View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16803_low_51 (Length: 253)
Name: NF16803_low_51
Description: NF16803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16803_low_51 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 16 - 253
Target Start/End: Original strand, 48080903 - 48081140
Alignment:
| Q |
16 |
aatatgcattccaccactctcctcttctccaaaaaccttccctacattcccttcttccgaagttccaaccctagcttgctcatccaccgcacgattcatc |
115 |
Q |
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| T |
48080903 |
aatatgcattccaccactctcctcttctccaaaaaccttccctacattcccttcttccgaagttccaaccctagcttgctcatccaccgcacgattcatc |
48081002 |
T |
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| Q |
116 |
ccttgtttcctctcataatactgagtcccaacgaaatcaagcaaaagagtaaacaacgccgccatcatcgcgaaaaaaccggtaaacggaaacttcgacc |
215 |
Q |
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| T |
48081003 |
ccttgtttcctctcataatactgagtcccaacgaaatcaagcaaaagagtaaacaacgccgccatcatcgcgaaaaaaccggtaaacggaaacttcgacc |
48081102 |
T |
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| Q |
216 |
atggaaactccggtaaacaaggactgttaagagcttct |
253 |
Q |
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| T |
48081103 |
atggaaactccggtaaacaaggactgttaagagcttct |
48081140 |
T |
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