View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16796_high_27 (Length: 260)
Name: NF16796_high_27
Description: NF16796
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16796_high_27 |
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Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 15 - 253
Target Start/End: Original strand, 2318923 - 2319161
Alignment:
| Q |
15 |
aactttaaggtagacagaaatttcatcaaaagcaaatgtaattcgaaacaacaataaatgacatatatattgattagattcgaaacataaagacagacaa |
114 |
Q |
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| T |
2318923 |
aactttaaggtagacagaaatttcatcgaaagcaaatgtaattcgaaacaacaataaatgacatatatattgattagattcgaaacataaagacagacaa |
2319022 |
T |
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| Q |
115 |
acaacataacaatctgatcttgatagaaaaagaggaagagttaattaattaattaagaaatgaagtatacttgaacttgaggggattcatcagaaggatt |
214 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2319023 |
acaacataagaatctgatcttgatagaaaaagaggaagagttaattaattaattaagaaatgaagtatacttgaacttgaggggattcatcagaaggatt |
2319122 |
T |
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| Q |
215 |
gtttgtggcggcattgatagtggagagagaagaagaaat |
253 |
Q |
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| T |
2319123 |
gtttgtggcggcattgatagtggagagagaagaagaaat |
2319161 |
T |
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