View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16804_low_14 (Length: 363)
Name: NF16804_low_14
Description: NF16804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16804_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 12 - 345
Target Start/End: Complemental strand, 26944881 - 26944543
Alignment:
| Q |
12 |
agtagcataggttgctcatccatttgagaagttgaggactcaacgtttcctaactcagagttcattccctccactttttgcttcaactcttctatgtatt |
111 |
Q |
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| T |
26944881 |
agtaccataggttgctcatccatttgagaagttgaggactcaacgtttcctaactcagagttcattccctccactttttgcttcaactcttttatgtatt |
26944782 |
T |
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| Q |
112 |
tggaggcgtccacaataattgaggctttgttcatctgccaattacccatttcaaattaattaaaggaggtccatagttcaatattttctactaa-----a |
206 |
Q |
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| T |
26944781 |
tggaggcgtccacaataattgaggctttgttcatctgccaattacccatttgaaattaattaaaggaggtccatagttcaatattttctactaaaatata |
26944682 |
T |
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| Q |
207 |
attaacatttccatgtaagaaaaacataagtaatagcattgtatcttcattgtaagaaaaacatatatgctaattcttatagcttctgtttagtagattt |
306 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26944681 |
attaacatttgcatgtaagaaaaacataagtaatagcattgtatcttcattgtaagaaaaacatatatgctaattcttatagcttctgtttagtagattt |
26944582 |
T |
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| Q |
307 |
tggttttctcaccctttggttccaatgtggtggctttgt |
345 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
26944581 |
tggttttctcaccctttggttccaatgtggtggctttgt |
26944543 |
T |
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