View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16803_low_5 (Length: 566)

Name: NF16803_low_5
Description: NF16803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16803_low_5
NF16803_low_5
[»] chr1 (5 HSPs)
chr1 (17-547)||(5922116-5922646)
chr1 (321-449)||(267085-267213)
chr1 (321-443)||(28126426-28126548)
chr1 (379-443)||(26137255-26137319)
chr1 (385-440)||(28132255-28132310)
[»] chr6 (54 HSPs)
chr6 (244-536)||(29469444-29469736)
chr6 (244-544)||(28479019-28479319)
chr6 (244-544)||(29791474-29791774)
chr6 (244-539)||(28490142-28490437)
chr6 (244-539)||(29802552-29802847)
chr6 (244-544)||(29695036-29695336)
chr6 (265-539)||(29727605-29727879)
chr6 (244-544)||(29759096-29759396)
chr6 (241-454)||(28326707-28326920)
chr6 (241-454)||(28504343-28504556)
chr6 (241-454)||(28186623-28186836)
chr6 (305-453)||(29842733-29842881)
chr6 (321-447)||(27609867-27609993)
chr6 (241-454)||(28244024-28244237)
chr6 (244-443)||(27705005-27705204)
chr6 (305-453)||(29827279-29827427)
chr6 (373-454)||(28296480-28296561)
chr6 (373-454)||(28515512-28515593)
chr6 (321-445)||(26624580-26624704)
chr6 (321-445)||(26730557-26730681)
chr6 (324-444)||(27697336-27697456)
chr6 (316-447)||(28140839-28140970)
chr6 (321-447)||(27680259-27680385)
chr6 (322-443)||(26862890-26863011)
chr6 (321-445)||(31285868-31285992)
chr6 (323-442)||(26825130-26825249)
chr6 (321-443)||(27426363-27426485)
chr6 (376-443)||(28097194-28097261)
chr6 (34-137)||(29469141-29469244)
chr6 (321-443)||(26885376-26885498)
chr6 (373-443)||(27530055-27530125)
chr6 (373-451)||(27663957-27664035)
chr6 (321-445)||(26647788-26647912)
chr6 (321-445)||(26753756-26753880)
chr6 (321-445)||(26803755-26803879)
chr6 (321-441)||(27717252-27717372)
chr6 (379-445)||(27591770-27591836)
chr6 (334-443)||(27215774-27215883)
chr6 (244-445)||(29673758-29673959)
chr6 (373-445)||(27603453-27603525)
chr6 (377-445)||(27676369-27676437)
chr6 (49-105)||(28479554-28479610)
chr6 (373-445)||(28787599-28787671)
chr6 (373-445)||(28793720-28793792)
chr6 (49-105)||(29792009-29792065)
chr6 (382-437)||(28240723-28240778)
chr6 (241-284)||(28296650-28296693)
chr6 (241-276)||(28515380-28515415)
chr6 (373-544)||(28901966-28902137)
chr6 (413-456)||(29523302-29523345)
chr6 (373-443)||(26812889-26812959)
chr6 (374-443)||(25581084-25581153)
chr6 (241-285)||(28140764-28140808)
chr6 (413-449)||(29473835-29473871)
[»] chr8 (4 HSPs)
chr8 (244-544)||(12589973-12590273)
chr8 (244-433)||(35984531-35984720)
chr8 (373-432)||(31906415-31906474)
chr8 (384-443)||(29272589-29272648)
[»] scaffold0012 (2 HSPs)
scaffold0012 (305-544)||(238515-238754)
scaffold0012 (244-544)||(211771-212071)
[»] chr3 (2 HSPs)
chr3 (244-544)||(615028-615328)
chr3 (49-105)||(614737-614793)
[»] chr5 (2 HSPs)
chr5 (241-455)||(16692096-16692310)
chr5 (377-447)||(13717563-13717635)
[»] scaffold0038 (2 HSPs)
scaffold0038 (241-454)||(44186-44399)
scaffold0038 (382-437)||(40885-40940)
[»] chr2 (5 HSPs)
chr2 (328-443)||(3280975-3281090)
chr2 (242-290)||(17662501-17662549)
chr2 (242-290)||(17713527-17713575)
chr2 (370-442)||(17991967-17992039)
chr2 (243-284)||(3280890-3280931)
[»] scaffold0003 (1 HSPs)
scaffold0003 (321-443)||(60878-61000)
[»] chr4 (8 HSPs)
chr4 (321-443)||(18075070-18075192)
chr4 (373-445)||(18688371-18688443)
chr4 (373-445)||(18698145-18698217)
chr4 (373-445)||(18730249-18730321)
chr4 (319-445)||(18722830-18722956)
chr4 (373-445)||(18678305-18678377)
chr4 (241-275)||(5089869-5089903)
chr4 (311-445)||(18654222-18654356)
[»] scaffold0007 (3 HSPs)
scaffold0007 (411-544)||(32365-32498)
scaffold0007 (411-544)||(37114-37247)
scaffold0007 (373-544)||(67674-67845)
[»] scaffold1870 (1 HSPs)
scaffold1870 (321-445)||(78-202)
[»] scaffold0277 (2 HSPs)
scaffold0277 (321-445)||(3461-3585)
scaffold0277 (321-445)||(12424-12548)
[»] scaffold0019 (1 HSPs)
scaffold0019 (241-452)||(57036-57247)
[»] scaffold0419 (1 HSPs)
scaffold0419 (321-445)||(8796-8920)
[»] scaffold0349 (1 HSPs)
scaffold0349 (321-441)||(2292-2412)
[»] scaffold0573 (1 HSPs)
scaffold0573 (373-544)||(7657-7828)


Alignment Details
Target: chr1 (Bit Score: 523; Significance: 0; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 523; E-Value: 0
Query Start/End: Original strand, 17 - 547
Target Start/End: Complemental strand, 5922646 - 5922116
Alignment:
Q  17 agaaacaattggatgcaattgctggaggaaatgattggtatggtctcggcagtagagtcatcatcacaacccgggacaaagggttgctattgtctcacgg 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5922646 agaaacaattggatgcaattgctggaggaaatgattggtatggtctcggcagtagagtcatcatcacaacccgggacaaagggttgctattgtctcacgg 5922547  T
Q  117 ggttgaaagtacgtatgaggtccatgaattgaacaagaaggatgcttttgaattgcttagacaaaaagcatttaaaaccaacaaagtttgtccaaattat 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5922546 ggttgaaagtacgtatgaggtccatgaattgaacaagaaggatgcttttgaattgcttagacaaaaagcatttaaaaccaacaaagtttgtccaaattat 5922447  T
Q  217 gcggatgttttgaatcgtgccttgacttatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgta 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5922446 gcggatgttttgaatcgtgccttgactcatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgta 5922347  T
Q  317 aatctacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttt 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5922346 aatctacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttt 5922247  T
Q  417 tcttgatattgcttgttgcttcaaaggatatgatttgacattcgtcaataaaatgcttcatgctcatcatggtgacaacatggaagatcacatgcaggtg 516  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5922246 tcttgatattgcttgttgcttcaaaggatatgatttgacaatcgtcaataaaatgcttcatgctcatcatggtgacaacatggaagatcacatgcaggtg 5922147  T
Q  517 ttagtggagaaatctctcataaagataaccg 547  Q
    |||||||||||||||||||||||||||||||    
T  5922146 ttagtggagaaatctctcataaagataaccg 5922116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 449
Target Start/End: Complemental strand, 267213 - 267085
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||| | ||||||  ||||| |||| |||| | | || |||||||||| ||||| |||||||||||| ||| | ||||| ||| |     
T  267213 tacattagatgggtatgataagattcccaataaagagatccaaaagatacttaaagtgagctatgatggtttggaagaagaggagcagagtgtcttttta 267114  T
Q  421 gatattgcttgttgcttcaaaggatatga 449  Q
    || ||||||||||||||||||||||||||    
T  267113 gacattgcttgttgcttcaaaggatatga 267085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 443
Target Start/End: Complemental strand, 28126548 - 28126426
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||||| ||||||  |||||||||| |||  | |  | ||| | |||| |||||||||||| ||||| ||| ||||||| |||||     
T  28126548 tacattagatggatatgaaaagattccaaataaaaagatccaagagatatttaaactaagctatgatgctttggaggaagatgagcaaagtgtctttctc 28126449  T
Q  421 gatattgcttgttgcttcaaagg 443  Q
    ||||| ||||| |||||||||||    
T  28126448 gatatagcttgctgcttcaaagg 28126426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 443
Target Start/End: Original strand, 26137255 - 26137319
Alignment:
Q  379 agctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaagg 443  Q
    |||| |||||||||||| |||||| |  ||||||| ||| | |||||||||||||||||||||||    
T  26137255 agctatgatgctttggacgaagaacaacaaagtgtatttttggatattgcttgttgcttcaaagg 26137319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 440
Target Start/End: Complemental strand, 28132310 - 28132255
Alignment:
Q  385 gatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaa 440  Q
    ||||||||||| ||||| ||| ||||||| ||||| ||||| ||||||||||||||    
T  28132310 gatgctttggaggaagaggagcaaagtgtctttctggatatagcttgttgcttcaa 28132255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 4e-52; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 244 - 536
Target Start/End: Original strand, 29469444 - 29469736
Alignment:
Q  244 tatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaagga 343  Q
    |||||||||||||||||  ||||||| ||||| |||||||||||||| ||| |||| ||| | ||||||||||||| | |||||||||||||||||||||    
T  29469444 tatgcttctggccttccactggctttggaagtcataggttctcacttttttaataagacaattgaacaatgtaaatatgcattagatcgttatgaaagga 29469543  T
Q  344 ttcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaagg 443  Q
    |||||||||||||||| |||||| | ||| || | ||||||||||||||| | |||||||||||   |||||||||||| ||||| || |||||||||||    
T  29469544 ttcctgataaaaagatccaaacgatactacaacttagctttgatgctttgcaggaagaagagaagtctgtttttcttgacattgcctgctgcttcaaagg 29469643  T
Q  444 atatgatttgacattcgtcaataaaatgcttcatgctcatcatggtgacaacatggaagatcacatgcaggtgttagtggagaaatctctcat 536  Q
    |||| | | ||||   ||  |  |||| ||| |||||||| ||| | | | |||| ||||||||||  | ||||||||||| |||||||||||    
T  29469644 atataaatggacaagggtagaacaaatacttaatgctcattatgataatatcatgaaagatcacattgatgtgttagtggaaaaatctctcat 29469736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 244 - 544
Target Start/End: Complemental strand, 28479319 - 28479019
Alignment:
Q  244 tatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaagga 343  Q
    |||||||||||||||||  | ||||| ||||| |||||||||||||| ||| | || ||| ||||||||||||| | |  | ||||||||| |||||||     
T  28479319 tatgcttctggccttccacttgctttggaagtcataggttctcacttttttaacaagacaatagaacaatgtaattatgtactagatcgttgtgaaaggg 28479220  T
Q  344 ttcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaagg 443  Q
    |||||||||||||||| |||||    ||| |||||||||||||||||||| | || ||||| |||  |||||||||||| |||||||||||| |||||||    
T  28479219 ttcctgataaaaagatccaaacaacactacaagtgagctttgatgctttgcaggatgaagacaaatttgtttttcttgacattgcttgttgcctcaaagg 28479120  T
Q  444 atatgatttgacattcgtcaataaaatgcttcatgctcatcatggtgacaacatggaagatcacatgcaggtgttagtggagaaatctctcataaagata 543  Q
    ||   |||||| |   ||| |  |||| |||||||||||| ||||| | | |||| ||||||||||  | ||||||||||| |||||||||||||| |||    
T  28479119 atggaatttgataagagtcgaagaaatacttcatgctcattatggtaatatcatgaaagatcacattgatgtgttagtggaaaaatctctcataaaaata 28479020  T
Q  544 a 544  Q
    |    
T  28479019 a 28479019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 244 - 544
Target Start/End: Complemental strand, 29791774 - 29791474
Alignment:
Q  244 tatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaagga 343  Q
    |||||||||||||||||  | ||||| ||||| |||||||||||||| ||| | || ||| ||||||||||||| | |  | ||||||||| |||||||     
T  29791774 tatgcttctggccttccacttgctttggaagtcataggttctcacttttttaacaagacaatagaacaatgtaattatgtactagatcgttgtgaaaggg 29791675  T
Q  344 ttcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaagg 443  Q
    |||||||||||||||| |||||    ||| |||||||||||||||||||| | || ||||| |||  |||||||||||| |||||||||||| |||||||    
T  29791674 ttcctgataaaaagatccaaacaacactacaagtgagctttgatgctttgcaggatgaagacaaatttgtttttcttgacattgcttgttgcctcaaagg 29791575  T
Q  444 atatgatttgacattcgtcaataaaatgcttcatgctcatcatggtgacaacatggaagatcacatgcaggtgttagtggagaaatctctcataaagata 543  Q
    ||   |||||| |   ||| |  |||| |||||||||||| ||||| | | |||| ||||||||||  | ||||||||||| |||||||||||||| |||    
T  29791574 atggaatttgataagagtcgaagaaatacttcatgctcattatggtaatatcatgaaagatcacattgatgtgttagtggaaaaatctctcataaaaata 29791475  T
Q  544 a 544  Q
    |    
T  29791474 a 29791474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 244 - 539
Target Start/End: Complemental strand, 28490437 - 28490142
Alignment:
Q  244 tatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaagga 343  Q
    |||||||||||||||||  | ||||| ||||| |||||||||||||| ||| |||| ||| ||||  ||||||||| | || |||||||||||||||||     
T  28490437 tatgcttctggccttccactcgctttggaagtcataggttctcacttttttaataagacaatagaggaatgtaaatgtgcactagatcgttatgaaaggg 28490338  T
Q  344 ttcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaagg 443  Q
    |||||||||||||||| ||||||   ||  || |||||||| |||||||| |||||||||| ||   |||||||||||| ||||||||||||||||||||    
T  28490337 ttcctgataaaaagatccaaacgacactgcaactgagctttaatgctttgcaagaagaagaaaagtctgtttttcttgacattgcttgttgcttcaaagg 28490238  T
Q  444 atatgatttgacattcgtcaataaaatgcttcatgctcatcatggtgacaacatggaagatcacatgcaggtgttagtggagaaatctctcataaa 539  Q
    ||   | |||| |   ||| |  |||| |||||||| ||||||||||| | |||| ||||||||||  | |  |||||||| ||||||||||||||    
T  28490237 atggaaattgaaaagagtcgaagaaatacttcatgcccatcatggtgatatcatgaaagatcacattaatgcattagtggaaaaatctctcataaa 28490142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 244 - 539
Target Start/End: Complemental strand, 29802847 - 29802552
Alignment:
Q  244 tatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaagga 343  Q
    |||||||||||||||||  | ||||| ||||| |||||||||||||| ||| |||| ||| ||||  ||||||||| | || |||||||||||||||||     
T  29802847 tatgcttctggccttccactcgctttggaagtcataggttctcacttttttaataagacaatagaggaatgtaaatgtgcactagatcgttatgaaaggg 29802748  T
Q  344 ttcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaagg 443  Q
    |||||||||||||||| ||||||   ||  || |||||||| |||||||| |||||||||| ||   |||||||||||| ||||||||||||||||||||    
T  29802747 ttcctgataaaaagatccaaacgacactgcaactgagctttaatgctttgcaagaagaagaaaagtctgtttttcttgacattgcttgttgcttcaaagg 29802648  T
Q  444 atatgatttgacattcgtcaataaaatgcttcatgctcatcatggtgacaacatggaagatcacatgcaggtgttagtggagaaatctctcataaa 539  Q
    ||   | |||| |   ||| |  |||| |||||||| ||||||||||| | |||| ||||||||||  | |  |||||||| ||||||||||||||    
T  29802647 atggaaattgaaaagagtcgaagaaatacttcatgcccatcatggtgatatcatgaaagatcacattaatgcattagtggaaaaatctctcataaa 29802552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 244 - 544
Target Start/End: Complemental strand, 29695336 - 29695036
Alignment:
Q  244 tatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaagga 343  Q
    |||||||||||||||||  | ||||| ||||| |||||||||||||| ||| | || ||| |||||||||||||   |  | ||||||||| |||||||     
T  29695336 tatgcttctggccttccacttgctttggaagtcataggttctcacttttttaacaagacaatagaacaatgtaatcatgtactagatcgttgtgaaaggg 29695237  T
Q  344 ttcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaagg 443  Q
    |||||||||||||||| |||||    ||| |||||||||||||||||||| | || ||||| |||  |||||||||||| |||||||||||| |||||||    
T  29695236 ttcctgataaaaagatccaaacaacactacaagtgagctttgatgctttgcaggatgaagacaaatttgtttttcttgacattgcttgttgcctcaaagg 29695137  T
Q  444 atatgatttgacattcgtcaataaaatgcttcatgctcatcatggtgacaacatggaagatcacatgcaggtgttagtggagaaatctctcataaagata 543  Q
    ||   ||||||||   ||  |  |||| |||||||||||| ||||| | | |||| ||||||||||  | ||||||||||| |||||||||||||| |||    
T  29695136 atggaatttgacaagagtagaagaaatacttcatgctcattatggtaatatcatgaaagatcacattgatgtgttagtggaaaaatctctcataaaaata 29695037  T
Q  544 a 544  Q
    |    
T  29695036 a 29695036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 265 - 539
Target Start/End: Complemental strand, 29727879 - 29727605
Alignment:
Q  265 gctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaaggattcctgataaaaagatgcaaa 364  Q
    ||||| ||||| || ||||||||||| | | |||| ||| ||||||||||||||  | || |||||||||| ||||  |||||| |||||||||| ||||    
T  29727879 gctttggaagtcatgggttctcacttttctaataagacaatagaacaatgtaaagatgcactagatcgttacgaaaaaattcctcataaaaagatccaaa 29727780  T
Q  365 cgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaaggatatgatttgacattcgtcaa 464  Q
     |   ||| ||||||||||||||||| |||| || ||||||||   |||||||||||| ||||||||||||||||||||||   | || |||   ||| |    
T  29727779 tgacactacaagtgagctttgatgctctggaggacgaagagaagtttgtttttcttgacattgcttgttgcttcaaaggatggaaattaacaagggtcga 29727680  T
Q  465 taaaatgcttcatgctcatcatggtgacaacatggaagatcacatgcaggtgttagtggagaaatctctcataaa 539  Q
      |||| ||||||| |||||||||||| |||||| ||||||||||  | ||||||||||| ||||||||||||||    
T  29727679 agaaatacttcatgttcatcatggtgataacatgaaagatcacattaatgtgttagtggaaaaatctctcataaa 29727605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 244 - 544
Target Start/End: Complemental strand, 29759396 - 29759096
Alignment:
Q  244 tatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaagga 343  Q
    ||||||||||| | |||  | ||||||||||| || ||||||||||| | | |||| ||| ||||||||||||||  | || |||||||||||||||       
T  29759396 tatgcttctggtcatccacttgctttagaagtcatgggttctcacttttctaataagacaatagaacaatgtaaagatgcactagatcgttatgaaaaag 29759297  T
Q  344 ttcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaagg 443  Q
    ||||| |||||||||| |||||    ||| || | |||||||||||||||||||| ||||||||   |||||||||||| |||||||||||||| |||||    
T  29759296 ttcctcataaaaagatccaaacaacactacaaattagctttgatgctttggaagacgaagagaagtttgtttttcttgacattgcttgttgctttaaagg 29759197  T
Q  444 atatgatttgacattcgtcaataaaatgcttcatgctcatcatggtgacaacatggaagatcacatgcaggtgttagtggagaaatctctcataaagata 543  Q
    ||   | || |||   ||| || |||| |||||||| ||||||||||| | | || ||||||||||  | ||||||||||| |||||||||||||| |||    
T  29759196 atgcaaattaacaagggtcgatgaaatacttcatgcccatcatggtgaaatcgtgaaagatcacattaatgtgttagtggaaaaatctctcataaaaata 29759097  T
Q  544 a 544  Q
    |    
T  29759096 a 29759096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 241 - 454
Target Start/End: Original strand, 28326707 - 28326920
Alignment:
Q  241 acttatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaa 340  Q
    |||||||||||||||||||| ||||||||||||||| | |||||  |||| |||   || |   ||| | ||||||||||| ||||| |||  |||||||    
T  28326707 acttatgcttctggccttccattggctttagaagtagtgggttccaacttgtttggaaagaatatagtagaatgtaaatctgcattatatcagtatgaaa 28326806  T
Q  341 ggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaa 440  Q
    |||||||   ||||||||| ||| || | || ||||| ||||||||||||||||| ||||| ||| | | ||||||||| || |||||||| ||||||||    
T  28326807 ggattcccattaaaaagatccaagcgatacttaaagtaagctttgatgctttggatgaagatgagcagaatgtttttctcgacattgcttgctgcttcaa 28326906  T
Q  441 aggatatgatttga 454  Q
     |||||||| ||||    
T  28326907 tggatatgaattga 28326920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 241 - 454
Target Start/End: Original strand, 28504343 - 28504556
Alignment:
Q  241 acttatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaa 340  Q
    |||||||||||||||||||| ||||||||||||||| | |||||  |||| |||   || |   ||| | ||||||||||| ||||| |||  |||||||    
T  28504343 acttatgcttctggccttccattggctttagaagtagtgggttccaacttgtttggaaagaatatagtagaatgtaaatctgcattatatcagtatgaaa 28504442  T
Q  341 ggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaa 440  Q
    |||||||   ||||||||| ||| || | || ||||| ||||||||||||||||| ||||| ||| | | ||||||||| || |||||||| ||||||||    
T  28504443 ggattcccattaaaaagatccaagcgatacttaaagtaagctttgatgctttggatgaagatgagcagaatgtttttctcgacattgcttgctgcttcaa 28504542  T
Q  441 aggatatgatttga 454  Q
     |||||||| ||||    
T  28504543 tggatatgaattga 28504556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 241 - 454
Target Start/End: Original strand, 28186623 - 28186836
Alignment:
Q  241 acttatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaa 340  Q
    |||||||||||||||||||| ||||||||||||||| | |||||  |||| |||   || |   ||| | |||| |||||| ||||| |||  |||||||    
T  28186623 acttatgcttctggccttccattggctttagaagtagtgggttccaacttgtttggaaagaatataggagaatggaaatctgcattaaatcagtatgaaa 28186722  T
Q  341 ggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaa 440  Q
    ||||||| ||||||||||| |||  | | || ||||| ||||||||||||||||  |||| |||  ||| ||||||||| || || ||||| ||||||||    
T  28186723 ggattcccgataaaaagatccaagagatactcaaagtaagctttgatgctttgggggaagcagaacaaaatgtttttctcgacatcgcttgctgcttcaa 28186822  T
Q  441 aggatatgatttga 454  Q
    ||||||||| ||||    
T  28186823 aggatatgaattga 28186836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 305 - 453
Target Start/End: Complemental strand, 29842881 - 29842733
Alignment:
Q  305 tagaacaatgtaaatctacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaaga 404  Q
    ||||| |||| ||||||||||||||| | ||||||||||||||| ||||| |||| || |   | || ||| | ||||||||||||||||| ||||| ||    
T  29842881 tagaagaatggaaatctacattagataggtatgaaaggattcctaataaagagatccacaatatacttaaaataagctttgatgctttggaggaagacga 29842782  T
Q  405 gaaaagtgtttttcttgatattgcttgttgcttcaaaggatatgatttg 453  Q
      || |||||||||| || |||||||||||||||||||| |||||||||    
T  29842781 acaaggtgtttttctcgacattgcttgttgcttcaaagggtatgatttg 29842733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 447
Target Start/End: Complemental strand, 27609993 - 27609867
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||| ||||||||  ||||| |||| |||| | | || |||||||||| |||| ||||||||||||| ||| ||||||| |||||     
T  27609993 tacattagatgggtatgacaggattcccaataaagagatccaaaagatacttaaagtgagctatgattctttggaagaagaggagcaaagtgtctttctg 27609894  T
Q  421 gatattgcttgttgcttcaaaggatat 447  Q
    || ||||||||||||||||||||||||    
T  27609893 gacattgcttgttgcttcaaaggatat 27609867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 241 - 454
Target Start/End: Original strand, 28244024 - 28244237
Alignment:
Q  241 acttatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaa 340  Q
    |||||||||||||||||||| ||||||||||||||| | |||||  ||||||||   || |   ||| | |||| |||||| |||||||||| |||  ||    
T  28244024 acttatgcttctggccttccattggctttagaagtagtgggttcaaacttatttggaaataatataggagaatggaaatctgcattagatcggtatagaa 28244123  T
Q  341 ggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaa 440  Q
    |||||||   ||||||||| ||   | | || ||||| |||||||||||||||||  |||| ||| | | ||||||||| || |||||||| ||||||||    
T  28244124 ggattccgattaaaaagatacaggagatacttaaagtaagctttgatgctttggagaaagatgagcagaatgtttttctcgacattgcttgctgcttcaa 28244223  T
Q  441 aggatatgatttga 454  Q
    ||||||| ||||||    
T  28244224 aggatataatttga 28244237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 244 - 443
Target Start/End: Complemental strand, 27705204 - 27705005
Alignment:
Q  244 tatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataa-aacagtagaacaatgtaaatctacattagatcgttatgaaagg 342  Q
    ||||||||||||||||| || | |||||||||||| |||||| |||| |||   || |||| ||||| |||| ||   |||||||||| | ||||| |||    
T  27705204 tatgcttctggccttccgttagttttagaagtaatgggttctaacttgtttggcaagaaca-tagaagaatggaagaatacattagatgggtatgacagg 27705106  T
Q  343 attcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaag 442  Q
    |||||  ||||| |||| |||| | | || | |||||||| |||||||||||||||||| ||| | ||||| |||||||| |||||||||||||| ||||    
T  27705105 attcccaataaagagatccaaaagatacttagagtgagctatgatgctttggaagaagaggagcagagtgtctttcttgacattgcttgttgcttaaaag 27705006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 305 - 453
Target Start/End: Original strand, 29827279 - 29827427
Alignment:
Q  305 tagaacaatgtaaatctacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaaga 404  Q
    ||||| |||| ||||||| ||||||| | ||||||||||||||| ||||| |||| ||||   | || ||| | || |||||||||||||| ||||| ||    
T  29827279 tagaagaatggaaatctatattagatagatatgaaaggattcctaataaagagatccaaaatatacttaaaataagttttgatgctttggaggaagatga 29827378  T
Q  405 gaaaagtgtttttcttgatattgcttgttgcttcaaaggatatgatttg 453  Q
      || |||||||||| || |||||||||||||||||||| |||||||||    
T  29827379 acaaggtgtttttctcgacattgcttgttgcttcaaagggtatgatttg 29827427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 373 - 454
Target Start/End: Complemental strand, 28296561 - 28296480
Alignment:
Q  373 aaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaaggatatgatttga 454  Q
    ||||| ||||||||||||||||| ||||| ||||||| |||||||||||| || ||||| ||||||||||||||||| ||||    
T  28296561 aaagtaagctttgatgctttggaggaagatgagaaaaatgtttttcttgacatcgcttgctgcttcaaaggatatgaattga 28296480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 373 - 454
Target Start/End: Original strand, 28515512 - 28515593
Alignment:
Q  373 aaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaaggatatgatttga 454  Q
    ||||| ||||||||||||||||| ||||| ||||||| |||||||||||| || ||||| ||||||||||||||||| ||||    
T  28515512 aaagtaagctttgatgctttggaggaagatgagaaaaatgtttttcttgacatcgcttgctgcttcaaaggatatgaattga 28515593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 321 - 445
Target Start/End: Original strand, 26624580 - 26624704
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||| ||||||||  ||||| |||| |||| | | || |||||||||| |||||||||||||||||| ||| | ||||| |||||     
T  26624580 tacattagatgggtatgacaggattcccaataaagagatccaaaagatacttaaagtgagctatgatgctttggaagaagaggagcagagtgtctttcta 26624679  T
Q  421 gatattgcttgttgcttcaaaggat 445  Q
    ||||||||||||||||  |||||||    
T  26624680 gatattgcttgttgctcgaaaggat 26624704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 321 - 445
Target Start/End: Original strand, 26730557 - 26730681
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||| ||||||||  ||||| |||| |||| | | || |||||||||| |||||||||||||||||| ||| | ||||| |||||     
T  26730557 tacattagatgggtatgacaggattcccaataaagagatccaaaagatacttaaagtgagctatgatgctttggaagaagaggagcagagtgtctttcta 26730656  T
Q  421 gatattgcttgttgcttcaaaggat 445  Q
    ||||||||||||||||  |||||||    
T  26730657 gatattgcttgttgctcgaaaggat 26730681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 324 - 444
Target Start/End: Complemental strand, 27697456 - 27697336
Alignment:
Q  324 attagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgat 423  Q
    ||||||| | ||||| ||||||||  ||||| |||| |||| | | || | |||||||| |||||||||||||||||| ||| ||||||| ||||| ||     
T  27697456 attagatgggtatgacaggattcccaataaagagatccaaaagatacttagagtgagctatgatgctttggaagaagaggagcaaagtgtctttctggac 27697357  T
Q  424 attgcttgttgcttcaaagga 444  Q
    |||||||||||||||||||||    
T  27697356 attgcttgttgcttcaaagga 27697336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 316 - 447
Target Start/End: Original strand, 28140839 - 28140970
Alignment:
Q  316 aaatctacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgttt 415  Q
    ||||||||||||||||| ||||||||||||||| ||||| || | |  | | | || |||||||||||||||  ||||||  |||| ||| |||||||||    
T  28140839 aaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgttt 28140938  T
Q  416 ttcttgatattgcttgttgcttcaaaggatat 447  Q
    |||| || ||||||||||| |||| |||||||    
T  28140939 ttctcgacattgcttgttgtttcagaggatat 28140970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 447
Target Start/End: Original strand, 27680259 - 27680385
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||| ||||||||  ||||| |||| |||| | | || || ||||||| |||||||||||||||||| ||| | ||||| ||||||    
T  27680259 tacattagatgggtatgacaggattcccaataaagagatccaaaagatacttaaggtgagctatgatgctttggaagaagaggagcagagtgtctttctt 27680358  T
Q  421 gatattgcttgttgcttcaaaggatat 447  Q
    || || ||||| |||||||||||||||    
T  27680359 gacatcgcttgctgcttcaaaggatat 27680385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 26862890 - 26863011
Alignment:
Q  322 acattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttg 421  Q
    ||||||||| | ||||||| ||||||  ||||| |||| |||| | | || ||||| |||| ||||||||||||||||||  || ||||||| ||||| |    
T  26862890 acattagatgggtatgaaaagattcccaataaagagatccaaaggatacttaaagtaagctatgatgctttggaagaagagcagcaaagtgtctttctag 26862989  T
Q  422 atattgcttgttgcttcaaagg 443  Q
    ||||||||||||| ||||||||    
T  26862990 atattgcttgttgtttcaaagg 26863011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 445
Target Start/End: Original strand, 31285868 - 31285992
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||| | ||||||  ||||| |||| |||| | | || ||||| |||| |||||||||||||||||| ||| | ||||| |||||     
T  31285868 tacattagatgggtatgacaagattcccaataaagagatccaaaagatacttaaagtaagctatgatgctttggaagaagaggagcagagtgtctttctg 31285967  T
Q  421 gatattgcttgttgcttcaaaggat 445  Q
    || ||||||||||||||||||||||    
T  31285968 gacattgcttgttgcttcaaaggat 31285992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 323 - 442
Target Start/End: Original strand, 26825130 - 26825249
Alignment:
Q  323 cattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttga 422  Q
    |||||||| | ||||||||||||||||| |||||||| |||  | | || | ||| |||| ||||||||||||||||||  |  |||||||||| || ||    
T  26825130 cattagatggatatgaaaggattcctgacaaaaagatccaagagatacttagagtaagctatgatgctttggaagaagagcaacaaagtgttttcctcga 26825229  T
Q  423 tattgcttgttgcttcaaag 442  Q
     |||||||||||||||||||    
T  26825230 cattgcttgttgcttcaaag 26825249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 321 - 443
Target Start/End: Complemental strand, 27426485 - 27426363
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||||| ||||||  ||||| |||| ||||   | || |||||||||| |||| ||||||| ||||| ||| ||||||| |||||     
T  27426485 tacattagattggtatgaaaagattcccaataaagagatccaaagaatacttaaagtgagctatgattctttggaggaagaggagcaaagtgtctttcta 27426386  T
Q  421 gatattgcttgttgcttcaaagg 443  Q
    || ||||||||||||||||||||    
T  27426385 gacattgcttgttgcttcaaagg 27426363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 443
Target Start/End: Complemental strand, 28097261 - 28097194
Alignment:
Q  376 gtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaagg 443  Q
    ||||| |||||||||||||| ||||| ||||  ||||||||||| || ||||||||||||||||||||    
T  28097261 gtgagttttgatgctttggaggaagatgagaggagtgtttttctcgacattgcttgttgcttcaaagg 28097194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 29469141 - 29469244
Alignment:
Q  34 attgctggaggaaatgattggtatggtctcggcagtagagtcatcatcacaacccgggacaaagggttgctattgtctcacggggttgaaagtacgtatg 133  Q
    ||||||||| ||  |||||||| |||||  |||||||||||||||||||| || ||||||||| ||||||||   | ||| ||||||||| |||| ||||    
T  29469141 attgctggaagatctgattggtttggtcgtggcagtagagtcatcatcaccactcgggacaaaaggttgctaacatatcatggggttgaacgtacatatg 29469240  T
Q  134 aggt 137  Q
    ||||    
T  29469241 aggt 29469244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 321 - 443
Target Start/End: Original strand, 26885376 - 26885498
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||| ||||| | ||||||| ||||||| ||| |||||| |||  | | || ||||| |||| ||||||||| || ||||| ||| ||||||| |||||     
T  26885376 tacactagatggatatgaaaagattcctaatacaaagatccaagagatacttaaagtaagctatgatgctttagaggaagaggagcaaagtgtctttctg 26885475  T
Q  421 gatattgcttgttgcttcaaagg 443  Q
    ||||| |||||||||||||||||    
T  26885476 gatatagcttgttgcttcaaagg 26885498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 373 - 443
Target Start/End: Complemental strand, 27530125 - 27530055
Alignment:
Q  373 aaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaagg 443  Q
    |||||||||| |||| |||||||  |||||||| ||||||| ||||| || ||||||||||||||||||||    
T  27530125 aaagtgagctatgattctttggagaaagaagagcaaagtgtctttctagacattgcttgttgcttcaaagg 27530055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 373 - 451
Target Start/End: Complemental strand, 27664035 - 27663957
Alignment:
Q  373 aaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaaggatatgatt 451  Q
    ||||| ||||||||| |||||||||||||| |  | ||||| ||| | ||||||||||||||||||||||||| |||||    
T  27664035 aaagtaagctttgatactttggaagaagaacaacagagtgtctttttggatattgcttgttgcttcaaaggatgtgatt 27663957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 445
Target Start/End: Original strand, 26647788 - 26647912
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||||| ||||||  |||||||||| ||   | | || ||||| |||| |||||||||||| |||||  || | ||||| |||||     
T  26647788 tacattagatggatatgaaaagattcccaataaaaagatccacgagatacttaaagtaagctatgatgctttggaggaagagcagcagagtgtctttcta 26647887  T
Q  421 gatattgcttgttgcttcaaaggat 445  Q
    || ||||||||||||||||||||||    
T  26647888 gacattgcttgttgcttcaaaggat 26647912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 445
Target Start/End: Original strand, 26753756 - 26753880
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||||| ||||||  |||||||||| ||   | | || ||||| |||| |||||||||||| |||||  || | ||||| |||||     
T  26753756 tacattagatggatatgaaaagattcccaataaaaagatccacgagatacttaaagtaagctatgatgctttggaggaagagcagcagagtgtctttcta 26753855  T
Q  421 gatattgcttgttgcttcaaaggat 445  Q
    || ||||||||||||||||||||||    
T  26753856 gacattgcttgttgcttcaaaggat 26753880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 445
Target Start/End: Original strand, 26803755 - 26803879
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||||| ||||||  |||||||||| ||   | | || ||||| |||| |||||||||||| |||||  || | ||||| |||||     
T  26803755 tacattagatggatatgaaaagattcccaataaaaagatccacgagatacttaaagtaagctatgatgctttggaggaagagcagcagagtgtctttcta 26803854  T
Q  421 gatattgcttgttgcttcaaaggat 445  Q
    || ||||||||||||||||||||||    
T  26803855 gacattgcttgttgcttcaaaggat 26803879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 441
Target Start/End: Complemental strand, 27717372 - 27717252
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||| ||||||||  ||||| |||| |||| | | || ||||| || | |||||||||||| |||||  || ||||||| |||||     
T  27717372 tacattagatgggtatgacaggattcccaataaagagatccaaaagatacttaaagtaagttatgatgctttggaggaagagcagcaaagtgtctttcta 27717273  T
Q  421 gatattgcttgttgcttcaaa 441  Q
    || ||||||||||||||||||    
T  27717272 gacattgcttgttgcttcaaa 27717252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 445
Target Start/End: Complemental strand, 27591836 - 27591770
Alignment:
Q  379 agctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaaggat 445  Q
    |||| |||||||||||||||||| ||| | ||||| ||| | ||||||||||||||| |||||||||    
T  27591836 agctatgatgctttggaagaagaggagcagagtgtctttttggatattgcttgttgcatcaaaggat 27591770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 334 - 443
Target Start/End: Original strand, 27215774 - 27215883
Alignment:
Q  334 tatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgtt 433  Q
    ||||||| ||||||  ||||| |||| |||| | | || ||||| |||| ||||||| |||| ||| | ||||| ||||| ||||| || ||||||||||    
T  27215774 tatgaaaagattcccaataaagagatccaaaggatacttaaagtcagctatgatgctctggaggaaaaggagaagagtgtctttctagacattgcttgtt 27215873  T
Q  434 gcttcaaagg 443  Q
    ||||||||||    
T  27215874 gcttcaaagg 27215883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 244 - 445
Target Start/End: Complemental strand, 29673959 - 29673758
Alignment:
Q  244 tatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaagga 343  Q
    ||||||||||| | |||  | ||||| ||||| || ||||||||||| | | |||| ||| ||||||| |||||   | || ||||||||||  ||||      
T  29673959 tatgcttctggtcatccacttgctttggaagtcatcggttctcacttttctaataagacaatagaacagtgtaatgatgcactagatcgttacaaaagag 29673860  T
Q  344 ttcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaagg 443  Q
    ||||| |||| | ||| ||||||   ||| || |||| | |||| ||||| | ||||||||||| | ||| |||||||| ||||| ||||||||||||||    
T  29673859 ttcctcataacatgatccaaacgacactacaactgagttatgattctttgcaggaagaagagaagattgtgtttcttgacattgcatgttgcttcaaagg 29673760  T
Q  444 at 445  Q
    ||    
T  29673759 at 29673758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 445
Target Start/End: Complemental strand, 27603525 - 27603453
Alignment:
Q  373 aaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaaggat 445  Q
    ||||| |||| |||||||||||| |||||  || | ||||| ||||| || ||||||||||||||||||||||    
T  27603525 aaagtaagctatgatgctttggaggaagagcagcagagtgtctttctagacattgcttgttgcttcaaaggat 27603453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 445
Target Start/End: Complemental strand, 27676437 - 27676369
Alignment:
Q  377 tgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaaggat 445  Q
    |||||| |||||||||||| ||||| ||| | ||||| ||| | ||||||||||||||| |||||||||    
T  27676437 tgagctatgatgctttggacgaagaggagcagagtgtctttttggatattgcttgttgcatcaaaggat 27676369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 28479610 - 28479554
Alignment:
Q  49 gattggtatggtctcggcagtagagtcatcatcacaacccgggacaaagggttgcta 105  Q
    ||||||| |||||| || ||||||||||||||||| || ||||||||| ||||||||    
T  28479610 gattggtttggtctaggaagtagagtcatcatcacgactcgggacaaaaggttgcta 28479554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 445
Target Start/End: Original strand, 28787599 - 28787671
Alignment:
Q  373 aaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaaggat 445  Q
    ||||| |||| |||||||||||| |||||  |  ||||||||||||| || ||||| ||||||||||||||||    
T  28787599 aaagtaagctatgatgctttggaggaagagcaacaaagtgtttttctagacattgcatgttgcttcaaaggat 28787671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 445
Target Start/End: Original strand, 28793720 - 28793792
Alignment:
Q  373 aaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaaggat 445  Q
    ||||| |||| |||||||||||| |||||  |  ||||||||||||| || ||||| ||||||||||||||||    
T  28793720 aaagtaagctatgatgctttggaggaagagcaacaaagtgtttttctagacattgcatgttgcttcaaaggat 28793792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 29792065 - 29792009
Alignment:
Q  49 gattggtatggtctcggcagtagagtcatcatcacaacccgggacaaagggttgcta 105  Q
    ||||||| |||||| || ||||||||||||||||| || ||||||||| ||||||||    
T  29792065 gattggtttggtctaggaagtagagtcatcatcacgactcgggacaaaaggttgcta 29792009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 28240723 - 28240778
Alignment:
Q  382 tttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgctt 437  Q
    ||||||||||||||  |||| ||| ||||||||||||| || ||||||||||||||    
T  28240723 tttgatgctttggagaaagatgagcaaagtgtttttctcgacattgcttgttgctt 28240778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 28296693 - 28296650
Alignment:
Q  241 acttatgcttctggccttcctttggctttagaagtaataggttc 284  Q
    |||||||||||||||||||| ||||||||||||||| | |||||    
T  28296693 acttatgcttctggccttccattggctttagaagtagtgggttc 28296650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 276
Target Start/End: Original strand, 28515380 - 28515415
Alignment:
Q  241 acttatgcttctggccttcctttggctttagaagta 276  Q
    |||||||||||||||||||| |||||||||||||||    
T  28515380 acttatgcttctggccttccattggctttagaagta 28515415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 544
Target Start/End: Original strand, 28901966 - 28902137
Alignment:
Q  373 aaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaaggatatgatttgacattcgtcaataaaatgc 472  Q
    ||||||||||| |||| |||||   |||||||||||  |||||||||||| || |||||||  ||||||||| |  | |||  |   ||| | | ||| |    
T  28901966 aaagtgagcttcgatgatttggtccaagaagagaaagatgtttttcttgacatagcttgttttttcaaaggagaacaattggaagatgtcgaaataatac 28902065  T
Q  473 ttcatgctcatcatggtgacaacatggaagatcacatgcaggtgttagtggagaaatctctcataaagataa 544  Q
    ||||||||||| |||||||| | | | ||||||||||  | |||||| | || |||||||||||||||||||    
T  28902066 ttcatgctcattatggtgacgaaaagaaagatcacatcaatgtgttaattgaaaaatctctcataaagataa 28902137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 29523302 - 29523345
Alignment:
Q  413 tttttcttgatattgcttgttgcttcaaaggatatgatttgaca 456  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||    
T  29523302 tttttctcgatattgtttgttgcttcaaaggatatgagttgaca 29523345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 443
Target Start/End: Original strand, 26812889 - 26812959
Alignment:
Q  373 aaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaagg 443  Q
    ||||| |||||||||||||||||  ||||||| || ||||||||| | |||||||  |||||||| |||||    
T  26812889 aaagtaagctttgatgctttggacaaagaagaaaagagtgtttttttggatattgtatgttgctttaaagg 26812959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 443
Target Start/End: Original strand, 25581084 - 25581153
Alignment:
Q  374 aagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaagg 443  Q
    |||| |||| |||||||||||||  | | ||||| ||||| ||||| || ||||||||||||||||||||    
T  25581084 aagttagctatgatgctttggaaccaaaggagaagagtgtctttctagacattgcttgttgcttcaaagg 25581153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 28140764 - 28140808
Alignment:
Q  241 acttatgcttctggccttcctttggctttagaagtaataggttct 285  Q
    |||||||| ||||||||||| ||||||||||||||| | ||||||    
T  28140764 acttatgcctctggccttccattggctttagaagtagttggttct 28140808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 413 - 449
Target Start/End: Original strand, 29473835 - 29473871
Alignment:
Q  413 tttttcttgatattgcttgttgcttcaaaggatatga 449  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  29473835 tttttctggatattgtttgttgcttcaaaggatatga 29473871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 9e-50; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 244 - 544
Target Start/End: Original strand, 12589973 - 12590273
Alignment:
Q  244 tatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaagga 343  Q
    |||||||||||||||||  | ||||| ||||| |||||||||||||| ||| |||| |||||||| |||||| ||| | || ||||||||||||||||      
T  12589973 tatgcttctggccttccactagctttggaagtcataggttctcacttttttaataagacagtagagcaatgtgaatgtgcactagatcgttatgaaagag 12590072  T
Q  344 ttcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaagg 443  Q
    ||||| |||||||||| |||||    ||| || ||||||||||||||||| | |||||||||||   |||||||||||||||||||||||||||||||||    
T  12590073 ttcctcataaaaagatccaaacaacactacaactgagctttgatgctttgcaggaagaagagaagtctgtttttcttgatattgcttgttgcttcaaagg 12590172  T
Q  444 atatgatttgacattcgtcaataaaatgcttcatgctcatcatggtgacaacatggaagatcacatgcaggtgttagtggagaaatctctcataaagata 543  Q
    ||   | ||||||   ||| |  |||| |||||||||||||||||||| | |||| | ||||||||  | |||||||  || |||||||||||||| |||    
T  12590173 atggaaattgacaagggtcgaagaaatacttcatgctcatcatggtgatatcatgaatgatcacattaatgtgttagcagaaaaatctctcataaaaata 12590272  T
Q  544 a 544  Q
    |    
T  12590273 a 12590273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 433
Target Start/End: Original strand, 35984531 - 35984720
Alignment:
Q  244 tatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaagga 343  Q
    ||||||||||| ||||| ||||||||   ||||||||||||  | ||||||   || |||||| || | ||  ||||| ||||| | || |||||||  |    
T  35984531 tatgcttctggacttccattggctttgatagtaataggttccaatttatttggaaagacagtacaagagtgggaatctgcattacaccggtatgaaacca 35984630  T
Q  344 ttcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgtt 433  Q
    ||||| ||||| | || |||| | | || ||||| || ||||||||||| || ||||| ||| |||||||||||||||| ||||||||||    
T  35984631 ttcctaataaagacatccaaaagatacttaaagtaagttttgatgctttagaggaagatgagcaaagtgtttttcttgacattgcttgtt 35984720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 432
Target Start/End: Original strand, 31906415 - 31906474
Alignment:
Q  373 aaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgt 432  Q
    ||||| || |||||||||||||| ||||| |||||||||||||||||||| || ||||||    
T  31906415 aaagtaagttttgatgctttggaggaagatgagaaaagtgtttttcttgacatggcttgt 31906474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 443
Target Start/End: Complemental strand, 29272648 - 29272589
Alignment:
Q  384 tgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaagg 443  Q
    ||||||||||||||||||  |  ||||||| ||||| || ||||||||||||||||||||    
T  29272648 tgatgctttggaagaagagcaacaaagtgtctttctggacattgcttgttgcttcaaagg 29272589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 305 - 544
Target Start/End: Complemental strand, 238754 - 238515
Alignment:
Q  305 tagaacaatgtaaatctacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaaga 404  Q
    ||||||||||||||  | || ||||||||| |||||   ||||| |||||||||| |||| |   ||| || | |||| |||||||||  | ||||||||    
T  238754 tagaacaatgtaaagatgcactagatcgttttgaaaaagttcctcataaaaagatccaaatgacactacaactaagctatgatgctttacaggaagaaga 238655  T
Q  405 gaaaagtgtttttcttgatattgcttgttgcttcaaaggatatgatttgacattcgtcaataaaatgcttcatgctcatcatggtgacaacatggaagat 504  Q
    ||||| |||||||||||| ||||| |||||||||||||||||| | ||||||   ||| |  |||| ||| |||||||||||||||||| |||| |||||    
T  238654 gaaaattgtttttcttgacattgcatgttgcttcaaaggatataaattgacaagggtcgaacaaattctttatgctcatcatggtgacatcatgaaagat 238555  T
Q  505 cacatgcaggtgttagtggagaaatctctcataaagataa 544  Q
    |||||  | ||||||||||| ||||||||| |||| ||||    
T  238554 cacattaatgtgttagtggaaaaatctctcctaaaaataa 238515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 244 - 544
Target Start/End: Complemental strand, 212071 - 211771
Alignment:
Q  244 tatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaagga 343  Q
    ||||||||||| | |||  | ||||| || || || ||||||||||| | | |||| ||| ||||||||||||||  | || |||||| ||||||||       
T  212071 tatgcttctggtcatccacttgctttggaggtcatgggttctcacttttataataagacaatagaacaatgtaaagttgcactagatcattatgaaaaag 211972  T
Q  344 ttcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaagg 443  Q
    ||||| |||||||||| ||||||   ||| || ||||||||||||||||||| ||  |||| |||  |||||||||||| ||||||||||||||||||||    
T  211971 ttcctcataaaaagatccaaacgacactacaactgagctttgatgctttggaggacaaagataaatttgtttttcttgacattgcttgttgcttcaaagg 211872  T
Q  444 atatgatttgacattcgtcaataaaatgcttcatgctcatcatggtgacaacatggaagatcacatgcaggtgttagtggagaaatctctcataaagata 543  Q
    ||   | || |||   ||| |  |||| |||||||||||  | ||| | | |||| ||||| ||||  | ||||||||||| ||||||||||||||||||    
T  211871 atggaaattaacaagggtcgaagaaatacttcatgctcagtacggtaatatcatgaaagataacattaatgtgttagtggaaaaatctctcataaagata 211772  T
Q  544 a 544  Q
    |    
T  211771 a 211771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 244 - 544
Target Start/End: Original strand, 615028 - 615328
Alignment:
Q  244 tatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaagga 343  Q
    ||||||||||| | |||  | ||||| ||||| || |||||||| || | | |||| ||| ||||||||||| ||  | |||||||||||||||||||      
T  615028 tatgcttctggtcatccacttgctttggaagtcatgggttctcatttttctaataagacaatagaacaatgtgaagatgcattagatcgttatgaaagag 615127  T
Q  344 ttcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaagg 443  Q
    ||||| |||| ||||| |||| |   ||| |  ||||||||||||| ||| |  ||||||| ||   |||||||||||| ||||||||||||||||||||    
T  615128 ttcctcataacaagatccaaatgacactacagctgagctttgatgccttgcagaaagaagaaaagtttgtttttcttgacattgcttgttgcttcaaagg 615227  T
Q  444 atatgatttgacattcgtcaataaaatgcttcatgctcatcatggtgacaacatggaagatcacatgcaggtgttagtggagaaatctctcataaagata 543  Q
    ||   | ||||||   ||  |  |||| |||||||||||| ||||||| | |||| ||||||||||  | ||||| ||||| |||||||||||||| |||    
T  615228 atggaaattgacaagggttgaagaaatacttcatgctcattatggtgatatcatgaaagatcacattaatgtgttggtggaaaaatctctcataaaaata 615327  T
Q  544 a 544  Q
    |    
T  615328 a 615328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 614737 - 614793
Alignment:
Q  49 gattggtatggtctcggcagtagagtcatcatcacaacccgggacaaagggttgcta 105  Q
    ||||||| |||||  |||||||||||||||||||| || ||||||||| ||||||||    
T  614737 gattggtttggtccaggcagtagagtcatcatcacgactcgggacaaaaggttgcta 614793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 241 - 455
Target Start/End: Original strand, 16692096 - 16692310
Alignment:
Q  241 acttatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaa 340  Q
    |||||||||||||||||||| || |||||||||||| |||| ||| |||| |||   || |   ||||| |||| ||||||||||| ||||| ||||||     
T  16692096 acttatgcttctggccttccattagctttagaagtagtaggatctaacttgtttggaaagaatatagaagaatggaaatctacatttgatcgatatgaat 16692195  T
Q  341 ggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaa 440  Q
    ||||||||| ||||   || || |   | || ||||| || ||||||  |||||| ||||| || || ||||||||| | || |||||||||||||||||    
T  16692196 ggattcctggtaaacgaattcacaaaatacttaaagtaagttttgatagtttggaggaagatgaaaagagtgtttttttggacattgcttgttgcttcaa 16692295  T
Q  441 aggatatgatttgac 455  Q
    |||||||||||||||    
T  16692296 aggatatgatttgac 16692310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 13717563 - 13717635
Alignment:
Q  377 tgagctttgatgctttggaagaagaagagaa--aagtgtttttcttgatattgcttgttgcttcaaaggatat 447  Q
    ||||||| ||||||||  | |||||||||||  | || |||||||||| ||||||||||||||||||||||||    
T  13717563 tgagcttcgatgctttacaggaagaagagaagtatgtttttttcttgacattgcttgttgcttcaaaggatat 13717635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 241 - 454
Target Start/End: Original strand, 44186 - 44399
Alignment:
Q  241 acttatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaa 340  Q
    |||||||||||||||||||| ||||||||||||||| | |||||  ||||||||   || |   ||| | |||| |||||| |||||||||| |||  ||    
T  44186 acttatgcttctggccttccattggctttagaagtagtgggttcaaacttatttggaaataatataggagaatggaaatctgcattagatcggtatagaa 44285  T
Q  341 ggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaa 440  Q
    |||||||   ||||||||| ||   | | || ||||| |||||||||||||||||  |||| ||| | | ||||||||| || |||||||| ||||||||    
T  44286 ggattccgattaaaaagatacaggagatacttaaagtaagctttgatgctttggagaaagatgagcagaatgtttttctcgacattgcttgctgcttcaa 44385  T
Q  441 aggatatgatttga 454  Q
    ||||||| ||||||    
T  44386 aggatataatttga 44399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 40885 - 40940
Alignment:
Q  382 tttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgctt 437  Q
    ||||||||||||||  |||| ||| ||||||||||||| || ||||||||||||||    
T  40885 tttgatgctttggagaaagatgagcaaagtgtttttctcgacattgcttgttgctt 40940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 328 - 443
Target Start/End: Original strand, 3280975 - 3281090
Alignment:
Q  328 gatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattg 427  Q
    ||||| ||||||||||||||| ||||| |||| || | | | || |||||||| |||||||||||||| ||||| ||| ||||||||||||| || ||||    
T  3280975 gatcgatatgaaaggattcctaataaagagattcagaagatacttaaagtgagttttgatgctttggaggaagacgagcaaagtgtttttctcgacattg 3281074  T
Q  428 cttgttgcttcaaagg 443  Q
    |||||||||| |||||    
T  3281075 cttgttgctttaaagg 3281090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 17662501 - 17662549
Alignment:
Q  242 cttatgcttctggccttcctttggctttagaagtaataggttctcactt 290  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  17662501 cttatgcttctggccttccattggctttggaagtaataggttctcactt 17662549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 17713527 - 17713575
Alignment:
Q  242 cttatgcttctggccttcctttggctttagaagtaataggttctcactt 290  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  17713527 cttatgcttctggccttccattggctttggaagtaataggttctcactt 17713575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 442
Target Start/End: Complemental strand, 17992039 - 17991967
Alignment:
Q  370 ctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaag 442  Q
    |||||| | |||||||||||| |||| |||||| | || ||||| ||| | ||||||||||||||||||||||    
T  17992039 ctaaaaataagctttgatgctctggatgaagaacaaaagagtgtctttttggatattgcttgttgcttcaaag 17991967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 3280890 - 3280931
Alignment:
Q  243 ttatgcttctggccttcctttggctttagaagtaataggttc 284  Q
    |||||||||||||||||| ||||| ||||||||| |||||||    
T  3280890 ttatgcttctggccttccattggcattagaagtattaggttc 3280931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 321 - 443
Target Start/End: Original strand, 60878 - 61000
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||||| ||||||  ||||| |||| ||||   | || |||||||||| |||| ||||||| ||||| ||| ||||||| |||||     
T  60878 tacattagattggtatgaaaagattcccaataaagagatccaaagaatacttaaagtgagctatgattctttggaggaagaggagcaaagtgtctttcta 60977  T
Q  421 gatattgcttgttgcttcaaagg 443  Q
    || ||||||||||||||||||||    
T  60978 gacattgcttgttgcttcaaagg 61000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 321 - 443
Target Start/End: Original strand, 18075070 - 18075192
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||||| ||||||  ||||| |||| ||||   | || |||||||||| |||| ||||||| ||||| ||| ||||||| |||||     
T  18075070 tacattagattggtatgaaaagattcccaataaagagatccaaagaatacttaaagtgagctatgattctttggaggaagaggagcaaagtgtctttcta 18075169  T
Q  421 gatattgcttgttgcttcaaagg 443  Q
    || ||||||||||||||||||||    
T  18075170 gacattgcttgttgcttcaaagg 18075192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 445
Target Start/End: Complemental strand, 18688443 - 18688371
Alignment:
Q  373 aaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaaggat 445  Q
    ||||| ||||||||||||||||| |||||| |  ||||||| ||| | ||||||||||||| |||||||||||    
T  18688443 aaagtaagctttgatgctttggacgaagaacaacaaagtgtctttttggatattgcttgtttcttcaaaggat 18688371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 445
Target Start/End: Complemental strand, 18698217 - 18698145
Alignment:
Q  373 aaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaaggat 445  Q
    ||||| ||||||||||||||||| |||||| |  ||||||| ||| | ||||||||||||| |||||||||||    
T  18698217 aaagtaagctttgatgctttggacgaagaacaacaaagtgtctttttggatattgcttgtttcttcaaaggat 18698145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 445
Target Start/End: Complemental strand, 18730321 - 18730249
Alignment:
Q  373 aaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaaggat 445  Q
    ||||| ||||||||||||||||| |||||| |  ||||||| ||| | ||||||||||||| |||||||||||    
T  18730321 aaagtaagctttgatgctttggacgaagaacaacaaagtgtctttttggatattgcttgtttcttcaaaggat 18730249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 445
Target Start/End: Complemental strand, 18722956 - 18722830
Alignment:
Q  319 tctacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttc 418  Q
    ||||||||||||   |||||||| ||||| ||| || | || |||| | | || ||||| ||||||||||||||||  |||||| |  ||||||| |||     
T  18722956 tctacattagatatgtatgaaagaattccagatgaagatatccaaaagatacttaaagtaagctttgatgctttgggcgaagaacaacaaagtgtctttt 18722857  T
Q  419 ttgatattgcttgttgcttcaaaggat 445  Q
    | ||||||||||||| |||||||||||    
T  18722856 tggatattgcttgtttcttcaaaggat 18722830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 445
Target Start/End: Complemental strand, 18678377 - 18678305
Alignment:
Q  373 aaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaaggat 445  Q
    ||||| ||||||||||||||||| |||||| |  ||| ||| ||| | ||||||||||||| |||||||||||    
T  18678377 aaagtaagctttgatgctttggacgaagaacaacaaattgtctttttggatattgcttgtttcttcaaaggat 18678305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 241 - 275
Target Start/End: Complemental strand, 5089903 - 5089869
Alignment:
Q  241 acttatgcttctggccttcctttggctttagaagt 275  Q
    |||||||||||||||||||| ||||||||||||||    
T  5089903 acttatgcttctggccttccattggctttagaagt 5089869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 18654356 - 18654222
Alignment:
Q  311 aatgtaaatctacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaag 410  Q
    ||||| ||||||||||||||   |||||||| |||||  || || | || |||| | | || ||||| || |||||||||||||| |||||| |  ||||    
T  18654356 aatgtgaatctacattagataagtatgaaagaattccacatgaagatatccaaaagatacttaaagtaagttttgatgctttggatgaagaacaacaaag 18654257  T
Q  411 tgtttttcttgatattgcttgttgcttcaaaggat 445  Q
    ||| ||| | |||||||||||||  ||||||||||    
T  18654256 tgtctttttggatattgcttgtttgttcaaaggat 18654222  T

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Target: scaffold0007 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 411 - 544
Target Start/End: Original strand, 32365 - 32498
Alignment:
Q  411 tgtttttcttgatattgcttgttgcttcaaaggatatgatttgacattcgtcaataaaatgcttcatgctcatcatggtgacaacatggaagatcacatg 510  Q
    |||||||||||| || ||||||| |||||||||| || |||||  ||  ||||| ||||| |||||||||||| |||||||| | | | ||||||| ||     
T  32365 tgtttttcttgacatagcttgtttcttcaaaggagataatttggaatatgtcaaaaaaatacttcatgctcattatggtgacgagaagaaagatcatatc 32464  T
Q  511 caggtgttagtggagaaatctctcataaagataa 544  Q
     | |||||| | || |||||||||||||||||||    
T  32465 aatgtgttaattgaaaaatctctcataaagataa 32498  T

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Target: scaffold0007; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 411 - 544
Target Start/End: Original strand, 37114 - 37247
Alignment:
Q  411 tgtttttcttgatattgcttgttgcttcaaaggatatgatttgacattcgtcaataaaatgcttcatgctcatcatggtgacaacatggaagatcacatg 510  Q
    |||||||||||| || ||||||| |||||||||| || |||||  ||  ||||| ||||| |||||||||||| |||||||| | | | ||||||| ||     
T  37114 tgtttttcttgacatagcttgtttcttcaaaggagataatttggaatatgtcaaaaaaatacttcatgctcattatggtgacgagaagaaagatcatatc 37213  T
Q  511 caggtgttagtggagaaatctctcataaagataa 544  Q
     | |||||| | || |||||||||||||||||||    
T  37214 aatgtgttaattgaaaaatctctcataaagataa 37247  T

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Target: scaffold0007; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 544
Target Start/End: Original strand, 67674 - 67845
Alignment:
Q  373 aaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaaggatatgatttgacattcgtcaataaaatgc 472  Q
    ||||||||||| |||| |||||   |||| || |||  |||||||||||| || ||||||| |||||||||| ||  ||||  |   ||||| ||||| |    
T  67674 aaagtgagcttcgatgatttggtccaagatgataaagatgtttttcttgacatagcttgtttcttcaaaggacattgtttggaagaagtcaaaaaaatac 67773  T
Q  473 ttcatgctcatcatggtgacaacatggaagatcacatgcaggtgttagtggagaaatctctcataaagataa 544  Q
    ||||||||||| |||||||| | | | ||||||| ||  | |||||| | || |||||||||||||||||||    
T  67774 ttcatgctcattatggtgacgaaaagaaagatcatatcaatgtgttaattgaaaaatctctcataaagataa 67845  T

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Target: scaffold1870 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 321 - 445
Target Start/End: Original strand, 78 - 202
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||||| ||||||  |||||||||| ||   | | || ||||| |||| |||||||||||| |||||  || |||||||||||||     
T  78 tacattagatggatatgaaaagattcccaataaaaagatccacgagatacttaaagtaagctatgatgctttggaggaagagcagcaaagtgtttttcta 177  T
Q  421 gatattgcttgttgcttcaaaggat 445  Q
    || ||||| ||||||||||||||||    
T  178 gacattgcctgttgcttcaaaggat 202  T

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Target: scaffold0277 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 321 - 445
Target Start/End: Complemental strand, 3585 - 3461
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||||| ||||||  |||||||||| ||   | | || ||||| |||| |||||||||||| |||||  || |||||||||||||     
T  3585 tacattagatggatatgaaaagattcccaataaaaagatccaccagatacttaaagtaagctatgatgctttggaggaagagcagcaaagtgtttttcta 3486  T
Q  421 gatattgcttgttgcttcaaaggat 445  Q
    || ||||| ||||||||||||||||    
T  3485 gacattgcctgttgcttcaaaggat 3461  T

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Target: scaffold0277; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 321 - 445
Target Start/End: Complemental strand, 12548 - 12424
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||||| ||||||  |||||||||| ||   | | || ||||| |||| |||||||||||| |||||  || |||||||||||||     
T  12548 tacattagatggatatgaaaagattcccaataaaaagatccacgagatacttaaagtaagctatgatgctttggaggaagagcagcaaagtgtttttcta 12449  T
Q  421 gatattgcttgttgcttcaaaggat 445  Q
    || ||||| ||||||||||||||||    
T  12448 gacattgcctgttgcttcaaaggat 12424  T

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Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 452
Target Start/End: Complemental strand, 57247 - 57036
Alignment:
Q  241 acttatgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgtaaatctacattagatcgttatgaaa 340  Q
    ||||||||||| |||||||| ||||| ||||||||| | |||||  |||| |||   || |   ||| | |||| |||||| ||||| |||  |||||||    
T  57247 acttatgcttcaggccttccattggccttagaagtagtgggttcgaacttgtttggaaagaatataggagaatggaaatctgcattaaatcagtatgaaa 57148  T
Q  341 ggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaa 440  Q
    |||||||   ||||||||| |||  | | || ||||| ||||||||||||||||| ||||| ||||| | ||||||||| || ||| |||||| |||  |    
T  57147 ggattcccattaaaaagatccaagagatacttaaagtaagctttgatgctttggaggaagatgagaagaatgtttttctcgacatttcttgtttcttaga 57048  T
Q  441 aggatatgattt 452  Q
    ||||| ||||||    
T  57047 aggatgtgattt 57036  T

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Target: scaffold0419 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 445
Target Start/End: Original strand, 8796 - 8920
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||||| ||||||  |||||||||| ||   | | || ||||| || | |||||||||||| |||||  || |||||||||||||     
T  8796 tacattagatggatatgaaaagattcccaataaaaagatccacgagatacttaaagtaagttatgatgctttggaggaagagcagcaaagtgtttttcta 8895  T
Q  421 gatattgcttgttgcttcaaaggat 445  Q
    || ||||| ||||||||||||||||    
T  8896 gacattgcctgttgcttcaaaggat 8920  T

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Target: scaffold0349 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 441
Target Start/End: Complemental strand, 2412 - 2292
Alignment:
Q  321 tacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgtttttctt 420  Q
    |||||||||| | ||||| ||||||||  ||||| |||| |||| | | || ||||| || | |||||||||||| |||||  || ||||||| |||||     
T  2412 tacattagatgggtatgacaggattcccaataaagagatccaaaagatacttaaagtaagttatgatgctttggaggaagagcagcaaagtgtctttcta 2313  T
Q  421 gatattgcttgttgcttcaaa 441  Q
    || ||||||||||||||||||    
T  2312 gacattgcttgttgcttcaaa 2292  T

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Target: scaffold0573 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 544
Target Start/End: Complemental strand, 7828 - 7657
Alignment:
Q  373 aaagtgagctttgatgctttggaagaagaagagaaaagtgtttttcttgatattgcttgttgcttcaaaggatatgatttgacattcgtcaataaaatgc 472  Q
    ||||||||||| |||| |||||   |||||||||||  |||||||||||| || |||||||  ||||||||| |  | |||  |   ||| | | ||| |    
T  7828 aaagtgagcttcgatgatttggtccaagaagagaaagatgtttttcttgacatagcttgttttttcaaaggagaacaattggaagatgtcgaaataatac 7729  T
Q  473 ttcatgctcatcatggtgacaacatggaagatcacatgcaggtgttagtggagaaatctctcataaagataa 544  Q
    ||||||||||| |||||||| | | | ||||||||||  | |||||| | || |||||||||||||||||||    
T  7728 ttcatgctcattatggtgacgaaaagaaagatcacatcaatgtgttaattgaaaaatctctcataaagataa 7657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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