View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16802_low_7 (Length: 259)
Name: NF16802_low_7
Description: NF16802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16802_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 16 - 253
Target Start/End: Complemental strand, 2833292 - 2833055
Alignment:
| Q |
16 |
aaaatgaataagatcaagaaaatactaggaagatttgcaaaatgagataagaatcatagtatgataccaagaatatagaagaacaatggaaacaaataaa |
115 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2833292 |
aaaatgaataagatcaagaaaatactagtaagatttgcaaaatgaaataagaatcatagtatgataccaagaatatagaagaacaatggaaacaaataaa |
2833193 |
T |
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| Q |
116 |
gggtagaagagaagttttgatatcatcacctaaataaagttagagagaatgaaaggcaagtctggtttgaagaattaatcatttgatgtcgtttcatatg |
215 |
Q |
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||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2833192 |
gggtagaagagaagtattgatatattcacctaaatagagttagagagaatgaaaggcaagtctggtttgaagaattaatcatttgatgtcgtttcatatg |
2833093 |
T |
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| Q |
216 |
aaaatgagtgtttattttatagtattgttgatgatgtc |
253 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
2833092 |
aaaatgagtgtttattttatagtattgttgatgatgtc |
2833055 |
T |
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