View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16798_high_2 (Length: 801)

Name: NF16798_high_2
Description: NF16798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16798_high_2
NF16798_high_2
[»] chr2 (59 HSPs)
chr2 (477-788)||(36161230-36161553)
chr2 (1-225)||(36160829-36161053)
chr2 (587-713)||(15962150-15962279)
chr2 (307-387)||(36161150-36161230)
chr2 (587-713)||(39420679-39420808)
chr2 (587-694)||(33532729-33532839)
chr2 (587-713)||(15961793-15961922)
chr2 (8-118)||(36155106-36155219)
chr2 (587-713)||(936794-936923)
chr2 (587-713)||(11350180-11350309)
chr2 (599-694)||(10862063-10862161)
chr2 (587-713)||(11349786-11349915)
chr2 (587-713)||(32810869-32810998)
chr2 (598-693)||(3976475-3976573)
chr2 (586-692)||(17325173-17325282)
chr2 (589-713)||(14280262-14280389)
chr2 (598-693)||(11969054-11969152)
chr2 (587-694)||(28193568-28193678)
chr2 (587-713)||(4342251-4342379)
chr2 (598-692)||(43195787-43195884)
chr2 (601-693)||(21213892-21213987)
chr2 (598-693)||(3977007-3977105)
chr2 (598-693)||(21214205-21214303)
chr2 (598-693)||(23054328-23054426)
chr2 (598-693)||(25441698-25441796)
chr2 (599-693)||(6183371-6183468)
chr2 (587-694)||(17324015-17324124)
chr2 (588-694)||(28193329-28193438)
chr2 (598-691)||(42768338-42768432)
chr2 (600-687)||(883607-883697)
chr2 (587-694)||(10862307-10862417)
chr2 (598-693)||(43169244-43169342)
chr2 (638-697)||(4506087-4506146)
chr2 (596-693)||(7877846-7877946)
chr2 (598-687)||(17727412-17727504)
chr2 (598-687)||(20998993-20999085)
chr2 (598-687)||(33985775-33985865)
chr2 (599-686)||(27545121-27545211)
chr2 (598-687)||(3435490-3435582)
chr2 (604-693)||(3976163-3976257)
chr2 (598-687)||(12431906-12431998)
chr2 (587-697)||(32196908-32197019)
chr2 (598-687)||(34775365-34775457)
chr2 (598-687)||(40009982-40010074)
chr2 (587-695)||(14288921-14289031)
chr2 (632-693)||(30166120-30166181)
chr2 (611-694)||(10861851-10861937)
chr2 (672-713)||(15962009-15962050)
chr2 (598-693)||(18901868-18901966)
chr2 (587-694)||(44266301-44266411)
chr2 (598-687)||(884065-884157)
chr2 (598-687)||(19860045-19860137)
chr2 (598-671)||(38760321-38760398)
chr2 (598-662)||(883882-883950)
chr2 (599-687)||(16006985-16007076)
chr2 (598-654)||(30160367-30160427)
chr2 (601-685)||(33985982-33986069)
chr2 (598-690)||(39596710-39596805)
chr2 (599-662)||(29684043-29684110)
[»] chr1 (49 HSPs)
chr1 (587-713)||(17294960-17295089)
chr1 (587-713)||(29228430-29228559)
chr1 (587-713)||(4187507-4187635)
chr1 (587-713)||(29228657-29228786)
chr1 (585-713)||(45443203-45443333)
chr1 (591-713)||(51722235-51722361)
chr1 (587-713)||(33562120-33562249)
chr1 (579-697)||(12287846-12287968)
chr1 (598-693)||(19937047-19937145)
chr1 (598-693)||(28509391-28509489)
chr1 (587-713)||(30604453-30604582)
chr1 (587-713)||(45858638-45858766)
chr1 (598-697)||(18585036-18585138)
chr1 (599-693)||(17419789-17419886)
chr1 (587-709)||(31411549-31411678)
chr1 (598-694)||(38474284-38474383)
chr1 (598-693)||(4022129-4022227)
chr1 (598-713)||(29383627-29383744)
chr1 (598-693)||(31305713-31305811)
chr1 (599-693)||(2697336-2697433)
chr1 (638-713)||(4187330-4187404)
chr1 (603-694)||(27958056-27958150)
chr1 (599-693)||(8520098-8520195)
chr1 (598-693)||(20735524-20735622)
chr1 (600-687)||(39649090-39649180)
chr1 (598-693)||(43423281-43423379)
chr1 (587-693)||(40642769-40642878)
chr1 (599-687)||(43361557-43361648)
chr1 (599-694)||(27957814-27957912)
chr1 (598-693)||(33879782-33879880)
chr1 (598-693)||(33964375-33964473)
chr1 (600-687)||(52846855-52846945)
chr1 (598-687)||(2997060-2997152)
chr1 (598-687)||(15392033-15392125)
chr1 (658-713)||(17294849-17294903)
chr1 (598-687)||(29273229-29273321)
chr1 (599-687)||(43361762-43361853)
chr1 (600-693)||(45264665-45264760)
chr1 (598-693)||(2104264-2104362)
chr1 (587-692)||(40521486-40521594)
chr1 (599-693)||(40664212-40664309)
chr1 (598-660)||(45403474-45403540)
chr1 (606-671)||(36326929-36326998)
chr1 (600-693)||(37600874-37600970)
chr1 (600-688)||(20735762-20735853)
chr1 (598-670)||(36332136-36332212)
chr1 (598-693)||(19481396-19481494)
chr1 (599-662)||(33342283-33342350)
chr1 (600-687)||(48558327-48558417)
[»] chr8 (41 HSPs)
chr8 (331-419)||(26039248-26039336)
chr8 (587-697)||(15711494-15711607)
chr8 (593-713)||(14019790-14019913)
chr8 (587-713)||(18464052-18464180)
chr8 (587-713)||(35908661-35908789)
chr8 (587-693)||(17607207-17607316)
chr8 (598-693)||(18905858-18905956)
chr8 (587-713)||(20232400-20232519)
chr8 (598-693)||(32931403-32931501)
chr8 (587-671)||(38287957-38288045)
chr8 (598-693)||(21085152-21085250)
chr8 (598-693)||(21653329-21653427)
chr8 (598-693)||(34248079-34248177)
chr8 (599-713)||(9595998-9596114)
chr8 (598-687)||(43599319-43599411)
chr8 (598-693)||(8276551-8276649)
chr8 (598-693)||(21653806-21653904)
chr8 (598-693)||(23027832-23027930)
chr8 (475-566)||(26039539-26039626)
chr8 (598-693)||(34248361-34248459)
chr8 (598-687)||(8559589-8559681)
chr8 (598-687)||(10989245-10989337)
chr8 (598-662)||(10989038-10989106)
chr8 (599-687)||(35561674-35561765)
chr8 (598-681)||(3183915-3184001)
chr8 (600-687)||(15011035-15011125)
chr8 (598-693)||(20298520-20298618)
chr8 (633-693)||(23027547-23027607)
chr8 (599-713)||(8605473-8605588)
chr8 (638-697)||(38287784-38287843)
chr8 (598-662)||(36997198-36997266)
chr8 (598-662)||(40902397-40902465)
chr8 (599-687)||(42228779-42228870)
chr8 (600-691)||(22277528-22277622)
chr8 (598-693)||(43984320-43984418)
chr8 (591-697)||(9596216-9596325)
chr8 (596-693)||(39588086-39588189)
chr8 (598-687)||(15010825-15010917)
chr8 (598-687)||(16454639-16454731)
chr8 (598-687)||(20760664-20760756)
chr8 (598-646)||(36993951-36994002)
[»] chr7 (53 HSPs)
chr7 (587-713)||(27585238-27585367)
chr7 (587-713)||(36495871-36496000)
chr7 (587-713)||(47346316-47346445)
chr7 (587-713)||(34748760-34748889)
chr7 (587-713)||(36495648-36495777)
chr7 (587-713)||(47346087-47346216)
chr7 (587-713)||(37756158-37756286)
chr7 (585-710)||(33909122-33909250)
chr7 (587-697)||(34914913-34915026)
chr7 (587-713)||(37755932-37756060)
chr7 (587-713)||(37761906-37762034)
chr7 (587-697)||(36270463-36270576)
chr7 (599-713)||(39549983-39550099)
chr7 (588-713)||(36270691-36270819)
chr7 (598-693)||(43384284-43384382)
chr7 (587-712)||(27729467-27729598)
chr7 (587-713)||(44314307-44314426)
chr7 (598-693)||(1663608-1663707)
chr7 (587-671)||(14991502-14991590)
chr7 (587-671)||(15421113-15421201)
chr7 (598-693)||(257271-257369)
chr7 (598-693)||(1661195-1661293)
chr7 (598-694)||(19843485-19843583)
chr7 (599-691)||(36092604-36092699)
chr7 (598-693)||(7135247-7135345)
chr7 (648-713)||(24240236-24240300)
chr7 (598-693)||(37530927-37531025)
chr7 (591-697)||(22206275-22206384)
chr7 (591-697)||(22228355-22228464)
chr7 (599-693)||(37272050-37272147)
chr7 (600-693)||(40121624-40121720)
chr7 (598-713)||(24240410-24240512)
chr7 (598-693)||(36092396-36092494)
chr7 (588-694)||(22686725-22686836)
chr7 (599-693)||(28910034-28910131)
chr7 (598-687)||(6783046-6783138)
chr7 (585-662)||(33909338-33909419)
chr7 (600-693)||(43167899-43167995)
chr7 (598-690)||(40121943-40122038)
chr7 (599-694)||(19843708-19843806)
chr7 (603-693)||(41670585-41670678)
chr7 (593-694)||(20296264-20296368)
chr7 (599-660)||(31374799-31374864)
chr7 (598-687)||(6782834-6782926)
chr7 (598-687)||(23396617-23396709)
chr7 (587-634)||(24240187-24240234)
chr7 (598-687)||(29252584-29252676)
chr7 (598-687)||(39808601-39808693)
chr7 (599-637)||(28910226-28910264)
chr7 (598-662)||(39808468-39808536)
chr7 (598-662)||(43288564-43288632)
chr7 (602-690)||(43383954-43384045)
chr7 (598-693)||(43288266-43288364)
[»] chr5 (54 HSPs)
chr5 (587-713)||(83804-83932)
chr5 (587-709)||(84027-84152)
chr5 (587-713)||(29396336-29396465)
chr5 (587-713)||(32395307-32395436)
chr5 (587-713)||(22196319-22196447)
chr5 (587-713)||(30329818-30329947)
chr5 (579-694)||(2471677-2471796)
chr5 (587-694)||(19439861-19439971)
chr5 (598-713)||(22196557-22196674)
chr5 (587-713)||(5095894-5096018)
chr5 (587-713)||(24792260-24792389)
chr5 (598-693)||(37995638-37995736)
chr5 (586-693)||(14769824-14769934)
chr5 (598-693)||(38131766-38131864)
chr5 (598-693)||(30588059-30588153)
chr5 (598-693)||(873700-873798)
chr5 (598-693)||(13843699-13843797)
chr5 (598-693)||(38663249-38663347)
chr5 (587-713)||(33040452-33040581)
chr5 (598-687)||(35526992-35527084)
chr5 (598-693)||(1028097-1028195)
chr5 (598-693)||(13844015-13844113)
chr5 (598-693)||(29432414-29432512)
chr5 (648-713)||(33040267-33040331)
chr5 (598-687)||(48108-48200)
chr5 (598-693)||(24994074-24994169)
chr5 (600-693)||(27760077-27760173)
chr5 (598-687)||(38376739-38376831)
chr5 (598-686)||(3762915-3763006)
chr5 (598-662)||(13413616-13413684)
chr5 (587-692)||(30330064-30330174)
chr5 (598-661)||(24918194-24918261)
chr5 (598-687)||(28358039-28358131)
chr5 (604-697)||(33040061-33040157)
chr5 (598-687)||(34457311-34457403)
chr5 (598-687)||(37656736-37656828)
chr5 (598-687)||(40169045-40169137)
chr5 (598-662)||(48315-48383)
chr5 (675-713)||(946725-946763)
chr5 (675-713)||(946872-946910)
chr5 (599-687)||(2908567-2908658)
chr5 (601-693)||(20811456-20811551)
chr5 (601-693)||(20837811-20837906)
chr5 (598-662)||(34457128-34457196)
chr5 (598-658)||(35527278-35527342)
chr5 (633-693)||(28009839-28009899)
chr5 (598-693)||(28010120-28010218)
chr5 (598-660)||(2908773-2908839)
chr5 (587-634)||(24792115-24792162)
chr5 (598-687)||(37781848-37781940)
chr5 (636-693)||(39668462-39668519)
chr5 (598-693)||(12965250-12965348)
chr5 (599-662)||(24125094-24125161)
chr5 (599-662)||(28156270-28156337)
[»] chr4 (52 HSPs)
chr4 (587-713)||(11290151-11290280)
chr4 (587-713)||(50868006-50868135)
chr4 (587-697)||(46528916-46529029)
chr4 (588-713)||(33912026-33912153)
chr4 (598-693)||(29669367-29669465)
chr4 (598-693)||(53740184-53740282)
chr4 (587-713)||(26941844-26941972)
chr4 (598-693)||(50858330-50858425)
chr4 (598-693)||(15665155-15665253)
chr4 (598-693)||(51469483-51469581)
chr4 (600-693)||(29669684-29669780)
chr4 (587-694)||(2016533-2016643)
chr4 (588-711)||(4026058-4026183)
chr4 (598-697)||(37097735-37097837)
chr4 (598-693)||(45426940-45427038)
chr4 (598-693)||(51470485-51470583)
chr4 (599-693)||(991206-991303)
chr4 (598-691)||(990551-990647)
chr4 (598-687)||(5488375-5488467)
chr4 (596-693)||(27048410-27048510)
chr4 (598-687)||(43943681-43943773)
chr4 (598-691)||(43972359-43972455)
chr4 (598-693)||(22867086-22867184)
chr4 (598-693)||(50858014-50858112)
chr4 (598-693)||(56509611-56509709)
chr4 (601-691)||(29734565-29734658)
chr4 (599-713)||(52810857-52810973)
chr4 (598-687)||(12016687-12016779)
chr4 (598-687)||(12016895-12016987)
chr4 (598-691)||(23018474-23018570)
chr4 (598-662)||(45427256-45427324)
chr4 (596-687)||(25753607-25753701)
chr4 (598-693)||(36558470-36558568)
chr4 (598-693)||(48843021-48843119)
chr4 (598-693)||(53739868-53739966)
chr4 (611-697)||(37288886-37288975)
chr4 (598-687)||(27634330-27634422)
chr4 (598-662)||(29113481-29113549)
chr4 (332-405)||(38146743-38146817)
chr4 (647-713)||(47845770-47845835)
chr4 (598-662)||(52214647-52214715)
chr4 (598-693)||(13254385-13254483)
chr4 (598-693)||(21497687-21497785)
chr4 (598-693)||(21498189-21498287)
chr4 (598-693)||(17222671-17222768)
chr4 (596-693)||(34205995-34206096)
chr4 (591-713)||(52810622-52810746)
chr4 (602-671)||(52827240-52827313)
chr4 (428-478)||(38146511-38146561)
chr4 (647-693)||(43798184-43798229)
chr4 (598-646)||(28395226-28395277)
chr4 (612-687)||(49380898-49380976)
[»] chr3 (66 HSPs)
chr3 (587-713)||(10450641-10450770)
chr3 (589-706)||(11244536-11244656)
chr3 (587-707)||(48511632-48511755)
chr3 (591-713)||(15820602-15820727)
chr3 (587-713)||(48511403-48511532)
chr3 (587-713)||(42190470-42190598)
chr3 (587-694)||(24453779-24453889)
chr3 (587-713)||(10450417-10450546)
chr3 (632-713)||(53966215-53966296)
chr3 (587-697)||(10856619-10856732)
chr3 (587-713)||(16060878-16061006)
chr3 (598-693)||(44573328-44573426)
chr3 (587-693)||(9180370-9180479)
chr3 (587-713)||(16051528-16051656)
chr3 (598-693)||(10453707-10453805)
chr3 (587-714)||(16045363-16045492)
chr3 (600-693)||(34715461-34715557)
chr3 (596-693)||(38300285-38300386)
chr3 (598-693)||(41380726-41380823)
chr3 (588-693)||(36020815-36020926)
chr3 (598-713)||(9179116-9179233)
chr3 (598-693)||(13769295-13769393)
chr3 (606-693)||(27219331-27219421)
chr3 (598-693)||(38300756-38300855)
chr3 (598-693)||(44573641-44573739)
chr3 (598-693)||(45443282-45443380)
chr3 (600-693)||(14170005-14170101)
chr3 (598-687)||(49477542-49477634)
chr3 (598-693)||(3985775-3985873)
chr3 (587-694)||(40769905-40770015)
chr3 (598-693)||(54369041-54369139)
chr3 (598-687)||(9264090-9264182)
chr3 (598-687)||(50692331-50692423)
chr3 (598-687)||(51642639-51642731)
chr3 (598-662)||(39078775-39078843)
chr3 (598-662)||(39956678-39956746)
chr3 (601-693)||(43101378-43101473)
chr3 (598-662)||(44573968-44574036)
chr3 (600-710)||(9178893-9179005)
chr3 (598-687)||(9264297-9264389)
chr3 (598-687)||(9264504-9264596)
chr3 (598-687)||(22339749-22339841)
chr3 (598-687)||(22407445-22407537)
chr3 (598-687)||(42258918-42259010)
chr3 (598-687)||(50692534-50692626)
chr3 (632-693)||(10453929-10453987)
chr3 (632-693)||(47833703-47833764)
chr3 (598-662)||(49477359-49477427)
chr3 (598-690)||(50203861-50203956)
chr3 (599-687)||(51338446-51338537)
chr3 (598-662)||(51642432-51642500)
chr3 (647-693)||(51734614-51734659)
chr3 (598-693)||(21750477-21750575)
chr3 (598-683)||(19820532-19820619)
chr3 (598-687)||(4191126-4191218)
chr3 (598-686)||(11414373-11414463)
chr3 (598-687)||(22407652-22407744)
chr3 (619-692)||(22666343-22666419)
chr3 (598-687)||(37223583-37223675)
chr3 (598-693)||(48685316-48685419)
chr3 (650-697)||(48837068-48837114)
chr3 (611-687)||(54495539-54495618)
chr3 (598-693)||(4255512-4255610)
chr3 (598-687)||(25627924-25628017)
chr3 (600-687)||(53640178-53640268)
chr3 (587-628)||(53966323-53966364)
[»] chr6 (31 HSPs)
chr6 (587-713)||(26842702-26842831)
chr6 (587-697)||(25184208-25184321)
chr6 (598-693)||(8144019-8144117)
chr6 (598-713)||(33396289-33396407)
chr6 (588-713)||(25183985-25184113)
chr6 (598-693)||(24055113-24055211)
chr6 (598-693)||(10418342-10418440)
chr6 (598-713)||(33396508-33396616)
chr6 (587-697)||(8427548-8427661)
chr6 (598-686)||(28149802-28149893)
chr6 (598-689)||(1744846-1744940)
chr6 (598-689)||(12134487-12134581)
chr6 (598-693)||(21067061-21067159)
chr6 (598-693)||(21088852-21088950)
chr6 (599-689)||(19054499-19054592)
chr6 (598-687)||(15101115-15101207)
chr6 (598-687)||(16877014-16877106)
chr6 (598-693)||(10733442-10733540)
chr6 (587-694)||(26339839-26339945)
chr6 (587-635)||(30718744-30718792)
chr6 (598-671)||(19712613-19712690)
chr6 (599-687)||(5269278-5269369)
chr6 (598-662)||(16876834-16876902)
chr6 (598-685)||(11313386-11313476)
chr6 (587-713)||(13673838-13673966)
chr6 (598-687)||(24558591-24558683)
chr6 (632-693)||(21043822-21043883)
chr6 (647-693)||(27582126-27582171)
chr6 (598-654)||(27914330-27914390)
chr6 (598-646)||(17147909-17147960)
chr6 (598-693)||(19753608-19753706)
[»] scaffold0166 (2 HSPs)
scaffold0166 (587-713)||(34643-34772)
scaffold0166 (587-634)||(34498-34545)
[»] scaffold0012 (1 HSPs)
scaffold0012 (608-694)||(165785-165874)
[»] scaffold0785 (1 HSPs)
scaffold0785 (589-695)||(3115-3224)
[»] scaffold0029 (1 HSPs)
scaffold0029 (598-687)||(76860-76952)
[»] scaffold0434 (2 HSPs)
scaffold0434 (598-662)||(13338-13406)
scaffold0434 (598-662)||(13545-13613)
[»] scaffold0989 (1 HSPs)
scaffold0989 (598-687)||(2951-3043)
[»] scaffold0054 (1 HSPs)
scaffold0054 (598-687)||(21267-21359)
[»] scaffold0419 (1 HSPs)
scaffold0419 (599-662)||(4244-4311)


Alignment Details
Target: chr2 (Bit Score: 250; Significance: 1e-138; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 477 - 788
Target Start/End: Original strand, 36161230 - 36161553
Alignment:
Q  477 ctgtaagggatcatatagtgataaatcttcctaattcaatctatatatataccttgcagcatgctcgtctccatcttgccatatagacaactacaagtac 576  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  36161230 ctgtaagggatcatatagtgataaatcttcctaattcaatctatatatataccttgcagcatgctcgtctccatcttgccatataaacaactacaagtat 36161329  T
Q  577 tgaattgtaagaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttttaaactcttctcaagaattctatctta 673  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||| ||||||||    
T  36161330 tgaattgtaagaatatcgagacctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctcttttaaactcttctcaagaatcctatctta 36161429  T
Q  674 tccgatgtgggactaaatcccacctgagagttggccgcta---------ggggtttagtcccacatccgatagagaacttccgtcgcaactatgagtctc 764  Q
    |||||||||||||||||||||| ||||||||||||||| |         ||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  36161430 tccgatgtgggactaaatcccagctgagagttggccgccaacaccaggtgggatttagtcccacatcggatagagaacttccgtcgcaactatgagtctc 36161529  T
Q  765 gtctctcccaggtatcttcatctc 788  Q
    ||||||||||||||||||||||||    
T  36161530 gtctctcccaggtatcttcatctc 36161553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 36160829 - 36161053
Alignment:
Q  1 atgatatatatgtgaatagaaattatccagtaactcaatcattaaccttaattctacttctttctaccannnnnnnnctccctatttgaatttgttgtaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        ||||||| |||||||||||||||    
T  36160829 atgatatatatgtgaatagaaattatctagtaactcaatcattaaccttaattctacttctttctaccattttttttctccctacttgaatttgttgtaa 36160928  T
Q  101 actaaaaatgtttcgaatatagaggcgggggctcaactaaaaccccgcacccgttccccatcagggttggagtttgcgtcccccgtcctcacctcagatg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36160929 actaaaaatgtttcgaatatagaggcgggggctcaactaaaaccccgcacccattccccatcagggttggagtttgcgtcccccgtcctcacctcagatg 36161028  T
Q  201 ggatcgtgtttctccactcccacca 225  Q
    |||| ||||||||||||||||||||    
T  36161029 ggattgtgtttctccactcccacca 36161053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 15962150 - 15962279
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||   ||||||||||||||| |||||| ||||||||| | ||||| |||||||||||    
T  15962150 gaatatagaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactattctcaagattcctatc-tatccgatgtg 15962248  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| |||||||||||||||    
T  15962249 ggactaaatcccacccgagagttggccgcta 15962279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 307 - 387
Target Start/End: Original strand, 36161150 - 36161230
Alignment:
Q  307 cctttttattaaccaattgtctcgtacaaatctaaatgtatctctatttttctaaactagacaatgacccctttcataaac 387  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36161150 cctttttattaaccaattgtctcgtacaaatctaaatatatctctatttttctaaactagacaatgacccctttcataaac 36161230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 39420808 - 39420679
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| |||||||||||| |||||||||||||||||| |||||   |||||||||||| |||||||||||||| | | |||||| ||||||||||    
T  39420808 gaatatcgaggcctaactcatccgtacaaaaccggcttgtactgtgaggagtgcctcctctttataaactcttctcaaaattcctatct-atccgatgtg 39420710  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| |||||||||||||||    
T  39420709 ggactaaatcccacccgagagttggccgcta 39420679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 587 - 694
Target Start/End: Original strand, 33532729 - 33532839
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||   ||||||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  33532729 gaatatcaagacctaactcaaccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatc-tatccgatgtg 33532827  T
Q  683 ggactaaatccc 694  Q
    ||||||||||||    
T  33532828 ggactaaatccc 33532839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 15961793 - 15961922
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||   ||||||||||||||| ||||   ||||||||| | ||||| |||||||||||    
T  15961793 gaatattgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaaagattctcaagattcctatc-tatccgatgtg 15961891  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| |||||||||||||||    
T  15961892 ggactaaatcccacccgagagttggccgcta 15961922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 36155106 - 36155219
Alignment:
Q  8 atatgtgaatagaaattatccagtaactcaatcattaaccttaattctacttctttctacca-nnnnnnnnctccc--tatttgaatttgttgtaaacta 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||  ||||||||||||||| ||||||    
T  36155106 atatgtgaatagaaattatccagtaactcaatcattaaccttaattctacttctttctaccatttttttttctcccgttatttgaatttgttgcaaacta 36155205  T
Q  105 aaaatgtttcgaat 118  Q
    ||||||||||||||    
T  36155206 aaaatgtttcgaat 36155219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 936923 - 936794
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| |||||||||||  |||||||| |||||||||||||||   || ||||||||| |||||||||||||||| | |||||| ||||||||||    
T  936923 gaatatcgaggcctaactcatctatacaaaactggcttgtacggtgaggagtgtctcctctttataaactcttctcaagattcctatct-atccgatgtg 936825  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
     |||||||||||||| |||||||||||||||    
T  936824 agactaaatcccacccgagagttggccgcta 936794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 11350180 - 11350309
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||| ||||||||||||||| |||||||||||||| ||||||   ||||||||||||||| |||||||||||||||||  ||||| |||||||| ||    
T  11350180 gaatatcaagacctaactcatccatacaaaaccggcttttacggtgaggagtgcctcctctttataaactcttctcaagaaacctatc-tatccgatatg 11350278  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| ||| |||||| ||||    
T  11350279 ggactaaatcccacccgagtgttggctgcta 11350309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 599 - 694
Target Start/End: Original strand, 10862063 - 10862161
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacgg---tgagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatccc 694  Q
    ||||||||||| ||||||||||||||||||||   |||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||    
T  10862063 ctaactcatccttacaaaaccggcttgtacggtgatgagtgcctcctctttataaactcttctcaagaatcctatc-tatccgatgtgggactaaatccc 10862161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 11349786 - 11349915
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||| ||||||||||||||| |||||||  ||||| |||||||||   |||||||||||| |||||||||||||||||  |||||| ||||||||||    
T  11349786 gaatatcaagacctaactcatccatacaaaattggcttttacggtgaggagtgcctcctctttataaactcttctcaagaaacctatct-atccgatgtg 11349884  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| ||| |||||| ||||    
T  11349885 ggactaaatcccacccgagtgttggctgcta 11349915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 32810869 - 32810998
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacgg---tgagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||   ||| || ||||||||| ||||||||| |||||||| ||||| ||||||||| |    
T  32810869 gaatatcgaggcctaactcatccccacaaaaccggcttgtaaggtgatgattgtctcctctttataaactcttatcaagaatcctatc-tatccgatgcg 32810967  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| ||| |||||| ||||    
T  32810968 ggactaaatcccacccgagtgttggctgcta 32810998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 3976475 - 3976573
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||    
T  3976475 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatattatc-tatccgatgtgggactaaatcc 3976573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 586 - 692
Target Start/End: Complemental strand, 17325282 - 17325173
Alignment:
Q  586 agaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgt 681  Q
    ||||||||||| |||||||||||| |||||||||||||||||| ||   ||||||||||||||| |||| |||||| |||||| ||||| |||| |||||    
T  17325282 agaatatcgaggcctaactcatccttacaaaaccggcttgtacagtgaagagtgcctcctctttataaattcttcttaagaatcctatc-tatcagatgt 17325184  T
Q  682 gggactaaatc 692  Q
    |||||||||||    
T  17325183 gggactaaatc 17325173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 589 - 713
Target Start/End: Complemental strand, 14280389 - 14280262
Alignment:
Q  589 atatcgagacctaactcatccctacaaaaccggcttgtacggtga---gtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtggg 684  Q
    |||| ||| |||||||||||  |||||||| |||||||| | |||   ||||||||||||| ||||||||||||| |||| |||||| |||| |||||||    
T  14280389 atattgaggcctaactcatcattacaaaacaggcttgtatgatgaagagtgcctcctctttataaactcttctcatgaatcctatct-atccaatgtggg 14280291  T
Q  685 actaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||||| |||||| ||||    
T  14280290 actaaatcccacctgagtgttggctgcta 14280262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 11969152 - 11969054
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| ||||||| ||||||||||||||    
T  11969152 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatc-tatccgacgtgggactaaatcc 11969054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 587 - 694
Target Start/End: Original strand, 28193568 - 28193678
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||||||  ||||||||||| |||||||| | ||||||||||   ||||||||||||||| |||| ||||||||||||| ||||| |||| ||||||    
T  28193568 gaatatcgaggtctaactcatccttacaaaactgacttgtacggtgaggagtgcctcctctttataaaatcttctcaagaatcctatc-tatctgatgtg 28193666  T
Q  683 ggactaaatccc 694  Q
    ||||||||||||    
T  28193667 ggactaaatccc 28193678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 4342251 - 4342379
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||| || |||||| ||||  || |||||||| ||||| ||||||   |||||||||||| | |||||| |||||||||||||||| ||||||||||    
T  4342251 gaatatcaaggcctaacccatcgttataaaaccggtttgtatggtgaggtctgcctcctctttattaactctcctcaagaattctatct-atccgatgtg 4342349  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||| ||||| |||||||||||    
T  4342350 ggactaaatccca-ctgagtgttggccgcta 4342379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 598 - 692
Target Start/End: Complemental strand, 43195884 - 43195787
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatc 692  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| |||| ||||||||||||||||    
T  43195884 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatc-tatctgatgtgggactaaatc 43195787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 601 - 693
Target Start/End: Original strand, 21213892 - 21213987
Alignment:
Q  601 aactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| ||||| ||||||||||||||||    
T  21213892 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatc-tatccaatgtgggactaaatcc 21213987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 3977007 - 3977105
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| |||||||||||||||||   ||||   |||||||||||| |||||||||||||||| | |||||| |||||||||||||||||||||    
T  3977007 cctaactcatccttacaaaaccggcttgtaatttgaggagtgcctcctctttataaactcttctcaagagtactatct-atccgatgtgggactaaatcc 3977105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 21214205 - 21214303
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| ||||  ||||||||||||||||    
T  21214205 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatc-tatctaatgtgggactaaatcc 21214303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 23054426 - 23054328
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| |||||||||| |||||| |||   ||||||||||||||| |||||||||||||||| || |||| |||| |||||||||||||||||    
T  23054426 cctaactcatccttacaaaaccgtcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagttatatc-tatctgatgtgggactaaatcc 23054328  T

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Target: chr2; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 25441796 - 25441698
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||| ||||||| |||||||||||||||| | ||||| |||| |||||||||||||||||    
T  25441796 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgccccctctttataaactcttctcaagagtactatc-tatctgatgtgggactaaatcc 25441698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 599 - 693
Target Start/End: Original strand, 6183371 - 6183468
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtg---agtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||||||| ||||||||||||||||| ||||   |||| ||||||||| |||||||||||||||| | ||||| |||||||||||||| |||||||    
T  6183371 ctaactcatccttacaaaaccggcttgtaaggtgagaagtgtctcctctttataaactcttctcaagagtactatc-tatccgatgtgggattaaatcc 6183468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 587 - 694
Target Start/End: Original strand, 17324015 - 17324124
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttttaaactcttctcaagaattctatcttatccgatgtgg 683  Q
    |||||||||||||||||||||||||||| |||||||||||| |||   ||||| || ||||||  || | ||||||||||| ||||| |||| |||||||    
T  17324015 gaatatcgagacctaactcatccctacacaaccggcttgtatggtgaggagtgtcttctctttataaatattctcaagaatcctatc-tatctgatgtgg 17324113  T
Q  684 gactaaatccc 694  Q
     ||||||||||    
T  17324114 aactaaatccc 17324124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 588 - 694
Target Start/End: Original strand, 28193329 - 28193438
Alignment:
Q  588 aatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgg 683  Q
    ||||| ||| |||||||||||  || |||| |||||||||||||   ||||||||||| ||| |||||||||||||||||| ||||| |||||||||||     
T  28193329 aatattgaggcctaactcatctttaaaaaatcggcttgtacggtgaggagtgcctcctatttataaactcttctcaagaatcctatc-tatccgatgtga 28193427  T
Q  684 gactaaatccc 694  Q
    |||||||||||    
T  28193428 gactaaatccc 28193438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 598 - 691
Target Start/End: Original strand, 42768338 - 42768432
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaat 691  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| |  |||| ||||||||||||||||||||    
T  42768338 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt--tatc-tatccgatgtgggactaaat 42768432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 600 - 687
Target Start/End: Original strand, 883607 - 883697
Alignment:
Q  600 taactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  |||| ||||||||||||||||    
T  883607 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatc-tatccgatgtgggact 883697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 587 - 694
Target Start/End: Complemental strand, 10862417 - 10862307
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacgg---tgagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| ||||||||| |  |||||||| |||||||||||   |||||| ||||||||| ||||||||||| || |||  |||| |||||||||||    
T  10862417 gaatatcgaggcctaactcacctttacaaaactggcttgtacggtgatgagtgtctcctctttataaactcttctaaaaaatcttatc-tatccgatgtg 10862319  T
Q  683 ggactaaatccc 694  Q
    ||||||||||||    
T  10862318 ggactaaatccc 10862307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 43169342 - 43169244
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||| ||| |||||||| |||||| | ||||||   |||||||||||| |||||||||||||||| | |||||| |||||||||||||||||||||    
T  43169342 cctaactcttccttacaaaactggcttgaaaggtgaggagtgcctcctctttataaactcttctcaagagtactatct-atccgatgtgggactaaatcc 43169244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 638 - 697
Target Start/End: Original strand, 4506087 - 4506146
Alignment:
Q  638 ctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcccacc 697  Q
    ||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  4506087 ctcctctttataaactcttctcaagaatcctatct-atccgatgtgggactaaatcccacc 4506146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 596 - 693
Target Start/End: Complemental strand, 7877946 - 7877846
Alignment:
Q  596 gacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaat 691  Q
    ||||||| |||||| ||||||||||||||||| |||   ||||| ||||||||| |||||||||||| ||| | ||||| |||||||||| |||||||||    
T  7877946 gacctaattcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactcttctcgagagtgctatc-tatccgatgtaggactaaat 7877848  T
Q  692 cc 693  Q
    ||    
T  7877847 cc 7877846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 17727504 - 17727412
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   ||||| |||||| |||||||||||||||| |  |||| ||||||||||||||||    
T  17727504 cctaactcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactcttctcaagagtcttatc-tatccgatgtgggact 17727412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 20998993 - 20999085
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  20998993 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 20999085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 33985775 - 33985865
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttttaaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   ||||||||| |||| ||||||||||||| |  |||| ||||||||||||||||    
T  33985775 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctc-tttatactcttctcaagagtcttatc-tatccgatgtgggact 33985865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 599 - 686
Target Start/End: Original strand, 27545121 - 27545211
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggac 686  Q
    ||||||||||| ||||||||||| ||||| ||||||   |||||||||||| |||||||||||||||| |  |||| |||||||||||||||    
T  27545121 ctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatc-tatccgatgtgggac 27545211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 3435490 - 3435582
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctct-tttaaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||| ||||| ||||||   |||||||||| | |||||||||||||||| |  |||| ||||||||||||||||    
T  3435490 cctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctgtataaactcttctcaagagtcttatc-tatccgatgtgggact 3435582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 604 - 693
Target Start/End: Original strand, 3976163 - 3976257
Alignment:
Q  604 tcatccctacaaaaccggcttgtacggtgag-----tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||| ||||||||||||||||| ||||||     || |||||| || |||||||||||||||| | |||||| |||||||||||||||||||||    
T  3976163 tcatccttacaaaaccggcttgtaaggtgagaggagtgtctcctccttataaactcttctcaagagtactatct-atccgatgtgggactaaatcc 3976257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 12431998 - 12431906
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||| ||||||| ||||||||||||||||| ||||||   || ||||||||| |||||||||||||||| |  |||| ||||||||||||||||    
T  12431998 cctagctcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatc-tatccgatgtgggact 12431906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 587 - 697
Target Start/End: Complemental strand, 32197019 - 32196908
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttttaaactcttctcaagaattctatcttatccgatgtgg 683  Q
    |||||||||| |||||| ||||| |||||||||| ||||||||||   ||||  |||||| |||| | | ||||||||||| ||||| |||||||||||     
T  32197019 gaatatcgagtcctaacacatccttacaaaaccgacttgtacggtgaggagtatctcctc-tttataattttctcaagaatactatc-tatccgatgtga 32196922  T
Q  684 gactaaatcccacc 697  Q
    |||||||| |||||    
T  32196921 gactaaattccacc 32196908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 34775457 - 34775365
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||| ||||||||||| |  | || ||||||||||||||||    
T  34775457 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaattcttctcaagagtcttgtc-tatccgatgtgggact 34775365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 40010074 - 40009982
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||| ||||| ||||||||||||||||| ||||||   |||||||||||| ||  |||||||||||| || |||| ||||||||||||||||    
T  40010074 cctaacacatccttacaaaaccggcttgtaaggtgaggattgcctcctctttctatgctcttctcaagagttttatc-tatccgatgtgggact 40009982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 587 - 695
Target Start/End: Complemental strand, 14289031 - 14288921
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||||| || |||| ||||| |||||| ||| ||||||||||   ||||| ||||||||| ||||||||||||||||||  ||| ||||||||  ||    
T  14289031 gaatatcga-acttaacgcatccttacaaatccgacttgtacggtgaggagtgtctcctctttataaactcttctcaagaatcatat-ttatccgacatg 14288934  T
Q  683 ggactaaatccca 695  Q
    |||||||||||||    
T  14288933 ggactaaatccca 14288921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 693
Target Start/End: Original strand, 30166120 - 30166181
Alignment:
Q  632 gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||||| ||||| |||||||||||||||| | |||||| |||||||||||||||||||||    
T  30166120 gagtgcctcttctttataaactcttctcaagagtgctatct-atccgatgtgggactaaatcc 30166181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 611 - 694
Target Start/End: Original strand, 10861851 - 10861937
Alignment:
Q  611 tacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatccc 694  Q
    ||||||||  ||||||||||||||   |||||||||||| |||||||||||||||||| ||||  ||||| || ||||||||||||||    
T  10861851 tacaaaacttgcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctat-atatccaatatgggactaaatccc 10861937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 672 - 713
Target Start/End: Original strand, 15962009 - 15962050
Alignment:
Q  672 tatccgatgtgggactaaatcccacctgagagttggccgcta 713  Q
    ||||| |||||||||||||||||||| |||||||||||||||    
T  15962009 tatccaatgtgggactaaatcccacccgagagttggccgcta 15962050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 18901868 - 18901966
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtga---gtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||| ||||| | |||||||| |||||||| |||||   ||||||||||||| ||||||||| |||||| |  ||||| |||||||||||||||||||||    
T  18901868 cctatctcattcttacaaaacaggcttgtaaggtgaagagtgcctcctctttataaactcttttcaagagtcttatct-atccgatgtgggactaaatcc 18901966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 587 - 694
Target Start/End: Original strand, 44266301 - 44266411
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgt---acggtgagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||||||  ||||||||||| ||||||| | ||||||   | | |||||| ||||||||| |||||||||||||| |||  |||| |||| ||||||    
T  44266301 gaatatcgaggtctaactcatccatacaaaatcagcttgtatgatgatgagtgtctcctctttataaactcttctcaaaaatcttatc-tatctgatgtg 44266399  T
Q  683 ggactaaatccc 694  Q
    ||||||||||||    
T  44266400 ggactaaatccc 44266411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 884157 - 884065
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    ||||||||| || ||||||||||||||||| ||||||   |||||||||||| || ||||||||||||| |   ||| ||||||||||||||||    
T  884157 cctaactcaaccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtctcatc-tatccgatgtgggact 884065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 19860137 - 19860045
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    ||||| |||||| ||||||||||||||||| |||   || |||||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  19860137 cctaaatcatccttacaaaaccggcttgtaaggtgtggattgcctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 19860045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 671
Target Start/End: Original strand, 38760321 - 38760398
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatct 671  Q
    |||||||||||  ||||||||||||||||| |||   ||||||||||||||| ||||||||| |||||| | ||||||    
T  38760321 cctaactcatcgttacaaaaccggcttgtaaggtgacgagtgcctcctctttataaactcttatcaagagtcctatct 38760398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 598 - 662
Target Start/End: Complemental strand, 883950 - 883882
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    |||||||||||| ||||||||||||||||| ||||||   ||||||  |||| ||||||||||||||||    
T  883950 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctctcctttataaactcttctcaaga 883882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 599 - 687
Target Start/End: Complemental strand, 16007076 - 16006985
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    ||||||||||| ||||||||||||||||| ||||||   | |||||||||| || ||||||||||||| |  | || ||||||||||||||||    
T  16007076 ctaactcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactcttctcaagagtcttgtc-tatccgatgtgggact 16006985  T

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Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 598 - 654
Target Start/End: Complemental strand, 30160427 - 30160367
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactct 654  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||    
T  30160427 cctaactcatccttacaaaaccggcttgtaaggtaaggagtgcctcctctttataaactct 30160367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 601 - 685
Target Start/End: Original strand, 33985982 - 33986069
Alignment:
Q  601 aactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtggga 685  Q
    ||||| ||| ||||||||||||||||| ||||||   |||||||||||| || ||||||||||||| |  |||| ||||||||||||||    
T  33985982 aactcttccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatc-tatccgatgtggga 33986069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 598 - 690
Target Start/End: Original strand, 39596710 - 39596805
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgta---cggtgagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaa 690  Q
    ||||||||||||  |||||||||| |||||   ||  ||||||||||||||| ||||||||| |||||| ||||||  || ||||||||||||||||    
T  39596710 cctaactcatcctcacaaaaccggattgtaaggcgaggagtgcctcctctttataaactcttatcaagagttctat-atagccgatgtgggactaaa 39596805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 599 - 662
Target Start/End: Complemental strand, 29684110 - 29684043
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    |||||| |||| ||||||||||||||||| ||||||   |||||||||||| || |||||||||||||    
T  29684110 ctaacttatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaaga 29684043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 4e-40; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 17295089 - 17294960
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| ||||||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  17295089 gaatatcgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatc-tatccgatgtg 17294991  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| ||| |||||||||||    
T  17294990 ggactaaatcccacccgagtgttggccgcta 17294960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 29228559 - 29228430
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| ||||||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||||||| | ||||| |||||||||||    
T  29228559 gaatatcgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatc-tatccgatgtg 29228461  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    || |||||||||||| |||||||||||||||    
T  29228460 ggtctaaatcccacccgagagttggccgcta 29228430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 4187507 - 4187635
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttttaaactcttctcaagaattctatcttatccgatgtgg 683  Q
    |||||||||| | |||||||||| ||||||||||||||||||||||||   ||||||||||| |||||||||||||||| | |||||| |||||||||||    
T  4187507 gaatatcgaggcgtaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctcttataaactcttctcaagattcctatct-atccgatgtgg 4187605  T
Q  684 gactaaatcccacctgagagttggccgcta 713  Q
    |||||||||||||| |||||||||||||||    
T  4187606 gactaaatcccacccgagagttggccgcta 4187635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 29228786 - 29228657
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| ||||||||||||||||||| ||||||||||| |||||   |||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  29228786 gaatatcgaggcctaactcatccctacaaatccggcttgtacagtgaggagtgcctcctctttataaactcttctcaagattcctatct-atccgatgtg 29228688  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| |||||||||||||||    
T  29228687 ggactaaatcccacccgagagttggccgcta 29228657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 585 - 713
Target Start/End: Complemental strand, 45443333 - 45443203
Alignment:
Q  585 aagaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatg 680  Q
    |||||||||||| ||||||| | || |||||||||||||||||||||   ||||||||| ||||| |||||||||||||||||| ||||| |||||||||    
T  45443333 aagaatatcgaggcctaactgaaccttacaaaaccggcttgtacggttaggagtgcctcatctttataaactcttctcaagaatcctatc-tatccgatg 45443235  T
Q  681 tgggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||||| ||| |||||||||||    
T  45443234 tgggactaaatcccacc-gagtgttggccgcta 45443203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 591 - 713
Target Start/End: Complemental strand, 51722361 - 51722235
Alignment:
Q  591 atcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctc--ctcttttaaactcttctcaagaattctatcttatccgatgtggga 685  Q
    |||||| |||||||||||| |||||||||||||||||||||   |||||||||  ||||| |||||||||||||||||| ||||| ||||||||||||||    
T  51722361 atcgaggcctaactcatccttacaaaaccggcttgtacggtgaggagtgcctcctctcttataaactcttctcaagaatcctatc-tatccgatgtggga 51722263  T
Q  686 ctaaatcccacctgagagttggccgcta 713  Q
    |||||||||||| ||| |||||| ||||    
T  51722262 ctaaatcccacccgagtgttggctgcta 51722235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 33562120 - 33562249
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||| || ||||||||||||| ||||||||||||||||||||   ||||||||||||||| ||| ||||| |||||||| ||||| |||||||||||    
T  33562120 gaatatcaaggcctaactcatccccacaaaaccggcttgtacggtgaggagtgcctcctctttataacctcttttcaagaatcctatc-tatccgatgtg 33562218  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    |||||||| |||||| ||| |||||||||||    
T  33562219 ggactaaaacccacccgagtgttggccgcta 33562249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 579 - 697
Target Start/End: Complemental strand, 12287968 - 12287846
Alignment:
Q  579 aattgtaa-gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatctta 673  Q
    |||||||| |||||||||| |||||||||||| ||||||||| |||||||||||   ||||||||||||||| ||| ||||| |||||||| ||||| ||    
T  12287968 aattgtaacgaatatcgaggcctaactcatccttacaaaaccagcttgtacggtgaggagtgcctcctctttataacctcttttcaagaatcctatc-ta 12287870  T
Q  674 tccgatgtgggactaaatcccacc 697  Q
    ||||||||||||||||||||||||    
T  12287869 tccgatgtgggactaaatcccacc 12287846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 19937047 - 19937145
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  19937047 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaattctatc-tatccgatgtgggactaaatcc 19937145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 28509391 - 28509489
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| |||||||||||||||||||||   ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  28509391 cctaactcatccttacaaaaccggcttgtacggtggagagtgcctcctctttataaactcttctcaagaatcctatc-tatccgatgtgggactaaatcc 28509489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 30604453 - 30604582
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||| ||||||||||||||| ||||||||||||||||| | |   ||||| ||||||||| |||||| ||||||||| | |||||| ||||||||||    
T  30604453 gaatatcaagacctaactcatccatacaaaaccggcttgtaagataaggagtgtctcctctttataaactattctcaagattcctatct-atccgatgtg 30604551  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| |||||||| ||||||    
T  30604552 ggactaaatcccacccgagagttgaccgcta 30604582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 45858766 - 45858638
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||| ||| |||||||||||| || ||||||| ||||||||||   ||||||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  45858766 gaatattgaggcctaactcatccttataaaaccgacttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatc-tatccgatgtg 45858668  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    |||||||||||| | |||| |||||||||||    
T  45858667 ggactaaatccc-catgagtgttggccgcta 45858638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 598 - 697
Target Start/End: Complemental strand, 18585138 - 18585036
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| |||||||| ||||||||||||   |||| |||||||||| |||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  18585138 cctaactcatccttacaaaactggcttgtacggtgaggagtccctcctctttataaaatcttctcaagaatcctatc-tatccgatgtgggactaaatcc 18585040  T
Q  694 cacc 697  Q
    ||||    
T  18585039 cacc 18585036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 599 - 693
Target Start/End: Complemental strand, 17419886 - 17419789
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  17419886 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatc-tatccgatgtgggactaaatcc 17419789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 587 - 709
Target Start/End: Original strand, 31411549 - 31411678
Alignment:
Q  587 gaatatcgagacctaact----catccctacaaaaccggcttgtacggtga---gtgcctcctcttt-taaactcttctcaagaattctatcttatccga 678  Q
    |||||||||| |||||||    ||||| |||||||||||||||||||||||   ||||||||| ||| ||||||||| |||||||| ||||| |||| ||    
T  31411549 gaatatcgaggcctaacttatccatccatacaaaaccggcttgtacggtgagatgtgcctcctttttataaactcttttcaagaatcctatc-tatctga 31411647  T
Q  679 tgtgggactaaatcccacctgagagttggcc 709  Q
    ||||||||||||||||||| ||| |||||||    
T  31411648 tgtgggactaaatcccacccgagtgttggcc 31411678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 598 - 694
Target Start/End: Complemental strand, 38474383 - 38474284
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||| |||||||| ||||| |||||||||| |||||||||||    
T  38474383 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttgtcaagaatcctatc-tatccgatgtaggactaaatcc 38474285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 4022129 - 4022227
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| |||||||| |||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  4022129 cctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatc-tatccgatgtgggactaaatcc 4022227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 598 - 713
Target Start/End: Original strand, 29383627 - 29383744
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| |||||||| ||||||||||||   |||||||||| |||| ||||||||||||||| ||  |||| |||||||||||||||||||| |    
T  29383627 cctaactcatccttacaaaactggcttgtacggtaaggagtgcctccgctttataaactcttctcaagtatcttatc-tatccgatgtgggactaaat-c 29383724  T
Q  694 cacctgagagttggccgcta 713  Q
    |||| ||| |||||||||||    
T  29383725 cacccgagtgttggccgcta 29383744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 31305811 - 31305713
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| |||| |||||||||||||||||    
T  31305811 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatc-tatcggatgtgggactaaatcc 31305713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 599 - 693
Target Start/End: Original strand, 2697336 - 2697433
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||| ||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  2697336 ctaactcgtccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatc-tatccgatgtgggactaaatcc 2697433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 638 - 713
Target Start/End: Original strand, 4187330 - 4187404
Alignment:
Q  638 ctcctcttttaaactcttctcaagaattctatcttatccgatgtgggactaaatcccacctgagagttggccgcta 713  Q
    |||||||| |||||||||||||||| | |||||| ||||||||||||||||||||||||  |||||||||||||||    
T  4187330 ctcctcttataaactcttctcaagattcctatct-atccgatgtgggactaaatcccactcgagagttggccgcta 4187404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 603 - 694
Target Start/End: Original strand, 27958056 - 27958150
Alignment:
Q  603 ctcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatccc 694  Q
    ||||||| |||||||||||||||||||||   ||||||||||||||| |||||||||||||||||| ||||| ||||  ||| |||||||||||||    
T  27958056 ctcatccttacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatc-tatctaatgcgggactaaatccc 27958150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 599 - 693
Target Start/End: Original strand, 8520098 - 8520195
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||||||  ||||||||||||||||| |||   ||||||||| ||||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  8520098 ctaactcatctttacaaaaccggcttgtaaggtgaggagtgcctcttctttataaactcttctcaagagtgctatc-tatccgatgtgggactaaatcc 8520195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 20735622 - 20735524
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||| ||||||||||| | ||||| |||| ||||||||| |||||||    
T  20735622 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaattcttctcaagagtactatc-tatctgatgtgggattaaatcc 20735524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 600 - 687
Target Start/End: Original strand, 39649090 - 39649180
Alignment:
Q  600 taactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  |||| ||||||||||||||||    
T  39649090 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatc-tatccgatgtgggact 39649180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 43423379 - 43423281
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| |||||||| |||||||| |||   ||||||||||||||| |||||||||||||||| |  |||| |||||||||||||| |||||||    
T  43423379 cctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgttatc-tatccgatgtgggaataaatcc 43423281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 587 - 693
Target Start/End: Original strand, 40642769 - 40642878
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||| | |||| ||||||| |||| ||||||||| | | |||||   || ||||||||| |||||||||||||||||| |||||| ||||||||||    
T  40642769 gaatatcggggcctagctcatccttacagaaccggcttttgctgtgaggagtgtctcctctttataaactcttctcaagaatcctatct-atccgatgtg 40642867  T
Q  683 ggactaaatcc 693  Q
    |||||||||||    
T  40642868 ggactaaatcc 40642878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 599 - 687
Target Start/End: Original strand, 43361557 - 43361648
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    ||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  43361557 ctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 43361648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 599 - 694
Target Start/End: Original strand, 27957814 - 27957912
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatccc 694  Q
    ||||||||||| |||||||||||||||||||||   ||| | ||||||||| |||||| ||||||||||| | ||| |||| |||| |||||||||||||    
T  27957814 ctaactcatccttacaaaaccggcttgtacggtgaggagcgtctcctctttataaacttttctcaagaatcccatc-tatcagatgcgggactaaatccc 27957912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 33879782 - 33879880
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||| ||||||| |||   ||||| ||||||||| |||||||||||||||| | ||||  |||| |||||||||||||||||    
T  33879782 cctaactcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaactcttctcaagagtgctat-atatctgatgtgggactaaatcc 33879880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 33964473 - 33964375
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||| ||||||| |||   ||||| ||||||||| |||||||||||||||| | ||||  |||| |||||||||||||||||    
T  33964473 cctaactcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaactcttctcaagagtgctat-atatctgatgtgggactaaatcc 33964375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 600 - 687
Target Start/End: Original strand, 52846855 - 52846945
Alignment:
Q  600 taactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||| ||||||||||||||||| ||||||   |||||||||||| || ||||||||||||| |  |||| ||||||||||||||||    
T  52846855 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatc-tatccgatgtgggact 52846945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 2997060 - 2997152
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||  ||||||   | |||||||||| || ||||||||||||| || |||| ||||||||||||||||    
T  2997060 cctaactcatccttacaaaaccggcttgtgaggtgagtattacctcctctttatatactcttctcaagagttttatc-tatccgatgtgggact 2997152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 15392125 - 15392033
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| |||||||||||||||||  |||||   |||||||||||| || ||||||||||||| |  |||| ||||||||||||||||    
T  15392125 cctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttatatactcttctcaagagtcttatc-tatccgatgtgggact 15392033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 658 - 713
Target Start/End: Complemental strand, 17294903 - 17294849
Alignment:
Q  658 caagaattctatcttatccgatgtgggactaaatcccacctgagagttggccgcta 713  Q
    ||||||| |||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  17294903 caagaatcctatct-atccgatgtgggactaaatcccacccgagtgttggccgcta 17294849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 29273229 - 29273321
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   ||||||| |||| |||||||||||||||| |  | || ||||||||||||||||    
T  29273229 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcccctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 29273321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 599 - 687
Target Start/End: Original strand, 43361762 - 43361853
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    ||||||||||| ||||||||||||||||| ||||||   ||| |||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  43361762 ctaactcatccttacaaaaccggcttgtaaggtgaggattgcttcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 43361853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 600 - 693
Target Start/End: Complemental strand, 45264760 - 45264665
Alignment:
Q  600 taactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttttaaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||| ||||||||||||||||| |||   ||||||| ||| || ||||||||| |||||| | ||||| ||| ||| ||||||||||||||    
T  45264760 taactcatccttacaaaaccggcttgtaaggtgaggagtgccgccttttataaactcttatcaagagtcctatc-tattcgacgtgggactaaatcc 45264665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 2104264 - 2104362
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   |||||||||||||||  |||||||  |||||  | ||||| || |||||||||||||||||||    
T  2104264 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttacaaactctgatcaagcttcctatc-taaccgatgtgggactaaatcc 2104362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 587 - 692
Target Start/End: Original strand, 40521486 - 40521594
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtga---gtgcctcc-tcttt-taaactcttctcaagaattctatcttatccgatgt 681  Q
    |||||||||| | |||||||| | |||||| |||| |||||||||||   ||| |||| ||||| ||||||||||||||||||  ||||| |||||||||    
T  40521486 gaatatcgaggcttaactcattcttacaaa-ccggtttgtacggtgaagagtgtctccctctttataaactcttctcaagaatcttatct-atccgatgt 40521583  T
Q  682 gggactaaatc 692  Q
    |||||||||||    
T  40521584 gggactaaatc 40521594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 599 - 693
Target Start/End: Complemental strand, 40664309 - 40664212
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgta---cggtgagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||| ||||| |||||||||||||||||   ||  ||||||||||||||| ||||||||| |||||| | ||||| || |||||||| ||||||||||    
T  40664309 ctaacacatccttacaaaaccggcttgtaaggcgaggagtgcctcctctttataaactcttatcaagagtcctatc-taaccgatgtgagactaaatcc 40664212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 598 - 660
Target Start/End: Complemental strand, 45403540 - 45403474
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaa 660  Q
    |||||||||||| ||||||||| ||||||| |||   ||||||||||||||| ||||||||||||||    
T  45403540 cctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaa 45403474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 671
Target Start/End: Complemental strand, 36326998 - 36326929
Alignment:
Q  606 atccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatct 671  Q
    |||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||||    
T  36326998 atccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatct 36326929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 600 - 693
Target Start/End: Complemental strand, 37600970 - 37600874
Alignment:
Q  600 taactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||| |||||||||||||| || |||   ||||||| ||||||| |||||||||||||||| |  |||| ||||| ||| ||||||||||||    
T  37600970 taactcatccttacaaaaccggcttataaggtgaggagtgccgcctctttataaactcttctcaagagtgttatc-tatccaatgagggactaaatcc 37600874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 600 - 688
Target Start/End: Complemental strand, 20735853 - 20735762
Alignment:
Q  600 taactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggacta 688  Q
    |||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||| ||| ||| |  |||| |||| ||||||||||||    
T  20735853 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctactcgagagtcttatc-tatctgatgtgggacta 20735762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 598 - 670
Target Start/End: Complemental strand, 36332212 - 36332136
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatc 670  Q
    |||||||||||| ||||||||||||||||| |||   |||||| |||||||| |||||||||  ||||||| |||||    
T  36332212 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcatcctctttataaactcttaacaagaatcctatc 36332136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 19481396 - 19481494
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   |||||||| |||||| ||||||||  |||||  | ||||| || ||| |||||||||||||||    
T  19481396 cctaactcatccttacaaaaccggcttgtaaggtttggagtgcctactctttataaactctgatcaagcttcctatc-taaccgttgtgggactaaatcc 19481494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 599 - 662
Target Start/End: Original strand, 33342283 - 33342350
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    ||||||||||| ||||||||||||||||| ||||||   | |||||||||| || |||||||||||||    
T  33342283 ctaactcatccttacaaaaccggcttgtaaggtgaggtttacctcctctttatatactcttctcaaga 33342350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 600 - 687
Target Start/End: Original strand, 48558327 - 48558417
Alignment:
Q  600 taactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||| ||||||||||||||||| ||||||   ||| |||||||| || ||||||||||||| |  |||| |||||||| |||||||    
T  48558327 taactcatccttacaaaaccggcttgtaaggtgaggattgcttcctctttatatactcttctcaagagtcttatc-tatccgatatgggact 48558417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 1e-37; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 331 - 419
Target Start/End: Original strand, 26039248 - 26039336
Alignment:
Q  331 tacaaatctaaatgtatctctatttttctaaactagacaatgacccctttcataaacattaatagataccattctacagatatcctagc 419  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  26039248 tacaaatctaaatgtatctctatttttctaaactagacaatgacccatttcgtaaacattaatagataccattctacagatatcctagc 26039336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 587 - 697
Target Start/End: Complemental strand, 15711607 - 15711494
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||||   ||||||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  15711607 gaatatcgaggcctaactcatccctataaaacaggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatc-tatccgatgtg 15711509  T
Q  683 ggactaaatcccacc 697  Q
    |||||||||||||||    
T  15711508 ggactaaatcccacc 15711494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 593 - 713
Target Start/End: Complemental strand, 14019913 - 14019790
Alignment:
Q  593 cgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggacta 688  Q
    ||||||||||||||||| |||||||||||||||| ||||   ||||||||||||||| |||||||||||||||||  ||||| |||||||||||||||||    
T  14019913 cgagacctaactcatccttacaaaaccggcttgttcggtgaggagtgcctcctctttataaactcttctcaagaaacctatc-tatccgatgtgggacta 14019815  T
Q  689 aatcccacctgagagttggccgcta 713  Q
    ||||||||| ||| |||||| ||||    
T  14019814 aatcccacccgagtgttggctgcta 14019790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 18464180 - 18464052
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| |||||||| |||||||||| |||||||||||||||||   ||||| |||||| |||||||||||||||||| |||||| ||| ||||||    
T  18464180 gaatatcgaggcctaactcgtccctacaaa-ccggcttgtacggtgaggagtgccttctctttataaactcttctcaagaatcctatct-atctgatgtg 18464083  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| ||| |||||||||||    
T  18464082 ggactaaatcccacccgagtgttggccgcta 18464052  T

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Target: chr8; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 35908789 - 35908661
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| |||||||||||| |||||||||||||||||||||   |||||||| |||||| ||||||||||||||| || ||||| || ||||||||    
T  35908789 gaatatcgaggcctaactcatccttacaaaaccggcttgtacggtgaggagtgccttctctttataaactcttctcaagtatcctatc-tacccgatgtg 35908691  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| ||| |||||||||||    
T  35908690 ggactaaatcccacc-gagtgttggccgcta 35908661  T

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Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 587 - 693
Target Start/End: Original strand, 17607207 - 17607316
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtg---agtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||   |||||||||||||| |||||||||| ||||||| ||||| |||||||||||    
T  17607207 gaatatcgaggcctaactcatccttacaaaactggcttgtacggtgagtagtgcctcctctttataaactcttcacaagaatcctatc-tatccgatgtg 17607305  T
Q  683 ggactaaatcc 693  Q
     ||||||||||    
T  17607306 agactaaatcc 17607316  T

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Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 18905956 - 18905858
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  18905956 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatc-tatccgatgtgggactaaatcc 18905858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 20232400 - 20232519
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtggga 685  Q
    |||||||||| |||||||||||  |||||||||||||||||||||||       |||||| ||||||||||||||||||   |||| |||||||||||||    
T  20232400 gaatatcgaggcctaactcatctatacaaaaccggcttgtacggtga-------ctctttataaactcttctcaagaatctcatct-atccgatgtggga 20232491  T
Q  686 ctaaatcccacctgagagttggccgcta 713  Q
    |||||||||||| ||| |||||||||||    
T  20232492 ctaaatcccacccgagtgttggccgcta 20232519  T

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Target: chr8; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 32931501 - 32931403
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||    
T  32931501 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatgatatc-tatccgatgtgggactaaatcc 32931403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 587 - 671
Target Start/End: Original strand, 38287957 - 38288045
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtg---agtgcctcctcttt-taaactcttctcaagaattctatct 671  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||   |||| ||||||||| |||||||||||||| ||| ||||||    
T  38287957 gaatatcgagacctaactcatccttacaaaaccagcttgtacggtgagtagtgtctcctctttataaactcttctcaaaaatcctatct 38288045  T

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Target: chr8; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 21085152 - 21085250
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||  ||||||||| ||||||| ||||||   |||||||||||| |||||||||||||||| | |||||| |||||||||||||||||||||    
T  21085152 cctaactcatcattacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatct-atccgatgtgggactaaatcc 21085250  T

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Target: chr8; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 21653427 - 21653329
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtg---agtgcctcctct-tttaaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| ||||   |||||||||||| | ||||||||||||||||   ||||| ||||||||||||||||||||||    
T  21653427 cctaactcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctatataaactcttctcaagagcactatc-tatccgatgtgggactaaatcc 21653329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 34248177 - 34248079
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||| |||||| | ||||| || |||||||||||||||||||    
T  34248177 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatc-taaccgatgtgggactaaatcc 34248079  T

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Target: chr8; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 599 - 713
Target Start/End: Original strand, 9595998 - 9596114
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatccc 694  Q
    ||||||||||| |||||| ||| ||||||| |||||   |||||||||||| |||| | ||||||||||| |||||| ||||||||||| ||||||||||    
T  9595998 ctaactcatccttacaaagccgacttgtactgtgaggagtgcctcctctttataaaatattctcaagaatcctatct-atccgatgtggaactaaatccc 9596096  T
Q  695 acctgagagttggccgcta 713  Q
    ||| ||| |||||||||||    
T  9596097 acc-gagtgttggccgcta 9596114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 43599411 - 43599319
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  |||| ||||||||||||||||    
T  43599411 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatc-tatccgatgtgggact 43599319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 8276649 - 8276551
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||||| |  |||||||||||||||||| |||||   || ||||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  8276649 cctaactcaacattacaaaaccggcttgtacagtgagaagtgtctcctctttataaactcttctcaagaatcctatc-tatccaatgtgggactaaatcc 8276551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 21653904 - 21653806
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctct-tttaaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||| | |||||| |||||||||   ||||| ||||||||||||||||||||||    
T  21653904 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctgtataaacttttctcaagagcactatc-tatccgatgtgggactaaatcc 21653806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 23027832 - 23027930
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||| | || |||||||||||||| |||   ||||||||||||||| ||| |||||||||||| ||||||| ||||| ||||||||||||||||    
T  23027832 cctaactcattcttaaaaaaccggcttgtaaggtgaggagtgcctcctctttataagctcttctcaagagttctatc-tatcctatgtgggactaaatcc 23027930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 475 - 566
Target Start/End: Original strand, 26039539 - 26039626
Alignment:
Q  475 ccctgtaagggatcatatagtgataaatcttcctaattcaatctatatatataccttgcagcatgctcgtctccatcttgccatatagacaa 566  Q
    |||| |||||||||||||||| ||||| ||||||||| ||||||||||  ||   ||||||||| || ||||||||||||||||||||||||    
T  26039539 ccctataagggatcatatagttataaagcttcctaatccaatctatat-gat---ttgcagcattcttgtctccatcttgccatatagacaa 26039626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 34248459 - 34248361
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||| |||||| | ||||| || || ||||||||||||||||    
T  34248459 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatc-taaccaatgtgggactaaatcc 34248361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 8559681 - 8559589
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| || ||||||||||||| |  |||| ||||||||||||||||    
T  8559681 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatc-tatccgatgtgggact 8559589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 10989245 - 10989337
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  10989245 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 10989337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 662
Target Start/End: Original strand, 10989038 - 10989106
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| ||||||||||||||||    
T  10989038 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 10989106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 599 - 687
Target Start/End: Complemental strand, 35561765 - 35561674
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    ||||||||||| |||||||||||| || | ||||||   |||||||||||| ||||||||||||||||||  |||| ||||||||||||||||    
T  35561765 ctaactcatccttacaaaaccggcatgcaaggtgaggattgcctcctctttataaactcttctcaagaatcttatc-tatccgatgtgggact 35561674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 598 - 681
Target Start/End: Original strand, 3183915 - 3184001
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgt 681  Q
    |||||||||||  ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| | ||||| ||||||||||    
T  3183915 cctaactcatcgttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcctatc-tatccgatgt 3184001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 600 - 687
Target Start/End: Original strand, 15011035 - 15011125
Alignment:
Q  600 taactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  15011035 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 15011125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 20298520 - 20298618
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||  ||||||||| ||||||| |||   ||||||||||||||| ||||||||||||||||||  |||| ||||  ||||||||||||||||    
T  20298520 cctaactcatcattacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaataatatc-tatcaaatgtgggactaaatcc 20298618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 633 - 693
Target Start/End: Original strand, 23027547 - 23027607
Alignment:
Q  633 agtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||||| |||||||||||||||| ||||||| |||| |||||||||||||||||    
T  23027547 agtgcctcctctttataaactcttctcaagagttctatc-tatctgatgtgggactaaatcc 23027607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 599 - 713
Target Start/End: Complemental strand, 8605588 - 8605473
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatccc 694  Q
    ||||||||||| || ||||||||||||||| |||||   |||||||||| | |||||||||||||||||| |||| |||||||| ||| ||||||||  |    
T  8605588 ctaactcatcctta-aaaaccggcttgtacagtgaggagtgcctcctctatataaactcttctcaagaatcctat-ttatccgacgtgagactaaatgtc 8605491  T
Q  695 acctgagagttggccgcta 713  Q
    ||| ||| |||||||||||    
T  8605490 acc-gagtgttggccgcta 8605473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 638 - 697
Target Start/End: Original strand, 38287784 - 38287843
Alignment:
Q  638 ctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcccacc 697  Q
    ||||||||| ||||||||| |||||||| |||||| |||||||||||||||||||||||||    
T  38287784 ctcctctttataaactcttatcaagaatcctatct-atccgatgtgggactaaatcccacc 38287843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 662
Target Start/End: Complemental strand, 36997266 - 36997198
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaaga 662  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||| ||||||    
T  36997266 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaaga 36997198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 662
Target Start/End: Original strand, 40902397 - 40902465
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    ||||||| |||| ||||||||||||||||| ||||||   |||||||||||| ||||||||||||||||    
T  40902397 cctaacttatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 40902465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 599 - 687
Target Start/End: Complemental strand, 42228870 - 42228779
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    ||||||||||| ||||||| ||||||||| ||||||   |||||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  42228870 ctaactcatccttacaaaatcggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 42228779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 600 - 691
Target Start/End: Complemental strand, 22277622 - 22277528
Alignment:
Q  600 taactcatccctacaaaaccggcttgtacggtg---agtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaat 691  Q
    |||||||||| ||||||||||||||||| ||||   |||| ||||||||| |||||||||||| | |||  |||  ||||||||||||||||||||    
T  22277622 taactcatccttacaaaaccggcttgtaaggtgagtagtgtctcctctttataaactcttctcgataatgttat-atatccgatgtgggactaaat 22277528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 43984320 - 43984418
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||  |||||  | | ||| || |||||||||||||||||||    
T  43984320 cctaactcatccttacaaaaccggcttgtatggtgaggagtgcctcctctttataaactctgatcaagcttccaatc-taaccgatgtgggactaaatcc 43984418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 591 - 697
Target Start/End: Original strand, 9596216 - 9596325
Alignment:
Q  591 atcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggac 686  Q
    |||||| |||||||||||  || ||||| ||||||||| ||   |||||| | |||||| ||||||||||||||||||  |||| |||||||| || |||    
T  9596216 atcgaggcctaactcatctttaaaaaactggcttgtacagtgaggagtgcattctctttataaactcttctcaagaatcttatc-tatccgatatgagac 9596314  T
Q  687 taaatcccacc 697  Q
    |||||||||||    
T  9596315 taaatcccacc 9596325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 596 - 693
Target Start/End: Original strand, 39588086 - 39588189
Alignment:
Q  596 gacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taa---actcttctcaagaattctatcttatccgatgtgggacta 688  Q
    |||||||||||||| |||||||||||||| || |||   ||||||||||||||| |||   ||||||||||| ||| ||||| |||| | ||||||||||    
T  39588086 gacctaactcatccttacaaaaccggcttataaggtgaggagtgcctcctctttataaactactcttctcaaaaatcctatc-tatctgttgtgggacta 39588184  T
Q  689 aatcc 693  Q
    |||||    
T  39588185 aatcc 39588189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 15010825 - 15010917
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| || |||||||||||||| ||||||   |||||||||||| |||| ||||||||||| |  | || ||||||||||||||||    
T  15010825 cctaactcatccttataaaaccggcttgtaaggtgaggattgcctcctctttataaattcttctcaagagtcttgtc-tatccgatgtgggact 15010917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 16454639 - 16454731
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| || |||||||| |||| |  |||| ||||||||||| ||||    
T  16454639 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttcttaagagtcttatc-tatccgatgtgagact 16454731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 20760664 - 20760756
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||| ||||| ||||||   |||||| ||||| |||||||||||||||| |  | || ||||||||||||||||    
T  20760664 cctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcatctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 20760756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 646
Target Start/End: Original strand, 36993951 - 36994002
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt 646  Q
    |||||||||||| ||||||||||||||||| |||   |||||||||||||||    
T  36993951 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcttt 36994002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 1e-37; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 27585367 - 27585238
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||||||||||||||||||| |||||||||||||||||||||   ||||||||||| ||| |||||||||||||||||| ||||| |||||||||||    
T  27585367 gaatatcgagacctaactcatccttacaaaaccggcttgtacggtgaggagtgcctcctttttataaactcttctcaagaatcctatc-tatccgatgtg 27585269  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||||||| |||||| ||||    
T  27585268 ggactaaatcccacctgagtgttggctgcta 27585238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 36496000 - 36495871
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||   ||||||||||||||| |||||| ||||||||||| ||||| |||||||||||    
T  36496000 gaatatagaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactattctcaagaatcctatc-tatccgatgtg 36495902  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| |||||||||||||||    
T  36495901 ggactaaatcccacccgagagttggccgcta 36495871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 47346316 - 47346445
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| |||||||||||| |||||||||||||||||||||   ||||||||||||||| |||||||||||||||| | ||||||| |||||||||    
T  47346316 gaatatcgaggcctaactcatccgtacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctt-tccgatgtg 47346414  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| |||||||||||||||    
T  47346415 ggactaaatcccacccgagagttggccgcta 47346445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 34748889 - 34748760
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||||||   |||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  34748889 gaatatcgaggtctaactcatccttacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagaatcctatc-tatccgatgtg 34748791  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| ||| |||||||||||    
T  34748790 ggactaaatcccacccgagtgttggccgcta 34748760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 36495777 - 36495648
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||   ||||||||||||||| |||||| ||||||||||| ||||| |||||||||||    
T  36495777 gaatatcgaggcctaactcatccctacaaaaccggcttctacggtgaggagtgcctcctctttataaactattctcaagaatcctatc-tatccgatgtg 36495679  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||| ||||| |||||||||||||||    
T  36495678 ggactaaatgccacccgagagttggccgcta 36495648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 47346087 - 47346216
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| |||||||||||| |||||||||||||||||||||   ||||||||||||||| |||||||||||||||| | ||||| |||| ||||||    
T  47346087 gaatatcgaggcctaactcatccgtacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatc-tatctgatgtg 47346185  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| |||||||||||||||    
T  47346186 ggactaaatcccacccgagagttggccgcta 47346216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 37756158 - 37756286
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtga---gtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| |||||||||||| || ||||||||||||||||||||   ||||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  37756158 gaatatcgaggcctaactcatccata-aaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagattcctatct-atccgatgtg 37756255  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| |||||||||||||||    
T  37756256 ggactaaatcccacccgagagttggccgcta 37756286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 585 - 710
Target Start/End: Complemental strand, 33909250 - 33909122
Alignment:
Q  585 aagaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatg 680  Q
    |||||||||||| |||||||||||| |||||||||||||||||| ||   |||||  |||||||| |||||||||||||||||| ||||| |||||||||    
T  33909250 aagaatatcgaggcctaactcatccatacaaaaccggcttgtacagtgaggagtgtatcctctttataaactcttctcaagaatcctatc-tatccgatg 33909152  T
Q  681 tgggactaaatcccacctgagagttggccg 710  Q
    ||||||||||||||||| ||||||||||||    
T  33909151 tgggactaaatcccacccgagagttggccg 33909122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 587 - 697
Target Start/End: Original strand, 34914913 - 34915026
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| ||||||||||||||||||||||||||||||||||   ||||||||| ||||| |||||||||||||||||| || || |||||||||||    
T  34914913 gaatatcgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcatctttgtaaactcttctcaagaatcctgtc-tatccgatgtg 34915011  T
Q  683 ggactaaatcccacc 697  Q
    |||||||||||||||    
T  34915012 ggactaaatcccacc 34915026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 37755932 - 37756060
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtga---gtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||| ||| |||||||||||| || ||||||||||||||||||||   ||||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  37755932 gaatattgaggcctaactcatccata-aaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagattcctatct-atccgatgtg 37756029  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| |||||||||||||||    
T  37756030 ggactaaatcccacccgagagttggccgcta 37756060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 37761906 - 37762034
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtga---gtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||| ||| |||||||||||| || ||||||||||||||||||||   ||||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  37761906 gaatattgaggcctaactcatccata-aaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagattcctatct-atccgatgtg 37762003  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| |||||||||||||||    
T  37762004 ggactaaatcccacccgagagttggccgcta 37762034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 587 - 697
Target Start/End: Original strand, 36270463 - 36270576
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| |||||||||||| |||||| ||||||||||||||   ||||| ||||||||| ||||||| |||||||||| ||||| |||||||||||    
T  36270463 gaatatcgaggcctaactcatccttacaaagccggcttgtacggtgaggagtgtctcctctttataaactcgtctcaagaatcctatc-tatccgatgtg 36270561  T
Q  683 ggactaaatcccacc 697  Q
    |||||||||||||||    
T  36270562 ggactaaatcccacc 36270576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 599 - 713
Target Start/End: Original strand, 39549983 - 39550099
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtga---gtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatccc 694  Q
    ||||||||||| |||||||| ||||||||| ||||   ||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||    
T  39549983 ctaactcatccttacaaaactggcttgtacagtgatgagtgcctcctctttataaactcttctcaagaatcctatct-atccgatgtgggactaaatccc 39550081  T
Q  695 acctgagagttggccgcta 713  Q
    ||| ||| |||||||||||    
T  39550082 acc-gagtgttggccgcta 39550099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 588 - 713
Target Start/End: Original strand, 36270691 - 36270819
Alignment:
Q  588 aatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgg 683  Q
    ||||||||| |||||||||||| |||||||||||||||||| ||   ||||||||||||||| ||||||| | |||||||| ||||| ||||| ||||||    
T  36270691 aatatcgaggcctaactcatccttacaaaaccggcttgtacagtgaggagtgcctcctctttataaactcctgtcaagaatcctatc-tatccaatgtgg 36270789  T
Q  684 gactaaatcccacctgagagttggccgcta 713  Q
    ||| |||||||||| ||| |||||||||||    
T  36270790 gacaaaatcccacccgagtgttggccgcta 36270819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 43384284 - 43384382
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  43384284 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatcctatc-tatccgatgtgggactaaatcc 43384382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 587 - 712
Target Start/End: Original strand, 27729467 - 27729598
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatct---tatccgat 679  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||   ||| || ||||| |||||||||| ||| ||| ||||||   ||||||||    
T  27729467 gaatatcgagacctaactcatccttacaaaatcggcttgtacggtgaggattgcatcatctttataaactcttcccaataatcctatctatctatccgat 27729566  T
Q  680 gtgggactaaatcccacctgagagttggccgct 712  Q
    |||||||||||||||||| ||| ||||||||||    
T  27729567 gtgggactaaatcccacc-gagtgttggccgct 27729598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 44314307 - 44314426
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtggga 685  Q
    |||||||||| |||||||||||  |||||||||||||||||||||||       |||||| ||||||||||||||||||   |||| |||||||||||||    
T  44314307 gaatatcgaggcctaactcatctatacaaaaccggcttgtacggtga-------ctctttataaactcttctcaagaatctcatct-atccgatgtggga 44314398  T
Q  686 ctaaatcccacctgagagttggccgcta 713  Q
    |||||||||||| ||| |||||||||||    
T  44314399 ctaaatcccacccgagtgttggccgcta 44314426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 1663608 - 1663707
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt--taaactcttctcaagaattctatcttatccgatgtgggactaaatc 692  Q
    |||||||||||| ||||||||||||||||| |||   |||||||||||||||  |||||||||||||||| | ||||| |||||||||||||||||||||    
T  1663608 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcttttataaactcttctcaagagtgctatc-tatccgatgtgggactaaatc 1663706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 587 - 671
Target Start/End: Original strand, 14991502 - 14991590
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatct 671  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||   ||||||||||||||| |||||||||||||||||| ||||||    
T  14991502 gaatatcgagacctaactcatccttacaaaatcgacttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatct 14991590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 587 - 671
Target Start/End: Original strand, 15421113 - 15421201
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatct 671  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||   ||||||||||||||| |||||||||||||||||| ||||||    
T  15421113 gaatatcgagacctaactcatccttacaaaatcgacttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatct 15421201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 257271 - 257369
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||| ||| |||   ||||||||||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||    
T  257271 cctaactcatccttacaaaaccggctagtaaggtgaggagtgcctcctctttataaactcttctcaagaataatatc-tatccgatgtgggactaaatcc 257369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 1661195 - 1661293
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||| | ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| || |||| ||||||||||||||||||||||    
T  1661195 cctaactcattcttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagttttatc-tatccgatgtgggactaaatcc 1661293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 598 - 694
Target Start/End: Complemental strand, 19843583 - 19843485
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttttaaactcttctcaagaattctatcttatccgatgtgggactaaatccc 694  Q
    |||||||||||| ||||||| |||||||||||||   ||||||||||||||| ||||||||||||| ||| ||||| |||||||| ||||||| ||||||    
T  19843583 cctaactcatccttacaaaatcggcttgtacggtgaggagtgcctcctctttaaaactcttctcaataatcctatc-tatccgatttgggacttaatccc 19843485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 599 - 691
Target Start/End: Original strand, 36092604 - 36092699
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctct-tttaaactcttctcaagaattctatcttatccgatgtgggactaaat 691  Q
    ||||||||||| ||||||||| ||||||| |||   ||||||||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||    
T  36092604 ctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctctataaactcttctcaagaatcctatc-tatccgatgtgggactaaat 36092699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 7135247 - 7135345
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||  ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| ||||||||||| ||||||||||    
T  7135247 cctaactcatctttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatc-tatccgatgtgtgactaaatcc 7135345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 648 - 713
Target Start/End: Original strand, 24240236 - 24240300
Alignment:
Q  648 aaactcttctcaagaattctatcttatccgatgtgggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  24240236 aaactcttctcaagattcctatct-atccgatgtgggactaaatcccacctgagagttggctgcta 24240300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 37530927 - 37531025
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| | ||||||||||||||| | |   ||||||||||||||| |||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  37530927 cctaactcatccttgcaaaaccggcttgtaagttgaggagtgcctcctctttataaactcttctcaagaatcctatc-tatccgacgtgggactaaatcc 37531025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 591 - 697
Target Start/End: Original strand, 22206275 - 22206384
Alignment:
Q  591 atcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggac 686  Q
    |||||| |||||||  ||||||||||| ||| ||||| ||||||   |||||||||||| |||||| ||||||||||| |||||| || |||||||||||    
T  22206275 atcgaggcctaactggtccctacaaaatcggtttgtatggtgaggagtgcctcctctttataaacttttctcaagaatcctatct-attcgatgtgggac 22206373  T
Q  687 taaatcccacc 697  Q
    |||||||||||    
T  22206374 taaatcccacc 22206384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 591 - 697
Target Start/End: Complemental strand, 22228464 - 22228355
Alignment:
Q  591 atcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggac 686  Q
    |||||| |||||||  ||||||||||| ||| ||||| ||||||   |||||||||||| |||||| ||||||||||| |||||| || |||||||||||    
T  22228464 atcgaggcctaactggtccctacaaaatcggtttgtatggtgaggagtgcctcctctttataaacttttctcaagaatcctatct-attcgatgtgggac 22228366  T
Q  687 taaatcccacc 697  Q
    |||||||||||    
T  22228365 taaatcccacc 22228355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 599 - 693
Target Start/End: Original strand, 37272050 - 37272147
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||| |||||| | ||||| || |||||||||||||||||||    
T  37272050 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatc-taaccgatgtgggactaaatcc 37272147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 600 - 693
Target Start/End: Original strand, 40121624 - 40121720
Alignment:
Q  600 taactcatccctacaaaaccggcttgtacggt---gagtgcctcctct-tttaaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||| ||||||||||||||||| |||   ||||||||||||| | |||||||||||||||| | ||||| |||||||||||| |||||||||    
T  40121624 taactcatccttacaaaaccggcttgtagggtgaggagtgcctcctctctataaactcttctcaagagtactatc-tatccgatgtggaactaaatcc 40121720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 598 - 713
Target Start/End: Original strand, 24240410 - 24240512
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgagtgcctcctcttttaaactcttctcaagaattctatcttatccgatgtgggactaaatcccacc 697  Q
    |||||||||||| ||||||||||||||||||||||||             |||||||||| |||| | |||||| |||||||||||||||||||||||||    
T  24240410 cctaactcatccgtacaaaaccggcttgtacggtgagg------------aaactcttcttaagattcctatct-atccgatgtgggactaaatcccacc 24240496  T
Q  698 tgagagttggccgcta 713  Q
     |||||||||||||||    
T  24240497 cgagagttggccgcta 24240512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 36092396 - 36092494
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctct-tttaaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   |||| |||||||| | ||||||||||||||||||  |||| ||||| ||||||||||||||||    
T  36092396 cctaactcatccttacaaaaccggcttgtaaggtgaggagtacctcctctctataaactcttctcaagaatcatatc-tatccaatgtgggactaaatcc 36092494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 588 - 694
Target Start/End: Original strand, 22686725 - 22686836
Alignment:
Q  588 aatatcgagacctaactcatccctacaaaaccggcttgtacggtga-----gtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgt 681  Q
    ||||||| | ||||| |||||||||||||||| |||||||||||||     ||  ||||||||| ||||||||| |||||||| |||| |||||||||||    
T  22686725 aatatcggggcctaattcatccctacaaaaccagcttgtacggtgaggagtgtctctcctctttataaactcttttcaagaatcctat-ttatccgatgt 22686823  T
Q  682 gggactaaatccc 694  Q
    |||| ||||||||    
T  22686824 gggattaaatccc 22686836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 599 - 693
Target Start/End: Complemental strand, 28910131 - 28910034
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||| ||||| | ||||| ||||  ||||||||||||||||    
T  28910131 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttcccaagagtcctatc-tatcttatgtgggactaaatcc 28910034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 6783138 - 6783046
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  |||| ||||||||||| ||||    
T  6783138 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatc-tatccgatgtgagact 6783046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 585 - 662
Target Start/End: Complemental strand, 33909419 - 33909338
Alignment:
Q  585 aagaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaaga 662  Q
    |||||||| ||| |||||||||||| |||||||||||||||||| ||   ||||| ||||||||| ||||||||||||||||    
T  33909419 aagaatattgaggcctaactcatccatacaaaaccggcttgtacagtgaggagtgtctcctctttataaactcttctcaaga 33909338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 600 - 693
Target Start/End: Original strand, 43167899 - 43167995
Alignment:
Q  600 taactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||| |||||||||||||  || ||||||   |||||||||||| |||||||||||||||| | ||||| |||||||| |||||||||||||    
T  43167899 taactcatccttacaaaaccggctcataaggtgaggattgcctcctctttataaactcttctcaagagtgctatc-tatccgatttgggactaaatcc 43167995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 690
Target Start/End: Original strand, 40121943 - 40122038
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaa 690  Q
    |||||| || ||| |||||||||||||||| |||   ||||| ||||||||| |||||||||||||||| | ||||| |||||||||||||||||||    
T  40121943 cctaacacaaccccacaaaaccggcttgtagggtgaggagtgtctcctctttataaactcttctcaagagtactatc-tatccgatgtgggactaaa 40122038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 599 - 694
Target Start/End: Complemental strand, 19843806 - 19843708
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatccc 694  Q
    ||||||||||| ||||||| || ||||||||||   |||||| | |||||| |||||||||||||||||| ||||| |||| ||| ||||||||||||||    
T  19843806 ctaactcatccttacaaaatcgtcttgtacggtgaggagtgctttctctttataaactcttctcaagaatcctatc-tatctgatttgggactaaatccc 19843708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 603 - 693
Target Start/End: Complemental strand, 41670678 - 41670585
Alignment:
Q  603 ctcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||| ||||||||| | ||||| ||||||   |||||||||||| |||||||||||||||| | |||||| || ||||||||||||||||||    
T  41670678 ctcatccttacaaaaccagtttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatct-attcgatgtgggactaaatcc 41670585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 593 - 694
Target Start/End: Complemental strand, 20296368 - 20296264
Alignment:
Q  593 cgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggacta 688  Q
    |||| ||||||| |||| || |||||||||||||| || |||   || ||||||||| |||||||||||||||||| || ||| |||| |||||||||||    
T  20296368 cgaggcctaacttatccatataaaaccggcttgtatggcgaggagtgtctcctctttataaactcttctcaagaatcctctct-atccaatgtgggacta 20296270  T
Q  689 aatccc 694  Q
    ||||||    
T  20296269 aatccc 20296264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 599 - 660
Target Start/End: Complemental strand, 31374864 - 31374799
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaa 660  Q
    ||||||||||| ||||||||||||||||| ||||||   |||||||||||| ||||||||||||||    
T  31374864 ctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaa 31374799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 6782926 - 6782834
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||| || ||| |||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  |||| ||||||||||| ||||    
T  6782926 cctaacacaaccccacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatc-tatccgatgtgagact 6782834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 23396709 - 23396617
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||| ||||| || ||||||||||||| |  |||| |||||| |||||||||    
T  23396709 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcatctttatatactcttctcaagagtcttatc-tatccgttgtgggact 23396617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 587 - 634
Target Start/End: Original strand, 24240187 - 24240234
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 634  Q
    |||||||||| |||||||||||  ||||||||||||||||| ||||||    
T  24240187 gaatatcgaggcctaactcatcagtacaaaaccggcttgtatggtgag 24240234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 29252676 - 29252584
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||   |||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  |||| ||||||| ||||||||    
T  29252676 cctaactcatcatcacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatc-tatccgacgtgggact 29252584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 39808601 - 39808693
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    ||||||||||||  ||||||| |||||||| ||||||   |||||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  39808601 cctaactcatcctcacaaaactggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 39808693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 599 - 637
Target Start/End: Complemental strand, 28910264 - 28910226
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgagtgc 637  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  28910264 ctaactcatccttacaaaaccggcttgtaaggtgagtgc 28910226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 598 - 662
Target Start/End: Original strand, 39808468 - 39808536
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    ||||||||||||  ||||||||||||| || ||||||   |||||||||||| ||||||||||||||||    
T  39808468 cctaactcatcctcacaaaaccggcttttaaggtgaggattgcctcctctttataaactcttctcaaga 39808536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 598 - 662
Target Start/End: Complemental strand, 43288632 - 43288564
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaaga 662  Q
    ||||||| |||| ||||||||||||||||| |||   ||||||||||||||| ||||||||| ||||||    
T  43288632 cctaactaatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttgtcaaga 43288564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 602 - 690
Target Start/End: Original strand, 43383954 - 43384045
Alignment:
Q  602 actcatccctacaaaaccggcttgtacggtgagt---gcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaa 690  Q
    |||||||| ||||||||||| ||||| || ||||   ||||||||||| |||||||||  ||||| | |||||| ||||||||||||||||||    
T  43383954 actcatccttacaaaaccggtttgtaaggggagtagtgcctcctctttataaactctttgcaagactcctatct-atccgatgtgggactaaa 43384045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 43288364 - 43288266
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||||| || ||||||||||| ||||| | |   ||||||||||||||| ||||||||| |||||| | ||||| || ||||||||||| |||||||    
T  43288364 cctaactcacccttacaaaaccggattgtaagatgaggagtgcctcctctttataaactcttatcaagagtcctatc-taaccgatgtgggagtaaatcc 43288266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 2e-36; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 83804 - 83932
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt--gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgg 683  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||| ||||||||||| ||||  ||||||||||||    
T  83804 gaatatcgagacctaactcatccatacaaaaccggcttgtacggtgagagtgcctcctctttataaacttttctcaagaatcctat-atatccgatgtgg 83902  T
Q  684 gactaaatcccacctgagagttggccgcta 713  Q
    |||||||||||||| ||| |||||||||||    
T  83903 gactaaatcccacccgagtgttggccgcta 83932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 587 - 709
Target Start/End: Original strand, 84027 - 84152
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||||||||||||||||||| |||||||||||||||||||||   ||||||||||||||| |||||||||||||||||| ||||  |||||||||||    
T  84027 gaatatcgagacctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctat-atatccgatgtg 84125  T
Q  683 ggactaaatcccacctgagagttggcc 709  Q
    ||||||||||||||| ||| |||||||    
T  84126 ggactaaatcccacccgagtgttggcc 84152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 29396336 - 29396465
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| |||||||||||| |||||||||||||||||||||   ||||||||||||||| |||||| ||||||||| | ||||| |||| ||||||    
T  29396336 gaatatcgaggcctaactcatccgtacaaaaccggcttgtacggtgaggagtgcctcctctttataaacttttctcaagattcctatc-tatctgatgtg 29396434  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| |||||||||||||||    
T  29396435 ggactaaatcccacccgagagttggccgcta 29396465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 32395307 - 32395436
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| | |||||||||| |||||||||||||||||| |||||   |||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  32395307 gaatatcgaggcgtaactcatccatacaaaaccggcttgtacagtgaggagtgcctcctctttataaactcttctcaagattcctatct-atccgatgtg 32395405  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| |||||||||||||||    
T  32395406 ggactaaatcccacccgagagttggccgcta 32395436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 22196319 - 22196447
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||   ||||||||||||||| |||||||||||||||| | ||||| |||||||||||    
T  22196319 gaatatcgaggcctaactcatccttacaaaaccggcttttacggtgaggagtgcctcctctttataaactcttctcaagagtactatc-tatccgatgtg 22196417  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| ||| |||||||||||    
T  22196418 ggactaaatcccacc-gagtgttggccgcta 22196447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 30329947 - 30329818
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| ||||||| |||| |||||||||| |||||||||||||   | |||||||||| |||||||||||||||||| |||||| ||||||||||    
T  30329947 gaatatcgaggcctaactgatccatacaaaaccgacttgtacggtgaggagttcctcctctttataaactcttctcaagaatcctatct-atccgatgtg 30329849  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    |||||||||||| || |||||||||||||||    
T  30329848 ggactaaatccctcccgagagttggccgcta 30329818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 579 - 694
Target Start/End: Original strand, 2471677 - 2471796
Alignment:
Q  579 aattgtaag-aatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatctta 673  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||   ||||||||||||||| |||||||||||||| ||  ||||| ||    
T  2471677 aattgtaaggaatatcgagacctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaaaaaccctatc-ta 2471775  T
Q  674 tccgatgtgggactaaatccc 694  Q
    |||||||||||||||||||||    
T  2471776 tccgatgtgggactaaatccc 2471796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 587 - 694
Target Start/End: Complemental strand, 19439971 - 19439861
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||   ||||| ||||||||| |||| ||||||||||||| ||||| |||| ||||||    
T  19439971 gaatatcaagacctaactcaaccctacaaaaccggcttgtacggtgaggagtgtctcctctttataaattcttctcaagaatcctatc-tatctgatgtg 19439873  T
Q  683 ggactaaatccc 694  Q
    ||||||||||||    
T  19439872 ggactaaatccc 19439861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 598 - 713
Target Start/End: Original strand, 22196557 - 22196674
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacgg---tgagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||||||   |||||| ||||||||| |||||||||||||||| |  |||| ||||||||||||||||||||||    
T  22196557 cctaactcatccttacaaaaccggcttgtacggtgatgagtgtctcctctttataaactcttctcaagagtcatatc-tatccgatgtgggactaaatcc 22196655  T
Q  694 cacctgagagttggccgcta 713  Q
    |||| ||| |||||||||||    
T  22196656 cacc-gagtgttggccgcta 22196674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 5095894 - 5096018
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtggga 685  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||  |  |||||||| ||||||||||| || ||| ||||| ||||||||||||||    
T  5095894 gaatatcgaggcctaactcatccctacaaaaccggcttgtagggtga--ggatcctctttataaactcttctaaaaaatcctatc-tatccgatgtggga 5095990  T
Q  686 ctaaatcccacctgagagttggccgcta 713  Q
     ||||||||||| ||| |||| ||||||    
T  5095991 gtaaatcccacccgagtgttgaccgcta 5096018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 24792260 - 24792389
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttttaaactcttctcaagaattctatcttatccgatgtgg 683  Q
    |||||||||| ||||| ||||||| |||||||||| ||||| ||||||   ||||||||||| |||||||||||||||| | ||||| |||||||| |||    
T  24792260 gaatatcgaggcctaaatcatccccacaaaaccggtttgtaaggtgaggagtgcctcctcttataaactcttctcaagattcctatc-tatccgatatgg 24792358  T
Q  684 gactaaatccca-cctgagagttggccgcta 713  Q
    ||||||||| || || |||||||||||||||    
T  24792359 gactaaatctcaccccgagagttggccgcta 24792389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 37995638 - 37995736
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  37995638 cctaactcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaactcttctcaagagtgctatc-tatccgatgtgggactaaatcc 37995736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 586 - 693
Target Start/End: Original strand, 14769824 - 14769934
Alignment:
Q  586 agaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgt 681  Q
    ||||||| ||| |||||||||||| | |||||||||||||||||||   ||||| ||| ||||| |||||||||||||||||| ||||| ||||||||||    
T  14769824 agaatattgaggcctaactcatcctttcaaaaccggcttgtacggtgaggagtgtctcgtctttataaactcttctcaagaatcctatc-tatccgatgt 14769922  T
Q  682 gggactaaatcc 693  Q
    | ||||||||||    
T  14769923 gagactaaatcc 14769934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 38131864 - 38131766
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| ||||||   || ||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  38131864 cctaactcatccttacaaaaccggcttgtaaggtgaggaatgtctcctctttataaactcttctcaagagtcctatc-tatccgatgtgggactaaatcc 38131766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 30588153 - 30588059
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| |||||||| |||||||| || ||||||||||||||| ||||||||| |||||| ||||||| || |||||||||||||||||||    
T  30588153 cctaactcatccttacaaaacaggcttgtaagg-gagtgcctcctctttataaactcttatcaagagttctatc-taaccgatgtgggactaaatcc 30588059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 873700 - 873798
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctct-tttaaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||| ||||||| ||||||   |||||||||| | |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  873700 cctaactcatccttacaaaacctgcttgtaaggtgaggaatgcctcctctctataaactcttctcaagagtcctatc-tatccgatgtgggactaaatcc 873798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 13843797 - 13843699
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||| ||||||||||| |||||||||||||||| | ||||| |||| |||||||||||||||||    
T  13843797 cctaactcatccttacaaaaccggcttgtaaggtgaggagcgcctcctctttataaactcttctcaagagtactatc-tatctgatgtgggactaaatcc 13843699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 38663347 - 38663249
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||| |||||| | |||||||| | |||||||||||||||||    
T  38663347 cctaactcatccttacaaaaccggcttgtaaggtgacgagtgcctcctctttataaactcttatcaagagtcctatctta-ctgatgtgggactaaatcc 38663249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 33040581 - 33040452
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| |||| || |||| ||||||||||||||||| ||||||   |||||||  |   |||||||||||||||||| |||||| ||| ||||||    
T  33040581 gaatatcgaggcctaccttatccttacaaaaccggcttgtaaggtgaggagtgcctcccatacataaactcttctcaagaatcctatct-atctgatgtg 33040483  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||  ||| |||||||||||    
T  33040482 ggactaaatcccacgcgagtgttggccgcta 33040452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 35526992 - 35527084
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  |||| ||||||||||||||||    
T  35526992 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatc-tatccgatgtgggact 35527084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 1028097 - 1028195
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||   |||||||||| ||||| ||||||   |||||||||||| |||||||||||||||| | |||||| |||||||||||||||||||||    
T  1028097 cctaactcatcgtcacaaaaccggtttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatct-atccgatgtgggactaaatcc 1028195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 13844113 - 13844015
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtg---agtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||  ||||| ||||   |||||||||||||| |||||||||||||||| | ||||| |||| |||||||||||||||||    
T  13844113 cctaactcatccttacaaaaccgttttgtaaggtgagaagtgcctcctctttataaactcttctcaagagtactatc-tatcagatgtgggactaaatcc 13844015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 29432512 - 29432414
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtg---agtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| ||||   |||||||||||||| ||||||||| |||||| | ||||| || || ||||||||||||||||    
T  29432512 cctaactcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctttataaactcttatcaagagtcctatc-taaccaatgtgggactaaatcc 29432414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 648 - 713
Target Start/End: Complemental strand, 33040331 - 33040267
Alignment:
Q  648 aaactcttctcaagaattctatcttatccgatgtgggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||  ||| |||||||||||    
T  33040331 aaactcttctcaagaatcctatct-atccgatgtgggactaaatcccacgcgagtgttggccgcta 33040267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 48108 - 48200
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  48108 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 48200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 24994169 - 24994074
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtg---agtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| ||||   |||||||||||||| ||||||||||||||| || |||| |||||   |||||||||||||||    
T  24994169 cctaactcatccttacaaaaccggcttgtaaggtgagtagtgcctcctctttataaactcttctcaagcatcctat-ttatc---tgtgggactaaatcc 24994074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 600 - 693
Target Start/End: Complemental strand, 27760173 - 27760077
Alignment:
Q  600 taactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||| || ||||||||||||||||| |||   ||||||||| |||||  ||||||||||||||| | ||||| ||||||||||||||||||||||    
T  27760173 taactcaaccttacaaaaccggcttgtaaggtgaggagtgcctcttctttagaaactcttctcaagagtcctatc-tatccgatgtgggactaaatcc 27760077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 38376831 - 38376739
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   || ||||||||| |||||||||||||||| |  |||| ||||||||||||||||    
T  38376831 cctaactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatc-tatccgatgtgggact 38376739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 686
Target Start/End: Complemental strand, 3763006 - 3762915
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggac 686  Q
    |||||||||||| ||||||||||||||||| |||   || |||||||||||| |||||||||||||||| |  |||| |||||||||||||||    
T  3763006 cctaactcatccttacaaaaccggcttgtaaggtgaagattgcctcctctttataaactcttctcaagagtcttatc-tatccgatgtgggac 3762915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 662
Target Start/End: Complemental strand, 13413684 - 13413616
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| ||||||||||||||||    
T  13413684 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 13413616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 587 - 692
Target Start/End: Complemental strand, 30330174 - 30330064
Alignment:
Q  587 gaatatcgagacctaactcat--ccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatg 680  Q
    |||||||||| ||||||||||  || | |||||||||||||||||||   ||||||||||||||| || |||||||||||||||  |||| ||| | |||    
T  30330174 gaatatcgaggcctaactcatatccttgcaaaaccggcttgtacggtgaggagtgcctcctctttatatactcttctcaagaatcatatc-tattcaatg 30330076  T
Q  681 tgggactaaatc 692  Q
    ||||||||||||    
T  30330075 tgggactaaatc 30330064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 598 - 661
Target Start/End: Complemental strand, 24918261 - 24918194
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtg---agtgcctcctcttt-taaactcttctcaag 661  Q
    |||||||||||| ||||||||||||||||| ||||   |||||||||||||| |||||||||||||||    
T  24918261 cctaactcatccttacaaaaccggcttgtaaggtgagtagtgcctcctctttataaactcttctcaag 24918194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 28358039 - 28358131
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   || ||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  28358039 cctaactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 28358131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 604 - 697
Target Start/End: Complemental strand, 33040157 - 33040061
Alignment:
Q  604 tcatccctacaaaaccggcttgtacggt---gagtgcctcctct-tttaaactcttctcaagaattctatcttatccgatgtgggactaaatcccacc 697  Q
    |||||| ||||||||||||||||| |||   ||||||||||||| | ||||||||| |||||||| ||||  ||| ||||||| ||||||||||||||    
T  33040157 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctatataaactcttttcaagaatcctat-atattcgatgtgagactaaatcccacc 33040061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 34457403 - 34457311
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   ||| |||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  34457403 cctaactcatccttacaaaaccggcttgtaaggtgagaattgcatcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 34457311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 37656736 - 37656828
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| || ||||||||||||| |  |||| ||||||||||| ||||    
T  37656736 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatc-tatccgatgtgagact 37656828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 40169045 - 40169137
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| || ||||||||||||| |  |||| |||| |||||||||||    
T  40169045 cctaactcatccttacaaaaccggcttgtaaggtgagaattgcctcctctttatatactcttctcaagagtcttatc-tatctgatgtgggact 40169137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 662
Target Start/End: Original strand, 48315 - 48383
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||| |||||||||    
T  48315 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaacttttctcaaga 48383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 675 - 713
Target Start/End: Complemental strand, 946763 - 946725
Alignment:
Q  675 ccgatgtgggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  946763 ccgatgtgggactaaatcccacccgagagttggccgcta 946725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 675 - 713
Target Start/End: Complemental strand, 946910 - 946872
Alignment:
Q  675 ccgatgtgggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  946910 ccgatgtgggactaaatcccacccgagagttggccgcta 946872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 599 - 687
Target Start/End: Original strand, 2908567 - 2908658
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    ||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||| ||||||||| |  | || ||||||||||||||||    
T  2908567 ctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactattctcaagagtcttgtc-tatccgatgtgggact 2908658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 601 - 693
Target Start/End: Complemental strand, 20811551 - 20811456
Alignment:
Q  601 aactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||||  ||||||||||||||||| |||   ||||||||||||||| |||| ||||||||||| |  |||| ||||||| ||||||||||||||    
T  20811551 aactcatcattacaaaaccggcttgtaaggtgtggagtgcctcctctttataaaatcttctcaagagtgttatc-tatccgaagtgggactaaatcc 20811456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 601 - 693
Target Start/End: Complemental strand, 20837906 - 20837811
Alignment:
Q  601 aactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||||  ||||||||||||||||| |||   ||||||||||||||| |||| ||||||||||| |  |||| ||||||| ||||||||||||||    
T  20837906 aactcatcattacaaaaccggcttgtaaggtgtggagtgcctcctctttataaaatcttctcaagagtgttatc-tatccgaagtgggactaaatcc 20837811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 662
Target Start/End: Complemental strand, 34457196 - 34457128
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    |||||||||||| ||||||||||||||||| ||||||   ||| |||||||| ||||||||||||||||    
T  34457196 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcatcctctttataaactcttctcaaga 34457128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 658
Target Start/End: Original strand, 35527278 - 35527342
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctc 658  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| ||||||||||||    
T  35527278 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttgtaaactcttctc 35527342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 633 - 693
Target Start/End: Original strand, 28009839 - 28009899
Alignment:
Q  633 agtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||| ||||| |||||||||||||||| ||||||| |||| |||||||||||||||||    
T  28009839 agtgcctcttctttataaactcttctcaagagttctatc-tatctgatgtgggactaaatcc 28009899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 28010120 - 28010218
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||| | || | |||||||||||| ||||||   |||||||||||| | | |||||||||||| |||||||| |||| ||||||||||||||||    
T  28010120 cctaactcattcttaaataaccggcttgtaaggtgaggagtgcctcctctttattagctcttctcaagagttctatct-atcctatgtgggactaaatcc 28010218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 598 - 660
Target Start/End: Original strand, 2908773 - 2908839
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaa 660  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||| |||||||    
T  2908773 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactattctcaa 2908839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 587 - 634
Target Start/End: Original strand, 24792115 - 24792162
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 634  Q
    ||||||||||  ||||||||| | ||||||||||||||||||||||||    
T  24792115 gaatatcgaggtctaactcattcttacaaaaccggcttgtacggtgag 24792162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 37781848 - 37781940
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||| ||||||| ||||||   |||||||||||| || ||||||||||||| |  |||| ||||||||||| ||||    
T  37781848 cctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatc-tatccgatgtgagact 37781940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 636 - 693
Target Start/End: Original strand, 39668462 - 39668519
Alignment:
Q  636 gcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||||||| |||| |||||||||||||  ||||| |||||||||||||||||||||    
T  39668462 gcctcctctttataaattcttctcaagaatcatatct-atccgatgtgggactaaatcc 39668519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 12965250 - 12965348
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   |||||| |||||||| ||||||||  |||||  | ||||| || ||||||||| |||||||||    
T  12965250 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactctgatcaagcttcctatc-taaccgatgtggcactaaatcc 12965348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 599 - 662
Target Start/End: Complemental strand, 24125161 - 24125094
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    ||||||||||| ||||||||||||||||| ||||||   | |||||||||| || |||||||||||||    
T  24125161 ctaactcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactcttctcaaga 24125094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 599 - 662
Target Start/End: Complemental strand, 28156337 - 28156270
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    ||||||||||| |||| |||| ||||||| ||||||   |||||||||||| ||||||||||||||||    
T  28156337 ctaactcatccttacataaccagcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 28156270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 3e-35; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 11290280 - 11290151
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||| ||| |||||||||||| ||||||||||||||||||||||||   |||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  11290280 gaatattgaggcctaactcatccatacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagattcctatct-atccgatgtg 11290182  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| |||||||||||||||    
T  11290181 ggactaaatcccacccgagagttggccgcta 11290151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 50868006 - 50868135
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||| ||| ||| |||||||| ||||||||||||||||||||||||   |||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  50868006 gaatattgaggcctgactcatccatacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagattcctatct-atccgatgtg 50868104  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| ||||||||| |||||    
T  50868105 ggactaaatcccacccgagagttggtcgcta 50868135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 587 - 697
Target Start/End: Original strand, 46528916 - 46529029
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| |||||||||||| |||||||||||||||||||||   ||||||||||||||| |||||||||||||||||| | ||| |||||||||||    
T  46528916 gaatatcgaggcctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatccaatc-tatccgatgtg 46529014  T
Q  683 ggactaaatcccacc 697  Q
     ||||||||||||||    
T  46529015 agactaaatcccacc 46529029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 588 - 713
Target Start/End: Complemental strand, 33912153 - 33912026
Alignment:
Q  588 aatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgg 683  Q
    ||||||||| |||||||||||| |||||||||||||| ||| ||   ||||||||||||||| ||||||||||||||| || ||||| || |||||||||    
T  33912153 aatatcgaggcctaactcatccttacaaaaccggcttatacagtgaggagtgcctcctctttataaactcttctcaagtatcctatc-tacccgatgtgg 33912055  T
Q  684 gactaaatcccacctgagagttggccgcta 713  Q
    |||||||||||||| ||| |||||||||||    
T  33912054 gactaaatcccacc-gagtgttggccgcta 33912026  T

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Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 29669367 - 29669465
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  29669367 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatc-tatccgatgtgggactaaatcc 29669465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 53740282 - 53740184
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  53740282 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatc-tatccgatgtgggactaaatcc 53740184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 26941972 - 26941844
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctct-tttaaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||| || |||||| ||||| ||||||||||||||||||| |   ||||||||||||| | ||||||||||||||| || ||||| ||| |||||||    
T  26941972 gaatatctaggcctaacccatccttacaaaaccggcttgtacgatgaggagtgcctcctctatataaactcttctcaaggatactatc-tattcgatgtg 26941874  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| ||| |||||||||||    
T  26941873 ggactaaatcccacc-gagtgttggccgcta 26941844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 50858425 - 50858330
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |  ||||||||||||||| |||||||||||||||| | ||||| |||| |||||||||||||||||    
T  50858425 cctaactcatccttacaaaaccggcttgtaagaggagtgcctcctctttataaactcttctcaagagtactatc-tatctgatgtgggactaaatcc 50858330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 15665253 - 15665155
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctct-tttaaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||| | |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  15665253 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctatataaactcttctcaagagtcctatc-tatccgatgtgggactaaatcc 15665155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 51469581 - 51469483
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| |||| |||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  51469581 cctaactcatccttacacaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatc-tatccgatgtgggactaaatcc 51469483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 600 - 693
Target Start/End: Original strand, 29669684 - 29669780
Alignment:
Q  600 taactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| |||| |||||||||||||||||    
T  29669684 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatc-tatctgatgtgggactaaatcc 29669780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 587 - 694
Target Start/End: Complemental strand, 2016643 - 2016533
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||| ||||| ||||||||| | |||||||| |||||| |||||||||   |||||||||||| |||||||||||||||||| ||||| |||| ||||||    
T  2016643 gaatgtcgaggcctaactcaactctacaaaatcggcttatacggtgaggagtgcctcctctttataaactcttctcaagaatcctatc-tatctgatgtg 2016545  T
Q  683 ggactaaatccc 694  Q
     |||||||||||    
T  2016544 agactaaatccc 2016533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 588 - 711
Target Start/End: Complemental strand, 4026183 - 4026058
Alignment:
Q  588 aatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgg 683  Q
    |||||| || |||||||||||||||| | |||||||  || ||||||   |||||| | ||| |||||||||||||||||| |||||| |||||||||||    
T  4026183 aatatcaaggcctaactcatccctacgacaccggctcatatggtgaggaatgcctcatatttataaactcttctcaagaatcctatct-atccgatgtgg 4026085  T
Q  684 gactaaatcccacctgagagttggccgc 711  Q
    |||||||||||| ||||| |||||||||    
T  4026084 gactaaatccca-ctgagtgttggccgc 4026058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 697
Target Start/End: Original strand, 37097735 - 37097837
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||| |||||||| ||   ||||| ||||||||| |||| ||||||||||||| ||||| |||| |||||||||||||||||    
T  37097735 cctaactcatccttacaaaacccgcttgtacagtgaggagtgtctcctctttataaaatcttctcaagaatcctatc-tatctgatgtgggactaaatcc 37097833  T
Q  694 cacc 697  Q
    ||||    
T  37097834 cacc 37097837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 45426940 - 45427038
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| |||||||||| |||||| |||   ||||||||||||||| |||||||||||||||| | ||||| ||||||||||||| ||||||||    
T  45426940 cctaactcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatc-tatccgatgtggggctaaatcc 45427038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 51470583 - 51470485
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcct-cttttaaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||| ||||||| ||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  51470583 cctaactcatccttacaaaaccggcttgtaaggtgaggagagcctcctccttataaactcttctcaagagtcctatc-tatccgatgtgggactaaatcc 51470485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 599 - 693
Target Start/End: Complemental strand, 991303 - 991206
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctc-ttttaaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||||||| ||||||||||||||||| |||   |||||||||||| || |||||||||||||||| |  |||| ||||||||||||||||||||||    
T  991303 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcattataaactcttctcaagagtgttatc-tatccgatgtgggactaaatcc 991206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 598 - 691
Target Start/End: Complemental strand, 990647 - 990551
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaat 691  Q
    |||||||||||| |||||||||| |||||| |||   ||||||||||||||| |||||||||||||||| |  |||| ||||||||||||||||||||    
T  990647 cctaactcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgttatc-tatccgatgtgggactaaat 990551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 5488467 - 5488375
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  ||| |||||||||||||||||    
T  5488467 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttat-ttatccgatgtgggact 5488375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 596 - 693
Target Start/End: Original strand, 27048410 - 27048510
Alignment:
Q  596 gacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaat 691  Q
    |||||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||| |||||  | ||||| || |||||||||||||||||    
T  27048410 gacctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagcttcctatc-taaccgatgtgggactaaat 27048508  T
Q  692 cc 693  Q
    ||    
T  27048509 cc 27048510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 43943773 - 43943681
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  |||| ||||||||||||||||    
T  43943773 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatc-tatccgatgtgggact 43943681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 598 - 691
Target Start/End: Complemental strand, 43972455 - 43972359
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaat 691  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| | |||| ||||||||| | ||||| ||||||||||||||||||||    
T  43972455 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatcaacttttctcaagagtcctatc-tatccgatgtgggactaaat 43972359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 22867184 - 22867086
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||| || ||| |||||||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| ||||||| ||||||||||||||    
T  22867184 cctaacacaaccccacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatc-tatccgacgtgggactaaatcc 22867086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 50858112 - 50858014
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   |||| |||| ||||| |||| ||||||||||| | ||||| ||||||||||||||||||||||    
T  50858112 cctaactcatccttacaaaaccggcttgtaaggtgaggagtacctcttctttataaaatcttctcaagagtactatc-tatccgatgtgggactaaatcc 50858014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 56509709 - 56509611
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| | |   ||||||||||||||| |||||||||||||||  | ||||| |||||||||| |||||||||||    
T  56509709 cctaactcatccgtacaaaaccggcttgtaagttgaggagtgcctcctctttataaactcttctcaagggtcctatc-tatccgatgtaggactaaatcc 56509611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 601 - 691
Target Start/End: Complemental strand, 29734658 - 29734565
Alignment:
Q  601 aactcatccctacaaaaccggcttgtacggt---gagtgcctcctctttta-aactcttctcaagaattctatcttatccgatgtgggactaaat 691  Q
    ||||||||| ||||||||||||||||| |||   ||||||||||||||| | |||||||||||| | | ||||| ||||||||||||||||||||    
T  29734658 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttaataactcttctcaaaagtcctatc-tatccgatgtgggactaaat 29734565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 599 - 713
Target Start/End: Original strand, 52810857 - 52810973
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctctttta-aactcttctcaagaattctatcttatccgatgtgggactaaatccc 694  Q
    |||| |||||| || ||||||||||| |||| ||||   |||||||||||||  ||||||||||||||||  | ||| ||||||||||||||||||||||    
T  52810857 ctaattcatccataaaaaaccggcttctacgatgagaagtgcctcctctttttgaactcttctcaagaatcttttct-atccgatgtgggactaaatccc 52810955  T
Q  695 acctgagagttggccgcta 713  Q
    ||| ||| |||||||||||    
T  52810956 acc-gagtgttggccgcta 52810973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 12016687 - 12016779
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  12016687 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 12016779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 12016895 - 12016987
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  12016895 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 12016987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 691
Target Start/End: Complemental strand, 23018570 - 23018474
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaat 691  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  |||| ||||||||||| || |||||    
T  23018570 cctaactcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaactcttctcaagagtcatatc-tatccgatgtgagattaaat 23018474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 662
Target Start/End: Original strand, 45427256 - 45427324
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaaga 662  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||||||||||    
T  45427256 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaaga 45427324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 596 - 687
Target Start/End: Original strand, 25753607 - 25753701
Alignment:
Q  596 gacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||||| ||||||||||||||||| ||||||   |||||||||||| ||||||||| |||||| |  | || ||||||||||||||||    
T  25753607 gacctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagtcttgtc-tatccgatgtgggact 25753701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 36558470 - 36558568
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   |||||| | |||||| |||||||||||||| | |  |||| ||||||||||||||||||||||    
T  36558470 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttactctttataaactcttctcaaaagtcatatc-tatccgatgtgggactaaatcc 36558568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 48843021 - 48843119
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||| ||||||| |||||||||||||| |||   ||||||||||||||| ||||||||| |||||| | ||||| |||| |||| ||||||||||||    
T  48843021 cctaactaatccctaaaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttttcaagagtcctatc-tatctgatgcgggactaaatcc 48843119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 53739966 - 53739868
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||| |||||| ||||||||||||||||| | |   |||| |||||||||| |||||||||||||||| | ||||| |||||||| |||||||||||||    
T  53739966 cctaaatcatccttacaaaaccggcttgtaagctgaggagttcctcctctttataaactcttctcaagagtactatc-tatccgatatgggactaaatcc 53739868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 611 - 697
Target Start/End: Original strand, 37288886 - 37288975
Alignment:
Q  611 tacaaaaccggcttgtacggtga---gtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcccacc 697  Q
    ||||||| |||||||||||| ||   ||| ||||| ||| ||||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  37288886 tacaaaatcggcttgtacggcgaagagtgtctcctttttataaactcttctcaagaatcatatct-atccgatgtgggactaaatcccacc 37288975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 27634330 - 27634422
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||| ||||||||| ||||||   |||||||||||| || ||||||||||||| |  |||| ||||||||||||||||    
T  27634330 cctaactcatccttacaaaatcggcttgtaaggtgagaattgcctcctctttatatactcttctcaagagtcttatc-tatccgatgtgggact 27634422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 662
Target Start/End: Complemental strand, 29113549 - 29113481
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    |||||||||||| ||||||||| ||||||| ||||||   |||||||||||| ||||||||||||||||    
T  29113549 cctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 29113481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 332 - 405
Target Start/End: Complemental strand, 38146817 - 38146743
Alignment:
Q  332 acaaatctaaatgtatctctatttttctaaactagacaatgacccctttcataa-acattaatagataccattct 405  Q
    ||||| ||| |||||||| ||||||||||||||||| ||||||||||| ||||| | ||| ||| ||||||||||    
T  38146817 acaaacctagatgtatctttatttttctaaactagataatgaccccttccataacaaattcataaataccattct 38146743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 713
Target Start/End: Complemental strand, 47845835 - 47845770
Alignment:
Q  647 taaactcttctcaagaattctatcttatccgatgtgggactaaatcccacctgagagttggccgcta 713  Q
    |||||||||||||||||  |||||| |||||| |||||||||||||||||| ||| |||||| ||||    
T  47845835 taaactcttctcaagaaacctatct-atccgacgtgggactaaatcccacccgagtgttggctgcta 47845770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 662
Target Start/End: Complemental strand, 52214715 - 52214647
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaaga 662  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||| ||||||    
T  52214715 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaaga 52214647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 13254483 - 13254385
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||| | ||||||||||| ||||| |||   ||||||||| ||||| |||||||||||||| | | ||||| ||||| ||||||||||||||||    
T  13254483 cctaactcatgcttacaaaaccgggttgtaaggtgaggagtgcctcatctttataaactcttctcaatagtcctatc-tatccaatgtgggactaaatcc 13254385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 21497687 - 21497785
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||  |||||  | | ||| || |||||||||||||||||||    
T  21497687 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttccaatc-taaccgatgtgggactaaatcc 21497785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 21498287 - 21498189
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||  |||||  | | ||| || |||||||||||||||||||    
T  21498287 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttccaatc-taaccgatgtgggactaaatcc 21498189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 17222671 - 17222768
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttttaaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||| ||||| ||||||||||||||||  ||||||   |||| || ||| ||||||||||| |||| | ||||| ||||| ||||||||||||||||    
T  17222671 cctaacacatccttacaaaaccggcttgtgaggtgaggattgcccccacttataaactcttcttaagagtgctatc-tatcctatgtgggactaaatcc 17222768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 596 - 693
Target Start/End: Original strand, 34205995 - 34206096
Alignment:
Q  596 gacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taa-actcttctcaagaattctatcttatccgatgtgggactaaa 690  Q
    |||||||||||||| ||||||||| ||||||| |||   ||||||||||||||| ||| |||||| |||||| |  |||| || ||||||||||||||||    
T  34205995 gacctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataagactcttatcaagagtcttatc-taaccgatgtgggactaaa 34206093  T
Q  691 tcc 693  Q
    |||    
T  34206094 tcc 34206096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 591 - 713
Target Start/End: Original strand, 52810622 - 52810746
Alignment:
Q  591 atcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggac 686  Q
    |||||| | |||||||||| || |||| |  |||||||||||||   || ||||||||| ||||||||||||||||||  |||| |||||||||| ||||    
T  52810622 atcgaggcttaactcatccatataaaatcaacttgtacggtgaggagtgtctcctctttataaactcttctcaagaatcttatc-tatccgatgtaggac 52810720  T
Q  687 taaatcccacctgagagttggccgcta 713  Q
    ||||| |||  |||| |||||||||||    
T  52810721 taaattcca-ttgagtgttggccgcta 52810746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 602 - 671
Target Start/End: Original strand, 52827240 - 52827313
Alignment:
Q  602 actcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatct 671  Q
    |||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||| |||||| | ||||||    
T  52827240 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatct 52827313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 428 - 478
Target Start/End: Complemental strand, 38146561 - 38146511
Alignment:
Q  428 ttctatataacttgtattgttcttggagttaattccccaatcaagatccct 478  Q
    ||||||||| |||||| | ||||| |||||||||||| |||||||||||||    
T  38146561 ttctatatagcttgtactattcttagagttaattcccaaatcaagatccct 38146511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 647 - 693
Target Start/End: Original strand, 43798184 - 43798229
Alignment:
Q  647 taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||||||||| |||| | |||||||||||||||||||||    
T  43798184 taaactcttctcaagaatcctatat-atccgatgtgggactaaatcc 43798229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 646
Target Start/End: Complemental strand, 28395277 - 28395226
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt 646  Q
    |||||||||||| ||||||||||||||||| ||||||   ||||||||||||    
T  28395277 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctcttt 28395226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 687
Target Start/End: Original strand, 49380898 - 49380976
Alignment:
Q  612 acaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  |||| ||||||||||| ||||    
T  49380898 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatc-tatccgatgtgagact 49380976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 6e-33; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 10450641 - 10450770
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||   ||||||||||||||| |||||||||||||||||  ||||| |||||||||||    
T  10450641 gaatatcgaggcctaactcatccccacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatc-tatccgatgtg 10450739  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| ||| |||||| ||||    
T  10450740 ggactaaatcccacccgagtgttggctgcta 10450770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 589 - 706
Target Start/End: Original strand, 11244536 - 11244656
Alignment:
Q  589 atatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtggg 684  Q
    ||||||||||||||||||||| |||||||||||||||||||||   ||||||||||||||| |||||||||||||||||  ||||| |||||||||||||    
T  11244536 atatcgagacctaactcatccttacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatc-tatccgatgtggg 11244634  T
Q  685 actaaatcccacctgagagttg 706  Q
    ||||||||||||| ||| ||||    
T  11244635 actaaatcccacccgagtgttg 11244656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 587 - 707
Target Start/End: Original strand, 48511632 - 48511755
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||| ||| |||||||||||| |||||||||||||||||||||   ||||||||||||||| |||||||||||||||| | ||||| |||||||||||    
T  48511632 gaatattgaggcctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatc-tatccgatgtg 48511730  T
Q  683 ggactaaatcccacctgagagttgg 707  Q
    ||||||||||||||| |||||||||    
T  48511731 ggactaaatcccacccgagagttgg 48511755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 591 - 713
Target Start/End: Original strand, 15820602 - 15820727
Alignment:
Q  591 atcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctc-ttttaaactcttctcaagaattctatcttatccgatgtgggac 686  Q
    |||||| ||||||||||||||||||||||||||||||||||   ||||| |||||| || |||||||||||||||||| ||||| |||||||||||||||    
T  15820602 atcgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgtctcctcgttataaactcttctcaagaatcctatc-tatccgatgtgggac 15820700  T
Q  687 taaatcccacctgagagttggccgcta 713  Q
    ||||||||||| ||| |||||| ||||    
T  15820701 taaatcccacccgagtgttggctgcta 15820727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 48511403 - 48511532
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||| ||| |||||||||||   |||||||||||||||||||||||   |||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  48511403 gaatattgaggcctaactcatctagacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagattcctatct-atccgatgtg 48511501  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| |||||||||||||||    
T  48511502 ggactaaatcccacccgagagttggccgcta 48511532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 42190470 - 42190598
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtga---gtgcctcctcttttaaactcttctcaagaattctatcttatccgatgtgg 683  Q
    |||||||||| |||||||||||| || |||| ||| |||||||||||   |||||||||||| |||||||||||||||| | |||||| |||||||||||    
T  42190470 gaatatcgaggcctaactcatccatataaaatcggtttgtacggtgaagagtgcctcctcttataaactcttctcaagattcctatct-atccgatgtgg 42190568  T
Q  684 gactaaatcccacctgagagttggccgcta 713  Q
    || ||||||||||| |||||||||||||||    
T  42190569 gattaaatcccacccgagagttggccgcta 42190598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 587 - 694
Target Start/End: Complemental strand, 24453889 - 24453779
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||||||||||||||||||| |||||||||||||||||||||   ||||||||||| ||| |||||||||||||||||  ||||| |||||||||||    
T  24453889 gaatatcgagacctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctgtttataaactcttctcaagaaccctatc-tatccgatgtg 24453791  T
Q  683 ggactaaatccc 694  Q
    ||||||||||||    
T  24453790 ggactaaatccc 24453779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 10450417 - 10450546
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctc-ttttaaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| ||||||||||||| |||||||| |||||||||||   |||||||||||| || |||||||||||||||||  ||||| |||||||||||    
T  10450417 gaatatcgaggcctaactcatccccacaaaaccagcttgtacggtgaggagtgcctcctcgttataaactcttctcaagaaacctatc-tatccgatgtg 10450515  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| ||| |||||| ||||    
T  10450516 ggactaaatcccacccgagtgttggctgcta 10450546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 632 - 713
Target Start/End: Complemental strand, 53966296 - 53966215
Alignment:
Q  632 gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||    
T  53966296 gagtgcctcctctttataaactcttctcaagaatcctatct-atccgatgtgggactaaatcccacccgagagttggccgcta 53966215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 587 - 697
Target Start/End: Original strand, 10856619 - 10856732
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| |||||||||||| |||||||||||||||||  ||   ||||||||||||||| ||||||||| |||||||| |||||  ||||||||||    
T  10856619 gaatatcgaggcctaactcatccttacaaaaccggcttgtatagtaaggagtgcctcctctttataaactcttttcaagaatcctatc-catccgatgtg 10856717  T
Q  683 ggactaaatcccacc 697  Q
    |||||||||||||||    
T  10856718 ggactaaatcccacc 10856732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 16060878 - 16061006
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||   ||||| ||| ||||| ||||||||||||||||||  |||  |||||||||||    
T  16060878 gaatatcgagacctaactcatccttacaaaaccagcttgtacggtgaagagtgtctcatctttataaactcttctcaagaatattat-atatccgatgtg 16060976  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||| | ||| |||||||||||    
T  16060977 ggactaaatcccatc-gagtgttggccgcta 16061006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 44573426 - 44573328
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  44573426 cctaactcatccttacaaaaccggcttgtagggtgaggagtgcctcctctttataaactcttctcaagagtactatc-tatccgatgtgggactaaatcc 44573328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 587 - 693
Target Start/End: Complemental strand, 9180479 - 9180370
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| ||||||| |||| ||||||||| |||||||||||   ||||| ||||||||| |||||| ||||||||||| ||||| |||||||||||    
T  9180479 gaatatcgaggcctaactgatccttacaaaaccagcttgtacggtgaggagtgtctcctctttataaacttttctcaagaatcctatc-tatccgatgtg 9180381  T
Q  683 ggactaaatcc 693  Q
    |||||||||||    
T  9180380 ggactaaatcc 9180370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 16051528 - 16051656
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    || ||| ||||| ||||||||||||||||||  ||| | ||| ||||||    
T  16051528 gaatatcgagacctaactcatccttacaaaaccggcttgtacggtgaagaatgtctcatctttataaactcttctcaagaatattatat-atctgatgtg 16051626  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    |||||||||||||  |||| |||||||||||    
T  16051627 ggactaaatccca-ttgagtgttggccgcta 16051656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 10453707 - 10453805
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||| |||||||||||| ||||| |||||||| |||||||||||||    
T  10453707 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaacccttctcaagaatcctatc-tatccgatctgggactaaatcc 10453805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 587 - 714
Target Start/End: Original strand, 16045363 - 16045492
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| |   ||||| ||| | ||| ||||||||||||||||||  |||  |||||||||||    
T  16045363 gaatatcgagacctaactcatccttacaaaaccagcttgtacgatgaagagtgtctcatatttataaactcttctcaagaatattat-atatccgatgtg 16045461  T
Q  683 ggactaaatcccacctgagagttggccgctag 714  Q
    ||||||||||||| | ||| ||||||||||||    
T  16045462 ggactaaatcccatc-gagtgttggccgctag 16045492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 600 - 693
Target Start/End: Original strand, 34715461 - 34715557
Alignment:
Q  600 taactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||| | | ||||| ||||||||||||||||||||||    
T  34715461 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaaaagtgctatc-tatccgatgtgggactaaatcc 34715557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 596 - 693
Target Start/End: Original strand, 38300285 - 38300386
Alignment:
Q  596 gacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaat 691  Q
    |||||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||  |||||  | |||||||| |||||||||||||||||    
T  38300285 gacctaactcatccttacaaaaccggcttgtaaggtggggagtgcctcctctttataaactctgatcaagcttcctatcttaaccgatgtgggactaaat 38300384  T
Q  692 cc 693  Q
    ||    
T  38300385 cc 38300386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 41380823 - 41380726
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacg--gtgagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||||| || ||||||||||||||||| |  ||||| ||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  41380823 cctaactcaaccttacaaaaccggcttgtaaggtgtgagggcctcctctttataaactcttctcaagagtgctatc-tatccgatgtgggactaaatcc 41380726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 588 - 693
Target Start/End: Complemental strand, 36020926 - 36020815
Alignment:
Q  588 aatatcgagacctaactcatccctacaaaaccggcttgtacgg---tgagtgcctcctcttt-taaactcttctcaagaattctatc--ttatccgatgt 681  Q
    ||||| ||| |||||||||||| ||||||| ||||||||||||   |||||||||||||||| |||||||||||||| |||  ||||  |||||||||||    
T  36020926 aatattgaggcctaactcatccatacaaaatcggcttgtacggtaatgagtgcctcctctttataaactcttctcaaaaatcatatctattatccgatgt 36020827  T
Q  682 gggactaaatcc 693  Q
    | ||||||||||    
T  36020826 gagactaaatcc 36020815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 713
Target Start/End: Complemental strand, 9179233 - 9179116
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| |||||||||| |||||| ||||||   ||| |||||||| ||||||||||||| ||||  | ||| |||||||||||||||||||||    
T  9179233 cctaactcatccttacaaaaccgacttgtaaggtgaggagtgcatcctctttataaactcttctcatgaatcatgtct-atccgatgtgggactaaatcc 9179135  T
Q  694 cacctgagagttggccgcta 713  Q
    |||| ||| |||||||||||    
T  9179134 cacc-gagtgttggccgcta 9179116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 13769295 - 13769393
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||| ||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| ||||| ||||||||||||||||    
T  13769295 cctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatc-tatccaatgtgggactaaatcc 13769393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 606 - 693
Target Start/End: Complemental strand, 27219421 - 27219331
Alignment:
Q  606 atccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| | |||||| |||||||||||||||||||||    
T  27219421 atccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatct-atccgatgtgggactaaatcc 27219331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 38300756 - 38300855
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||  |||||  | |||||||| |||||||||||||||||||    
T  38300756 cctaactcatccgtacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttcctatcttaaccgatgtgggactaaatcc 38300855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 44573739 - 44573641
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| || |||| ||||  ||||||||||||||||    
T  44573739 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagatttttatc-tatcttatgtgggactaaatcc 44573641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 45443380 - 45443282
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| || |||||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| ||||| ||||||||||||||||    
T  45443380 cctaactcatccttaaaaaaccggcttgtaaggtgaagagtgcctcctctttataaactcttctcaagagtgctatc-tatccaatgtgggactaaatcc 45443282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 600 - 693
Target Start/End: Original strand, 14170005 - 14170101
Alignment:
Q  600 taactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||| ||||||||||||||||| |||   ||||||||||||||| |||| ||||||||||| |  ||| |||||||||||||||||||||||    
T  14170005 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaaatcttctcaagagtgttat-ttatccgatgtgggactaaatcc 14170101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 49477634 - 49477542
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  |||| ||||||||||||||||    
T  49477634 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatc-tatccgatgtgggact 49477542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 3985873 - 3985775
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   |||||| |||||||| |||||||||||||| | |  |||| ||||||||||||||||||||||    
T  3985873 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactcttctcaaaagtcatatc-tatccgatgtgggactaaatcc 3985775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 587 - 694
Target Start/End: Original strand, 40769905 - 40770015
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||| ||| |||||||||||| |||||||||||||||||| ||   ||||| ||||||||| | |||||||| ||| |||  |||| |||||||||||    
T  40769905 gaatattgaggcctaactcatccatacaaaaccggcttgtacagtgaggagtgtctcctctttatgaactcttcacaataatcatatc-tatccgatgtg 40770003  T
Q  683 ggactaaatccc 694  Q
    ||||||||||||    
T  40770004 ggactaaatccc 40770015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 54369139 - 54369041
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||| ||||||| |||||  |||||   |||||||||||| |||||||||||||||| | |||||| |||||||||||||||||||||    
T  54369139 cctaactcatccttacgaaaccggtttgtaaagtgaggagtgcctcctctttataaactcttctcaagagtcctatct-atccgatgtgggactaaatcc 54369041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 9264090 - 9264182
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| || ||||||||||||| |  |||| ||||||||||||||||    
T  9264090 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatc-tatccgatgtgggact 9264182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 50692423 - 50692331
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  50692423 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 50692331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 51642639 - 51642731
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| || ||||||||||||| |  |||| ||||||||||||||||    
T  51642639 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatc-tatccgatgtgggact 51642731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 662
Target Start/End: Original strand, 39078775 - 39078843
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| ||||||||||||||||    
T  39078775 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 39078843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 662
Target Start/End: Original strand, 39956678 - 39956746
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| ||||||||||||||||    
T  39956678 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 39956746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 693
Target Start/End: Original strand, 43101378 - 43101473
Alignment:
Q  601 aactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||||| ||||||||||  ||||| ||||||   |||||||||||| |||||||||||||||| | |||||| ||| |||||||||||||||||    
T  43101378 aactcatccttacaaaaccgatttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatct-atctgatgtgggactaaatcc 43101473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 662
Target Start/End: Complemental strand, 44574036 - 44573968
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaaga 662  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||||||||||    
T  44574036 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaaga 44573968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 600 - 710
Target Start/End: Complemental strand, 9179005 - 9178893
Alignment:
Q  600 taactcatccctacaaaaccggcttgtacggtga---gtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatccca 695  Q
    |||||||||| | |||||| |||||||| |||||   ||| ||||||||| ||||||||||| |||||| |||||| ||||||| ||||||||||| |||    
T  9179005 taactcatccttccaaaactggcttgtaaggtgaagagtgtctcctctttataaactcttcttaagaatcctatct-atccgatatgggactaaattcca 9178907  T
Q  696 cctgagagttggccg 710  Q
    || ||| ||||||||    
T  9178906 cc-gagtgttggccg 9178893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 9264297 - 9264389
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| || ||||||||||||| |  | || ||||||||||||||||    
T  9264297 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttgtc-tatccgatgtgggact 9264389  T

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Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 9264504 - 9264596
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| |||||||||||||||||  |||||   |||||||||||| || ||||||||||||| |  |||| ||||||||||||||||    
T  9264504 cctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttatatactcttctcaagagtcttatc-tatccgatgtgggact 9264596  T

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Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 22339841 - 22339749
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| |||||||||| |||||| ||||||   |||||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  22339841 cctaactcatccttacaaaaccgacttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 22339749  T

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Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 22407445 - 22407537
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| || ||||||||| ||| || | || ||||||||||||||||    
T  22407445 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatatactcttctcgagagttttgtc-tatccgatgtgggact 22407537  T

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Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 42259010 - 42258918
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| | ||||| ||||||||| ||||||   |||||||||||| || |||||||||||||||  |||| ||||||||||||||||    
T  42259010 cctaactcatccttgcaaaatcggcttgtaaggtgaggattgcctcctctttatatactcttctcaagaatcttatc-tatccgatgtgggact 42258918  T

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Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 50692626 - 50692534
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| ||||||||| |||||| |  | || ||||||||||||||||    
T  50692626 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagtcttgtc-tatccgatgtgggact 50692534  T

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Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 693
Target Start/End: Original strand, 10453929 - 10453987
Alignment:
Q  632 gagtgcctcctcttttaaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||||||  ||||||||||| |||| |||| |||||||||||||||||||||||    
T  10453929 gagtgcctcctcttt--aactcttctcatgaatcctat-ttatccgatgtgggactaaatcc 10453987  T

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Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 693
Target Start/End: Original strand, 47833703 - 47833764
Alignment:
Q  632 gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||||||||||| ||||| |||||||||| | |||||| |||||||||||||||||||||    
T  47833703 gagtgcctcctctttataaacacttctcaagagtcctatct-atccgatgtgggactaaatcc 47833764  T

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Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 662
Target Start/End: Complemental strand, 49477427 - 49477359
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||| |||||||||    
T  49477427 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaacttttctcaaga 49477359  T

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Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 690
Target Start/End: Original strand, 50203861 - 50203956
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaa 690  Q
    |||||||||||| ||||||||||| || || |||   ||||||||||||||| |||||||||||||||| |  |||| ||||||||||| |||||||    
T  50203861 cctaactcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaactcttctcaagagtcttatc-tatccgatgtgagactaaa 50203956  T

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Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 599 - 687
Target Start/End: Original strand, 51338446 - 51338537
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    ||||||||||| ||||||||||||||||| ||||||   |||||||||||| || ||||||||||||| |  |||| |||| |||||||||||    
T  51338446 ctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatc-tatctgatgtgggact 51338537  T

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Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 662
Target Start/End: Original strand, 51642432 - 51642500
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| || |||||||||||||    
T  51642432 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaaga 51642500  T

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Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 693
Target Start/End: Original strand, 51734614 - 51734659
Alignment:
Q  647 taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||    
T  51734614 taaactcttctcaagaatcctatct-atccgatgtgggactaaatcc 51734659  T

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Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 21750575 - 21750477
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| |||||||| |||||||| |||   ||||||||||||||| ||||||||  |||||  | ||||| || |||||||||||||||||||    
T  21750575 cctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttcctatc-taaccgatgtgggactaaatcc 21750477  T

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Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 598 - 683
Target Start/End: Original strand, 19820532 - 19820619
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgg 683  Q
    |||||||||||| ||||||||||| ||||| ||||||   || ||||||||| |||||||||||||||| || ||  |||||||||||||    
T  19820532 cctaactcatccttacaaaaccggtttgtaaggtgaggattgtctcctctttataaactcttctcaagagtttta--ttatccgatgtgg 19820619  T

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Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 4191126 - 4191218
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| |||   || || ||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  4191126 cctaactcatccttacaaaaccggcttgtaaggtcaggattgtctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 4191218  T

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Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 686
Target Start/End: Complemental strand, 11414463 - 11414373
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggac 686  Q
    |||||||||||| |||||||||||||| || ||||||   || ||||||||| |||||||||||||||| |  ||  ||||||||||||||||    
T  11414463 cctaactcatccttacaaaaccggcttctaaggtgaggattgtctcctctttataaactcttctcaagagtctta--ttatccgatgtgggac 11414373  T

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Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 22407652 - 22407744
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| || ||||||||| ||| |  | || ||||||||||||||||    
T  22407652 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatatactcttctcgagagtcttgtc-tatccgatgtgggact 22407744  T

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Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 619 - 692
Target Start/End: Original strand, 22666343 - 22666419
Alignment:
Q  619 cggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatc 692  Q
    ||||||||||||||||   || | ||||||| |||||||||||||||||| ||||| ||||||| |||||||||||||    
T  22666343 cggcttgtacggtgaggagtgacgcctctttataaactcttctcaagaatcctatc-tatccgacgtgggactaaatc 22666419  T

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Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 37223675 - 37223583
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacgg---tgagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||| ||| ||||||||||||||||| ||   ||| |||||||||||| ||||||||||||| || |  |||| ||||||||||||||||    
T  37223675 cctaactcttccttacaaaaccggcttgtaaggtgatgattgcctcctctttataaactcttctcaggagtcttatc-tatccgatgtgggact 37223583  T

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Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 48685316 - 48685419
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag--------tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggacta 688  Q
    |||||||||||| |||||||||||||||||  |||||        || ||||||||| |||||||||||||||| | |||| | ||||||||||||||||    
T  48685316 cctaactcatccttacaaaaccggcttgtattgtgaggtgaggagtgtctcctctttataaactcttctcaagagtactatat-atccgatgtgggacta 48685414  T
Q  689 aatcc 693  Q
    |||||    
T  48685415 aatcc 48685419  T

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Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 697
Target Start/End: Original strand, 48837068 - 48837114
Alignment:
Q  650 actcttctcaagaattctatcttatccgatgtgggactaaatcccacc 697  Q
    ||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  48837068 actcttctcaataatcctatct-atccgatgtgggactaaatcccacc 48837114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 611 - 687
Target Start/End: Complemental strand, 54495618 - 54495539
Alignment:
Q  611 tacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    ||||||||||||||||| ||||||   || ||||||||| |||||||||||||||| |  |||| ||||||||||||||||    
T  54495618 tacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatc-tatccgatgtgggact 54495539  T

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Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 4255610 - 4255512
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| | |||||||||||||||  ||   |||||| |||||||| |||| ||||||||||| | |||||  ||| |||||||||||||||||    
T  4255610 cctaactcatccttgcaaaaccggcttgtaaagtgaggagtgcatcctctttataaattcttctcaagagtgctatc-catctgatgtgggactaaatcc 4255512  T

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Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 25627924 - 25628017
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt--taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| |||||||||  |||||| ||||||   ||||||||||||  || |||||||| ||||||  |||| ||||||||||||||||    
T  25627924 cctaactcatccttacaaaaccaacttgtaaggtgaggattgcctcctcttttatatactcttctgaagaatcttatc-tatccgatgtgggact 25628017  T

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Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 600 - 687
Target Start/End: Original strand, 53640178 - 53640268
Alignment:
Q  600 taactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||| |||| |||||||||||| ||||||   |||||||||||| || ||||||||||||| |  |||| |||| |||||||||||    
T  53640178 taactcatccttacataaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatc-tatctgatgtgggact 53640268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 587 - 628
Target Start/End: Complemental strand, 53966364 - 53966323
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtac 628  Q
    |||||| ||| |||||||||||| ||||||||||||||||||    
T  53966364 gaatattgaggcctaactcatccatacaaaaccggcttgtac 53966323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 2e-30; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 26842831 - 26842702
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| ||||||||||||| |||||||| |||||||||||   ||||||||||||||| |||||||||||||||||  ||||| |||||||||||    
T  26842831 gaatatcgaggcctaactcatccccacaaaaccagcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatc-tatccgatgtg 26842733  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
    ||||||||||||||| ||| |||||| ||||    
T  26842732 ggactaaatcccacccgagtgttggctgcta 26842702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 587 - 697
Target Start/End: Complemental strand, 25184321 - 25184208
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||||   ||| |||||||| ||||||||| |||||||| ||||| ||||||||| |    
T  25184321 gaatatcgaggcctaactcatccccacaaaaccggcttgtaaggtgaggattgcttcctctttataaactcttatcaagaatcctatc-tatccgatgcg 25184223  T
Q  683 ggactaaatcccacc 697  Q
    |||||||||||||||    
T  25184222 ggactaaatcccacc 25184208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 598 - 693
Target Start/End: Complemental strand, 8144117 - 8144019
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  8144117 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatc-tatccgatgtgggactaaatcc 8144019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 598 - 713
Target Start/End: Complemental strand, 33396407 - 33396289
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtac---ggtgagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||| |||| |||   |  ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  33396407 cctaactcatccttacaaaaccagcttttacaatgaggagtgcctcctctttataaactcttctcaagaatcctatc-tatccgatgtgggactaaatcc 33396309  T
Q  694 cacctgagagttggccgcta 713  Q
    ||||  || |||||||||||    
T  33396308 caccctagtgttggccgcta 33396289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 588 - 713
Target Start/End: Complemental strand, 25184113 - 25183985
Alignment:
Q  588 aatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgg 683  Q
    ||||||||| ||||||| ||||| |||||||||||||||||||||||   || || |||||| ||||||||| ||||||||  |||| ||||||||| ||    
T  25184113 aatatcgaggcctaacttatccccacaaaaccggcttgtacggtgaggattgtcttctctttataaactcttatcaagaatcttatc-tatccgatgcgg 25184015  T
Q  684 gactaaatcccacctgagagttggccgcta 713  Q
    |||||||||||||| ||| |||||| ||||    
T  25184014 gactaaatcccacccgagtgttggctgcta 25183985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 24055113 - 24055211
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||| ||||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  24055113 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcgtctttataaactcttctcaagagtgctatc-tatccgatgtgggactaaatcc 24055211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 10418342 - 10418440
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||  |||||| | ||||| ||||||||||||||||||||||    
T  10418342 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctcatcaagagtgctatc-tatccgatgtgggactaaatcc 10418440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 713
Target Start/End: Complemental strand, 33396616 - 33396508
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcccac 696  Q
    |||||||||||| |||||||||||||| ||      ||||||||||||| |||||||||||||| ||| |||||| ||||||||||| ||||||||||||    
T  33396616 cctaactcatccttacaaaaccggctttta------gtgcctcctctttataaactcttctcaaaaatcctatct-atccgatgtgg-actaaatcccac 33396525  T
Q  697 ctgagagttggccgcta 713  Q
    | ||| |||||||||||    
T  33396524 ccgagtgttggccgcta 33396508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 587 - 697
Target Start/End: Complemental strand, 8427661 - 8427548
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||| ||||||||| || |||||||||| ||||||||||   ||||||||||||||| ||||||||||||||||||  |||  |||||||||||    
T  8427661 gaatatcgaggcctaactcaaccttacaaaaccgacttgtacggtgaggagtgcctcctctttctaaactcttctcaagaatcttat-atatccgatgtg 8427563  T
Q  683 ggactaaatcccacc 697  Q
      |||||||| ||||    
T  8427562 aaactaaatctcacc 8427548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 598 - 686
Target Start/End: Complemental strand, 28149893 - 28149802
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggac 686  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| ||||||||| |||||| || |||| |||||||||||||||    
T  28149893 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagttttatc-tatccgatgtgggac 28149802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 1744846 - 1744940
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaa 689  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||| |||||| | ||||| ||||| ||||||||||||    
T  1744846 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttttcaagagtactatc-tatccaatgtgggactaa 1744940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 12134487 - 12134581
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaa 689  Q
    |||||||||||| ||||||||||| ||||| |||   ||||| ||||||||| |||||||||||||||| | ||||| ||||||||||||||||||    
T  12134487 cctaactcatccttacaaaaccggtttgtaaggttaggagtgtctcctctttataaactcttctcaagagtgctatc-tatccgatgtgggactaa 12134581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 21067061 - 21067159
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||| ||||  ||||||||||||||||| || |||   |||||||||||| |||||||||||||||||| ||||| |||||||| |||||||||||||    
T  21067061 cctaacacatctttacaaaaccggcttgtaaggggaggagtgcctcctctttataaactcttctcaagaatgctatc-tatccgatatgggactaaatcc 21067159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 21088852 - 21088950
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||| ||||  ||||||||||||||||| || |||   |||||||||||| |||||||||||||||||| ||||| |||||||| |||||||||||||    
T  21088852 cctaacacatctttacaaaaccggcttgtaaggggaggagtgcctcctctttataaactcttctcaagaatgctatc-tatccgatatgggactaaatcc 21088950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 19054592 - 19054499
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaa 689  Q
    ||||||||||| ||||||||||||||||| |||   ||||||||| ||||| |||||||||||||||| |  |||| ||||||||||||||||||    
T  19054592 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcatctttataaactcttctcaagagtgttatc-tatccgatgtgggactaa 19054499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 15101115 - 15101207
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  15101115 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 15101207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 16877014 - 16877106
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  16877014 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 16877106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 10733442 - 10733540
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| ||||||||||||||||| |||   ||||| ||||||||| |||||||||||||||| |  |||| | ||| ||||||||||||||||    
T  10733442 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactcttctcaagagtgttatc-tgtccaatgtgggactaaatcc 10733540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 587 - 694
Target Start/End: Original strand, 26339839 - 26339945
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtggga 685  Q
    |||||||||  |||||||||||| | ||||||||||| |  ||  |||||| |||||||| |||||||||||||||| |  ||||| |||||||||||||    
T  26339839 gaatatcgaagcctaactcatcctttcaaaaccggctagc-cgaagagtgcatcctctttataaactcttctcaagattcttatct-atccgatgtggga 26339936  T
Q  686 ctaaatccc 694  Q
    |||||||||    
T  26339937 ctaaatccc 26339945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 587 - 635
Target Start/End: Complemental strand, 30718792 - 30718744
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgagt 635  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  30718792 gaatatcgagacttaactcatccacacaaaaccggcttgtacggtgagt 30718744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 598 - 671
Target Start/End: Original strand, 19712613 - 19712690
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatct 671  Q
    |||||||||||| ||||||||| ||||||| ||||||   |||||||||||| |||||||||||||||| | ||||||    
T  19712613 cctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtgctatct 19712690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 599 - 687
Target Start/End: Original strand, 5269278 - 5269369
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    ||||||||||| ||||||||||||||||| ||||||   ||||| |||||| |||||||||||||||| |  |||| ||||||||||| ||||    
T  5269278 ctaactcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactcttctcaagagtcttatc-tatccgatgtgagact 5269369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 662
Target Start/End: Original strand, 16876834 - 16876902
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    |||||||||||| ||||||||||||||||| ||||||   |||||||||||| |||||| |||||||||    
T  16876834 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactattctcaaga 16876902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 685
Target Start/End: Original strand, 11313386 - 11313476
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtggga 685  Q
    |||||||||||| |||||||| |||||||| ||||||   |||||||||||| || ||||||||||||| |  |||| ||||||||||||||    
T  11313386 cctaactcatccttacaaaactggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatc-tatccgatgtggga 11313476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 587 - 713
Target Start/End: Complemental strand, 13673966 - 13673838
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtga---gtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtg 682  Q
    |||||||||  ||||||||||| |||||||| ||| |||||||||||   | | |||||| || |||||||||||||||||  ||||| |||| ||||||    
T  13673966 gaatatcgaagcctaactcatcactacaaaatcggtttgtacggtgatgagggtctcctcattataaactcttctcaagaaacctatc-tatctgatgtg 13673868  T
Q  683 ggactaaatcccacctgagagttggccgcta 713  Q
     || ||||| ||| ||||| |||||||||||    
T  13673867 agattaaattcca-ctgagtgttggccgcta 13673838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 24558683 - 24558591
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    ||||||||||||  |||||||||||||||| ||||||   |||||||||||| || ||||||||||||| |  |||| |||| |||||||||||    
T  24558683 cctaactcatcctcacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatc-tatctgatgtgggact 24558591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 632 - 693
Target Start/End: Original strand, 21043822 - 21043883
Alignment:
Q  632 gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||| |||||| |||||||||||||||| | |||||| ||||||| |||||||||||||    
T  21043822 gagtgccttctctttataaactcttctcaagagtgctatct-atccgatatgggactaaatcc 21043883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 647 - 693
Target Start/End: Original strand, 27582126 - 27582171
Alignment:
Q  647 taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||||    
T  27582126 taaactcttctcaagaattttatc-tatccgttgtgggactaaatcc 27582171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 598 - 654
Target Start/End: Original strand, 27914330 - 27914390
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactct 654  Q
    |||||||||||| ||||||||||||||||| |||   ||||||||||||||| ||||||||    
T  27914330 cctaactcatccttacaaaaccggcttgtaaggtaaggagtgcctcctctttataaactct 27914390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 646
Target Start/End: Original strand, 17147909 - 17147960
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt 646  Q
    |||||||||||| ||||||||||||||||| ||||||   ||||||||||||    
T  17147909 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctcttt 17147960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 693
Target Start/End: Original strand, 19753608 - 19753706
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatcc 693  Q
    |||||||||||| |||| ||||| |||||| |||   ||||| || |||||| |||||||||||||||| | ||||| ||| | ||||||||||||||||    
T  19753608 cctaactcatccttacagaaccgtcttgtaaggtgaggagtgtcttctctttataaactcttctcaagagtcctatc-tataccatgtgggactaaatcc 19753706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 587 - 713
Target Start/End: Original strand, 34643 - 34772
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttttaaactcttctcaagaattctatcttatccgatgtgg 683  Q
    |||||||||| ||||| ||||||| |||||||||| ||||| ||||||   ||||||||||| |||||||||||||||| | ||||| |||||||| |||    
T  34643 gaatatcgaggcctaaatcatccccacaaaaccggtttgtaaggtgaggagtgcctcctcttataaactcttctcaagattcctatc-tatccgatatgg 34741  T
Q  684 gactaaatccca-cctgagagttggccgcta 713  Q
    ||||||||| || || |||||||||||||||    
T  34742 gactaaatctcaccccgagagttggccgcta 34772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 587 - 634
Target Start/End: Original strand, 34498 - 34545
Alignment:
Q  587 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 634  Q
    ||||||||||  ||||||||| | ||||||||||||||||||||||||    
T  34498 gaatatcgaggtctaactcattcttacaaaaccggcttgtacggtgag 34545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 608 - 694
Target Start/End: Complemental strand, 165874 - 165785
Alignment:
Q  608 ccctacaaaaccggcttgtacggt---gagtgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggactaaatccc 694  Q
    ||||||||||||||||||||||||   ||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||    
T  165874 ccctacaaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagaattctatc-tatccgatgtaggactaaatccc 165785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0785 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0785
Description:

Target: scaffold0785; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 589 - 695
Target Start/End: Original strand, 3115 - 3224
Alignment:
Q  589 atatcgagacctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtggg 684  Q
    |||||||| |||||||||||| || |||||| |||| || ||||||   || ||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  3115 atatcgaggcctaactcatccttataaaaccagcttctatggtgaggagtgtctcctctttataaactcttctcaaaaattctatct-atccgatgtggg 3213  T
Q  685 actaaatccca 695  Q
    |||||||||||    
T  3214 actaaatccca 3224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 76952 - 76860
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||  ||||||||||||||||| ||||||   |||||||||||| |||||||||||||||| |  |||| ||||||||||||||||    
T  76952 cctaactcatctttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatc-tatccgatgtgggact 76860  T

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Target: scaffold0434 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 662
Target Start/End: Complemental strand, 13406 - 13338
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    ||||||||||||  |||||||||||||||| ||||||   |||||||||||| ||||||||||||||||    
T  13406 cctaactcatcctcacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 13338  T

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Target: scaffold0434; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 598 - 662
Target Start/End: Complemental strand, 13613 - 13545
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    ||||||||||||   ||||||||||||||| ||||||   |||||||||||| ||||||||||||||||    
T  13613 cctaactcatcctcgcaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 13545  T

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Target: scaffold0989 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 2951 - 3043
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| ||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  2951 cctaactcatccttacaaaaccagcttgtaaagtgaggattgcctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 3043  T

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Target: scaffold0054 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 687
Target Start/End: Original strand, 21267 - 21359
Alignment:
Q  598 cctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaagaattctatcttatccgatgtgggact 687  Q
    |||||||||||| |||||||||  |||||| ||||||   |||||||||||| |||||||||||||||| |  | || ||||||||||||||||    
T  21267 cctaactcatccttacaaaaccaacttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtc-tatccgatgtgggact 21359  T

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Target: scaffold0419 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 599 - 662
Target Start/End: Original strand, 4244 - 4311
Alignment:
Q  599 ctaactcatccctacaaaaccggcttgtacggtgag---tgcctcctcttt-taaactcttctcaaga 662  Q
    ||||||||||| ||||||||||||||||| ||||||   | |||||||||| || |||||||||||||    
T  4244 ctaactcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactcttctcaaga 4311  T

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