View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16803_low_64 (Length: 216)
Name: NF16803_low_64
Description: NF16803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16803_low_64 |
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Alignment Details
Target: chr4 (Bit Score: 189; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-103
Query Start/End: Original strand, 6 - 198
Target Start/End: Complemental strand, 39483741 - 39483549
Alignment:
| Q |
6 |
ttggtttttagaaatcagaacctccctagttgtttccttcgttagaaaaaatcacatacccacgtttgttttgaaattttattttgaatatatattaaaa |
105 |
Q |
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| T |
39483741 |
ttggtttttagaaatcagaacctccctagttgtttccttcgttagaaaaaatcacatacccacgtttgttttgaaattttattttgaatatatattaaaa |
39483642 |
T |
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| Q |
106 |
atatcacatatttcaattcaagtcactttccacattttagtcaagacaccaaatgctactatccatgctataaaaaggactcaaaatctcttc |
198 |
Q |
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| T |
39483641 |
atatcacatatttcaattcaagtcactttccacattttagtcaagacaccaaatgctactatccatgctataaaaaggactctaaatctcttc |
39483549 |
T |
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