View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16806_low_13 (Length: 219)
Name: NF16806_low_13
Description: NF16806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16806_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 5923350 - 5923492
Alignment:
| Q |
64 |
tccaataattacatttacgaatcgattctgctaatcccaattcgcttcaccaaagcattcctaattccatcctcagctttttgaaaacacatcccattct |
163 |
Q |
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| T |
5923350 |
tccaataattacatttacgaatcgattctgctaatcccaattcgcttcaccaaagcattcctaattccatcctcagctttttgaaaacacatcccattct |
5923449 |
T |
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| Q |
164 |
gttgctccaatcccgccatgtaacttctcacctctgttctaat |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5923450 |
gttgctccaatcccgccatgtaacttctcacctctgttctaat |
5923492 |
T |
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