View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16798_low_38 (Length: 321)
Name: NF16798_low_38
Description: NF16798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16798_low_38 |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 39 - 307
Target Start/End: Complemental strand, 35305667 - 35305399
Alignment:
| Q |
39 |
gagaaagagaaaaatgagagttttttattgaaaagatatcaactgtacaattaattccaatcaaaattaaagtagcatatatgaaaatgtgcaatgtttg |
138 |
Q |
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| T |
35305667 |
gagaaagagaaaaatgagagttttttattgaaaagatatcaactgtacaattaagtccaaccaaaattaaagtagcatatatgaaaatgtgcaatttttg |
35305568 |
T |
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| Q |
139 |
tcgnnnnnnngagagatgcaatgtttgtcgttgattgtaggtttttgttgtgaatgcaatcttatttctcctttcttcttcagtctaaaaaccgattcat |
238 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
35305567 |
tcatttttttgagagatgcaatgtttgtcgttgattgtaggtttttgttgtgaatgcaatcttatttctcctttcttcttcaatctaaaaaccgattcat |
35305468 |
T |
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| Q |
239 |
cagtcttccaccttaattcaaggatcaaacatagattaattattttcttaatcaaatggtaattgtttt |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35305467 |
cagtcttccaccttaattcaaggatcaaacatagattaattattttcttaatcaaatggtaattgtttt |
35305399 |
T |
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