||||||||| |||| | |||||||| |||||  ||||||||||||    
T  28226462 caaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaa 28226516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31740305 - 31740379
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| |||||||||||||||||||||| |||  | |||||| | ||| | |||||||||||||  |||||||    
T  31740305 atttatgggaccaaattgagacactttatagttaagggaccaaattgaaaacaaaaaataagttaaaggaccaaa 31740379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 293675 - 293764
Alignment:
Q  3 ttatgagaccaaattgagacactttataatta-gagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaaccaa 91  Q
    ||||||||||||||||| |||||||||||||| |||| | ||   ||||   |||||||| |||||||||||||| ||| ||||| ||||    
T  293675 ttatgagaccaaattgaaacactttataattaggagatcaaattgaaaacaaaaaaataaattaagagaccaaataatatattaagccaa 293764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 12203306 - 12203370
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||| ||||||||||||||| |||| | ||| || |||||||| ||||  ||||||||||||||    
T  12203306 ttatgggaccaaattgagacagtttaaagttaaaggaccaaaatgaaattcaaaaataagttaag 12203370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 13176373 - 13176441
Alignment:
Q  8 agaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaat 76  Q
    |||||||||||||||| |||||| |||| | || |||||||||||  ||||| | ||||| ||||||||    
T  13176373 agaccaaattgagacattttatagttaggggactaaaataaaatccgaaaatgaattaagggaccaaat 13176441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 17916504 - 17916576
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||||||| |||| | |||  | |||||||| ||||  |||||||||||||| |||||||    
T  17916504 ttatgtgaccaaattgagacagtttaaagttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa 17916576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 13568484 - 13568552
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||||||||| |||||||    
T  13568484 gagaccaaattgaaacactttataaatagggaatcaaaataaaatctaaaaataagttaagggaccaaa 13568552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 25787197 - 25787275
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||||||||||||||||||||||||||| |||| | |||||| | ||| | |||||||||||||| |||||||||||    
T  25787197 atttatgagaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgat 25787275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 26056180 - 26056254
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| |||||||||||||||||||||| |||| | |||||||| ||||| |||||||||||||| |||||||    
T  26056180 atttatgggaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaaataagttaagggaccaaa 26056254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 52741556 - 52741486
Alignment:
Q  16 ttgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    ||||||||||||||| |||||| |||||||||||| | |||||||||||||| |||||||||||| |||||    
T  52741556 ttgagacactttatagttagaggaccaaaataaaaacgaaaaataagttaagggaccaaatgatatattaa 52741486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 13930710 - 13930786
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| |||||||||||||||||||||| |||||| |||||| | ||| | |||||||||||||| |||||||||||    
T  13930710 ttatgggaccaaattgagacactttatagttagaggaccaaattgaaaaccaaaaataagttaagggaccaaatgat 13930786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 49139884 - 49139796
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaacc 89  Q
    |||||||||||||||||||||||||||||| |||  | |||||||  ||| | |||||||||||||| |||||||||||  ||||||||    
T  49139884 atttatgagaccaaattgagacactttatagttatgggaccaaaacgaaaaccaaaaataagttaagggaccaaatgatgtattaaacc 49139796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 50679856 - 50679928
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| |||||||||||||||||||||| |||  | |||||||||||| |||||||||||||||| |||||||    
T  50679856 ttatgggaccaaattgagacactttatagttaagggaccaaaataaaaactaaaaataagttaagggaccaaa 50679928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 51424328 - 51424260
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||||||||||||  | |||||||| ||||| |||||||||||||| |||||||    
T  51424328 gagaccaaattgagacactttataattaagggaccaaaatgaaatccaaaaataagttaagggaccaaa 51424260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 34531740 - 34531653
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaaccaatta 94  Q
    ||||||||||||||||| |||||| |||||| |||||||| |||||  ||||||||||||| |||||||  ||  |||||||||||||    
T  34531740 gagaccaaattgagacattttatagttagaggaccaaaatgaaatccgaaaataagttaagggaccaaagcatgtattaaaccaatta 34531653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 1061403 - 1061337
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| || | | ||||||||||||||| ||||||||||||| |||||||    
T  1061403 gaccaaattgagacactttatagtttggggaccaaaataaaatctgaaaataagttaagcgaccaaa 1061337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 20953363 - 20953297
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||||||||| |||||||    
T  20953363 gaccaaattgagacactttatagttatagaactaaaatgaaatccaaaaataagttaagggaccaaa 20953297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 25786051 - 25785973
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||||||||||||||||||| |||| | |||||| | ||| | |||||||||||||| |||||||||||    
T  25786051 atttatgggaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgat 25785973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 33941392 - 33941326
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||||||||| || |||||||||||||  |||||||||||||| |||||||    
T  33941392 gaccaaattgagacattttataattaaaggaccaaaataaaattcaaaaataagttaagggaccaaa 33941326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 48467344 - 48467266
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| ||||||||||||| |||||||||| |||| |||||||| | ||| | |||||||||||||| |||||||||||    
T  48467344 atttaagagaccaaattgaaacactttatagttagggaaccaaattgaaaacaaaaaataagttaagggaccaaatgat 48467266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 3979348 - 3979421
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaat 76  Q
    ||||| |||||||||||||||||||||| |||  | |||||||| ||||| |||||||||||||| ||||||||    
T  3979348 ttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaat 3979421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 3978125 - 3978049
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| || ||||||||||||||||||| ||| || |||||||| ||||  |||||||||||||| |||||||||||    
T  3978125 ttatgggatcaaattgagacactttatagttaaaggaccaaaatgaaattcaaaaataagttaagggaccaaatgat 3978049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 9119877 - 9119813
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagacca 73  Q
    |||||||||||||||||||||| |||||| |||||| |||||||  ||||||||||||| |||||    
T  9119877 gaccaaattgagacactttatagttagaggaccaaattaaaatccgaaaataagttaagggacca 9119813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 14071238 - 14071314
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| |||||||||||||||||||||| |||||| |||||| | ||| | |||||||| ||||| |||||||||||    
T  14071238 ttatgggaccaaattgagacactttatagttagaggaccaaattgaaaaccaaaaataaattaagggaccaaatgat 14071314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 14312850 - 14312783
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaat 76  Q
    ||||||||||||||||||||||  |||   |||||||||||||| |||||||||||||| ||||||||    
T  14312850 gaccaaattgagacactttatagctaggagaccaaaataaaatccaaaaataagttaagggaccaaat 14312783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 2236888 - 2236822
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  ||||||||||||| |||||||    
T  2236888 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 2236822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 14390341 - 14390267
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||  |||||||||||||| |||||| |||||| |||||||| ||||  |||||||||||||| |||||||    
T  14390341 atttatggaaccaaattgagacattttatagttagaggaccaaaatgaaattaaaaaataagttaagggaccaaa 14390267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 35683130 - 35683064
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  ||||||||||||| |||||||    
T  35683130 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 35683064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 47411481 - 47411559
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||||||||||||||||||| |||| ||||||||   ||| |  ||||||||||||| |||||||||||    
T  47411481 atttatgggaccaaattgagacactttatagttagggaaccaaatggaaaaccgaaaataagttaagggaccaaatgat 47411559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 48974447 - 48974513
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||| ||||||||||||||| |||| |||||||||| |||||  ||||||||||||| |||||||    
T  48974447 gaccaagttgagacactttatagttagggaaccaaaatgaaatccgaaaataagttaagggaccaaa 48974513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 40135372 - 40135436
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||| ||| ||||||||||| |||| | |||||| |||||||| ||||||||||||||||||||    
T  40135372 ttatgtgacaaaattgagacattttaaagttagaggaccaaaatgaaatctaaaaataagttaag 40135436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 47512119 - 47512191
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||||| |||| | |||  | |||||||| ||||  ||||||||||||||||||||||    
T  47512119 ttatgagaccaaattgagacagtttaaagttaagggaccaaaatgaaattcaaaaataagttaagagaccaaa 47512191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 1873898 - 1873953
Alignment:
Q  12 caaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||||||||||||||||| |||| | ||||||||||||| | |||||||||||||    
T  1873898 caaattgagacactttatagttaggggaccaaaataaaatttgaaaataagttaag 1873953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 2973049 - 2973128
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaac 88  Q
    ||||||||||||||||||||||||||  | || ||||| ||| | |||||||||||||| || ||||| ||| |||||||    
T  2973049 gaccaaattgagacactttataattaagggactaaaatgaaaacaaaaaataagttaagggatcaaataatatattaaac 2973128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 21277077 - 21277002
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaat 76  Q
    ||||||| ||||||||||||| |||||||| ||||  ||||||| | ||| | |||||||||||||| ||||||||    
T  21277077 atttatgggaccaaattgagatactttatagttaggcaaccaaattgaaaaccaaaaataagttaagggaccaaat 21277002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 52181338 - 52181413
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaat 76  Q
    ||||||||||| |||||||||||||||||| |||||| |||||| | |||   |||||||||||||  ||||||||    
T  52181338 atttatgagactaaattgagacactttatagttagaggaccaaattgaaaataaaaaataagttaaaggaccaaat 52181413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 1061493 - 1061559
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||| |||||||||||| |||| | || ||||| ||||| ||||||||||||||||| ||||    
T  1061493 gaccaaattaagacactttatagttaggggactaaaatgaaatccaaaaataagttaagagagcaaa 1061559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 1898079 - 1898013
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||| | |||| |||||||| ||||||  |||||||||||||| |||||||    
T  1898079 gaccaaattgagacaatttaaagttagggaaccaaattaaaattcaaaaataagttaagggaccaaa 1898013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 2238019 - 2238085
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||  | |||||||| |||||  ||||||||||||| |||||||    
T  2238019 gaccaaattgagacactttatagttatgggaccaaaatgaaatccgaaaataagttaagggaccaaa 2238085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 13567237 - 13567175
Alignment:
Q  13 aaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||||||| |||  ||||| ||||| |||||||||||||  |||||||    
T  13567237 aaattgagacactttataattagggaattaaaatgaaatccaaaaataagttaaaggaccaaa 13567175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13641340 - 13641274
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||||| |||||||||||||||||||||| |||| | |||||| | ||| | ||||||||||||||    
T  13641340 atttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaag 13641274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 13929370 - 13929300
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||||||||||||||||||| |||  | |||||| | ||| | |||||||||||||| |||||||||||    
T  13929370 gaccaaattgagacactttatagttaagggaccaaattgaaaaccaaaaataagttaagggaccaaatgat 13929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 34532743 - 34532809
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | |||||||||||||   ||||||||||||  |||||||    
T  34532743 gaccaaattgagacactttatagttaggggaccaaaataaaattcgaaaataagttaaaggaccaaa 34532809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 48934316 - 48934258
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  |||||||||||||    
T  48934316 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaag 48934258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 48935151 - 48935209
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  |||||||||||||    
T  48935151 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaag 48935209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 9123442 - 9123506
Alignment:
Q  11 ccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||| |||||||||| |||  | ||||||||||||||  ||||||||||||| |||||||    
T  9123442 ccaaattgaaacactttatagttaagggaccaaaataaaatccgaaaataagttaagggaccaaa 9123506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 13642592 - 13642664
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| || |||| |||||||||||| |||||||| |||||||| ||| | |||||||||||||  |||||||    
T  13642592 ttatgggatcaaactgagacactttaaaattagaggaccaaaatgaaaaccaaaaataagttaaaggaccaaa 13642664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 26054980 - 26054916
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagtta 65  Q
    |||||||  |||||||||| |||||||||| |||| | |||||||| ||||| ||||||||||||    
T  26054980 atttatggaaccaaattgaaacactttatagttaggggaccaaaatgaaatccaaaaataagtta 26054916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 32823539 - 32823467
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||||||| |||| | |||  | |||||||||||||  |||||||||||||| |||||||    
T  32823539 ttatgggaccaaattgagacagtttaaagttaagggaccaaaataaaattcaaaaataagttaagggaccaaa 32823467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 33793847 - 33793767
Alignment:
Q  16 ttgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaaccaattatt 96  Q
    |||||||||||||||||||| | |||||| | ||| | |||||||||||||| || ||||||||  ||||| |||| ||||    
T  33793847 ttgagacactttataattaggggaccaaagtgaaaaccaaaaataagttaagggatcaaatgatgtattaagccaaatatt 33793767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 44340104 - 44340168
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagacca 73  Q
    ||||||| ||||||||||||||||||| | | |||||| ||||| ||||||||| |||| |||||    
T  44340104 gaccaaaatgagacactttataattaggggatcaaaatgaaatccaaaaataagataagggacca 44340168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 47411067 - 47410992
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaagagaccaaat 76  Q
    |||||||||||||||||||||||||||||| |||| | | |||| | |||||| |||||||| ||||| ||||||||    
T  47411067 atttatgagaccaaattgagacactttatagttaggggatcaaattgaaaatc-aaaaataatttaagggaccaaat 47410992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 9633849 - 9633770
Alignment:
Q  10 accaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaacc 89  Q
    ||||||||||||||||||||| |||  | |||||||| ||| | |||||||||||||  |||||||| ||  ||||||||    
T  9633849 accaaattgagacactttatagttaagggaccaaaatgaaaaccaaaaataagttaaaggaccaaattatgtattaaacc 9633770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 32823576 - 32823639
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaa 66  Q
    ||||| ||||||||||||||| |||| | |||| | |||||||||||||  |||||||||||||    
T  32823576 ttatgggaccaaattgagacagtttaaagttaggggaccaaaataaaattcaaaaataagttaa 32823639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 42244576 - 42244513
Alignment:
Q  12 caaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||| |||||| ||| |  |||||||| ||||| |||||||||||||| |||||||    
T  42244576 caaattgagacattttatagttatatgaccaaaatgaaatccaaaaataagttaagggaccaaa 42244513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 42248346 - 42248401
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagtt 64  Q
    |||||||||||||||||||||| |||  | |||||||| ||||| |||||||||||    
T  42248346 gaccaaattgagacactttatagttatgggaccaaaatgaaatccaaaaataagtt 42248401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 16217515 - 16217457
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||| |||||  | |||| ||||| | ||||||||||||||    
T  16217515 gaccaaattgagacactttatagttagatgatcaaattaaaaaccaaaaataagttaag 16217457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 35684244 - 35684309
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||||| |||| | ||||||||||||||  ||||||||||||  |||||||    
T  35684244 gaccaaattgagaca-tttatagttaggggaccaaaataaaatccgaaaataagttaatggaccaaa 35684309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 47136720 - 47136798
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||||| ||||||||||||||||||||| |||| | ||| || | ||| | |||||||||||||  || ||||||||    
T  47136720 atttatgacaccaaattgagacactttatagttaggggacctaattgaaaaccaaaaataagttaatggatcaaatgat 47136798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 2971780 - 2971715
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaag 67  Q
    ||||| |||||||||||||||||||||| |||||| || ||| | |||||  ||||||||||||||    
T  2971780 ttatgggaccaaattgagacactttatagttagaggactaaagtgaaaataaaaaaataagttaag 2971715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 29264946 - 29264867
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaagagaccaaatgatacattaaacc 89  Q
    ||||||||| ||||| |||||| |||||| | |||| | |||||| |||||||||||||| |||||||||||| ||||||||    
T  29264946 gaccaaattaagacattttatagttagaggatcaaattgaaaatc-aaaaataagttaag-gaccaaatgatatattaaacc 29264867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 39193662 - 39193589
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaat 76  Q
    ||||| || |||||||||||| |||| | |||  | |||||||||||||  |||||||||||||| ||||||||    
T  39193662 ttatgggatcaaattgagacagtttaaagttaagggaccaaaataaaattaaaaaataagttaagggaccaaat 39193589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 20171197 - 20171269
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||||||| |||| | |||  | |||||||||||||  |||||||||||||  |||||||    
T  20171197 ttatgggaccaaattgagacagtttaaagttaagggaccaaaataaaattcaaaaataagttaaaggaccaaa 20171269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 27114764 - 27114692
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||||||  |||| |||||  | |||||||||||||  ||||||||||| || |||||||    
T  27114764 ttatgggaccaaattgagacgatttaaaattaagggaccaaaataaaattcaaaaataagttgagggaccaaa 27114692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 28309843 - 28309771
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||||  |||| | |||  | |||||||| ||||  |||||||||||||| |||||||    
T  28309843 ttatgagaccaaattgagacggtttaaagttaagggaccaaaatgaaattaaaaaataagttaagggaccaaa 28309771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 31859667 - 31859600
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||| ||| |||||||| |||| || | ||||| ||||| |||||||||||||| |||||||    
T  31859667 gagaccaaattaagatactttatagttagggatc-aaaatgaaatccaaaaataagttaagtgaccaaa 31859600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 33850347 - 33850311
Alignment:
Q  39 accaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||| |||||||||||||| |||||||    
T  33850347 accaaaataaaatccaaaaataagttaagggaccaaa 33850311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 33943631 - 33943667
Alignment:
Q  39 accaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||| |||||||||||||| |||||||    
T  33943631 accaaaataaaatccaaaaataagttaagggaccaaa 33943667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 47511448 - 47511376
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||||||| |||| |||||  | | |||||| ||||  |||||||||||||| |||||||    
T  47511448 ttatgggaccaaattgagacagtttaaaattaagggatcaaaatgaaattcaaaaataagttaagggaccaaa 47511376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 39934 - 40009
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaat 76  Q
    ||||||| |||||||||||||||||||||| |||| | |||||| | ||||| |||||||||||||||||||||||    
T  39934 atttatgggaccaaattgagacactttatacttaggggaccaaagtgaaatccaaaaataagttaagagaccaaat 40009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 41867949 - 41868044
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaaccaattatt 96  Q
    ||||||| |||||||||||||||||||||| |||| | |||||| | ||| |||||||||| ||||| |||||||||||  ||||| |||||||||    
T  41867949 atttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaactaaaaataaattaagggaccaaatgatgtattaagccaattatt 41868044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 43275831 - 43275755
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| ||| |||||||||||||||||| |||| |||||||| | ||| | ||||||||||||||||||||||||||    
T  43275831 ttatgggactaaattgagacactttatagttagggaaccaaattgaaaacaaaaaataagttaagagaccaaatgat 43275755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 14820276 - 14820198
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||| |||||||||||||||||| |||| | |||||| ||||||| |||||||||||||| |||||| ||||    
T  14820276 atttatgggactaaattgagacactttatagttaggggaccaaattaaaatccaaaaataagttaagggaccaattgat 14820198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 7796842 - 7796935
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaaccaattatt 96  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||||   ||||||||||||||  ||||||  ||| |||||| | ||||||    
T  7796842 ttatgagaccaaattgagacactttataattagatgatcaaaataaaaataaaaaataagttaaggaaccaaagcatatattaaatctattatt 7796935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37274970 - 37274905
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaa 66  Q
    ||||||| || ||||||||||||||||||| |||||| |||||||| ||||| |||||||||||||    
T  37274970 atttatgggaacaaattgagacactttatagttagaggaccaaaatgaaatccaaaaataagttaa 37274905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 24068411 - 24068339
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| |||||||||||||||||||||| |||| | |||||||| ||| | |||||||||||||| |||||||    
T  24068411 ttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagggaccaaa 24068339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 37472484 - 37472408
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| |||||||||||||||||||||| |||||| |||||| ||||| | |||||||||||||  ||| |||||||    
T  37472484 ttatgggaccaaattgagacactttatagttagaggaccaaattaaaaaccaaaaataagttaaaggacgaaatgat 37472408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38591040 - 38591118
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||||||||||||||||||| |||| | |||||| | |||||| |||||||||||||| |||||||||||    
T  38591040 atttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatc-aaaaataagttaagggaccaaatgat 38591118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 6843830 - 6843772
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||| |||| | ||||||||||||||  |||||||||||||    
T  6843830 gaccaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaag 6843772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 6844614 - 6844680
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||  |||| |||||||||| |||||  ||||||||||||| |||||||    
T  6844614 gaccaaattgagacactttattgttagggaaccaaaatgaaatccgaaaataagttaagggaccaaa 6844680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 21267239 - 21267173
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||||| |||||| | ||| | |||||||||||||| |||||||    
T  21267239 gaccaaattgagacactttatagttagaggaccaaagtgaaaaccaaaaataagttaagcgaccaaa 21267173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 29739676 - 29739754
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||||||||||||||||||| |||| | | |||| | ||| | |||||||| |||||||||||||||||    
T  29739676 atttatgggaccaaattgagacactttatagttaggggatcaaattgaaaaccaaaaataaattaagagaccaaatgat 29739754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31623989 - 31623911
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||||||||||| |||||||||| |||| | |||||| | ||| | |||||||||||||| |||||||||||    
T  31623989 atttatgggaccaaattgaaacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgat 31623911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31625417 - 31625483
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||||| ||||||||||||||||||||||||||| | |||||| | ||| | ||||||||||||||    
T  31625417 atttatgggaccaaattgagacactttataattaggggaccaaattgaaaaccaaaaataagttaag 31625483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 36756147 - 36756069
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||||| ||||| |||||||||| |||  | |||||| ||||| |||||||||||||||| |||||||||||    
T  36756147 atttatgtgaccagattgaaacactttatagttatgggaccaaattaaaaactaaaaataagttaagggaccaaatgat 36756069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 38589903 - 38589826
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||||||||| ||||||||| |||||| |||||| | ||| | |||||||||||||| |||||||||||    
T  38589903 atttatgggaccaaattgagccactttatagttagaggaccaaattgaaaac-aaaaataagttaagggaccaaatgat 38589826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 16363845 - 16363930
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    ||||||| || |||||||||| |||||||| |||||| |||||| | ||| | |||||||||||||| |||||||| ||| |||||    
T  16363845 atttatgggatcaaattgagatactttatagttagaggaccaaagtgaaaaccaaaaataagttaagggaccaaattatatattaa 16363930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 7816123 - 7816187
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||||||||| |||||  | ||||||||||   ||||||||||||||    
T  7816123 ttatgagaccaaattgagacactttatagttagatgatcaaaataaaaataaaaaataagttaag 7816187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 19913573 - 19913501
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||| |||||||||| |||||| |||||| | ||||  |||||||||||||| |||||||    
T  19913573 ttatgggaccaaattgaaacactttatagttagaggaccaaattgaaattcaaaaataagttaagggaccaaa 19913501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 39515280 - 39515208
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||||||||| | || | | |||||| ||| | |||||||||||||| |||||||    
T  39515280 ttatgagaccaaattgagacactttatagtcaggggatcaaaatgaaaaccaaaaataagttaagggaccaaa 39515208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 8395069 - 8395022
Alignment:
Q  39 accaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    |||||||||||| | ||||||||||||||||||||||||||| |||||    
T  8395069 accaaaataaaaaccaaaaataagttaagagaccaaatgatatattaa 8395022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 10052179 - 10052097
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaagagaccaaatgatacattaaaccaa 91  Q
    |||||| |||||||||||||||||||| | |||||| | |||||| || ||||||||||| |||||||||||| ||||| ||||    
T  10052179 gaccaatttgagacactttataattaggggaccaaagtgaaaatc-aagaataagttaagggaccaaatgatatattaagccaa 10052097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 45385838 - 45385901
Alignment:
Q  12 caaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||| ||||||||||||||  | |||||||| ||||| |||||||||||||| |||||||    
T  45385838 caaattgaaacactttataattatgggaccaaaatgaaatccaaaaataagttaagggaccaaa 45385901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 36940066 - 36940144
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||||| |||||||||| |||||||||| |||| | | |||| | ||| | |||||||||||||| |||||||||||    
T  36940066 atttatgataccaaattgaaacactttatagttaggggatcaaagtgaaaaccaaaaataagttaagggaccaaatgat 36940144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 37323431 - 37323353
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| || |||||||||||| |||||| |||| |||||||| | ||| | |||||||| ||||| |||||||||||    
T  37323431 atttatgggatcaaattgagacattttatagttagggaaccaaattgaaaaccaaaaataaattaagggaccaaatgat 37323353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 37324721 - 37324787
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||| |||||||||||||||||| |||||| |||| | |||||| ||||| | ||||||||||||||    
T  37324721 atttttgagaccaaattgagacattttatagttaggggaccaaattaaaaaccaaaaataagttaag 37324787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 43277962 - 43278039
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    ||||||||||||||| |||||| |||| | |||||| |||||   |||||||||||||| || ||||||||| |||||    
T  43277962 gaccaaattgagacattttatagttaggggaccaaattaaaaataaaaaataagttaagggatcaaatgatatattaa 43278039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 38066 - 37994
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| | |||||||||| |||| | || ||||| ||| | |||||||||||||| |||||||    
T  38066 ttatgagaccaaattcaaacactttatagttaggggactaaaattaaaacaaaaaataagttaagggaccaaa 37994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 24069481 - 24069553
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| |||||||||||||||||||||| |||  | | |||||| ||| | |||||||||||||| |||||||    
T  24069481 ttatgggaccaaattgagacactttatagttaagggatcaaaatgaaaaccaaaaataagttaagggaccaaa 24069553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 43386737 - 43386813
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| ||||||||||||||| |||||| |||| | |||||| | ||| | |||||||||||||| ||||| |||||    
T  43386737 ttatgggaccaaattgagacattttatagttaggggaccaaactgaaaaccaaaaataagttaagggaccatatgat 43386813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 4675833 - 4675750
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    ||||| ||||||||||||||| |||| | |||  | |||||||||||||  ||||||||||||||  ||||||| ||| |||||    
T  4675833 ttatgggaccaaattgagacaatttaaagttaagggaccaaaataaaattcaaaaataagttaaggaaccaaatcatatattaa 4675750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 35943991 - 35943916
Alignment:
Q  1 atttatgagaccaaattgagacacttt-ataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| ||||||||||||||| ||| |||||||  | |||||||| ||| | |||||||||||||| |||||||    
T  35943991 atttatgggaccaaattgagacatttttataattaagggaccaaaatgaaaaccaaaaataagttaagggaccaaa 35943916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 117131 - 117065
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||||| || |||||||| ||| ||||||||||| | |||||||| ||| | ||||||||||||||    
T  117131 atttatgggatcaaattgaaacattttataattaggggaccaaaatgaaaaccaaaaataagttaag 117065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 3237500 - 3237427
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| ||||||||||||||| |||| | |||| | |||||| | ||||| |||||||||||||| |||||||    
T  3237500 atttatgggaccaaattgagacagtttaaagttaggggaccaaa-tgaaatccaaaaataagttaagggaccaaa 3237427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 4810169 - 4810234
Alignment:
Q  13 aaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||||||| |||||||||| || |||||| ||||| | |||||||||||||| ||| |||||||    
T  4810169 aaattgagacattttataatta-aggaccaaattaaaaaccaaaaataagttaagggacgaaatgat 4810234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 7815117 - 7815060
Alignment:
Q  10 accaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaag 67  Q
    |||||||||||||| ||||||||||||| |||||||| |||||| |||||||| |||||    
T  7815117 accaaattgagacattttataattagaggaccaaaatgaaaatc-aaaaataatttaag 7815060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 13360428 - 13360362
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||| |||||||  ||| ||||||| | || ||||| |||||||||||||||||||| |||||||    
T  13360428 gaccaatttgagacgttttttaattaggggacgaaaatgaaatctaaaaataagttaagggaccaaa 13360362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 29441687 - 29441625
Alignment:
Q  13 aaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||| |||| | |||  | |||||||||||||  ||||||||||||||||||||||    
T  29441687 aaattgagacagtttaaagttaagggaccaaaataaaattcaaaaataagttaagagaccaaa 29441625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 36070261 - 36070183
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| || ||||||||||||||||||| |||| | |||||| | ||| | |||||||| ||||| || ||||||||    
T  36070261 atttatgggatcaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataaattaagggatcaaatgat 36070183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39546710 - 39546776
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||||| |||||||||||||||||||| | |||| |||||||| | ||| |  |||||||||||||    
T  39546710 atttatgggaccaaattgagacactttaaagttagggaaccaaagtgaaaacagaaaataagttaag 39546776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 3612618 - 3612690
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagaga-accaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||||||| |||| | ||| ||| |||||||||||||  |||||||||||||| |||||||    
T  3612618 ttatgggaccaaattgagacaatttaaagtta-agagaccaaaataaaattcaaaaataagttaagggaccaaa 3612690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 7770932 - 7770996
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||||||||||||||| |||||||||| |||||  | |||||| |||   ||||||||||||||    
T  7770932 ttatgagaccaaattgaaacactttatagttagatgatcaaaatgaaaataaaaaataagttaag 7770996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 15989085 - 15989013
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||||||  |||| | |||  | |||||||| |||| ||||||||||||||| |||||||    
T  15989085 ttatgggaccaaattgagacggtttaaagttaagggaccaaaatgaaatttaaaaataagttaagggaccaaa 15989013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 56741 - 56811
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||||||||||||||||||||||| | |||||| | ||||| |||||||||||||| |||||||||||    
T  56741 gaccaaattgagacactttataattaggggaccaaagtgaaatcaaaaaataagttaagggaccaaatgat 56811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 54674 - 54596
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||||||||||||||||||||||| || |||||||||||| | |||| || |||||| | |||||||||    
T  54674 atttatgggaccaaattgagacactttataattaaaggaccaaaataaaaaccaaaattacgttaaggggccaaatgat 54596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 7e-18; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12854137 - 12854211
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| |||||||||||||||||||||| |||  | |||||||| |||||||||||||||||||| |||||||    
T  12854137 atttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatctaaaaataagttaagggaccaaa 12854211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 10477419 - 10477351
Alignment:
Q  7 gagaccaaattgagacactttataattagaga-accaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||    
T  10477419 gagaccaaattgagacactttataatta-agagaccaaaatgaaatccaaaaataagttaagagaccaaa 10477351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 7038367 - 7038443
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| |||||||||||||||||||||| |||  | |||||||| ||||| |||||||||||||| |||||||||||    
T  7038367 ttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgat 7038443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 3254931 - 3254865
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||| ||||||||| |||||||||| |||||  ||||||||||||| |||||||    
T  3254931 gaccaaattgagacactctataattagggaaccaaaatgaaatccgaaaataagttaagggaccaaa 3254865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6707009 - 6706935
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||  ||||||||||||||||||||| |||| | |||||||| ||||| |||||||||||||| |||||||    
T  6707009 atttatggaaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaaataagttaagggaccaaa 6706935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 12852969 - 12852895
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| |||||||||||||||||||||| |||| | |||||||| ||||| |||| ||||||||| |||||||    
T  12852969 atttatgggaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaagtaagttaagggaccaaa 12852895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 33837800 - 33837862
Alignment:
Q  13 aaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||| |||| | ||||||||||||||| ||||||||||||| |||||||    
T  33837800 aaattgagacactttatagttaggggaccaaaataaaatctgaaaataagttaagggaccaaa 33837862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 12958499 - 12958415
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    ||||||| |||||||||||||||||||||| |||| | | |||| ||||| | ||||||||||||||| ||||||||||| |||||    
T  12958499 atttatgggaccaaattgagacactttatagttaggggatcaaattaaaaaccaaaaataagttaaga-accaaatgatatattaa 12958415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 4630123 - 4630183
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||||| |||| | |||||||| |||||| |||||||||||||    
T  4630123 gagaccaaattgagacactttatagttaggggaccaaaatgaaatctgaaaataagttaag 4630183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 5564134 - 5564068
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||||||||||  | |||||||| ||||  |||||||||||||| |||||||    
T  5564134 gaccaaattgagacactttataattaagggaccaaaatgaaattcaaaaataagttaagggaccaaa 5564068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 5565186 - 5565252
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||||||||||  | |||||||| ||||  |||||||||||||| |||||||    
T  5565186 gaccaaattgagacactttataattaagggaccaaaatgaaattcaaaaataagttaagggaccaaa 5565252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 42368343 - 42368415
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaat 76  Q
    ||||| |||||||| ||||||||||||| |||| | |||||||| ||||| |||||||||||||| ||||||||    
T  42368343 ttatgggaccaaatcgagacactttatagttaggggaccaaaatgaaatccaaaaataagttaag-gaccaaat 42368415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2583579 - 2583643
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagtta 65  Q
    |||||||||||||||||||||||||||||| |||| | || ||| ||||| | ||||||||||||    
T  2583579 atttatgagaccaaattgagacactttatagttaggggacaaaattaaaaaccaaaaataagtta 2583643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 42028993 - 42029069
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| |||||||| ||||||||||||| |||||  |||||||| ||| | ||||||| |||||| |||||||||||    
T  42028993 ttatgggaccaaatcgagacactttatagttagatgaccaaaatgaaaaccaaaaatacgttaagggaccaaatgat 42029069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 3666309 - 3666376
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaat 76  Q
    |||||||||||||||||||||| |||  | |||||||| |||||  ||||||||||||| ||||||||    
T  3666309 gaccaaattgagacactttatagttatgggaccaaaatgaaatccgaaaataagttaagggaccaaat 3666376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 4628954 - 4628899
Alignment:
Q  12 caaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||| ||||||||  ||||| |||||||||||||| ||||||||||||||    
T  4628954 caaattgagatactttatatatagaggaccaaaataaaatccaaaaataagttaag 4628899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 6209099 - 6209162
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaa 66  Q
    ||||| ||||||||| |||||||||||| |||||  |||||||| ||||| |||||||||||||    
T  6209099 ttatgggaccaaattaagacactttatagttagatgaccaaaatgaaatccaaaaataagttaa 6209162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23177757 - 23177678
Alignment:
Q  1 atttatgagaccaaattgagacactttataatta-gagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||||||||||||||||||| ||| | | |||||||| ||| | |||||||| ||||| |||||||||||    
T  23177757 atttatgggaccaaattgagacactttatagttagggggaccaaaatgaaaaccaaaaataaattaagggaccaaatgat 23177678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23589014 - 23588935
Alignment:
Q  1 atttatgagaccaaattgagacactttataatta-gagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||||||||||||||||||| ||| | | |||||||| ||| | |||||||| ||||| |||||||||||    
T  23589014 atttatgggaccaaattgagacactttatagttagggggaccaaaatgaaaaccaaaaataaattaagggaccaaatgat 23588935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 34039344 - 34039261
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||  ||   ||||||||||||||| || |||||||| |||||    
T  34039344 ttatgagaccaaattaagatactttatagttagagaagcaaaatggaaataaaaaataagttaagaaactaaatgatatattaa 34039261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 42027276 - 42027202
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||| ||||||||||||||| ||| || |||||| |||||||| |||||| |||||||||||||| |||||||    
T  42027276 atttatgggaccaaattgagacattttgtagttagaggaccaaaatgaaaatc-aaaaataagttaagggaccaaa 42027202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 1625017 - 1625074
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||| |||||| | |||||| ||||| ||||||||||||||    
T  1625017 gaccaaattgagacactttatagttagag-atcaaaatgaaatccaaaaataagttaag 1625074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 2305615 - 2305557
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||| |||| | | |||||| ||||| ||||||||||||||    
T  2305615 gaccaaattgagacactttatagttaggggatcaaaatgaaatccaaaaataagttaag 2305557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 3665299 - 3665233
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||| ||| |||||| |||||| |||||||| |||||  ||||||||||||| |||||||    
T  3665299 gaccaaattgaaacattttatagttagaggaccaaaatgaaatccgaaaataagttaagggaccaaa 3665233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 15268456 - 15268390
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||||| |||  | | |||||| ||||| ||||||||||||||||||||||    
T  15268456 gaccaaattgagacattttatagttaagggatcaaaatcaaatccaaaaataagttaagagaccaaa 15268390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 33836844 - 33836786
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||| |||| | |||||||| |||||  |||||||||||||    
T  33836844 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaag 33836786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 37867831 - 37867761
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||||||||||||||||||| |||| | | |||| | ||| | |||||||||||||| |||||||||||    
T  37867831 gaccaaattgagacactttatagttaggggatcaaattgaaaaccaaaaataagttaagggaccaaatgat 37867761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 3255917 - 3255977
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||||||||||| |||||||||| |||| | |||||||| |||||  |||||||||||||    
T  3255917 gagaccaaattgaaacactttatagttaggggaccaaaatgaaatccgaaaataagttaag 3255977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 27264608 - 27264680
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||||||| |||| | |||  | |||||||| ||||  ||||||||||||||||||||||    
T  27264608 ttatgggaccaaattgagacaatttaaagttaagggaccaaaatgaaattcaaaaataagttaagagaccaaa 27264680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 35799593 - 35799529
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||||||||| |||| | || ||| | ||| | ||||||||||||||    
T  35799593 ttatgagaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaag 35799529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 41312577 - 41312509
Alignment:
Q  7 gagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||||||| |||||| | |||||| |||||  ||||||||||||  |||||||    
T  41312577 gagaccaaattgagatactttatagttagaggaacaaaatgaaatccgaaaataagttaatggaccaaa 41312509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 41313311 - 41313374
Alignment:
Q  12 caaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||| |||||||||||| |||| | |||||||||||||   ||||||||||||| |||||||    
T  41313311 caaattcagacactttatagttaggggaccaaaataaaattcgaaaataagttaagggaccaaa 41313374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 41795993 - 41796063
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||||||||||||||||||| |||| | | |||||| |||||| |||||||||||||| ||| |||||||    
T  41795993 gaccaaattgagacactttatagttaggggatcaaaatgaaaatc-aaaaataagttaagggactaaatgat 41796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 2306702 - 2306767
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||| | |||| | |||||||| |||||  ||||||||||||| |||||||    
T  2306702 gaccaaattgagacactttacagttaggggaccaaaatgaaatc-caaaataagttaagggaccaaa 2306767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 2581886 - 2581808
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||||||||||||||||||| |||| | | |||| | ||| | ||||||||||||   |||||||||||    
T  2581886 atttatgggaccaaattgagacactttatagttaggggatcaaattgaaaaccaaaaataagttagaggaccaaatgat 2581808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 14482132 - 14482198
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||| ||||| | |||  |||||||||| ||||  |||||||||||||| |||||||    
T  14482132 gaccaaattgagacgctttaaagttaaggaaccaaaatgaaattcaaaaataagttaagggaccaaa 14482198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 17179135 - 17179069
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||| | |||| | |||||| ||||||  |||||||||||||| |||||||    
T  17179135 gaccaaattgagacagtttaaagttaggggaccaaattaaaattcaaaaataagttaagggaccaaa 17179069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 21010542 - 21010612
Alignment:
Q  16 ttgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaa 86  Q
    ||||||||||||||| ||||   || ||||||||| | |||||||||||||| || ||||||||| |||||    
T  21010542 ttgagacactttatagttaggagactaaaataaaaacaaaaaataagttaagggatcaaatgatatattaa 21010612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 23178915 - 23178993
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||| || | ||| |||||| |||| | |||||| | ||| |||||||||||||||| |||||||||||    
T  23178915 atttatgggaccaatttaaaacagtttatagttaggggaccaaagtgaaaactaaaaataagttaagggaccaaatgat 23178993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 23590172 - 23590250
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||| || | ||| |||||| |||| | |||||| | ||| |||||||||||||||| |||||||||||    
T  23590172 atttatgggaccaatttaaaacagtttatagttaggggaccaaagtgaaaactaaaaataagttaagggaccaaatgat 23590250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 29424653 - 29424719
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||| |||||||||| |||| | |||||  ||||| | |||||||||||||| |||||||    
T  29424653 gaccaaattgaaacactttatagttaggggaccaatgtaaaaaccaaaaataagttaagggaccaaa 29424719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 10368418 - 10368506
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaagagaccaaatgatacattaaacc 89  Q
    ||||||| || ||||||||||||||||||| |||| | | |||| | |||||| |||||||| ||||| |||||||||||  ||||||||    
T  10368418 atttatgggatcaaattgagacactttatagttaggggatcaaattgaaaatc-aaaaataaattaagggaccaaatgatgtattaaacc 10368506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 14573854 - 14573915
Alignment:
Q  14 aattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||| |||| | |||||||| ||||| ||||||| |||||| |||||||    
T  14573854 aattgtgacactttatagttaggggaccaaaatgaaatccaaaaatatgttaagggaccaaa 14573915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 37869075 - 37869147
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||| |||||||||||||||||| |||  | |||||| | |||||| |||||||||||||| |||||||    
T  37869075 ttatgagactaaattgagacactttatagttaagggaccaaattgaaaatc-aaaaataagttaagggaccaaa 37869147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 7037047 - 7036971
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| ||||||||||| |||||||||| |||  | || ||| | ||||| |||||||||||||  |||||||||||    
T  7037047 ttatgggaccaaattgaaacactttatagttaagggactaaagtgaaatccaaaaataagttaaaggaccaaatgat 7036971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 11386706 - 11386642
Alignment:
Q  2 tttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaa 66  Q
    |||||| || |||||||| |||||||||| |||  | |||||| ||||| |||||||||||||||    
T  11386706 tttatgggatcaaattgaaacactttatagttaagggaccaaattaaaaactaaaaataagttaa 11386642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 15650524 - 15650436
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgatacattaaacc 89  Q
    ||||| || ||||||||||||||||||||| |||| | |||||| ||| |   |||||||||||||| || |||| |||  ||||||||    
T  15650524 atttaagataccaaattgagacactttatagttaggggaccaaattaacaatgaaaaataagttaagggatcaaacgatgtattaaacc 15650436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 15816701 - 15816773
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||||||| |||| | |||  | || ||||| ||||  ||||||||||||||||||||||    
T  15816701 ttatgggaccaaattgagacagtttaaagttaagggacgaaaatgaaattcaaaaataagttaagagaccaaa 15816773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 42246672 - 42246600
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| || |||||||| ||||||||||||||| | | |||||| ||| | ||||| |||||||| |||||||    
T  42246672 ttatgggatcaaattgaaacactttataattaggggatcaaaatgaaaaccaaaaacaagttaagggaccaaa 42246600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 43015620 - 43015548
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||||||| |||| | |||  | |||||||| ||||  |||||||||||||| |||||||    
T  43015620 ttatgggaccaaattgagacagtttaaagttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa 43015548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 5245 - 5178
Alignment:
Q  8 agaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||||||| |||| | ||||||| |||||| |||||||||||||| |||||||    
T  5245 agaccaaattgagacactttatagttaggggaccaaaagaaaatccaaaaataagttaagggaccaaa 5178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 1830 - 1764
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||||||||||||||| | |||||||| |||||  ||||||||||||| |||||||    
T  1830 gaccaaattgagacactttataattaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 1764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 2300 - 2372
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||| ||||||||||| ||||||||||||||| | |||||||| ||| | |||||||||||||| |||||||    
T  2300 ttatgggaccaaattgaaacactttataattaggggaccaaaatgaaaaccaaaaataagttaagggaccaaa 2372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 1286 - 1229
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    ||||||||||||| ||||||||||||| | |||||||| ||| | ||||||||||||||    
T  1286 gaccaaattgagagactttataattaggggaccaaaatgaaa-ccaaaaataagttaag 1229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 661 - 739
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||| |||||||||||||||||| |||| | |||||| | | | | |||||||||||||| |||||||||||    
T  661 atttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaataagttaagggaccaaatgat 739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 613 - 535
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||| |||||||||||||||||| |||| | |||||| | | | | |||||||||||||| |||||||||||    
T  613 atttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaataagttaagggaccaaatgat 535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9511 - 9589
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||| |||||||||||||||||| |||| | |||||| | | | | |||||||||||||| |||||||||||    
T  9511 atttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaataagttaagggaccaaatgat 9589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 8462 - 8384
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| |||||| |||||||| |||||| |||| | | |||| | ||| | |||||||||||||| |||||||||||    
T  8462 atttatgggaccaatttgagacagtttatagttaggggagcaaagtgaaaaccaaaaataagttaagggaccaaatgat 8384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 25997 - 25931
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    |||||||||||||||||||||| |||| | |||||||| ||||   ||||||||||||| |||||||    
T  25997 gaccaaattgagacactttatagttaggggaccaaaatgaaattcgaaaataagttaagggaccaaa 25931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 26960 - 27014
Alignment:
Q  12 caaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaa 66  Q
    ||||||||||||||||||| |||| | |||||||| |||||  ||||||||||||    
T  26960 caaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaa 27014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1827 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1827
Description:

Target: scaffold1827; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 1100 - 1156
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaa 66  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||  ||||||||||||    
T  1100 gaccaaattgagacactttatagttagaggacc-aaataaaatccgaaaataagttaa 1156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 23487 - 23411
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||| ||||||||||||||| |||||| |||| | |||||| | ||| | |||||||||||||| ||||| |||||    
T  23487 ttatgggaccaaattgagacattttatagttaggggaccaaactgaaaaccaaaaataagttaagggaccatatgat 23411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 24856 - 24922
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||| ||||||||||||||| | |||||| | ||| | |||||||| ||||| |||||||    
T  24856 gaccaaattgaaacactttataattaggggaccaaactgaaaaccaaaaataaattaagggaccaaa 24922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 458501 - 458553
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataa 61  Q
    ||||||||| ||||||||||||||||| | ||||||||||||||  |||||||    
T  458501 gaccaaattaagacactttataattaggggaccaaaataaaatccgaaaataa 458553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 75813 - 75762
Alignment:
Q  16 ttgagacactttataattagagaaccaaaataaaatctaaaaataagttaag 67  Q
    |||||||||||||||||||||| |||||| ||||| | |||||||| |||||    
T  75813 ttgagacactttataattagaggaccaaagtaaaaacaaaaaataaattaag 75762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 77214 - 77292
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    ||||||| ||||||||||| || ||||||| ||||   |||||| | ||| | |||||||||||||||||| |||||||    
T  77214 atttatgggaccaaattgaaacgctttatagttaggagaccaaagtgaaaacaaaaaataagttaagagactaaatgat 77292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 548 - 626
Alignment:
Q  1 atttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaatgat 79  Q
    |||||||| ||||||||||||||||||||| |||| | ||| || | ||| | |||||||||||||  || ||||||||    
T  548 atttatgacaccaaattgagacactttatagttaggggacctaattgaaaaccaaaaataagttaatggatcaaatgat 626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 6606 - 6663
Alignment:
Q  10 accaaattgagacactttataattagagaaccaaaat-aaaatctaaaaataagttaag 67  Q
    |||||||||||||| ||||||||||||| |||||||| |||||| |||||||| |||||    
T  6606 accaaattgagacattttataattagaggaccaaaatgaaaatc-aaaaataatttaag 6663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 2085 - 2019
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||| | |||  | |||||||| |||||||||||||||| ||| |||||||    
T  2085 gaccaaattgagacaatttaaagttaagggaccaaaatgaaatctaaaaataagtcaagggaccaaa 2019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 20623 - 20689
Alignment:
Q  9 gaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaa 75  Q
    ||||||||||||||| |||| | |||| |||||||| ||||||  ||||||| |||||| |||||||    
T  20623 gaccaaattgagacagtttaaagttagggaaccaaattaaaattcaaaaatatgttaagggaccaaa 20689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 160 - 233
Alignment:
Q  3 ttatgagaccaaattgagacactttataattagagaaccaaaataaaatctaaaaataagttaagagaccaaat 76  Q
    ||||| ||||||||||||||  |||| |||||  | | |||||| |||| ||||||||||||||| ||||||||    
T  160 ttatgcgaccaaattgagacggtttaaaattaagggatcaaaattaaatttaaaaataagttaagggaccaaat 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University