View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16796_low_24 (Length: 322)
Name: NF16796_low_24
Description: NF16796
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16796_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 11 - 306
Target Start/End: Complemental strand, 44493701 - 44493406
Alignment:
| Q |
11 |
caaaggtcttgatagagtgttccttcgcatgctgattgggctacttgaatgtggtttgtttggagtgttgctgctgttgctaattttgagaaattggtaa |
110 |
Q |
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| T |
44493701 |
caaaggtcttgatagagtgttccttcgcatgctgattgggctacttgaatgtggtttgtttggagtgttgctgctgttgctaattttgagaaattggtaa |
44493602 |
T |
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| Q |
111 |
ctgaaaatagtagaactaaaattgtggagagaattggcatgagagccagcaatgatgctgttttccctctcatggtaaaggagagaataattgtagttgt |
210 |
Q |
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| T |
44493601 |
ctgaaaatagtagaactaaaattgtggagagaattggcatgagagccagcaatgatgctgttttccctctcatggtaaaggagagaataattgtagttgt |
44493502 |
T |
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| Q |
211 |
gctggatctatgagatttagattataataattatagtgtgtttgagagtgggggtaattggcaatataaatatggtagttgagtgcataaatgaaa |
306 |
Q |
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| T |
44493501 |
gctggatctatgagatttagattataataattatagtgtttttgagagtgggggttattggcaatataaatatggtagttgagtgcataaatgaaa |
44493406 |
T |
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