View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16804_low_16 (Length: 338)

Name: NF16804_low_16
Description: NF16804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16804_low_16
NF16804_low_16
[»] chr7 (25 HSPs)
chr7 (7-294)||(18873133-18873420)
chr7 (7-289)||(15167948-15168230)
chr7 (7-285)||(10895795-10896073)
chr7 (7-293)||(14422758-14423043)
chr7 (16-300)||(12709833-12710117)
chr7 (16-300)||(13122904-13123188)
chr7 (7-289)||(16009351-16009631)
chr7 (16-300)||(13743492-13743774)
chr7 (81-300)||(12590633-12590850)
chr7 (7-300)||(13007207-13007497)
chr7 (93-287)||(16677152-16677348)
chr7 (93-287)||(17651388-17651584)
chr7 (234-326)||(21230923-21231015)
chr7 (234-313)||(20311026-20311107)
chr7 (234-289)||(11382871-11382926)
chr7 (234-289)||(11389348-11389403)
chr7 (234-326)||(148619-148711)
chr7 (170-289)||(13679428-13679548)
chr7 (235-290)||(2971254-2971309)
chr7 (235-290)||(20906461-20906516)
chr7 (235-289)||(11311059-11311113)
chr7 (254-295)||(831628-831669)
chr7 (254-295)||(1196808-1196849)
chr7 (254-295)||(34958578-34958619)
chr7 (233-289)||(46625961-46626017)
[»] chr5 (15 HSPs)
chr5 (7-294)||(22750914-22751201)
chr5 (14-326)||(38144500-38144810)
chr5 (7-289)||(28370055-28370335)
chr5 (7-289)||(19512160-19512441)
chr5 (81-294)||(23528479-23528690)
chr5 (234-313)||(22438723-22438803)
chr5 (234-326)||(42961566-42961658)
chr5 (225-289)||(18407944-18408008)
chr5 (225-289)||(23111200-23111264)
chr5 (274-326)||(1856445-1856497)
chr5 (274-326)||(21674415-21674467)
chr5 (235-290)||(19236900-19236955)
chr5 (175-301)||(34830024-34830150)
chr5 (237-290)||(22461158-22461211)
chr5 (237-290)||(22467782-22467835)
[»] chr3 (24 HSPs)
chr3 (7-289)||(14762758-14763040)
chr3 (7-287)||(38310802-38311082)
chr3 (7-287)||(20247791-20248063)
chr3 (7-287)||(24192728-24193009)
chr3 (7-289)||(9534102-9534382)
chr3 (7-290)||(23370505-23370787)
chr3 (5-287)||(55499104-55499385)
chr3 (7-290)||(24933828-24934109)
chr3 (121-313)||(16801444-16801635)
chr3 (81-300)||(41455087-41455304)
chr3 (228-289)||(18929239-18929300)
chr3 (225-289)||(17240513-17240577)
chr3 (274-326)||(24122221-24122273)
chr3 (274-326)||(13967762-13967814)
chr3 (274-326)||(13973237-13973289)
chr3 (30-290)||(10389443-10389702)
chr3 (235-290)||(13302240-13302295)
chr3 (235-290)||(13323787-13323842)
chr3 (176-290)||(10414532-10414646)
chr3 (176-290)||(10421202-10421316)
chr3 (235-290)||(12033444-12033499)
chr3 (235-290)||(13312896-13312951)
chr3 (235-290)||(17131732-17131787)
chr3 (235-290)||(51301589-51301644)
[»] scaffold0026 (2 HSPs)
scaffold0026 (7-306)||(11834-12133)
scaffold0026 (7-290)||(111460-111741)
[»] scaffold1773 (1 HSPs)
scaffold1773 (13-297)||(958-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (13-297)||(49959-50241)
[»] chr4 (13 HSPs)
chr4 (16-300)||(8045822-8046105)
chr4 (13-300)||(11847886-11848179)
chr4 (101-290)||(53483573-53483760)
chr4 (234-326)||(15408139-15408231)
chr4 (100-290)||(27906130-27906321)
chr4 (233-289)||(8834895-8834951)
chr4 (233-289)||(13888641-13888697)
chr4 (206-287)||(14486632-14486713)
chr4 (233-289)||(15245215-15245271)
chr4 (233-284)||(22724691-22724742)
chr4 (275-326)||(43284008-43284059)
chr4 (254-295)||(15747551-15747592)
chr4 (233-289)||(15308120-15308176)
[»] chr6 (24 HSPs)
chr6 (56-289)||(23057760-23057993)
chr6 (7-300)||(29614136-29614429)
chr6 (15-289)||(23838980-23839253)
chr6 (29-326)||(18800233-18800529)
chr6 (14-300)||(10986170-10986455)
chr6 (7-289)||(4477631-4477912)
chr6 (5-287)||(21565214-21565494)
chr6 (155-300)||(930085-930229)
chr6 (7-300)||(12168138-12168428)
chr6 (7-300)||(19287047-19287337)
chr6 (7-300)||(19785859-19786149)
chr6 (7-300)||(19878231-19878521)
chr6 (7-300)||(19884007-19884297)
chr6 (101-290)||(34639986-34640173)
chr6 (101-290)||(34646660-34646847)
chr6 (234-326)||(24512807-24512899)
chr6 (176-290)||(25469704-25469816)
chr6 (93-289)||(9187352-9187550)
chr6 (233-289)||(25397172-25397228)
chr6 (233-289)||(19471335-19471391)
chr6 (233-289)||(25348486-25348542)
chr6 (206-290)||(31252394-31252478)
chr6 (233-287)||(25598643-25598697)
chr6 (275-326)||(933615-933666)
[»] chr8 (17 HSPs)
chr8 (7-287)||(8727735-8728015)
chr8 (7-290)||(44477397-44477678)
chr8 (7-290)||(44492555-44492836)
chr8 (16-300)||(23866396-23866680)
chr8 (15-326)||(27940815-27941127)
chr8 (81-300)||(17054440-17054656)
chr8 (180-289)||(18614217-18614327)
chr8 (234-326)||(14056527-14056619)
chr8 (225-289)||(23482053-23482117)
chr8 (234-322)||(25111976-25112064)
chr8 (274-326)||(30765873-30765925)
chr8 (233-289)||(39364919-39364975)
chr8 (235-289)||(29643386-29643440)
chr8 (235-290)||(24320670-24320725)
chr8 (265-325)||(21325730-21325791)
chr8 (266-325)||(21321132-21321192)
chr8 (233-289)||(21931696-21931752)
[»] chr2 (19 HSPs)
chr2 (7-289)||(19661454-19661734)
chr2 (7-289)||(6483492-6483772)
chr2 (7-289)||(6486959-6487239)
chr2 (5-300)||(26583600-26583892)
chr2 (5-287)||(23089057-23089337)
chr2 (5-287)||(23878781-23879060)
chr2 (5-289)||(23101463-23101745)
chr2 (176-290)||(5706023-5706137)
chr2 (275-326)||(6260135-6260186)
chr2 (225-289)||(23265133-23265197)
chr2 (225-289)||(23280201-23280265)
chr2 (228-289)||(21908353-21908414)
chr2 (282-326)||(19665037-19665081)
chr2 (233-289)||(24661576-24661632)
chr2 (235-290)||(10577-10632)
chr2 (109-300)||(23168288-23168483)
chr2 (109-300)||(23579545-23579740)
chr2 (235-290)||(25180929-25180984)
chr2 (218-299)||(26885166-26885246)
[»] scaffold0025 (1 HSPs)
scaffold0025 (7-287)||(14398-14678)
[»] scaffold0924 (1 HSPs)
scaffold0924 (13-300)||(740-1027)
[»] scaffold0029 (1 HSPs)
scaffold0029 (7-300)||(111674-111948)
[»] chr1 (12 HSPs)
chr1 (7-289)||(20437024-20437305)
chr1 (81-300)||(41111884-41112100)
chr1 (225-289)||(32651563-32651627)
chr1 (234-289)||(19663517-19663572)
chr1 (225-289)||(18712790-18712854)
chr1 (233-289)||(20805320-20805376)
chr1 (234-289)||(11158093-11158148)
chr1 (233-287)||(10811785-10811839)
chr1 (235-290)||(20851132-20851187)
chr1 (235-290)||(20857759-20857814)
chr1 (235-290)||(21706276-21706331)
chr1 (235-290)||(21710818-21710873)
[»] scaffold0247 (1 HSPs)
scaffold0247 (7-326)||(11116-11433)
[»] scaffold0553 (1 HSPs)
scaffold0553 (7-290)||(10195-10477)
[»] scaffold0544 (1 HSPs)
scaffold0544 (7-290)||(1525-1807)
[»] scaffold0117 (2 HSPs)
scaffold0117 (7-300)||(1887-2179)
scaffold0117 (7-300)||(8564-8856)
[»] scaffold0090 (1 HSPs)
scaffold0090 (13-326)||(17948-18261)
[»] scaffold0058 (1 HSPs)
scaffold0058 (16-300)||(75-356)
[»] scaffold0154 (1 HSPs)
scaffold0154 (93-326)||(30715-30949)
[»] scaffold0476 (1 HSPs)
scaffold0476 (5-287)||(3295-3576)
[»] scaffold0077 (1 HSPs)
scaffold0077 (5-287)||(3624-3904)
[»] scaffold0634 (1 HSPs)
scaffold0634 (7-130)||(3435-3558)
[»] scaffold0796 (2 HSPs)
scaffold0796 (7-295)||(1727-2013)
scaffold0796 (99-295)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (207-294)||(904-991)
scaffold0456 (207-294)||(8049-8136)
scaffold0456 (50-146)||(806-901)
scaffold0456 (50-146)||(7951-8046)
[»] scaffold0107 (1 HSPs)
scaffold0107 (234-326)||(40495-40587)
[»] scaffold0129 (1 HSPs)
scaffold0129 (178-296)||(45268-45386)
[»] scaffold0019 (1 HSPs)
scaffold0019 (234-323)||(135473-135562)
[»] scaffold0235 (1 HSPs)
scaffold0235 (236-326)||(22556-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (234-313)||(17643-17723)
[»] scaffold0222 (1 HSPs)
scaffold0222 (225-289)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (225-289)||(116887-116951)
[»] scaffold0124 (1 HSPs)
scaffold0124 (234-289)||(34276-34331)
[»] scaffold0461 (1 HSPs)
scaffold0461 (225-289)||(8-72)
[»] scaffold0249 (1 HSPs)
scaffold0249 (282-326)||(2212-2256)
[»] scaffold0146 (1 HSPs)
scaffold0146 (225-289)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (225-289)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (238-300)||(1453-1515)
[»] scaffold0261 (1 HSPs)
scaffold0261 (100-300)||(23559-23760)
[»] scaffold2054 (1 HSPs)
scaffold2054 (201-300)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (206-290)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (170-289)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (233-289)||(12296-12352)
[»] scaffold0139 (1 HSPs)
scaffold0139 (234-289)||(14997-15052)
[»] scaffold0790 (1 HSPs)
scaffold0790 (268-301)||(5487-5520)
[»] scaffold0001 (1 HSPs)
scaffold0001 (218-299)||(493019-493099)
[»] scaffold0348 (2 HSPs)
scaffold0348 (275-323)||(14620-14668)
scaffold0348 (235-290)||(9336-9391)
[»] scaffold0096 (1 HSPs)
scaffold0096 (233-293)||(39503-39563)
[»] scaffold0034 (1 HSPs)
scaffold0034 (100-287)||(73149-73337)
[»] scaffold0127 (1 HSPs)
scaffold0127 (235-290)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (235-290)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (235-289)||(1913-1967)
[»] scaffold0453 (1 HSPs)
scaffold0453 (206-290)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (233-289)||(2628-2684)


Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 7 - 294
Target Start/End: Original strand, 18873133 - 18873420
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||    
T  18873133 catcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagca 18873232  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18873233 acaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 18873332  T
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18873333 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 7 - 289
Target Start/End: Original strand, 15167948 - 15168230
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||    
T  15167948 catcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagca 15168047  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15168048 acaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 15168147  T
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168148 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 7 - 285
Target Start/End: Complemental strand, 10896073 - 10895795
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||    
T  10896073 catcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagca 10895974  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||| | |||||| ||||| |||||||||||||||||||||||||| ||||    
T  10895973 acaaagattaagttttcattctgaacattatattacaagagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaat 10895875  T
Q  207 ttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttac 285  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  10895874 ttatcttccaaaaactatgcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 7 - 293
Target Start/End: Original strand, 14422758 - 14423043
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  14422758 catcaacaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 14422856  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
    | |||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||    
T  14422857 atatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaat 14422955  T
Q  207 ttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttt 293  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14422956 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 300
Target Start/End: Complemental strand, 12710117 - 12709833
Alignment:
Q  16 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagat 114  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||| |||| |||||||||||||||| ||||    
T  12710117 caacaatcacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agat 12710019  T
Q  115 taagttttcattctgaacattatattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt 213  Q
    |||||||  |||||||||||||||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||    
T  12710018 taagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttatttt 12709919  T
Q  214 ccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12709918 ccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 12709833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 300
Target Start/End: Complemental strand, 13123188 - 13122904
Alignment:
Q  16 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagat 114  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||| |||| |||||||||||||||| ||||    
T  13123188 caacaatcacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agat 13123090  T
Q  115 taagttttcattctgaacattatattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt 213  Q
    |||||||  |||||||||||||||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||    
T  13123089 taagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttatttt 13122990  T
Q  214 ccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13122989 ccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13122904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 7 - 289
Target Start/End: Original strand, 16009351 - 16009631
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| ||||||| |||||||||||| |||||    
T  16009351 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcagtttatgatcacaacaaca 16009449  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
      |||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| |||||||||||||||||| |||||| ||||    
T  16009450 gtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccttaacccacaat 16009548  T
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16009549 ttatcttccaaaaccatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 16 - 300
Target Start/End: Original strand, 13743492 - 13743774
Alignment:
Q  16 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagatt 115  Q
    ||||||| |||  ||| |||||||| |||||   ||||||||||| |||||| |   ||||||| |||| ||||||||||||||||||| ||||||||||    
T  13743492 caacaatcacatatcactccaccattatacaattattcatcaatttatccaaccaagcataatt-tcaaccaatttatgatcacagcaataacatagatt 13743590  T
Q  116 aagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc 215  Q
    |||| |||| ||||||||  ||| ||||| | |||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||    
T  13743591 aagtcttcaatctgaacagcataatacaagaaaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttcc 13743690  T
Q  216 aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13743691 aaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13743774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 81 - 300
Target Start/End: Complemental strand, 12590850 - 12590633
Alignment:
Q  81 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 179  Q
    |||||||||| ||| || ||||||||||||| ||||||| ||||||||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  12590850 tcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcatt--ccatcag 12590753  T
Q  180 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 279  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  12590752 aatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 12590654  T
Q  280 ccttaccttagttttgcagaa 300  Q
    |||||||||||||||||||||    
T  12590653 ccttaccttagttttgcagaa 12590633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 7 - 300
Target Start/End: Original strand, 13007207 - 13007497
Alignment:
Q  7 catcatcaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 104  Q
    ||||| |||||||||||| ||  |||||||||||||| |||  | ||||||||||||| ||||   ||  || | |||||||||| ||| || |||||||    
T  13007207 catcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaattcatccaaaat-tcaatcaattcatggattacagcaa 13007305  T
Q  105 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 204  Q
    |||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||||||||||||||||||||||  |||    
T  13007306 caacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttca 13007402  T
Q  205 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
      |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13007403 tcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 13007497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 93 - 287
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  93 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 192  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 16677251  T
Q  193 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 287  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  16677252 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 93 - 287
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  93 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 192  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 17651487  T
Q  193 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 287  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  17651488 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 21231015 - 21230923
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttccta 21230923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 20311107 - 20311026
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag--ttttgcagaatgattacacagca 313  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||  |||||||||| |||| |||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaaagattgcacagca 20311026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 148619 - 148711
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    |||||||||||||  ||| ||||| || || ||  | ||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  148619 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacaacacaatcagttccta 148711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 289
Target Start/End: Original strand, 13679428 - 13679548
Alignment:
Q  170 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgaga 268  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| || || |    
T  13679428 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 13679527  T
Q  269 gatagtctcacccttacctta 289  Q
    |||||||||||||||||||||    
T  13679528 gatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 289
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||||| ||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  254 ttatgattatcgagagatagtctcacccttaccttagttttg 295  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  254 ttatgattatcgagagatagtctcacccttaccttagttttg 295  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  254 ttatgattatcgagagatagtctcacccttaccttagttttg 295  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||||| ||||||||| ||||| || || ||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 7 - 294
Target Start/End: Original strand, 22750914 - 22751201
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||    
T  22750914 catcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagca 22751013  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22751014 acaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 22751113  T
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22751114 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 14 - 326
Target Start/End: Complemental strand, 38144810 - 38144500
Alignment:
Q  14 aacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacataga 113  Q
    |||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  || ||||| |||||||||||||||||||| |||||  |||||    
T  38144810 aacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcgtaatt-tcaatcaatttatgatcacaacaacagtataga 38144712  T
Q  114 ttaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt 213  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||| ||    
T  38144711 ttaagttttcattctaaacattacattacaatagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatttt 38144613  T
Q  214 ccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagca 313  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144612 ccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagca 38144513  T
Q  314 caatcggttccta 326  Q
    |||||||||||||    
T  38144512 caatcggttccta 38144500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 7 - 289
Target Start/End: Complemental strand, 28370335 - 28370055
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||| ||||| |||||||||||||||||| |  ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||    
T  28370335 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaaca 28370237  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
      |||||||||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||    
T  28370236 gtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaat 28370138  T
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28370137 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 7 - 289
Target Start/End: Original strand, 19512160 - 19512441
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  19512160 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 19512258  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
      |||||||||||||||||||| |||||||  |||||| |||||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||    
T  19512259 gtatagattaagttttcattctaaacattacgttacaatagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaat 19512357  T
Q  207 ttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19512358 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 81 - 294
Target Start/End: Original strand, 23528479 - 23528690
Alignment:
Q  81 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 179  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  23528479 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcatt--ccatcag 23528576  T
Q  180 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 279  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  23528577 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 23528675  T
Q  280 ccttaccttagtttt 294  Q
    |||||||||||||||    
T  23528676 ccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 22438803 - 22438723
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag-ttttgcagaatgattacacagca 313  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaaagattgcacagca 22438723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 42961566 - 42961658
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    |||||||||||||| ||| ||||| || || ||  | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 42961658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  225 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  225 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 1856497 - 1856445
Alignment:
Q  274 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  1856497 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 1856445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 21674467 - 21674415
Alignment:
Q  274 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  21674467 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 21674415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 301
Target Start/End: Original strand, 34830024 - 34830150
Alignment:
Q  175 ttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatag 273  Q
    |||| ||||| ||||| |||||||  |||||||| |||||| | |||||| | ||||| |  |||||||||||||||| ||||  ||||| || |||||     
T  34830024 ttcaaaatcagcatcataccctaattctcaattttatcttcaagaactattctattagattgattttcagaaattatacatta-aattattgaaagataa 34830122  T
Q  274 tctcacccttaccttagttttgcagaat 301  Q
    || ||||||||||||||  |||||||||    
T  34830123 tcccacccttaccttagaattgcagaat 34830150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 290
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  237 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 290
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  237 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 7 - 289
Target Start/End: Complemental strand, 14763040 - 14762758
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||    
T  14763040 catcaacaacaacaattacagatcactccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagca 14762941  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14762940 acaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 14762841  T
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762840 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 7 - 287
Target Start/End: Complemental strand, 38311082 - 38310802
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| ||    
T  38311082 catcaacaacaacaattacagatcattccaccttcatacacaaattcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagca 38310983  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38310982 acaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 38310883  T
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 287  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310882 ttatcttccaaaactatgcaattaggtcaatattcagaaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 7 - 287
Target Start/End: Complemental strand, 20248063 - 20247791
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||        ||||| ||||||||| ||||||||||||||||||||||| ||    
T  20248063 catcaacaacaacaattacagatcattccaccatcatacacaaattcatc--------caatcactcataattttcaatcaatttatgatcacagcagca 20247972  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
    ||| |||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20247971 acaaagattaagttttcattctgaacattatattacaagaaaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 20247872  T
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20247871 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 7 - 287
Target Start/End: Original strand, 24192728 - 24193009
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgat-cacagcaac 105  Q
    ||||| |||||| || ||||| |||||||||||||||||  | ||||||||||| ||||||||  ||||| || ||||||| |||||||| |||||||||    
T  24192728 catcaacaacaagaaatacagatcattccaccatcataccaatattcatcaatttatccaatcaatcatattt-tcaatcagtttatgattcacagcaac 24192826  T
Q  106 aacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa 205  Q
    | ||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24192827 agcatagattaagttttcattctgaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaa 24192926  T
Q  206 tttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 287  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24192927 tttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 7 - 289
Target Start/End: Original strand, 9534102 - 9534382
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||  |||||    
T  9534102 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacgacaaca 9534200  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
      |||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| | || ||||||||||||||||||||||||||||||    
T  9534201 gtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattccact-cagaatcatcatcaaaccctaaccctcaat 9534299  T
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9534300 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 7 - 290
Target Start/End: Complemental strand, 23370787 - 23370505
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  23370787 catcaacaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 23370689  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
      |||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||    
T  23370688 gtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaat 23370590  T
Q  207 ttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  23370589 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 55499385 - 55499104
Alignment:
Q  5 gacatcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaa 104  Q
    ||||||| |||||||||| |||| |||||||||||||||||| || || ||||||||||||||||  | ||| || ||||||||||||||||||||||||    
T  55499385 gacatcaacaacaacaat-acagatcattccaccatcatacaaaacttgatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaa 55499288  T
Q  105 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 204  Q
    |   |||||||||| |||||||| |||||| | ||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||    
T  55499287 ctgtatagattaagatttcattccgaacatcacattacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctca 55499189  T
Q  205 a-tttatcttccaaaactatgcaattaggtcaatttt-cagaaattatagattat-gattatcgagagatagtctcacccttacct 287  Q
    | |||||| | |||   || ||| ||||||||||||| | ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  55499188 attttatcct-caaggttaagcagttaggtcaattttcccgaaattacatattatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 290
Target Start/End: Complemental strand, 24934109 - 24933828
Alignment:
Q  7 catcatcaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 104  Q
    ||||| || ||||||||||||  |||||| ||||||||||| | |||||||||||||| ||||   ||| || | |||||||||| ||| ||  ||||||    
T  24934109 catcaacagcaacaattacagaatcattctaccatcatacaaatattcatcaattcatacaatacatcaaaaat-tcaatcaattaatggattgcagcaa 24934011  T
Q  105 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 204  Q
    |||||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||   |||    
T  24934010 caacatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaattttca 24933913  T
Q  205 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
      |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24933912 tattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 121 - 313
Target Start/End: Complemental strand, 16801635 - 16801444
Alignment:
Q  121 ttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaa 219  Q
    |||||||| ||||| | |||||| || | |||||||||| ||||| |  ||| | ||| |||||||||||| |||||||| ||||||| |||||| |||     
T  16801635 ttcattctaaacatcacattacagcatatttaacatgatcattacaccattctcctcaaaatcatcatcaa-ccctaaccttcaattttatcttcaaaag 16801537  T
Q  220 ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagca 313  Q
    ||| ||||| |||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16801536 ctaagcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagca 16801444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 81 - 300
Target Start/End: Complemental strand, 41455304 - 41455087
Alignment:
Q  81 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 179  Q
    |||||||||| ||| || |||||||| | || ||||||| |||||||||  |||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  41455304 tcaatcaattcatggattacagcaaccatatggattaagatttcattcttgacattaaatttcaagaaaactaacatcatctttactcatt--ccatcag 41455207  T
Q  180 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 279  Q
    |||||||||||| ||||||   |||   ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41455206 aatcatcatcaatccctaattttcatcctattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41455108  T
Q  280 ccttaccttagttttgcagaa 300  Q
    |||||||||||||||||||||    
T  41455107 ccttaccttagttttgcagaa 41455087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 228 - 289
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  228 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  225 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 24122273 - 24122221
Alignment:
Q  274 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  24122273 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 24122221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 13967814 - 13967762
Alignment:
Q  274 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  13967814 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 13967762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 13973289 - 13973237
Alignment:
Q  274 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  13973289 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 13973237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 290
Target Start/End: Complemental strand, 10389702 - 10389443
Alignment:
Q  30 cattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaacaacatagattaagttttcattct 128  Q
    ||||| |||| |||||| | |||||||||||||| ||||   ||| || | |||||||||| ||| ||  |||||||||||| | ||||| |||||||||    
T  10389702 cattctaccaacatacaaatattcatcaattcatacaattcatcaaaaat-tcaatcaattaatggattgcagcaacaacatgggttaagctttcattct 10389604  T
Q  129 gaacattatattacaacagaat-taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaa 227  Q
     ||| ||| ||| | | | ||  |||||| ||  |||||||||  || |||||||||||||||||||||||   |||  ||||  |  |||||||| |||    
T  10389603 taacgttaaattccgagaaaaactaacatcatctttacccatt--ccatcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaa 10389506  T
Q  228 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    |||| | | ||||||||||||||| ||||| || || || ||||| || ||||||||||||||    
T  10389505 ttagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 290
Target Start/End: Complemental strand, 10414646 - 10414532
Alignment:
Q  176 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 275  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10414646 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10414547  T
Q  276 tcacccttaccttag 290  Q
     ||||||||||||||    
T  10414546 ccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 290
Target Start/End: Complemental strand, 10421316 - 10421202
Alignment:
Q  176 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 275  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10421316 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10421217  T
Q  276 tcacccttaccttag 290  Q
     ||||||||||||||    
T  10421216 ccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    |||||||| |||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||| | ||||||||||| |  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 244; Significance: 1e-135; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 7 - 306
Target Start/End: Complemental strand, 12133 - 11834
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||||||||||||||    
T  12133 catcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaaca 12034  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
    ||| ||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  12033 acaaagattaagttttcattctgaagattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaat 11934  T
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgatta 306  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  11933 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaagatta 11834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 7 - 290
Target Start/End: Original strand, 111460 - 111741
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  111460 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 111558  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
      |||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||    
T  111559 gtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaat 111657  T
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  111658 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 13 - 297
Target Start/End: Original strand, 958 - 1240
Alignment:
Q  13 caacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatag 112  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| ||    
T  958 caacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-ag 1056  T
Q  113 attaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatct 212  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |    
T  1057 attaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattt 1156  T
Q  213 tccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgca 297  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1157 tccaaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 13 - 297
Target Start/End: Original strand, 49959 - 50241
Alignment:
Q  13 caacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatag 112  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| ||    
T  49959 caacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-ag 50057  T
Q  113 attaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatct 212  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |    
T  50058 attaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattt 50157  T
Q  213 tccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgca 297  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50158 tccaaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgca 50241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 221; Significance: 1e-121; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 16 - 300
Target Start/End: Complemental strand, 8046105 - 8045822
Alignment:
Q  16 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagatt 115  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||  ||||    
T  8046105 caacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaaggatt 8046006  T
Q  116 aagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc 215  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||  |||||||||||||||||||||  || ||||||||||||||||||||||| ||||    
T  8046005 aagttttcattctgaacattatattacaagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatttattttcc 8045906  T
Q  216 aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8045905 aaaactatgcaattaggtcaa-tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 8045822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 300
Target Start/End: Original strand, 11847886 - 11848179
Alignment:
Q  13 caacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatag 112  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||    
T  11847886 caacaacaattacagatcattccatcatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaag 11847985  T
Q  113 attaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa------t 206  Q
    ||||||||||||||||||||||||||||| || || ||||||||||| |||||||||| | |||||||||| |||||||||||||||||||||      |    
T  11847986 attaagttttcattctgaacattatattataaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgattt 11848085  T
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
    | || || ||||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11848086 taatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11848179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 101 - 290
Target Start/End: Original strand, 53483573 - 53483760
Alignment:
Q  101 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 200  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||      
T  53483573 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaatt 53483670  T
Q  201 ctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
     ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  53483671 ttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 15408139 - 15408231
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| | ||||||| |||| ||||| | ||||||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaaagattgcacagaaaaatcggttccta 15408231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 290
Target Start/End: Original strand, 27906130 - 27906321
Alignment:
Q  100 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 199  Q
    |||||||  ||||||||||   |||| | |||||| | ||||||||| | | ||||||||| |||| | ||| | |||| ||||| ||||| |||||||     
T  27906130 agcaacattatagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaat 27906229  T
Q  200 cctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
     |||||||| |||||| | |||||| | ||||  | ||||||||||||||||| |||||||| || || ||||| || |||||||| |||||    
T  27906230 tctcaattttatcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaagataatcccacccttatcttag 27906321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 14486632 - 14486713
Alignment:
Q  206 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 287  Q
    ||||||||| | ||| || ||||| | | ||||||||||||||||| |||||||| || ||  |||||||||||||||||||    
T  14486632 tttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||||||||||||||| |||| ||| || ||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcaccctta 284  Q
    |||||||||||||||| || | ||| ||||| ||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 326
Target Start/End: Complemental strand, 43284059 - 43284008
Alignment:
Q  275 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    |||||||||||||||| ||||||||| |||| ||||||  ||||||||||||    
T  43284059 ctcacccttaccttagatttgcagaaagattgcacagcgaaatcggttccta 43284008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  254 ttatgattatcgagagatagtctcacccttaccttagttttg 295  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||||||||||||||| |||| ||| || ||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 56 - 289
Target Start/End: Original strand, 23057760 - 23057993
Alignment:
Q  56 caattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaaca 155  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23057760 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 23057859  T
Q  156 tgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatt 255  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23057860 tgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcaggaattatagatt 23057959  T
Q  256 atgattatcgagagatagtctcacccttacctta 289  Q
    ||||||||||||||||||||||||||||||||||    
T  23057960 atgattatcgagagatagtctcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 7 - 300
Target Start/End: Complemental strand, 29614429 - 29614136
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| |||||||| |||||| | |||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| |||||||||||||||||    
T  29614429 catcaacaacaacacttacagattattccaccatcatacacaaattcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaaca 29614330  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
    ||| |||||||||||||||||| ||||||  | ||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  29614329 acaaagattaagttttcattctaaacatt-caatacaagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaat 29614231  T
Q  207 tta-tcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
    ||| | |||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29614230 ttatttttccaaaattatgcaactaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 29614136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 15 - 289
Target Start/End: Original strand, 23838980 - 23839253
Alignment:
Q  15 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 114  Q
    ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  23838980 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 23839078  T
Q  115 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 214  Q
    |||||||||||||||||||||| |||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  23839079 taagttttcattctgaacattacattacaacagaattaacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaatttatcttc 23839177  T
Q  215 caaa-actatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23839178 caaacactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 29 - 326
Target Start/End: Original strand, 18800233 - 18800529
Alignment:
Q  29 tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattct 128  Q
    |||||||||||||||||  || |||||||||||||||||||  | ||| || ||||||||||| |||||||| |||||| |||||||||| ||||||| |    
T  18800233 tcattccaccatcataccaaacttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacaacaacaatatagattaagatttcatttt 18800331  T
Q  129 gaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaa 227  Q
    |||||| | |||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  18800332 gaacatcacattacaacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaa 18800430  T
Q  228 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||    
T  18800431 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacattagttttgcagaaggattacacagcaaaatcggttccta 18800529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 14 - 300
Target Start/End: Complemental strand, 10986455 - 10986170
Alignment:
Q  14 aacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacataga 113  Q
    |||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  || ||||| |||||||||||||||||||| |||||  |||||    
T  10986455 aacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcgtaatt-tcaatcaatttatgatcacaacaacagtataga 10986357  T
Q  114 ttaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt 213  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  10986356 ttaagttttcattctgaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttatctt 10986258  T
Q  214 cc-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
    || ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||  ||||||||    
T  10986257 ccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgcagaa 10986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 7 - 289
Target Start/End: Original strand, 4477631 - 4477912
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||| ||||| ||| |||||||||||||| |  || ||||| ||||||||||  |||||||| |||||||||||||||||||| |||||    
T  4477631 catcaacaacaacaaatacagatcactccaccatcatacaaatctttatcaaatcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 4477729  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
    | |||||||||||||||||||| ||||||| ||||||||||||||| |||||| | |||||||| |||| ||||||||||||||||||||||||| ||||    
T  4477730 atatagattaagttttcattctaaacattacattacaacagaattagcatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaat 4477828  T
Q  207 ttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4477829 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 21565494 - 21565214
Alignment:
Q  5 gacatcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaa 104  Q
    ||||||| |||||||||| |||| |||||||||||||||||| || |||||||||||||||||||  | ||| || ||||||||||||||||||||||||    
T  21565494 gacatcaacaacaacaat-acagatcattccaccatcatacagaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaa 21565397  T
Q  105 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 204  Q
    ||  |||||||||| |||||||| |||| | | ||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  21565396 cagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctca 21565298  T
Q  205 a-tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacct 287  Q
    | |||||| | |||   || |||||||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  21565297 attttatcct-caaggttaagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 155 - 300
Target Start/End: Complemental strand, 930229 - 930085
Alignment:
Q  155 atgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagat 254  Q
    ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||||||    
T  930229 atgatcattacccatt-cccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagat 930131  T
Q  255 tatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  930130 tatgattattgagagatagtctcacccttaccttagttttgcagaa 930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 7 - 300
Target Start/End: Original strand, 12168138 - 12168428
Alignment:
Q  7 catcatcaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 104  Q
    ||||| |||||||||||| ||  |||||||||||||| |||  | ||||||||||||| ||||   ||  || | |||||||||| ||| || |||||||    
T  12168138 catcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaattcatccaaaat-tcaatcaattcatggattacagcaa 12168236  T
Q  105 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 204  Q
    |||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||||||||||||||||||||||  |||    
T  12168237 caacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttca 12168333  T
Q  205 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
      |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12168334 tcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 12168428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 7 - 300
Target Start/End: Original strand, 19287047 - 19287337
Alignment:
Q  7 catcatcaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 104  Q
    ||||| |||||||||||| ||  |||||||||||||| |||  | ||||||||||||| ||||   ||  || | |||||||||| ||| || |||||||    
T  19287047 catcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaattcatccaaaat-tcaatcaattcatggattacagcaa 19287145  T
Q  105 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 204  Q
    |||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||||||||||||||||||||||  |||    
T  19287146 caacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttca 19287242  T
Q  205 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
      |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19287243 tcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 19287337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 7 - 300
Target Start/End: Complemental strand, 19786149 - 19785859
Alignment:
Q  7 catcatcaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 104  Q
    ||||| |||||||||||| ||  |||||||||||||| |||  | ||||||||||||| ||||   ||  || | |||||||||| ||| || |||||||    
T  19786149 catcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaattcatccaaaat-tcaatcaattcatggattacagcaa 19786051  T
Q  105 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 204  Q
    |||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||||||||||||||||||||||  |||    
T  19786050 caacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttca 19785954  T
Q  205 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
     ||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19785953 ttttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 19785859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 7 - 300
Target Start/End: Original strand, 19878231 - 19878521
Alignment:
Q  7 catcatcaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 104  Q
    ||||| |||||||||||| ||  |||||||||||||| |||  | ||||||||||||| ||||   ||  || | |||||||||| ||| || |||||||    
T  19878231 catcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaattcatccaaaat-tcaatcaattcatggattacagcaa 19878329  T
Q  105 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 204  Q
    |||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||||||||||||||||||||||  |||    
T  19878330 caacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttca 19878426  T
Q  205 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
      |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19878427 tcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 19878521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 7 - 300
Target Start/End: Original strand, 19884007 - 19884297
Alignment:
Q  7 catcatcaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 104  Q
    ||||| |||||||||||| ||  |||||||||||||| |||  | ||||||||||||| ||||   ||  || | |||||||||| ||| || |||||||    
T  19884007 catcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaattcatccaaaat-tcaatcaattcatggattacagcaa 19884105  T
Q  105 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 204  Q
    |||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||||||||||||||||||||||  |||    
T  19884106 caacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttca 19884202  T
Q  205 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
      |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  19884203 tcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcaccctaaccttagttttgcagaa 19884297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 101 - 290
Target Start/End: Complemental strand, 34640173 - 34639986
Alignment:
Q  101 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 200  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||| ||||||||||||||||      
T  34640173 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34640076  T
Q  201 ctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
     ||   |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34640075 ttcttattattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 101 - 290
Target Start/End: Complemental strand, 34646847 - 34646660
Alignment:
Q  101 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 200  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||| ||||||||||||||||      
T  34646847 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34646750  T
Q  201 ctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
     ||   |||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34646749 ttcttattattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 24512899 - 24512807
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||| ||||||| ||||||||| |||| ||||||| ||||||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaaagattgcacagcaaaatcggttccta 24512807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 176 - 290
Target Start/End: Complemental strand, 25469816 - 25469704
Alignment:
Q  176 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 275  Q
    ||||||| |||||||||||||||   |||  |||| ||||||||| || ||||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  25469816 tcagaattatcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtc 25469719  T
Q  276 tcacccttaccttag 290  Q
    |||||||||||||||    
T  25469718 tcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 289
Target Start/End: Original strand, 9187352 - 9187550
Alignment:
Q  93 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 192  Q
    |||||||| |||||  ||||||||||   |||||||||||| || ||||||||| | | ||||||||| ||||    |||| |||| ||||| ||||||     
T  9187352 tgatcacaacaacattatagattaagaaatcattctgaacactaaattacaacacattaaacatgattcttacatcattcctttcaaaatcagcatcaa- 9187450  T
Q  193 ccctaaccctcaattt--atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||  | ||||||  || ||| | ||| || ||||||| || ||||| ||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  9187451 ccctaattcccaatttttatattcaagaacaattcaattagatctatttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||| ||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 206 - 290
Target Start/End: Original strand, 31252394 - 31252478
Alignment:
Q  206 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || ||  | ||||| |||||||||||||||||    
T  31252394 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 287
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 287  Q
    |||||||||||||| |||| |||||||| || ||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 326
Target Start/End: Complemental strand, 933666 - 933615
Alignment:
Q  275 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    |||||||||||||||| ||||||||| |||| || |||| ||||||||||||    
T  933666 ctcacccttaccttagatttgcagaaagattgcatagcaaaatcggttccta 933615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 7 - 287
Target Start/End: Complemental strand, 8728015 - 8727735
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||    
T  8728015 catcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaaca 8727916  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
      |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| | ||| ||||||||||| |||||||||||||||||||    
T  8727915 gtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaataccca-tacccctcagaatcatcgtcaaaccctaaccctcaat 8727817  T
Q  207 ttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 287  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  8727816 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 7 - 290
Target Start/End: Original strand, 44477397 - 44477678
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  44477397 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 44477495  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
      |||||||||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||    
T  44477496 gtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaat 44477594  T
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44477595 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 7 - 290
Target Start/End: Original strand, 44492555 - 44492836
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  44492555 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 44492653  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
      |||||||||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||    
T  44492654 gtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaat 44492752  T
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44492753 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 16 - 300
Target Start/End: Original strand, 23866396 - 23866680
Alignment:
Q  16 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagat 114  Q
    ||||||| |||| | ||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||| |||| ||||| |||||||||| ||||    
T  23866396 caacaatcacagattattccaccatcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaaca-agat 23866494  T
Q  115 taagttttcattctgaacattatattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt 213  Q
    |||||||  |||||||||||||||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||    
T  23866495 taagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttatttt 23866594  T
Q  214 ccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23866595 ccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 23866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 15 - 326
Target Start/End: Complemental strand, 27941127 - 27940815
Alignment:
Q  15 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 114  Q
    ||||||| || || ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||| | |||||  ||||||    
T  27941127 acaacaaatatagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcataacaacagtatagat 27941029  T
Q  115 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat--ttatct 212  Q
    ||| |||||||||||||||||| |||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||  | ||||  |||| |    
T  27941028 taaattttcattctgaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaattcccaattcttattt 27940930  T
Q  213 tccaa-aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacag 311  Q
    | ||| ||| || | | |    |||||||||||||| ||| ||||| || || ||  | ||| |||||||||||||||||||||||||||||||||||||    
T  27940929 ttcaagaacaattctaatcaaacaattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacag 27940830  T
Q  312 cacaatcggttccta 326  Q
    |||||||||||||||    
T  27940829 cacaatcggttccta 27940815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 81 - 300
Target Start/End: Original strand, 17054440 - 17054656
Alignment:
Q  81 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 179  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  17054440 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 17054536  T
Q  180 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 279  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  17054537 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcac 17054635  T
Q  280 ccttaccttagttttgcagaa 300  Q
    ||||||||| |||||||||||    
T  17054636 ccttaccttggttttgcagaa 17054656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 289
Target Start/End: Original strand, 18614217 - 18614327
Alignment:
Q  180 aatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctca 278  Q
    ||||| ||| |||||||||  |||||||| |||||| | ||| || ||||| | ||||||||||||||||||| || |||||||| ||||||||||||||    
T  18614217 aatcagcataaaaccctaattctcaattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctca 18614316  T
Q  279 cccttacctta 289  Q
    |||||||||||    
T  18614317 cccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 14056619 - 14056527
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    |||||||||||| ||| | | ||| ||||| |||||||||||||||||||||||||| ||||||||| |||| |||| || ||||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaaagattgcacaacaaaatcggttccta 14056527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  225 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 322
Target Start/End: Original strand, 25111976 - 25112064
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggtt 322  Q
    |||||||||||| ||| | | ||| ||||| |||||||||||||||||||||||||| |||| |||| |||| |||| || ||||||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaaagattgcacaacaaaatcggtt 25112064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 30765925 - 30765873
Alignment:
Q  274 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  30765925 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 30765873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||||||||||| | ||||||||||| || ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 21325791 - 21325730
Alignment:
Q  265 gagagatagtctcacccttaccttagttttgcagaatg-attacacagcacaatcggttcct 325  Q
    ||||| ||| |||||||||||||||| ||||||||| | ||| ||||||| |||||||||||    
T  21325791 gagagttagcctcacccttaccttagatttgcagaaagaattgcacagcaaaatcggttcct 21325730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 21321192 - 21321132
Alignment:
Q  266 agagatagtctcacccttaccttagttttgcagaatg-attacacagcacaatcggttcct 325  Q
    |||| ||||||| |||||||||||| ||||||||| | ||| ||||||| |||||||||||    
T  21321192 agagttagtctcgcccttaccttagatttgcagaaagaattgcacagcaaaatcggttcct 21321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||||||||| ||||| ||||| || || ||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 7 - 289
Target Start/End: Complemental strand, 19661734 - 19661454
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  19661734 catcaacaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 19661636  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
    | |||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||    
T  19661635 atatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaat 19661537  T
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19661536 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 7 - 289
Target Start/End: Original strand, 6483492 - 6483772
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||| ||||| |||||||||||||||||| |  ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||    
T  6483492 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaaca 6483590  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
      |||||||||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||    
T  6483591 gtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaat 6483689  T
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6483690 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 7 - 289
Target Start/End: Original strand, 6486959 - 6487239
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||| ||||| |||||||||||||||||| |  ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||    
T  6486959 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaaca 6487057  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
      |||||||||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||    
T  6487058 gtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaat 6487156  T
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6487157 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 5 - 300
Target Start/End: Original strand, 26583600 - 26583892
Alignment:
Q  5 gacatcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaa 104  Q
    ||||||| |||||||||| |||| |||||||||||||||||| || |||| |||||||||||| |  |  |||||   | |||| || ||||||||||||    
T  26583600 gacatcaacaacaacaat-acagatcattccaccatcatacaaaatttcaccaattcatccaaccaattctaattacaattcaaattgtgatcacagcaa 26583698  T
Q  105 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 204  Q
    ||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||||| |||||| |||||||||||||||| ||||||||||||    
T  26583699 cattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattaccc-tttcccctcagaatcatcatcaagccctaaccctca 26583797  T
Q  205 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26583798 atttattttccaaaactatgcaattaggtcaa-tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 26583892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 23089337 - 23089057
Alignment:
Q  5 gacatcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaa 104  Q
    ||||||| |||||||||| |||| |||||||||||||||||| || |||||||||||||||||||  | ||| || ||||||||||||||||||||||||    
T  23089337 gacatcaacaacaacaat-acagatcattccaccatcatacagaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaa 23089240  T
Q  105 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 204  Q
    ||  |||||||||| |||||||| |||| | | ||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  23089239 cagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctca 23089141  T
Q  205 a-tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacct 287  Q
    | |||||| | |||   || |||||||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  23089140 attttatcct-caaggttaagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 23878781 - 23879060
Alignment:
Q  5 gacatcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaa 104  Q
    ||||||| |||||||||| |||| |||||||||||||||||| || |||||||||||||||||||  |  || || |||||||||||||||||||| |||    
T  23878781 gacatcaacaacaacaat-acagatcattccaccatcatacaaaacttcatcaattcatccaatcaattctattt-tcaatcaatttatgatcacaacaa 23878878  T
Q  105 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 204  Q
    ||  |||||||||| ||||||||||||||| | ||||||||| |||||||||||| |||||||  ||||| |||||||||||| | ||||||||||||||    
T  23878879 cagtatagattaagatttcattctgaacatcacattacaacataattaacatgatcattaccccattcccctcagaatcatcaac-aaccctaaccctca 23878977  T
Q  205 attt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 287  Q
    |||| ||| | |||   || |||||||||||||||||  ||||||||| || || ||||  |||||||||||||||||||||||    
T  23878978 atttaatcct-caaggttaagcaattaggtcaatttttcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 5 - 289
Target Start/End: Complemental strand, 23101745 - 23101463
Alignment:
Q  5 gacatcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaa 104  Q
    ||||||| |||||||||| || | |||||||||||||||||| || ||||| |||||||||||||  | ||| || |||||||||||||||||||| |||    
T  23101745 gacatcaacaacaacaat-actgatcattccaccatcatacagaacttcatgaattcatccaatcaattatattt-tcaatcaatttatgatcacaacaa 23101648  T
Q  105 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 204  Q
    ||  |||||||||| |||||||| |||| | | ||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||    
T  23101647 cagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctca 23101549  T
Q  205 a-tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacctta 289  Q
    | |||||| | |||   ||  ||||||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||||    
T  23101548 attttatcct-caaggttaaacaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 290
Target Start/End: Complemental strand, 5706137 - 5706023
Alignment:
Q  176 tcagaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagt 274  Q
    |||||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||  ||||||||||    
T  5706137 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattaatgagagatagt 5706039  T
Q  275 ctcacccttaccttag 290  Q
    ||||||||||||||||    
T  5706038 ctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 326
Target Start/End: Complemental strand, 6260186 - 6260135
Alignment:
Q  275 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6260186 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 6260135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  225 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  225 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 228 - 289
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  228 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 19665081 - 19665037
Alignment:
Q  282 ttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19665081 ttaccttagttttgcagaatgattacacagcacaatcggttccta 19665037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 300
Target Start/End: Complemental strand, 23168483 - 23168288
Alignment:
Q  109 atagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 208  Q
    ||||||||||   |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    
T  23168483 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23168384  T
Q  209 ----atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
        |||||| |||||||| | ||||| | |||||| ||||||||||| |||||||| |  || ||||| || ||||||||||||||  ||||||||    
T  23168383 ttttatcttc-aaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23168288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 300
Target Start/End: Complemental strand, 23579740 - 23579545
Alignment:
Q  109 atagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 208  Q
    ||||||||||   |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    
T  23579740 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23579641  T
Q  209 ----atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
        |||||| |||||||| | ||||| | |||||| ||||||||||| |||||||| |  || ||||| || ||||||||||||||  ||||||||    
T  23579640 ttttatcttc-aaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23579545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 26885166 - 26885246
Alignment:
Q  218 aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 299  Q
    |||||| | ||||| | ||||||||||||||||| |||| |||||| || ||||| || ||||||||||||||  |||||||    
T  26885166 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 7 - 287
Target Start/End: Complemental strand, 14678 - 14398
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||| ||||| |||||||||||||||||  | ||||||||||| ||||||||  ||||| || ||||||| ||||||||||||||||||    
T  14678 catcaacaacaacaaatacagatcattccaccatcataccaatattcatcaatttatccaatcaatcatattt-tcaatcagtttatgatcacagcaaca 14580  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
     |||||||||||||||||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14579 gcatagattaagttttcattcggaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 14480  T
Q  207 ttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 287  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14479 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 300
Target Start/End: Complemental strand, 1027 - 740
Alignment:
Q  13 caacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatag 112  Q
    |||||||||| |||  || |||||||||||||||||||||||||||||||||||||| ||||||| | ||||||| |||||||||||| |||||||| ||    
T  1027 caacaacaatcacaaatctttccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaaca-ag 929  T
Q  113 attaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatct 212  Q
    |||||||||| || |||||||||||||||||| || |||| |||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |    
T  928 attaagtttttatcctgaacattatattacaagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattt 829  T
Q  213 tccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  828 tccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 7 - 300
Target Start/End: Original strand, 111674 - 111948
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||                    ||||||||||||||||||||||| ||    
T  111674 catcaacaacaacaattacagatcattccaccatcatacacaaattcatcaatt--------------------tcaatcaatttatgatcacagcagca 111753  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  111754 acaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 111853  T
Q  207 ttatcttccaaaactatgcaattaggtcaa-ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  111854 ttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 111948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 7 - 289
Target Start/End: Complemental strand, 20437305 - 20437024
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  20437305 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 20437207  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
      |||||||||||||||||||||||||||| ||||||||| |||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||    
T  20437206 gtatagattaagttttcattctgaacattacattacaacataattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaat 20437108  T
Q  207 ttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20437107 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 81 - 300
Target Start/End: Original strand, 41111884 - 41112100
Alignment:
Q  81 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 179  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||   |  |||| ||||  || ||||    
T  41111884 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacaccgtctttactcatt--ccatcag 41111980  T
Q  180 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 279  Q
    ||||||||||||||||||||  |||  |||| || ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41111981 aatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41112079  T
Q  280 ccttaccttagttttgcagaa 300  Q
    |||||||||||||||||||||    
T  41112080 ccttaccttagttttgcagaa 41112100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 32651563 - 32651627
Alignment:
Q  225 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  225 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||| ||||||||||||||||||| | ||||||||| ||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 287
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 287  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 7 - 326
Target Start/End: Original strand, 11116 - 11433
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| |||||||||| |||| ||| |||||||||||||| || |||||||||||||||||||  | ||| || ||||||||||| ||||||||||||||    
T  11116 catcaacaacaacaat-acagatcaatccaccatcatacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacagcaaca 11213  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
      || ||||||| ||||||| ||||||| | |||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||    
T  11214 gtatggattaagatttcattttgaacatcacattacaacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaat 11312  T
Q  207 t-tatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgatt 305  Q
    | ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  11313 tctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggatt 11412  T
Q  306 acacagcacaatcggttccta 326  Q
    |||||||| ||||||||||||    
T  11413 acacagcaaaatcggttccta 11433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 181; Significance: 9e-98; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 7 - 290
Target Start/End: Complemental strand, 10477 - 10195
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  10477 catcaacaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 10379  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
      |||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||    
T  10378 gtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaat 10280  T
Q  207 ttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  10279 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 181; Significance: 9e-98; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 7 - 290
Target Start/End: Complemental strand, 1807 - 1525
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  1807 catcaacaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 1709  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
      |||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||    
T  1708 gtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaat 1610  T
Q  207 ttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  1609 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 176; Significance: 9e-95; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 7 - 300
Target Start/End: Complemental strand, 2179 - 1887
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| |||||||| |||||| | ||||||||||| ||||||||||||||||||||| ||||| ||||| | | |||||||| |||||||||||||||||    
T  2179 catcaacaacaacatttacagattattccaccatcgtacacaaattcatcaattcatacaatcactcatcaatttcaatcaagttatgatcacagcaaca 2080  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
    |||  ||||||||||||||| ||||||||| ||||||| ||||||||||| || ||||||||||  || ||| ||||||||||||||||||||||||||     
T  2079 acaaggattaagttttcattatgaacattaaattacaagagaattaacataatcattacccatt--ccatcaaaatcatcatcaaaccctaaccctcaaa 1982  T
Q  207 ttatcttccaaaactatgcaattaggtcaa-ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  1981 ttattttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 7 - 300
Target Start/End: Complemental strand, 8856 - 8564
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| |||||||| |||||| | ||||||||||| ||||||||||||||||||||| ||||| || || | | |||||||| |||||||||||||||||    
T  8856 catcaacaacaacatttacagattattccaccatcgtacacaaattcatcaattcatacaatcacttatcaatttcaatcaagttatgatcacagcaaca 8757  T
Q  107 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 206  Q
    |||  ||||||||||||||| ||||||||| ||||||| ||||||||||| || ||||||||||  || ||| ||||||||||||||||||||||||||     
T  8756 acaaggattaagttttcattttgaacattaaattacaagagaattaacataatcattacccatt--ccatcataatcatcatcaaaccctaaccctcaaa 8659  T
Q  207 ttatcttccaaaactatgcaattaggtcaa-ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  8658 ttattttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 176; Significance: 9e-95; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 13 - 326
Target Start/End: Original strand, 17948 - 18261
Alignment:
Q  13 caacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatag 112  Q
    ||||||||||||||| ||||  |||||||||||| | ||||||||||| ||||||||  ||  |||| |||||||||| |||||||||||||||||||||    
T  17948 caacaacaattacagatcatcacaccatcatacaaatattcatcaatttatccaatcaatccaaatt-tcaatcaattcatgatcacagcaacaacatag 18046  T
Q  113 attaagttttcattctgaacattatattacaa-cagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatc 211  Q
     |||||||||||||||| |||| | ||||||| ||||||||||||||  |||||| ||||||| | ||||||||||| ||||| |||||||||||||||     
T  18047 gttaagttttcattctggacatcacattacaaacagaattaacatgaccattacc-atttcccgttagaatcatcattaaaccttaaccctcaatttatt 18145  T
Q  212 ttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacaca 310  Q
    |||| ||| ||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18146 ttcctaaagctaagcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacaca 18245  T
Q  311 gcacaatcggttccta 326  Q
     |||||||||||||||    
T  18246 acacaatcggttccta 18261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 16 - 300
Target Start/End: Original strand, 75 - 356
Alignment:
Q  16 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagatt 115  Q
    |||||| ||||| ||| |||||||| |||||   ||||||||||| |||||| |  |||||||| |||| ||||||||||||||| ||| ||||||||||    
T  75 caacaaatacagatcactccaccattatacaattattcatcaatttatccaaccaatcataatt-tcaaccaatttatgatcacatcaataacatagatt 173  T
Q  116 aagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc 215  Q
    |||| |||| ||||||||  ||| ||||| | |||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  174 aagtcttcaatctgaacaccataatacaagaaaattaacatgatcattacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttcc 272  T
Q  216 aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  273 aaaactatgcaattaggtcaa-tttcagaaattatagattatggttattgagagatagtctcacccttaccttagttttgcagaa 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 93 - 326
Target Start/End: Original strand, 30715 - 30949
Alignment:
Q  93 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 192  Q
    |||||||| |||||  |||||||| |  ||||||||| |||| |  |||||||| | ||||||||||  |||| |  ||||| ||| |||||||||||||    
T  30715 tgatcacatcaacattatagattaggaattcattctgcacatcactttacaacatatttaacatgatcgttacaccattcccctcaaaatcatcatcaaa 30814  T
Q  193 ccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagt 291  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30815 ccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagt 30914  T
Q  292 tttgcagaatgattacacagcacaatcggttccta 326  Q
    ||||||||| |||||||||||| ||||| ||||||    
T  30915 tttgcagaaggattacacagcaaaatcgattccta 30949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 3576 - 3295
Alignment:
Q  5 gacatcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaa 104  Q
    ||||||| |||||||||| |||| |||||||||||||||||| || |||||||||||||||||||  | ||| || ||||||||||| ||||||||||||    
T  3576 gacatcaacaacaacaat-acagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacagcaa 3479  T
Q  105 caacatagattaagttttcattctgaacattatattacaacagaattaacatgatt-attacccatttcccttcagaatcatcatcaaaccctaaccctc 203  Q
    ||  |||||||||| ||||||||||||||| | ||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  3478 cagtatagattaagatttcattctgaacatcacattacaacaaaattaacatgattcattaccca-ttcccctcagaatcatcatcaaaccctaaccctc 3380  T
Q  204 aa-tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacct 287  Q
    || ||||||  ||||   || |||||||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  3379 aattttatc-cccaaggttaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 3904 - 3624
Alignment:
Q  5 gacatcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaa 104  Q
    ||||||| |||||||||| |||  |||||||||||||||||| || |||||||||||||||||||  | ||| || |||||||||||||||||||| |||    
T  3904 gacatcaacaacaacaat-acaaatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacaacaa 3807  T
Q  105 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 204  Q
    ||  |||||||||| |||||||| |||||| | ||||||||| |||||||||||| |||||||| | ||| |||||||||||||||||||||||||||||    
T  3806 cagtatagattaagatttcattccgaacatcacattacaacataattaacatgatcattaccca-tccccctcagaatcatcatcaaaccctaaccctca 3708  T
Q  205 a-tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacct 287  Q
    | |||||| | |||   || |||||||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  3707 attttatcct-caaggttaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 3435 - 3558
Alignment:
Q  7 catcatcaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 106  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||    
T  3435 catcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaaca 3534  T
Q  107 acatagattaagttttcattctga 130  Q
    ||| ||||||||||||||||||||    
T  3535 acaaagattaagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 7 - 295
Target Start/End: Complemental strand, 2013 - 1727
Alignment:
Q  7 catcatcaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 104  Q
    ||||| |||||||||||||||  |||||| |||||||| |  | |||||||||||||| ||||   ||| || | ||||||| || ||| ||  ||||||    
T  2013 catcaacaacaacaattacagaatcattctaccatcatcccaatattcatcaattcatacaattcatcacaaat-tcaatcagttaatggattgcagcaa 1915  T
Q  105 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 204  Q
    || ||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || ||||||||||||||||||||||||  |||    
T  1914 cagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaactttca 1817  T
Q  205 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 295  Q
      |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1816 tattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 99 - 295
Target Start/End: Complemental strand, 5943 - 5750
Alignment:
Q  99 cagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 198  Q
    |||||||| ||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  5943 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 5846  T
Q  199 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 295  Q
    |  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5845 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 904 - 991
Alignment:
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 294  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 8049 - 8136
Alignment:
Q  207 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 294  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 50 - 146
Target Start/End: Original strand, 806 - 901
Alignment:
Q  50 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaaca 146  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  806 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 50 - 146
Target Start/End: Original strand, 7951 - 8046
Alignment:
Q  50 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaaca 146  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  7951 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 8046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 40587 - 40495
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttccta 40495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 296
Target Start/End: Complemental strand, 45386 - 45268
Alignment:
Q  178 agaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtct 276  Q
    |||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtct 45288  T
Q  277 cacccttaccttagttttgc 296  Q
    |||||||||||||| |||||    
T  45287 cacccttaccttagatttgc 45268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 234 - 323
Target Start/End: Original strand, 135473 - 135562
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttc 323  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||| ||||| |||| ||||||| |||||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaaagattgcacagcaaaatcggttc 135562  T

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Target: scaffold0235 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 236 - 326
Target Start/End: Complemental strand, 22646 - 22556
Alignment:
Q  236 attttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    |||||||||||||||| | ||||||||| |||||||||||||||||||||||| | |||||||||  ||| ||||||| ||||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaaatattgcacagcaaaatcggttccta 22556  T

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Target: scaffold0310 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 17643 - 17723
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag-ttttgcagaatgattacacagca 313  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaaagattgcacagca 17723  T

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Target: scaffold0222 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  225 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

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Target: scaffold0004 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 116887 - 116951
Alignment:
Q  225 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

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Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

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Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  225 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

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Target: scaffold0249 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 2256 - 2212
Alignment:
Q  282 ttaccttagttttgcagaatgattacacagcacaatcggttccta 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  2256 ttaccttagttttgcagaatgattacacagcacaatcggttccta 2212  T

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Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  225 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

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Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  225 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||| ||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

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Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 1453 - 1515
Alignment:
Q  238 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 300  Q
    |||||||||||||| |||| ||| || ||||| ||||||||||||||||||| ||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaa 1515  T

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Target: scaffold0261 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 300
Target Start/End: Complemental strand, 23760 - 23559
Alignment:
Q  100 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 199  Q
    |||||||  ||||||||||   |||| |||||||| | ||||||||| | | ||||||||| ||||   ||| | |||| ||||| ||||| |||||||     
T  23760 agcaacattatagattaagaaatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaat 23661  T
Q  200 cctcaattta-tcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcag 298  Q
     ||||||||  ||||| | |||||| |  |||| | ||||||||||||||||| |||||||| ||  | ||||| || ||||||||||||||  ||||||    
T  23660 tctcaattttgtcttcaagaactattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcag 23561  T
Q  299 aa 300  Q
    ||    
T  23560 aa 23559  T

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Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 300
Target Start/End: Original strand, 680 - 780
Alignment:
Q  201 ctcaatttatcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 299  Q
    |||||||||| ||| | |||||| |  |||||| |||||| ||||||||||| |||| ||| || || ||||| || |||||||||||||||||||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcaga 779  T
Q  300 a 300  Q
    |    
T  780 a 780  T

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Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 206 - 290
Target Start/End: Complemental strand, 5941 - 5857
Alignment:
Q  206 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || || || ||||| || ||||||||||||||    
T  5941 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

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Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 289
Target Start/End: Original strand, 1321 - 1441
Alignment:
Q  170 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgaga 268  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| || || |    
T  1321 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 1420  T
Q  269 gatagtctcacccttacctta 289  Q
    |||||||||||||||||||||    
T  1421 gatagtctcacccttacctta 1441  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  234 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 301
Target Start/End: Original strand, 5487 - 5520
Alignment:
Q  268 agatagtctcacccttaccttagttttgcagaat 301  Q
    ||||||||||||||||||||||||||||||||||    
T  5487 agatagtctcacccttaccttagttttgcagaat 5520  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 493099 - 493019
Alignment:
Q  218 aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 299  Q
    |||||| | ||||| | ||||||||||||||||| |||| |||||| || ||||| |||||||||||||||||  |||||||    
T  493099 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

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Target: scaffold0348 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 14668 - 14620
Alignment:
Q  275 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttc 323  Q
    |||||||||||||||| ||||||||| |||| ||||||| |||||||||    
T  14668 ctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttc 14620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttt 293  Q
    ||||||||| ||||||||| |||||||| || ||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 287
Target Start/End: Original strand, 73149 - 73337
Alignment:
Q  100 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 199  Q
    |||||||  ||||||||||   |||| | |||||| | ||||||||| | | ||||||||| |||| |  || | |||| ||||| ||||| |||||||     
T  73149 agcaacattatagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaat 73248  T
Q  200 cctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 287  Q
     |||||||| |||||| | | |||| | ||||| | |||||||| |||||||| |||||||| || || ||||| || |||||||||||    
T  73249 tctcaattttatcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||| | ||||||||||| |  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||||||||||| ||||||| ||| || ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  235 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 290
Target Start/End: Complemental strand, 10634 - 10550
Alignment:
Q  206 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 290  Q
    ||||||||| | |||||| | ||||| | ||||||||||||||||| |||| ||| || || ||||| || ||| ||||||||||    
T  10634 tttatcttcaagaactattctattagattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttag 10550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  233 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 289  Q
    ||||||||||||| ||||| ||||| || || ||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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