View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16803_high_45 (Length: 270)
Name: NF16803_high_45
Description: NF16803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16803_high_45 |
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Alignment Details
Target: chr1 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 45595701 - 45595444
Alignment:
| Q |
1 |
ttcacctttcataccattattaaattccattacatatttatatgcttttcaatgttaataattatcctcatgcatttatgacacttatatttaagtcggt |
100 |
Q |
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| T |
45595701 |
ttcacctttcataccattattaaattccattacatatttatatgcttttcaatgttaataattatcctcatgcatttatgacacttatatttaagtcggt |
45595602 |
T |
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| Q |
101 |
ttacttccacagcactctttcttatcttctctcttacccttatgatgaataatggactctgaatttgttttcagctattaaaaacactaagaaaaagaca |
200 |
Q |
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| T |
45595601 |
ttacttccacagcactctttcttatcttctctcttacccttatgatgaataatggactctgaatttgttttcagctattaaaaacactaagaaaaagaca |
45595502 |
T |
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| Q |
201 |
aagttgtgtgtcattattgttatttattgtggtaatgagttggtgaaagtgaaaaatg |
258 |
Q |
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| T |
45595501 |
aagttgtgtgtcattattgttatttattgtggtaatgagttggtgaaagtgaaaaatg |
45595444 |
T |
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