View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16806_low_3 (Length: 415)

Name: NF16806_low_3
Description: NF16806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16806_low_3
NF16806_low_3
[»] chr4 (52 HSPs)
chr4 (11-178)||(9096225-9096392)
chr4 (176-304)||(20075525-20075653)
chr4 (176-304)||(36945181-36945309)
chr4 (176-304)||(198999-199127)
chr4 (179-304)||(25369786-25369911)
chr4 (184-304)||(388761-388881)
chr4 (184-304)||(12639973-12640093)
chr4 (184-304)||(31876796-31876916)
chr4 (176-304)||(52597490-52597618)
chr4 (184-304)||(52597669-52597789)
chr4 (176-304)||(55816408-55816536)
chr4 (176-304)||(389363-389491)
chr4 (184-304)||(37567432-37567552)
chr4 (176-304)||(48782032-48782160)
chr4 (184-303)||(32291023-32291142)
chr4 (176-303)||(40848089-40848216)
chr4 (175-300)||(12640548-12640673)
chr4 (187-304)||(25370350-25370467)
chr4 (175-304)||(35427245-35427373)
chr4 (184-304)||(2713801-2713921)
chr4 (184-300)||(20422693-20422809)
chr4 (184-304)||(26424362-26424482)
chr4 (176-304)||(20422131-20422256)
chr4 (171-304)||(40345088-40345221)
chr4 (184-301)||(48091056-48091173)
chr4 (176-304)||(32902423-32902551)
chr4 (176-304)||(36111175-36111302)
chr4 (184-304)||(55815833-55815953)
chr4 (178-304)||(28223565-28223691)
chr4 (184-304)||(32901859-32901979)
chr4 (184-304)||(36944618-36944738)
chr4 (184-300)||(29809049-29809165)
chr4 (184-304)||(33569728-33569848)
chr4 (174-300)||(31877394-31877521)
chr4 (176-303)||(3708779-3708900)
chr4 (219-304)||(20076144-20076229)
chr4 (184-272)||(199216-199304)
chr4 (184-304)||(40344511-40344631)
chr4 (220-304)||(48781526-48781610)
chr4 (184-303)||(6862655-6862774)
chr4 (193-304)||(31842681-31842791)
chr4 (341-402)||(9096175-9096236)
chr4 (214-303)||(37566941-37567030)
chr4 (176-304)||(26423759-26423876)
chr4 (184-270)||(40847685-40847771)
chr4 (175-261)||(48090465-48090551)
chr4 (262-304)||(35427840-35427882)
chr4 (184-250)||(47321767-47321833)
chr4 (176-226)||(52869447-52869497)
chr4 (176-225)||(3221424-3221473)
chr4 (176-209)||(52722125-52722158)
chr4 (312-340)||(40847677-40847705)
[»] chr2 (35 HSPs)
chr2 (173-304)||(28224346-28224477)
chr2 (184-304)||(16571126-16571246)
chr2 (179-304)||(10883290-10883415)
chr2 (176-304)||(3595246-3595374)
chr2 (184-304)||(3595853-3595973)
chr2 (176-304)||(7717243-7717370)
chr2 (180-304)||(11256120-11256244)
chr2 (184-304)||(20244129-20244249)
chr2 (176-303)||(6849288-6849415)
chr2 (179-304)||(39477283-39477408)
chr2 (184-304)||(8113258-8113378)
chr2 (184-304)||(9224274-9224394)
chr2 (176-304)||(16887583-16887711)
chr2 (187-304)||(11256698-11256815)
chr2 (184-304)||(4386918-4387038)
chr2 (176-304)||(7583132-7583260)
chr2 (184-304)||(8963512-8963632)
chr2 (184-304)||(28223796-28223916)
chr2 (184-304)||(7583751-7583871)
chr2 (171-304)||(8112675-8112805)
chr2 (176-303)||(17918021-17918148)
chr2 (184-296)||(7716679-7716791)
chr2 (176-304)||(16571684-16571812)
chr2 (184-304)||(33847881-33848001)
chr2 (187-300)||(6849504-6849617)
chr2 (187-304)||(16903048-16903164)
chr2 (195-304)||(39476534-39476643)
chr2 (212-304)||(20243589-20243681)
chr2 (212-301)||(467141-467230)
chr2 (227-304)||(17918643-17918720)
chr2 (184-304)||(30161941-30162061)
chr2 (184-282)||(40165881-40165979)
chr2 (176-304)||(40166807-40166929)
chr2 (176-303)||(467300-467429)
chr2 (176-243)||(4386355-4386422)
[»] chr5 (27 HSPs)
chr5 (175-304)||(26687499-26687628)
chr5 (175-304)||(26957230-26957359)
chr5 (184-304)||(28075927-28076047)
chr5 (184-306)||(4929462-4929584)
chr5 (184-304)||(3957508-3957628)
chr5 (184-299)||(5324366-5324481)
chr5 (176-304)||(4928871-4928999)
chr5 (176-300)||(21769994-21770122)
chr5 (176-300)||(3739625-3739749)
chr5 (180-304)||(3958092-3958216)
chr5 (184-304)||(8813641-8813761)
chr5 (184-304)||(33430051-33430170)
chr5 (214-304)||(3739038-3739128)
chr5 (214-304)||(42408523-42408613)
chr5 (227-304)||(26688014-26688092)
chr5 (227-304)||(26957745-26957823)
chr5 (215-304)||(13738099-13738187)
chr5 (215-303)||(42408031-42408119)
chr5 (255-304)||(8813134-8813183)
chr5 (176-240)||(5324304-5324368)
chr5 (177-234)||(8813078-8813135)
chr5 (241-279)||(12707058-12707096)
chr5 (176-226)||(39148768-39148818)
chr5 (312-341)||(33430042-33430071)
chr5 (185-225)||(25075034-25075074)
chr5 (185-225)||(25133003-25133043)
chr5 (236-304)||(33001992-33002060)
[»] chr8 (35 HSPs)
chr8 (176-304)||(30115954-30116082)
chr8 (176-304)||(44061985-44062113)
chr8 (176-304)||(11998456-11998584)
chr8 (184-304)||(33114146-33114266)
chr8 (184-304)||(7818482-7818602)
chr8 (176-304)||(43481239-43481367)
chr8 (176-304)||(43591007-43591135)
chr8 (184-303)||(35237267-35237386)
chr8 (175-304)||(39852761-39852890)
chr8 (184-304)||(11999038-11999158)
chr8 (176-304)||(16889786-16889913)
chr8 (192-304)||(44062554-44062666)
chr8 (175-299)||(7819060-7819184)
chr8 (184-304)||(16889203-16889323)
chr8 (176-304)||(38778753-38778881)
chr8 (184-304)||(39852162-39852282)
chr8 (184-300)||(43480624-43480740)
chr8 (186-304)||(33113585-33113703)
chr8 (212-304)||(2209042-2209134)
chr8 (181-293)||(16880487-16880599)
chr8 (184-304)||(40309458-40309578)
chr8 (176-300)||(36848163-36848283)
chr8 (194-304)||(38778172-38778282)
chr8 (176-304)||(40907599-40907723)
chr8 (195-304)||(30115386-30115495)
chr8 (184-304)||(10806395-10806515)
chr8 (184-304)||(43591574-43591694)
chr8 (214-304)||(4374259-4374349)
chr8 (215-304)||(10805987-10806076)
chr8 (184-304)||(16879896-16880016)
chr8 (176-299)||(4373686-4373809)
chr8 (184-304)||(4374950-4375070)
chr8 (178-261)||(35237865-35237947)
chr8 (176-208)||(37533331-37533363)
chr8 (236-304)||(5035196-5035264)
[»] chr7 (31 HSPs)
chr7 (176-303)||(19816264-19816391)
chr7 (174-304)||(24044001-24044131)
chr7 (177-304)||(36683422-36683549)
chr7 (174-300)||(47814597-47814723)
chr7 (176-304)||(34853391-34853519)
chr7 (184-304)||(4895040-4895160)
chr7 (184-304)||(36682843-36682963)
chr7 (176-304)||(22275425-22275552)
chr7 (176-304)||(42456474-42456602)
chr7 (190-304)||(47813985-47814099)
chr7 (184-300)||(19816854-19816970)
chr7 (184-304)||(34853954-34854074)
chr7 (184-304)||(42455929-42456049)
chr7 (176-304)||(46814405-46814533)
chr7 (192-304)||(4894515-4894627)
chr7 (187-303)||(22276035-22276151)
chr7 (184-304)||(27855574-27855693)
chr7 (184-304)||(46732575-46732695)
chr7 (180-304)||(30711792-30711916)
chr7 (214-304)||(32499287-32499377)
chr7 (176-304)||(24323940-24324067)
chr7 (184-304)||(33805977-33806097)
chr7 (176-304)||(36620698-36620820)
chr7 (212-304)||(46815020-46815112)
chr7 (217-304)||(32499831-32499917)
chr7 (218-303)||(18520899-18520984)
chr7 (184-304)||(36620126-36620246)
chr7 (227-303)||(46012899-46012975)
chr7 (240-299)||(27856106-27856165)
chr7 (176-226)||(84377-84427)
chr7 (176-208)||(27856184-27856216)
[»] chr3 (50 HSPs)
chr3 (175-304)||(31014336-31014465)
chr3 (176-304)||(23584237-23584365)
chr3 (176-304)||(23599060-23599188)
chr3 (175-304)||(25025722-25025851)
chr3 (184-304)||(3944903-3945023)
chr3 (176-304)||(41875574-41875702)
chr3 (176-304)||(44868576-44868704)
chr3 (176-304)||(55281835-55281963)
chr3 (175-304)||(8427701-8427830)
chr3 (176-304)||(29342341-29342469)
chr3 (184-304)||(50687666-50687786)
chr3 (184-304)||(23584841-23584961)
chr3 (184-304)||(23599664-23599784)
chr3 (184-304)||(25025182-25025302)
chr3 (184-304)||(44868015-44868135)
chr3 (176-304)||(48218591-48218719)
chr3 (184-304)||(50675083-50675203)
chr3 (187-304)||(48219193-48219310)
chr3 (176-300)||(24220579-24220703)
chr3 (176-304)||(19555881-19556012)
chr3 (187-304)||(32672177-32672294)
chr3 (184-304)||(42356241-42356364)
chr3 (184-304)||(31014882-31015002)
chr3 (184-304)||(37374828-37374943)
chr3 (176-304)||(37375426-37375554)
chr3 (212-304)||(49752868-49752960)
chr3 (187-304)||(37373976-37374093)
chr3 (176-304)||(49752265-49752401)
chr3 (176-304)||(37374564-37374692)
chr3 (212-304)||(47737631-47737723)
chr3 (214-304)||(29342951-29343041)
chr3 (184-300)||(19555278-19555394)
chr3 (214-304)||(38575600-38575690)
chr3 (214-303)||(38575059-38575148)
chr3 (214-303)||(43658854-43658943)
chr3 (228-300)||(40887903-40887975)
chr3 (221-304)||(32672741-32672824)
chr3 (177-304)||(50674630-50674752)
chr3 (174-304)||(47737062-47737191)
chr3 (184-293)||(55282390-55282498)
chr3 (229-304)||(8427269-8427344)
chr3 (218-304)||(24221130-24221216)
chr3 (212-302)||(43103935-43104025)
chr3 (228-304)||(42356767-42356843)
chr3 (176-250)||(41459130-41459203)
chr3 (176-250)||(43658255-43658328)
chr3 (244-304)||(3945467-3945527)
chr3 (176-225)||(38279409-38279458)
chr3 (176-225)||(46187033-46187082)
chr3 (184-220)||(49164694-49164730)
[»] chr6 (15 HSPs)
chr6 (177-304)||(5523201-5523328)
chr6 (176-304)||(6032158-6032286)
chr6 (176-304)||(30610711-30610839)
chr6 (184-304)||(5523804-5523924)
chr6 (176-304)||(12809069-12809197)
chr6 (184-304)||(13936598-13936718)
chr6 (184-304)||(30611303-30611423)
chr6 (184-304)||(33668229-33668349)
chr6 (184-304)||(6032711-6032831)
chr6 (184-304)||(12809660-12809780)
chr6 (189-304)||(31723846-31723961)
chr6 (180-304)||(13944294-13944418)
chr6 (176-304)||(33668789-33668916)
chr6 (184-304)||(33648121-33648241)
chr6 (217-304)||(31724406-31724494)
[»] chr1 (34 HSPs)
chr1 (175-297)||(52859753-52859875)
chr1 (176-304)||(43368793-43368921)
chr1 (176-300)||(1403650-1403773)
chr1 (184-304)||(6288162-6288282)
chr1 (176-304)||(8560701-8560828)
chr1 (176-304)||(27797117-27797245)
chr1 (184-304)||(27797694-27797814)
chr1 (176-304)||(42839701-42839828)
chr1 (180-304)||(49533747-49533871)
chr1 (176-304)||(7219606-7219733)
chr1 (184-304)||(27816962-27817082)
chr1 (184-304)||(42838945-42839065)
chr1 (184-304)||(49534354-49534474)
chr1 (184-303)||(1403048-1403167)
chr1 (184-303)||(8560164-8560283)
chr1 (176-303)||(41563179-41563306)
chr1 (190-304)||(42839506-42839620)
chr1 (178-299)||(48843582-48843703)
chr1 (176-304)||(42840271-42840399)
chr1 (175-304)||(51248441-51248570)
chr1 (189-304)||(43368203-43368318)
chr1 (214-304)||(48843920-48844010)
chr1 (214-304)||(51247866-51247956)
chr1 (216-304)||(7219048-7219136)
chr1 (221-304)||(41563750-41563833)
chr1 (218-304)||(48369524-48369610)
chr1 (228-304)||(6287672-6287748)
chr1 (184-300)||(7782653-7782769)
chr1 (185-304)||(27934253-27934371)
chr1 (220-300)||(37725423-37725503)
chr1 (216-304)||(52859189-52859277)
chr1 (227-260)||(37725672-37725705)
chr1 (312-340)||(1403040-1403068)
chr1 (176-208)||(48620377-48620409)
[»] scaffold0007 (1 HSPs)
scaffold0007 (184-304)||(11274-11393)
[»] scaffold1095 (1 HSPs)
scaffold1095 (176-300)||(1485-1609)
[»] scaffold0229 (2 HSPs)
scaffold0229 (184-303)||(15192-15311)
scaffold0229 (312-340)||(15291-15319)
[»] scaffold0368 (1 HSPs)
scaffold0368 (184-304)||(11743-11862)
[»] scaffold0041 (1 HSPs)
scaffold0041 (236-304)||(27281-27349)


Alignment Details
Target: chr4 (Bit Score: 115; Significance: 3e-58; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 11 - 178
Target Start/End: Complemental strand, 9096392 - 9096225
Alignment:
Q  11 gaaatgaacgaaacaaaagcagacatagctaagcctatgttnnnnnnncttaaaactaatccggtatttttgtcaaaagtaaataaccaaaaaataatat 110  Q
    ||||||||| ||||||||||||||||||||||| |||||||       ||||||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  9096392 gaaatgaaccaaacaaaagcagacatagctaagtctatgttaaaaaaacttaaaactaatctggtatttttgtcaaacataaatgaccaaaaaataatat 9096293  T
Q  111 tttgctttatattaacaaggaagtcgatgagccaaattagacaccattgtctataaaaagaagtgggt 178  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  9096292 tttgctttatattaacaaggaagttgaggagccaaattagacaccattgtctataaaaagaagtgggt 9096225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 20075525 - 20075653
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||    
T  20075525 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctc 20075624  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  20075625 aacactagatttttcttcacactatcttc 20075653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 36945309 - 36945181
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||||    
T  36945309 ggtgtgtgttcacatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctc 36945210  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  36945209 aacactagatttttcttcacactatcttc 36945181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 198999 - 199127
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||||  ||||||||||||||||||||||| || |||||||||||||||||||||    
T  198999 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttaaattcaatgattagattaagtgaagaacatattcttaacatgctctctc 199098  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  199099 aacactagatttttcttcacactatcttc 199127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 179 - 304
Target Start/End: Original strand, 25369786 - 25369911
Alignment:
Q  179 gtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaac 278  Q
    |||||||||||||||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  25369786 gtgtgttcacatgggaaaggttaatccttttccactatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaac 25369885  T
Q  279 actaaatttttcttcacactatcttc 304  Q
    |||| ||||||||||||| |||||||    
T  25369886 actagatttttcttcacaatatcttc 25369911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 388761 - 388881
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||     
T  388761 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaaaaacatatttttaacatgctctctcaacactag 388860  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  388861 atttttcttcacactatcttc 388881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 12639973 - 12640093
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  12639973 ttcacatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 12640072  T
Q  284 atttttcttcacactatcttc 304  Q
    ||||||||||||||| |||||    
T  12640073 atttttcttcacactgtcttc 12640093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 31876796 - 31876916
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||||||||  ||||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  31876796 ttcacatgggaaaggttaatccttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 31876895  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  31876896 atttttcttcacactatcttc 31876916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 52597490 - 52597618
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||||    
T  52597490 ggtgtgtgttcacatgggaaaggttaatcttttcccaccatgggaaagttagattcaatgattagattaagtgaagaacatattcttaacatgttctctc 52597589  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  52597590 aacactagatttttcttcacactatcttc 52597618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 52597789 - 52597669
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||     
T  52597789 ttcacatgggaaaggttaatcctttttcaccataggaaagttggattcaatgattagattaagtgaagaacatattcttaccatgctctctcaacactag 52597690  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  52597689 atttttcttcacactatcttc 52597669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 55816536 - 55816408
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||| ||    
T  55816536 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctttc 55816437  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  55816436 aacactagatttttcttcacactatcttc 55816408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 389491 - 389363
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   ||||||| |||||| |||||| ||||||||||||||||| || |||||||||||||| ||||||    
T  389491 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatggaaaagttggattcagtgattagattaagtgaagaacatattcttaacatgttctctc 389392  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  389391 aacactagatttttcttcacactatcttc 389363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 37567552 - 37567432
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||||||||| || || ||||||||||||||||||||||||||||     
T  37567552 ttcacatgggaaaggttaatacttttccaccatgggaaagttggattcaatgattagattaagtaaagaacatattcttaacatgctctctcaacactag 37567453  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  37567452 atttttcttcacactatcttc 37567432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 48782160 - 48782032
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||| |||||||||||||||||||||||| || ||||| |||||||| ||||||    
T  48782160 ggtgtgtgttcacatgggaaaggttaatcatttcgcaccatgggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgttctctc 48782061  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  48782060 aacactagatttttcttcacactatcttc 48782032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 184 - 303
Target Start/End: Original strand, 32291023 - 32291142
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||| |||  || |||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  32291023 ttcacatgggaaaggttaatcatttccaatcatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 32291122  T
Q  284 atttttcttcacactatctt 303  Q
    ||||||||||||||||||||    
T  32291123 atttttcttcacactatctt 32291142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 176 - 303
Target Start/End: Complemental strand, 40848216 - 40848089
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||| ||||||||||| ||| | || ||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||||    
T  40848216 ggtgtgtgttcacatggaaaaggttaatcatttctcactatgggaaagtttgattcaatgattagattaagtgaagaacatattcttaacatgttctctc 40848117  T
Q  276 aacactaaatttttcttcacactatctt 303  Q
    |||||| |||||||||||||||||||||    
T  40848116 aacactgaatttttcttcacactatctt 40848089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 175 - 300
Target Start/End: Complemental strand, 12640673 - 12640548
Alignment:
Q  175 gggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctct 274  Q
    ||||||||||||||||||||||| ||||||||||   |||||||||||||| |||||||||||||||||||| ||| || ||||| |||||||| |||||    
T  12640673 gggtgtgtgttcacatgggaaagcttaatcctttcccaccatgggaaagttggattcaatgattagattaagcgaagaacatatttttaacatgttctct 12640574  T
Q  275 caacactaaatttttcttcacactat 300  Q
    ||||||||||||||||||||||||||    
T  12640573 caacactaaatttttcttcacactat 12640548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 187 - 304
Target Start/End: Complemental strand, 25370467 - 25370350
Alignment:
Q  187 acatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatt 286  Q
    ||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||| |||| |||    
T  25370467 acatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaaaactagatt 25370368  T
Q  287 tttcttcacactatcttc 304  Q
    ||||||||||||||||||    
T  25370367 tttcttcacactatcttc 25370350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 175 - 304
Target Start/End: Original strand, 35427245 - 35427373
Alignment:
Q  175 gggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctct 274  Q
    |||||||||||||||||||||||||||||||||||   |||||||||| || |||||||||||||||||||||||| || |||||||||||||| |||||    
T  35427245 gggtgtgtgttcacatgggaaaggttaatccttttccgccatgggaaa-ttggattcaatgattagattaagtgaagaacatattcttaacatgttctct 35427343  T
Q  275 caacactaaatttttcttcacactatcttc 304  Q
     ||||||| |||||||||||||||||||||    
T  35427344 aaacactagatttttcttcacactatcttc 35427373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 2713921 - 2713801
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   ||||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||| ||     
T  2713921 ttcacatgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacattag 2713822  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  2713821 atttttcttcacactatcttc 2713801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 300
Target Start/End: Complemental strand, 20422809 - 20422693
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||| |||||||||||  ||||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  20422809 ttcacatgggaaagcttaatccttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 20422710  T
Q  284 atttttcttcacactat 300  Q
    |||||||||||||||||    
T  20422709 atttttcttcacactat 20422693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 26424482 - 26424362
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||| | |||||  |||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||||||     
T  26424482 ttcacatgggaaaggttagttcttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttcaacactag 26424383  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  26424382 atttttcttcacactatcttc 26424362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 20422131 - 20422256
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   |||||||||||| | ||||||||||||||||||||||   || |||||||||||||||||||||    
T  20422131 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaaggtagattcaatgattagattaagtg---aacatattcttaacatgctctctc 20422227  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||| ||||||||||    
T  20422228 aacactagatttttcttcgcactatcttc 20422256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 171 - 304
Target Start/End: Complemental strand, 40345221 - 40345088
Alignment:
Q  171 aagtgggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgct 270  Q
    |||| ||||||||||||||||||||||||||||| |||   || ||||||||||| |||||||||||||||||||||||| || ||||| |||| ||| |    
T  40345221 aagtaggtgtgtgttcacatgggaaaggttaatcttttcccacaatgggaaagttagattcaatgattagattaagtgaagaacatatttttaatatggt 40345122  T
Q  271 ctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||||| |||||||||||||||||||||    
T  40345121 ctctcaacactagatttttcttcacactatcttc 40345088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 48091173 - 48091056
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||| |||||||||||||||| |||   |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  48091173 ttcatatgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 48091074  T
Q  284 atttttcttcacactatc 301  Q
    ||||||||||||||||||    
T  48091073 atttttcttcacactatc 48091056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 32902551 - 32902423
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||| |||||||||||  |||   ||||||||||||||  ||||||||||||||||||||||| || |||||||||||||||||| ||    
T  32902551 ggtgtgtgttcacatgagaaaggttaatattttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgctctttc 32902452  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  32902451 aacactagatttttcttcacactatcttc 32902423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 36111302 - 36111175
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| || |||||||||||||||||||||||| || |||||||||||||  |||||     
T  36111302 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaa-ttggattcaatgattagattaagtgaagaacatattcttaacatattctcta 36111204  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  36111203 aacactagatttttcttcacactatcttc 36111175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 55815833 - 55815953
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   || ||||||||||| |||||||||||||||||||||||| || ||||||||| |||||||||| |||||||     
T  55815833 ttcacatgggaaaggttaatcctttcccactatgggaaagttggattcaatgattagattaagtgaagaacatattcttatcatgctctcttaacactag 55815932  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  55815933 atttttcttcacactatcttc 55815953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 178 - 304
Target Start/End: Original strand, 28223565 - 28223691
Alignment:
Q  178 tgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaa 277  Q
    ||||||||||||||||||||||||||| |||    | ||| ||||||| |||||||||||||||||||||||| || |||||||||||| ||||||||||    
T  28223565 tgtgtgttcacatgggaaaggttaatcttttccctctatgagaaagttggattcaatgattagattaagtgaagaacatattcttaacacgctctctcaa 28223664  T
Q  278 cactaaatttttcttcacactatcttc 304  Q
    ||||| |||||||||||||||||||||    
T  28223665 cactagatttttcttcacactatcttc 28223691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 32901859 - 32901979
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||| | | ||||||||  |||||||||||||| ||||||||||||||||||||| || || |||||||||||||||| |||||||||||     
T  32901859 ttcacatgggaaaagattatccttttccaccatgggaaagttggattcaatgattagattaagtaaagaacatattcttaacatgctttctcaacactag 32901958  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  32901959 atttttcttcacactatcttc 32901979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 36944618 - 36944738
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||| | |||||||||||| ||||  ||||||| |||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||||||     
T  36944618 ttcacacgtgaaaggttaatctttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttcaacactag 36944717  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  36944718 atttttcttcacactatcttc 36944738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 300
Target Start/End: Complemental strand, 29809165 - 29809049
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||| |||||||||||||||| ||| | | ||||||||||||  ||||||||||||||||||||||| || |||||||||||||||||| |||||||||     
T  29809165 ttcatatgggaaaggttaatcatttcttatcatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgctctttcaacactag 29809066  T
Q  284 atttttcttcacactat 300  Q
    |||||||||||||||||    
T  29809065 atttttcttcacactat 29809049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 33569728 - 33569848
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||| ||||||||   ||||||| |||||| |||||||| ||||||||||||||| || ||||||| |||||||||| |||||||||     
T  33569728 ttcacatgggaaaggtcaatcctttcccaccatggaaaagttggattcaataattagattaagtgaagaacatattctcaacatgctctttcaacactag 33569827  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  33569828 atttttcttcacactatcttc 33569848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 31877521 - 31877394
Alignment:
Q  174 tgggtgtgtgttcacatgggaaaggtt-aatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctct 272  Q
    ||||||||||||||||||| ||| ||| |||||||||| || ||||||||||| |||| ||||||||||||||||||| || ||||| |||||||| | |    
T  31877521 tgggtgtgtgttcacatggaaaaagtttaatcctttttcactatgggaaagttggatttaatgattagattaagtgaagaacatatttttaacatgttat 31877422  T
Q  273 ctcaacactaaatttttcttcacactat 300  Q
    |||||||||| |||||||||||||||||    
T  31877421 ctcaacactagatttttcttcacactat 31877394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 176 - 303
Target Start/End: Original strand, 3708779 - 3708900
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||||||||||||||||      |||||||||||||| ||||||||||||||||||||| || || ||| ||||| |||| ||||||    
T  3708779 ggtgtgtgttcacatgggaaaggttaatcc------accatgggaaagttggattcaatgattagattaagtaaagaacatactcttatcatgttctctc 3708872  T
Q  276 aacactaaatttttcttcacactatctt 303  Q
    | ||||| ||||||||||||||||||||    
T  3708873 agcactagatttttcttcacactatctt 3708900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 20076229 - 20076144
Alignment:
Q  219 gaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  20076229 gaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaactctagatttttcttcacactatcttc 20076144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 272
Target Start/End: Complemental strand, 199304 - 199216
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctct 272  Q
    |||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||    
T  199304 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctct 199216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 40344511 - 40344631
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||| ||||||||| |||||||||| | | |||| ||||||| |||| ||| ||||||||||||||| || |||||||||||||| ||||| |||||||     
T  40344511 ttcatatgggaaagtttaatcctttctcatcatgagaaagttggattaaattattagattaagtgaagaacatattcttaacatgttctcttaacactag 40344610  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  40344611 atttttcttcacactatcttc 40344631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 220 - 304
Target Start/End: Original strand, 48781526 - 48781610
Alignment:
Q  220 aaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  48781526 aaagttggattcaatgattagattaagtgatgaatatattcttaacatgctttttcaacactaaatttttcttcacactatcttc 48781610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 184 - 303
Target Start/End: Original strand, 6862655 - 6862774
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||| |||||||| |||| ||||  ||||| |||||||| ||||||| |||||||||||||||| || ||||||||||||||| || ||||||||||    
T  6862655 ttcacataggaaaggtcaatctttttctaccataggaaagttggattcaaagattagattaagtgaagaacatattcttaacatgcactttcaacactaa 6862754  T
Q  284 atttttcttcacactatctt 303  Q
    ||||||||| || |||||||    
T  6862755 atttttctttacgctatctt 6862774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 31842791 - 31842681
Alignment:
Q  193 gaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttctt 292  Q
    |||||||||||| |||  ||||||||||||||  |||||||||||||||||||||||| || ||||| |||||||| ||||||||||||  |||||||||    
T  31842791 gaaaggttaatcatttccaaccatgggaaagtg-gattcaatgattagattaagtgaagaacatattattaacatgttctctcaacactggatttttctt 31842693  T
Q  293 cacactatcttc 304  Q
    ||||||||||||    
T  31842692 cacactatcttc 31842681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 341 - 402
Target Start/End: Complemental strand, 9096236 - 9096175
Alignment:
Q  341 aaagaagtgggtcgatttaattatcaaggtttccatgttataatgtttttgtttccacatga 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9096236 aaagaagtgggtcgatttaattatcaaggtttccatgttataatgtttttgtttccacatga 9096175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 214 - 303
Target Start/End: Original strand, 37566941 - 37567030
Alignment:
Q  214 catgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatctt 303  Q
    |||| |||| || ||||||||||||| |||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37566941 catgagaaaattagattcaatgattaaattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatctt 37567030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 26423759 - 26423876
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   ||||||  |||||| |||||||||||||||||||||||| || ||||           ||||||    
T  26423759 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgaaaaagttggattcaatgattagattaagtgaagaacatat-----------tctctc 26423847  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  26423848 aacactagatttttcttcacactatcttc 26423876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 40847685 - 40847771
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgct 270  Q
    ||||||||| |||||||||||||||   |||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  40847685 ttcacatggaaaaggttaatcctttcccaccatgagaaagttggattcaatgattagattaagtgaagaacatattcttaacatgct 40847771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 261
Target Start/End: Original strand, 48090465 - 48090551
Alignment:
Q  175 gggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattct 261  Q
    ||||||||||||||||||||||||||||||| ||   |||||||||||||| |||||||||||||||||||||| | || |||||||    
T  48090465 gggtgtgtgttcacatgggaaaggttaatccattcccaccatgggaaagttggattcaatgattagattaagtgtagaacatattct 48090551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 304
Target Start/End: Complemental strand, 35427882 - 35427840
Alignment:
Q  262 taacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  35427882 taacatgctctctcaacactagatttttcttcacactatcttc 35427840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 47321767 - 47321833
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaa 250  Q
    |||| |||||||||||||||||||| | || |||| |||||| |||| |||||||||||||||||||    
T  47321767 ttcatatgggaaaggttaatcctttatcactatggaaaagttggatttaatgattagattaagtgaa 47321833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 52869447 - 52869497
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttc 226  Q
    |||||||||||||||||||||||| ||||||||   |||||||||||||||    
T  52869447 ggtgtgtgttcacatgggaaaggtgaatcctttcccaccatgggaaagttc 52869497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 3221473 - 3221424
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagtt 225  Q
    |||||||||||||||||||||||| ||||||||   || |||||||||||    
T  3221473 ggtgtgtgttcacatgggaaaggtgaatcctttcccacgatgggaaagtt 3221424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 52722158 - 52722125
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttt 209  Q
    ||||| ||||||||||||||||||||||||||||    
T  52722158 ggtgtttgttcacatgggaaaggttaatcctttt 52722125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 340
Target Start/End: Complemental strand, 40847705 - 40847677
Alignment:
Q  312 gattaaccttttccatgtgaaatgccacc 340  Q
    |||||||||||||||||||||||||||||    
T  40847705 gattaaccttttccatgtgaaatgccacc 40847677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 1e-51; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 173 - 304
Target Start/End: Complemental strand, 28224477 - 28224346
Alignment:
Q  173 gtgggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctct 272  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || |||||||||||||| |||    
T  28224477 gtgggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttct 28224378  T
Q  273 ctcaacactaaatttttcttcacactatcttc 304  Q
    ||||||||||||||||||||||||||||||||    
T  28224377 ctcaacactaaatttttcttcacactatcttc 28224346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 16571126 - 16571246
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  16571126 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaaaaacatattcttaacatgctctctcaacactag 16571225  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  16571226 atttttcttcacactatcttc 16571246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 179 - 304
Target Start/End: Original strand, 10883290 - 10883415
Alignment:
Q  179 gtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaac 278  Q
    ||||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||||| || || ||||||||||||||||||||||||    
T  10883290 gtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtaaagaacatattcttaacatgctctctcaac 10883389  T
Q  279 actaaatttttcttcacactatcttc 304  Q
    |||| |||||||||||||||||||||    
T  10883390 actagatttttcttcacactatcttc 10883415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 3595246 - 3595374
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||| ||||   |||||||||||||| |||||||||||||||| ||||||| || |||||||||||||||||||||    
T  3595246 ggtgtgtgttcacatgggaaaggttaattctttcccaccatgggaaagttggattcaatgattagataaagtgaagaacatattcttaacatgctctctc 3595345  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  3595346 aacactagatttttcttcacactatcttc 3595374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 3595973 - 3595853
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||| ||||||||||||| | ||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  3595973 ttcacatgggaaatgttaatcctttttcatcatggaaaagttggattcaatgattagattaagtgaaaaacatattcttaacatgctctctcaacactag 3595874  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  3595873 atttttcttcacactatcttc 3595853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 7717370 - 7717243
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||| |||||||||| || |||||||||||||| ||||||    
T  7717370 ggtgtgtgttcacatgggaaaggttaatcctttctcaccatgggaaagtt-gattcaatgattatattaagtgaagaacatattcttaacatgttctctc 7717272  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  7717271 aacactagatttttcttcacactatcttc 7717243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 180 - 304
Target Start/End: Original strand, 11256120 - 11256244
Alignment:
Q  180 tgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaaca 279  Q
    ||||||||||||||||||||||||| ||| | ||||||| |||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  11256120 tgtgttcacatgggaaaggttaatcatttctcaccatggtaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaaca 11256219  T
Q  280 ctaaatttttcttcacactatcttc 304  Q
    ||| |||||||||||||||||||||    
T  11256220 ctagatttttcttcacactatcttc 11256244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 20244249 - 20244129
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   ||||||| |||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  20244249 ttcacatgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactaa 20244150  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  20244149 atttttcttcacactatcttc 20244129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 176 - 303
Target Start/End: Original strand, 6849288 - 6849415
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || ||||| |||||||| ||||||    
T  6849288 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgttctctc 6849387  T
Q  276 aacactaaatttttcttcacactatctt 303  Q
    ||||||| ||||||||||||||||||||    
T  6849388 aacactagatttttcttcacactatctt 6849415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 39477408 - 39477283
Alignment:
Q  179 gtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaac 278  Q
    ||||||||| |||||||||||||||| |||   |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  39477408 gtgtgttcatatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaac 39477309  T
Q  279 actaaatttttcttcacactatcttc 304  Q
    |||| |||||||||||||||||||||    
T  39477308 actagatttttcttcacactatcttc 39477283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 8113378 - 8113258
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||||||||  |||||||||||||| ||||| |||||||||||| ||||| || ||||||||||||||||||||||||||||     
T  8113378 ttcacatgggaaaggttaatccttttccaccatgggaaagttggattcgatgattagattatgtgaagaacatattcttaacatgctctctcaacactag 8113279  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  8113278 atttttcttcacactatcttc 8113258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 9224274 - 9224394
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  9224274 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 9224373  T
Q  284 atttttcttcacactatcttc 304  Q
    ||||||||||||| |||||||    
T  9224374 atttttcttcacattatcttc 9224394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 16887583 - 16887711
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   ||||||||| |||| |||||||||||||||||||||||| || |||||||||||||| |||||     
T  16887583 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggatagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctg 16887682  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  16887683 aacactagatttttcttcacactatcttc 16887711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 187 - 304
Target Start/End: Complemental strand, 11256815 - 11256698
Alignment:
Q  187 acatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatt 286  Q
    |||||| ||||||||||| ||||  |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  11256815 acatggaaaaggttaatcattttccaccatgagaaagttggattcaatgattagattaagtgaagaatatattcttaacatgctctctcaacactagatt 11256716  T
Q  287 tttcttcacactatcttc 304  Q
    ||||||||||||||||||    
T  11256715 tttcttcacactatcttc 11256698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 4387038 - 4386918
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||| |||||||     
T  4387038 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctcttaacactag 4386939  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  4386938 atttttcttcacactatcttc 4386918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 7583132 - 7583260
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||| |||||||||||||||||   |||||| |||| || |||||||||||||||||| ||||| || |||||||||||||||||||||    
T  7583132 ggtgtgtgttcacatcggaaaggttaatcctttcccaccatgagaaaattggattcaatgattagattaggtgaagaacatattcttaacatgctctctc 7583231  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  7583232 aacactagatttttcttcacactatcttc 7583260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 8963512 - 8963632
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||||||||  | |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||     
T  8963512 ttcacatgggaaaggttaatccttttctatcatgggaaagttggattcaatgattagattaagtgaaaaacatatttttaacatgctctctcaacactag 8963611  T
Q  284 atttttcttcacactatcttc 304  Q
    ||||||||| ||| |||||||    
T  8963612 atttttctttacattatcttc 8963632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 28223796 - 28223916
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   ||||| |||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  28223796 ttcacatgggaaaggttaatcctttcccaccataggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 28223895  T
Q  284 atttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||    
T  28223896 atttttcgtcacactatcttc 28223916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 7583871 - 7583751
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||| |||   || ||||||||||| |||||||||||||| ||||||||| || ||||||||||||||||||||||||||||     
T  7583871 ttcacatgggaaaggttaatcttttcccactatgggaaagttggattcaatgattagcttaagtgaagaacatattcttaacatgctctctcaacactag 7583772  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  7583771 atttttcttcacactatcttc 7583751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 171 - 304
Target Start/End: Original strand, 8112675 - 8112805
Alignment:
Q  171 aagtgggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgct 270  Q
    |||| |||||||||||||||| |||| ||||||||||| | |||||||||||||| ||||||||||||||||||||||   || ||||| |||||||| |    
T  8112675 aagtaggtgtgtgttcacatgagaaatgttaatcctttctcaccatgggaaagttggattcaatgattagattaagtg---aacatatttttaacatgtt 8112771  T
Q  271 ctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||||| |||||||||||||||||||||    
T  8112772 ctctcaacactagatttttcttcacactatcttc 8112805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 176 - 303
Target Start/End: Original strand, 17918021 - 17918148
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||| ||||| ||||||||||||||||||    |||| |||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  17918021 ggtgtgtgtttacatgagaaaggttaatcctttttctttatggaaaagttagattcaatgattagattaagtgaagaatatattcttaacatgttctctc 17918120  T
Q  276 aacactaaatttttcttcacactatctt 303  Q
    ||||||| |||||| |||||||||||||    
T  17918121 aacactagatttttattcacactatctt 17918148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 7716679 - 7716791
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||| |||||||||||   |||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||||||     
T  7716679 ttcacatgggaaatgttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttcaacactag 7716778  T
Q  284 atttttcttcaca 296  Q
    |||||||||||||    
T  7716779 atttttcttcaca 7716791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 16571812 - 16571684
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   | ||||||||| || |||||||||||||||| ||||||| || |||||||||||||||||||||    
T  16571812 ggtgtgtgttcacatgggaaaggttaatcctttcccatcatgggaaaattggattcaatgattagatcaagtgaagaacatattcttaacatgctctctc 16571713  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    |||| || ||||||||| |||||| ||||    
T  16571712 aacattagatttttcttaacactaccttc 16571684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 33847881 - 33848001
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||  |||||||||  |||||||||||| | |||||||  ||||||||||||||| || ||||||||||||||||||||||||||||     
T  33847881 ttcacatgggaaaggccaatccttttccaccatgggaaagatggattcaacaattagattaagtgaagaacatattcttaacatgctctctcaacactat 33847980  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  33847981 atttttcttcacactatcttc 33848001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 187 - 300
Target Start/End: Complemental strand, 6849617 - 6849504
Alignment:
Q  187 acatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatt 286  Q
    |||||| |||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || ||||| |||||||||||||| ||||||| |||    
T  6849617 acatggaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgctctcttaacactagatt 6849518  T
Q  287 tttcttcacactat 300  Q
    ||||||||||||||    
T  6849517 tttcttcacactat 6849504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 187 - 304
Target Start/End: Complemental strand, 16903164 - 16903048
Alignment:
Q  187 acatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatt 286  Q
    |||||||||||||||||||||||  |||||| ||||||| |||||||||||||||||||||||| || ||||| |||||||||||| ||||||||| | |    
T  16903164 acatgggaaaggttaatccttttccaccatgagaaagttggattcaatgattagattaagtgaataacatatttttaacatgctctttcaacactaga-t 16903066  T
Q  287 tttcttcacactatcttc 304  Q
    ||||||||||||||||||    
T  16903065 tttcttcacactatcttc 16903048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 195 - 304
Target Start/End: Original strand, 39476534 - 39476643
Alignment:
Q  195 aaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttca 294  Q
    ||||||||||||||   || |||||||||||  ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  39476534 aaggttaatcctttcccactatgggaaagtttaattcaatgattagattaagtgaagaatatattcttaacatgatctctcaacactagatttttcttca 39476633  T
Q  295 cactatcttc 304  Q
    ||||||||||    
T  39476634 cactatcttc 39476643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 20243589 - 20243681
Alignment:
Q  212 accatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||| || |||||||||||||||||||||    
T  20243589 accatgggaaagttggattcaatgattagattaagtgaagaatatattcttaacatgttctctcaacattagatttttcttcacactatcttc 20243681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 467141 - 467230
Alignment:
Q  212 accatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatc 301  Q
    |||||||||||||| ||||||||||||| |||||||||| || |||||||||||||| ||||||||||||| ||||||||||||||||||    
T  467141 accatgggaaagttggattcaatgattaaattaagtgaagaacatattcttaacatggtctctcaacactagatttttcttcacactatc 467230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 17918720 - 17918643
Alignment:
Q  227 gattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||| ||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17918720 gattcaattattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttc 17918643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 30161941 - 30162061
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||| ||||||| |||||||||||   | ||||| |||||| |||||||||||||||||||||||| || ||||||||||||| |||| |||||| ||     
T  30161941 ttcacgtgggaaaagttaatcctttcccatcatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatactctttcaacattag 30162040  T
Q  284 atttttcttcacactatcttc 304  Q
    ||||||||||||| |||||||    
T  30162041 atttttcttcacattatcttc 30162061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 282
Target Start/End: Original strand, 40165881 - 40165979
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacacta 282  Q
    ||||||||||||||   |||| ||||  |||||||||||||| |||||||||||| ||||||||||| || |||||||||||||||||| |||||||||    
T  40165881 ttcacatgggaaagaccaatcattttccaccatgggaaagttggattcaatgattggattaagtgaagaacatattcttaacatgctctttcaacacta 40165979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 40166929 - 40166807
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||| |||||| |||||||||||||||||   ||||||||||| || ||||||||||||||||||||| || || ||||| ||||||||      |    
T  40166929 ggtgtgtgctcacataggaaaggttaatcctttcccaccatgggaaaattggattcaatgattagattaagtcaagaacatatttttaacatg------c 40166836  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||| ||||||||||||||    
T  40166835 aacactagattttttttcacactatcttc 40166807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 303
Target Start/End: Complemental strand, 467429 - 467300
Alignment:
Q  176 ggtgtgtgttcacatggg--aaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctc 273  Q
    ||||||||||||| ||||  ||||||||||| ||||  ||| ||  ||||||  ||||||| |||| |||||||||| || |||||||||||||| ||||    
T  467429 ggtgtgtgttcacgtgggggaaaggttaatcattttccaccgtgaaaaagttgaattcaataattaaattaagtgaagaacatattcttaacatgttctc 467330  T
Q  274 tcaacactaaatttttcttcacactatctt 303  Q
    |||| | || ||||||||||| ||||||||    
T  467329 tcaatattagatttttcttcaaactatctt 467300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 4386355 - 4386422
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagatt 243  Q
    |||||||||||||||||||||||||||| ||||   ||||| |||||||| |||||||||||||||||    
T  4386355 ggtgtgtgttcacatgggaaaggttaatactttcccaccataggaaagttggattcaatgattagatt 4386422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 2e-50; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 175 - 304
Target Start/End: Original strand, 26687499 - 26687628
Alignment:
Q  175 gggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctct 274  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  26687499 gggtgtgtgttcacatgggaaaggttaatccttttctaccatgggaaagttagattcaatgattagattaagtgaagaacatattcttaacatgctctct 26687598  T
Q  275 caacactaaatttttcttcacactatcttc 304  Q
    ||||| || |||||||||||||||||||||    
T  26687599 caacattagatttttcttcacactatcttc 26687628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 175 - 304
Target Start/End: Original strand, 26957230 - 26957359
Alignment:
Q  175 gggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctct 274  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  26957230 gggtgtgtgttcacatgggaaaggttaatccttttctaccatgggaaagttagattcaatgattagattaagtgaagaacatattcttaacatgctctct 26957329  T
Q  275 caacactaaatttttcttcacactatcttc 304  Q
    ||||| || |||||||||||||||||||||    
T  26957330 caacattagatttttcttcacactatcttc 26957359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 28076047 - 28075927
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||| ||||||||||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  28076047 ttcacatggaaaaggttaatcattttccaccatgggaaagttggattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactag 28075948  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  28075947 atttttcttcacactatcttc 28075927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 4929584 - 4929462
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||     
T  4929584 ttcacatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaatatatttttaacatgctctctcaacactag 4929485  T
Q  284 atttttcttcacactatcttcaa 306  Q
    |||||||||| ||||||||||||    
T  4929484 atttttcttcgcactatcttcaa 4929462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 3957508 - 3957628
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || |||||||||| ||| |||||||||||||     
T  3957508 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaatatgttctctcaacactag 3957607  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  3957608 atttttcttcacactatcttc 3957628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 184 - 299
Target Start/End: Complemental strand, 5324481 - 5324366
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||| ||||   |||||| ||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  5324481 ttcacatgggaaaggttaattctttcataccatgagaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactaa 5324382  T
Q  284 atttttcttcacacta 299  Q
    ||||||||||||||||    
T  5324381 atttttcttcacacta 5324366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 4928871 - 4928999
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||||||| |||||||||||   ||||| | |||||| |||| ||||||||||||||||||| || |||||||||||||| ||||||    
T  4928871 ggtgtgtgttcacatgggaaaagttaatcctttcccaccatagaaaagttggatttaatgattagattaagtgaagaacatattcttaacatgttctctc 4928970  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  4928971 aacactagatttttcttcacactatcttc 4928999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 176 - 300
Target Start/End: Original strand, 21769994 - 21770122
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcg----attcaatgattagattaagtgaaaaatatattcttaacatgctc 271  Q
    |||||||||||| |||||||||||||||||||||  |||||||||||||| |    ||||||||||||||||||||||| || |||||||||||||| ||    
T  21769994 ggtgtgtgttcatatgggaaaggttaatccttttccaccatgggaaagttggttggattcaatgattagattaagtgaagaacatattcttaacatgttc 21770093  T
Q  272 tctcaacactaaatttttcttcacactat 300  Q
    |||||||| ||||||||||||||||||||    
T  21770094 tctcaacattaaatttttcttcacactat 21770122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 176 - 300
Target Start/End: Complemental strand, 3739749 - 3739625
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||| |||||  ||||||||||   || ||| ||||||| |||||||||||||||||||||||| || |||||||||||||||||||||    
T  3739749 ggtgtgtgttcacataggaaaacttaatcctttcctactatgagaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctc 3739650  T
Q  276 aacactaaatttttcttcacactat 300  Q
    ||||||| |||||||||||||||||    
T  3739649 aacactagatttttcttcacactat 3739625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 180 - 304
Target Start/End: Complemental strand, 3958216 - 3958092
Alignment:
Q  180 tgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaaca 279  Q
    |||||||||||||||||||||||||||||   | ||  |||||||| |||||||| ||||||||||||||| || ||||| ||||||| |||||||||||    
T  3958216 tgtgttcacatgggaaaggttaatcctttcccatcaatggaaagtttgattcaataattagattaagtgaagaacatatttttaacatactctctcaaca 3958117  T
Q  280 ctaaatttttcttcacactatcttc 304  Q
    |||||||||||||||||||||||||    
T  3958116 ctaaatttttcttcacactatcttc 3958092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 8813761 - 8813641
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||| |||||||||||||||||||||  | |||||||||||| ||||||||||||||||||||| || || ||||||||||||||||||||| ||||||     
T  8813761 ttcatatgggaaaggttaatccttttccatcatgggaaagttggattcaatgattagattaagtaaagaacatattcttaacatgctctctctacactag 8813662  T
Q  284 atttttcttcacactatcttc 304  Q
    |||| ||||||||||||||||    
T  8813661 atttgtcttcacactatcttc 8813641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 33430051 - 33430170
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||| |||||||||||||||   ||||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  33430051 ttcacatggaaaaggttaatcctttcctaccatgg-aaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 33430149  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||| ||||||||||    
T  33430150 atttttcttcgcactatcttc 33430170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 3739038 - 3739128
Alignment:
Q  214 catgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||    
T  3739038 catgggaaagttggattcaatgattagattaagtgaaaaatatattcttaacatactctctcaacactagatttttcttcacaatatcttc 3739128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 42408613 - 42408523
Alignment:
Q  214 catgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    ||||| |||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42408613 catggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttc 42408523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 26688092 - 26688014
Alignment:
Q  227 gattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacacta-aatttttcttcacactatcttc 304  Q
    ||||||||||||| |||||||||| || |||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  26688092 gattcaatgattatattaagtgaagaacatattcttaacatgctctctcaacactagattttttcttcacactatcttc 26688014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 26957823 - 26957745
Alignment:
Q  227 gattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacacta-aatttttcttcacactatcttc 304  Q
    ||||||||||||| |||||||||| || |||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  26957823 gattcaatgattatattaagtgaagaacatattcttaacatgctctctcaacactagattttttcttcacactatcttc 26957745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 215 - 304
Target Start/End: Original strand, 13738099 - 13738187
Alignment:
Q  215 atgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    ||||||||||| |||||||||||| ||||||||||| || |||||||| ||||| ||| ||||||||| |||||||||||||||||||||    
T  13738099 atgggaaagttggattcaatgattggattaagtgaagaacatattctttacatg-tctttcaacactagatttttcttcacactatcttc 13738187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 42408031 - 42408119
Alignment:
Q  215 atgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatctt 303  Q
    |||||||| || ||||||||||||||||||| |||| || |||||||||||||| |||||||| | || ||||||||||| ||||||||    
T  42408031 atgggaaaattggattcaatgattagattaaatgaagaacatattcttaacatgttctctcaatattagatttttcttcaaactatctt 42408119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 8813134 - 8813183
Alignment:
Q  255 atattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  8813134 atattcttaacatgttctctcaacactatatttttcttcacactatcttc 8813183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 5324304 - 5324368
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattag 240  Q
    |||||||||||||||||||||| ||||||||||   | |||||||||||| ||||||||||||||    
T  5324304 ggtgtgtgttcacatgggaaagcttaatcctttcctatcatgggaaagttggattcaatgattag 5324368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 8813078 - 8813135
Alignment:
Q  177 gtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaat 234  Q
    ||||||||||| |||||||||||||||||| |   |||||||||||||| ||||||||    
T  8813078 gtgtgtgttcatatgggaaaggttaatcctctcccaccatgggaaagttggattcaat 8813135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 279
Target Start/End: Original strand, 12707058 - 12707096
Alignment:
Q  241 attaagtgaaaaatatattcttaacatgctctctcaaca 279  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  12707058 attaaatgaagaatatattcttaacatgctctctcaaca 12707096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 39148768 - 39148818
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttc 226  Q
    |||||||||||| ||||||||||| ||| |||||  |||||||||||||||    
T  39148768 ggtgtgtgttcatatgggaaaggtgaattcttttccaccatgggaaagttc 39148818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 341
Target Start/End: Complemental strand, 33430071 - 33430042
Alignment:
Q  312 gattaaccttttccatgtgaaatgccacca 341  Q
    ||||||||||||||||||||||||||||||    
T  33430071 gattaaccttttccatgtgaaatgccacca 33430042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 25075074 - 25075034
Alignment:
Q  185 tcacatgggaaaggttaatcctttttaaccatgggaaagtt 225  Q
    ||||||||||||||||||||||||   ||||||||||||||    
T  25075074 tcacatgggaaaggttaatcctttcccaccatgggaaagtt 25075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 25133043 - 25133003
Alignment:
Q  185 tcacatgggaaaggttaatcctttttaaccatgggaaagtt 225  Q
    ||||||||||||||||||||||||   ||||||||||||||    
T  25133043 tcacatgggaaaggttaatcctttcccaccatgggaaagtt 25133003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 33001992 - 33002060
Alignment:
Q  236 attagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||| |||  |||| ||||||| |||  ||||||||||||||||| || || |||||||||||    
T  33001992 attagattaaatgaggaatacattcttatcatattctctcaacactaaattattttttacactatcttc 33002060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 6e-50; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 30116082 - 30115954
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| ||||||    
T  30116082 ggtgtgtgttcacatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtaaagaatatattcttaacatgttctctc 30115983  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  30115982 aacactagatttttcttcacactatcttc 30115954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 44061985 - 44062113
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||| ||||||||||| ||||  ||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||    
T  44061985 ggtgtgtgttcacatgagaaaggttaatactttccaaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctc 44062084  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  44062085 aacactagatttttcttcacactatcttc 44062113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 11998456 - 11998584
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||||    
T  11998456 ggtgtgtgttcacatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctc 11998555  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  11998556 aacactagatttttcttcacactatcttc 11998584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 33114266 - 33114146
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  33114266 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 33114167  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  33114166 atttttcttcacactatcttc 33114146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 7818482 - 7818602
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||     
T  7818482 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttatcatgctctctcaacactag 7818581  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  7818582 atttttcttcacactatcttc 7818602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 43481367 - 43481239
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||  |||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || ||||| |||||||||||||||    
T  43481367 ggtgtgtgttcacatgaaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgctctctc 43481268  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  43481267 aacactagatttttcttcacactatcttc 43481239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 43591007 - 43591135
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||||  |||||||||||||||||| |||| || |||||||||||||| ||||||    
T  43591007 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaaatgaagaacatattcttaacatgatctctc 43591106  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  43591107 aacactagatttttcttcacactatcttc 43591135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 184 - 303
Target Start/End: Original strand, 35237267 - 35237386
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||| |||| |||||    
T  35237267 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaataacatattcttaacatgctctttcaatactaa 35237366  T
Q  284 atttttcttcacactatctt 303  Q
    ||||||||||||||||||||    
T  35237367 atttttcttcacactatctt 35237386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 175 - 304
Target Start/End: Complemental strand, 39852890 - 39852761
Alignment:
Q  175 gggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctct 274  Q
    ||||||||||||||||| ||||||||||||||||   |||||   |||||| |||||||| ||||||||||||||| |||||||||||||||||||||||    
T  39852890 gggtgtgtgttcacatgagaaaggttaatcctttcccaccataaaaaagttagattcaattattagattaagtgaagaatatattcttaacatgctctct 39852791  T
Q  275 caacactaaatttttcttcacactatcttc 304  Q
    |||||||| |||||||||||||||||||||    
T  39852790 caacactagatttttcttcacactatcttc 39852761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 11999158 - 11999038
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||| |||   |||||||||||||| |||||||||||||||| ||||||| || ||||||||||||||||||||||||||||     
T  11999158 ttcacatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagatgaagtgaagaacatattcttaacatgctctctcaacactag 11999059  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  11999058 atttttcttcacactatcttc 11999038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 16889913 - 16889786
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||| |||||||| |||   |||||||||||||| |||||||| ||||||||||||||| || |||||||||||||||||||||    
T  16889913 ggtgtgtgttcacatgggaa-ggttaatcatttcccaccatgggaaagttggattcaattattagattaagtgaagaacatattcttaacatgctctctc 16889815  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  16889814 aacactagatttttcttcacactatcttc 16889786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 192 - 304
Target Start/End: Complemental strand, 44062666 - 44062554
Alignment:
Q  192 ggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttct 291  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||||||||||| | |||||||| |||||||||||||||||||||| ||||||||    
T  44062666 ggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtggagaatatattattaacatgctctctcaacactagatttttct 44062567  T
Q  292 tcacactatcttc 304  Q
    |||||||||||||    
T  44062566 tcacactatcttc 44062554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 175 - 299
Target Start/End: Complemental strand, 7819184 - 7819060
Alignment:
Q  175 gggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctct 274  Q
    ||||||||||||||||||||||| |||||| |||   |||||| ||||||| |||||||||||||||||||||||| || |||||||||||||| |||||    
T  7819184 gggtgtgtgttcacatgggaaagattaatcttttcccaccatgcgaaagttagattcaatgattagattaagtgaagaacatattcttaacatgttctct 7819085  T
Q  275 caacactaaatttttcttcacacta 299  Q
    |||||||| ||||||||||||||||    
T  7819084 caacactagatttttcttcacacta 7819060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 16889203 - 16889323
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||| |||   |||||||||||||| |||||||||||||||||||||||| || ||||||||| |||||||| |||||||||     
T  16889203 ttcacatgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttatcatgctctttcaacactag 16889302  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  16889303 atttttcttcacactatcttc 16889323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 38778881 - 38778753
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||| ||||||||||| |||||||||||| ||| | |||||| |||||||  ||||||||||||||||||||||| |||||||| ||||||| |||||||    
T  38778881 ggtgggtgttcacatgagaaaggttaatcatttctcaccatgagaaagttgtattcaatgattagattaagtgaagaatatatttttaacatactctctc 38778782  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  38778781 aacactagatttttcttcacactatcttc 38778753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 39852162 - 39852282
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||| ||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||| ||||||||||     
T  39852162 ttcaaatgggaaaggttaatcctttcccaccatgggaaagtttgattcaatgattagattaagtgaagaacatattcttaacatgctccctcaacactag 39852261  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||| ||||||||||||||    
T  39852262 attttttttcacactatcttc 39852282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 300
Target Start/End: Original strand, 43480624 - 43480740
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||| ||||  |||||||||||||| |||| ||||||||||||||||||| || |||||||||||||| |||||||||||||     
T  43480624 ttcacatgggaaaggttaatctttttacaccatgggaaagttggattaaatgattagattaagtgaagaacatattcttaacatgttctctcaacactag 43480723  T
Q  284 atttttcttcacactat 300  Q
    |||||||||||||||||    
T  43480724 atttttcttcacactat 43480740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 186 - 304
Target Start/End: Original strand, 33113585 - 33113703
Alignment:
Q  186 cacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaat 285  Q
    |||||||||||| |||||| |||   |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| ||    
T  33113585 cacatgggaaagattaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaatatattcttaacatgttctcttaacactagat 33113684  T
Q  286 ttttcttcacactatcttc 304  Q
    |||||||||||||||||||    
T  33113685 ttttcttcacactatcttc 33113703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 2209042 - 2209134
Alignment:
Q  212 accatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2209042 accatgagaaagttcgattcaatgattagattaagtgaataacatattcttaacatgctctctcaacactagatttttcttcacactatcttc 2209134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 181 - 293
Target Start/End: Complemental strand, 16880599 - 16880487
Alignment:
Q  181 gtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacac 280  Q
    ||||||||||||||||| ||||||||||   |||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  16880599 gtgttcacatgggaaagattaatcctttcccaccatgtgaaagttagattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacac 16880500  T
Q  281 taaatttttcttc 293  Q
    || ||||||||||    
T  16880499 tagatttttcttc 16880487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 40309578 - 40309458
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||| | ||||||||||| |||   ||||| |||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  40309578 ttcacatagaaaaggttaatcatttcccaccataggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 40309479  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  40309478 atttttcttcacactatcttc 40309458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 176 - 300
Target Start/End: Complemental strand, 36848283 - 36848163
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||| |||||||||||  ||||||| |||||| |||||||||||||||||||||||| || |||||||||||||    ||||    
T  36848283 ggtgtgtgttcacatgggaaagcttaatccttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacat----tctc 36848188  T
Q  276 aacactaaatttttcttcacactat 300  Q
    ||||||| |||||||||||||||||    
T  36848187 aacactagatttttcttcacactat 36848163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 38778172 - 38778282
Alignment:
Q  194 aaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttc 293  Q
    ||||||||||| |||   |||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||||| ||||||||||    
T  38778172 aaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttcaacactagatttttcttc 38778271  T
Q  294 acactatcttc 304  Q
    |||||||||||    
T  38778272 acactatcttc 38778282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 40907599 - 40907723
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   |||| ||||||||| |||||||||||||||||||||||| || |||||||||||||| |||       
T  40907599 ggtgtgtgttcacatgggaaaggttaatcctttcccaccacgggaaagtt-gattcaatgattagattaagtgaagaacatattcttaacatgttct--- 40907694  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    |||||||||||||||| ||||||||||||    
T  40907695 aacactaaatttttctccacactatcttc 40907723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 195 - 304
Target Start/End: Original strand, 30115386 - 30115495
Alignment:
Q  195 aaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttca 294  Q
    ||||||||||||||   ||||||| |||||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||||| |||||||||||    
T  30115386 aaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttcaacactagatttttcttca 30115485  T
Q  295 cactatcttc 304  Q
    ||||||||||    
T  30115486 cactatcttc 30115495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 10806515 - 10806395
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||| |||   |||||||||||||| ||||||||||||| ||||||| || || |||||||||||||||||||| || ||||     
T  10806515 ttcacatgggaaaggttaatcttttcctaccatgggaaagtttgattcaatgattaaattaagtaaagaacatattcttaacatgctctcttaaaactag 10806416  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  10806415 atttttcttcacactatcttc 10806395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 43591694 - 43591574
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||  |||   |||||||||||||| || ||||||||||||||||||||| || |||||||||||||||||||| |||||||     
T  43591694 ttcacatgggaaaggttaattatttcccaccatgggaaagttagagtcaatgattagattaagtgaagaacatattcttaacatgctctcttaacactag 43591595  T
Q  284 atttttcttcacactatcttc 304  Q
    ||||||||||||| |||||||    
T  43591594 atttttcttcacaatatcttc 43591574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 4374349 - 4374259
Alignment:
Q  214 catgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  4374349 catgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacattagatttttcttcacactatcttc 4374259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 215 - 304
Target Start/End: Original strand, 10805987 - 10806076
Alignment:
Q  215 atgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    ||||||||||| ||||||||||||||||||| |||| || |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10805987 atgggaaagttggattcaatgattagattaaatgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttc 10806076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 16879896 - 16880016
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||| ||||||| |||   | |||| ||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||| | |      
T  16879896 ttcacatgggaaaagttaatcatttcctatcatgagaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaatatttg 16879995  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  16879996 atttttcttcacactatcttc 16880016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 176 - 299
Target Start/End: Original strand, 4373686 - 4373809
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||||||| ||||||| |||   | ||| ||||||||  |||||||||||| |||||||||| || |||||||||||||| |||| |    
T  4373686 ggtgtgtgttcacatgggaaatgttaatcatttcccatcataggaaagttgaattcaatgattatattaagtgaagaacatattcttaacatgttctcgc 4373785  T
Q  276 aacactaaatttttcttcacacta 299  Q
    ||||||| ||||||||||||||||    
T  4373786 aacactagatttttcttcacacta 4373809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 4375070 - 4374950
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||| ||||||||| | |||| ||||  |||||| ||||||| |||||||||||| ||||||||||| || ||||| |||||||||||| |||||||||     
T  4375070 ttcatatgggaaagatgaatcattttccaccatgagaaagttggattcaatgattggattaagtgaagaacatatttttaacatgctctttcaacactag 4374971  T
Q  284 atttttcttcacactatcttc 304  Q
    ||||||||| |||||||||||    
T  4374970 atttttctttacactatcttc 4374950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 178 - 261
Target Start/End: Complemental strand, 35237947 - 35237865
Alignment:
Q  178 tgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattct 261  Q
    |||||||||||||||||||||||||||||||   ||||| | |||||| |||||||| ||||||||||||||| || |||||||    
T  35237947 tgtgtgttcacatgggaaaggttaatcctttcccaccatagaaaagtt-gattcaataattagattaagtgaagaacatattct 35237865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 37533363 - 37533331
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatccttt 208  Q
    |||||||||||||||||||||||||||||||||    
T  37533363 ggtgtgtgttcacatgggaaaggttaatccttt 37533331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 5035264 - 5035196
Alignment:
Q  236 attagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||| |||  |||| ||||||| ||| |||||||||||||||||| |  || |||||||||||    
T  5035264 attagattaaatgaggaatacattcttatcatactctctcaacactaaattatgttttacactatcttc 5035196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 176 - 303
Target Start/End: Original strand, 19816264 - 19816391
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||    
T  19816264 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgtaaaacatattcttaacatgctctctc 19816363  T
Q  276 aacactaaatttttcttcacactatctt 303  Q
    ||||||| ||||||||||||||||||||    
T  19816364 aacactagatttttcttcacactatctt 19816391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 174 - 304
Target Start/End: Complemental strand, 24044131 - 24044001
Alignment:
Q  174 tgggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctc 273  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||  ||||||||||||||||||||||| || |||||||||||||||||||    
T  24044131 tgggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttttattcaatgattagattaagtgaagaacatattcttaacatgctctc 24044032  T
Q  274 tcaacactaaatttttcttcacactatcttc 304  Q
    ||||||||| |||||||||||||||||||||    
T  24044031 tcaacactagatttttcttcacactatcttc 24044001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 177 - 304
Target Start/End: Complemental strand, 36683549 - 36683422
Alignment:
Q  177 gtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctca 276  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  36683549 gtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgctctctca 36683450  T
Q  277 acactaaatttttcttcacactatcttc 304  Q
    |||||| |||||||||||||||||||||    
T  36683449 acactagatttttcttcacactatcttc 36683422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 47814723 - 47814597
Alignment:
Q  174 tgggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctc 273  Q
    |||||||||||||||||||||||| ||||||||||   |||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||    
T  47814723 tgggtgtgtgttcacatgggaaagcttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctc 47814624  T
Q  274 tcaacactaaatttttcttcacactat 300  Q
    ||||||||| |||||||||||||||||    
T  47814623 tcaacactagatttttcttcacactat 47814597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 34853391 - 34853519
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||||  ||||||||||||||||||||||| || |||||||||||||| ||||||    
T  34853391 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgatctctc 34853490  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  34853491 aacactagatttttcttcacactatcttc 34853519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 4895160 - 4895040
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||| ||||  |||||||||||||| |||||||| ||||||||||||||| || ||||||||||||||||||||||||||||     
T  4895160 ttcacatgggaaaggttaatcattttccaccatgggaaagttggattcaattattagattaagtgaagaacatattcttaacatgctctctcaacactag 4895061  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  4895060 atttttcttcacactatcttc 4895040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 36682843 - 36682963
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||| |||   |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  36682843 ttcacatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 36682942  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  36682943 atttttcttcacactatcttc 36682963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 22275425 - 22275552
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||| ||||||||||| |||   |||||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||||    
T  22275425 ggtgtgtgttcacatggaaaaggttaatcatttcccaccatgggaaagtt-gattcaatgattagattaagtgaagaacatattcttaacatgttctctc 22275523  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  22275524 aacactagatttttcttcacactatcttc 22275552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 42456602 - 42456474
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||| |||||||||| || ||||| |||||||| ||||||    
T  42456602 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattacattaagtgaagaacatatttttaacatgttctctc 42456503  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||| | |||||||||||||||||||||    
T  42456502 aacacaagatttttcttcacactatcttc 42456474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 304
Target Start/End: Original strand, 47813985 - 47814099
Alignment:
Q  190 tgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaattttt 289  Q
    |||||||||||||||||||   ||||||| |||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||    
T  47813985 tgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagattttt 47814084  T
Q  290 cttcacactatcttc 304  Q
    |||||||||||||||    
T  47814085 cttcacactatcttc 47814099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 300
Target Start/End: Complemental strand, 19816970 - 19816854
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||| |||||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||||| || ||||| ||||||||||||||||||||||     
T  19816970 ttcatatgggaaaggttaatccttttccaccatgggaaagttggattaaatgattagattaagtgaagaacatatttttaacatgctctctcaacactag 19816871  T
Q  284 atttttcttcacactat 300  Q
    |||||||||||||||||    
T  19816870 atttttcttcacactat 19816854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 34854074 - 34853954
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   ||||| |||||||| || ||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  34854074 ttcacatgggaaaggttaatcctttcccaccataggaaagttagagtcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 34853975  T
Q  284 atttttcttcacactatcttc 304  Q
    ||||||||||||| |||||||    
T  34853974 atttttcttcacaatatcttc 34853954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 42455929 - 42456049
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   |||| |||||| || ||||||||||||| |||||||||| || ||||||||||||||||||||||||||||     
T  42455929 ttcacatgggaaaggttaatcctttcccaccacgggaaaattggattcaatgattaaattaagtgaagaacatattcttaacatgctctctcaacactag 42456028  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  42456029 atttttcttcacactatcttc 42456049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 46814405 - 46814533
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||| ||||||||||||||||||||||   ||||||||||||||  |||||| |||||||||||||||| || |||||||||||||||||| ||    
T  46814405 ggtgtgtgtttacatgggaaaggttaatcctttcccaccatgggaaagttgaattcaacgattagattaagtgaagaacatattcttaacatgctctttc 46814504  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    |||| || |||||||||||||||||||||    
T  46814505 aacattagatttttcttcacactatcttc 46814533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 192 - 304
Target Start/End: Original strand, 4894515 - 4894627
Alignment:
Q  192 ggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttct 291  Q
    |||||||||||||||||   ||||||||||||||  ||||||||||||||||||||||| || |||||||||||||| ||||||||||||| ||||||||    
T  4894515 ggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactagatttttct 4894614  T
Q  292 tcacactatcttc 304  Q
    |||||||||||||    
T  4894615 tcacactatcttc 4894627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 187 - 303
Target Start/End: Complemental strand, 22276151 - 22276035
Alignment:
Q  187 acatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatt 286  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||| |||| || ||||| |||||||||||| ||||||||| |||    
T  22276151 acatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaaatgaagaacatatttttaacatgctctttcaacactagatt 22276052  T
Q  287 tttcttcacactatctt 303  Q
    |||||||||||||||||    
T  22276051 tttcttcacactatctt 22276035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 27855574 - 27855693
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||| |||   |||||| ||||||| |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||     
T  27855574 ttcacatgggaaaggttaatcatttcccaccatgagaaagtt-gattcaatgattagattaagtgaagaacatattcttatcatgctctctcaacactag 27855672  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  27855673 atttttcttcacactatcttc 27855693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 46732575 - 46732695
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||| ||||   || |||| |||||| |||||||||||||||||||||||| || ||||||||||||| ||||||||||||||     
T  46732575 ttcacatgggaaaggttaattctttcccactatggaaaagttggattcaatgattagattaagtgaataacatattcttaacattctctctcaacactag 46732674  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  46732675 atttttcttcacactatcttc 46732695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 180 - 304
Target Start/End: Original strand, 30711792 - 30711916
Alignment:
Q  180 tgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaaca 279  Q
    ||||||||||||| ||||||||||  |||   ||||||| |||||| |||||||| ||||||||||||||| || |||||||||||||||||||||||||    
T  30711792 tgtgttcacatggaaaaggttaattttttcccaccatggaaaagttggattcaattattagattaagtgaagaacatattcttaacatgctctctcaaca 30711891  T
Q  280 ctaaatttttcttcacactatcttc 304  Q
     || |||||||||||||||||||||    
T  30711892 ttagatttttcttcacactatcttc 30711916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 32499287 - 32499377
Alignment:
Q  214 catgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  32499287 catgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcatcacactatcttc 32499377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 24324067 - 24323940
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||||||||||||||| |||   || |||||||| || |||||||| ||||||||||||||| || |||||||||||||| |||||     
T  24324067 ggtgtgtgttcacatgggaaaggttaatcatttcccactatgggaaa-ttggattcaataattagattaagtgaagaacatattcttaacatgttctctg 24323969  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||| ||||||||||    
T  24323968 aacactagatttttcttctcactatcttc 24323940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 33805977 - 33806097
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||   |||| ||||  ||||||| |||||| ||||||||||||| |||||||||| || |||||||||||||||||| |||||||||     
T  33805977 ttcacatgggaaagaccaatcattttccaccatggaaaagttggattcaatgattaaattaagtgaagaacatattcttaacatgctctttcaacactag 33806076  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||| ||||||||||    
T  33806077 atttttcttcgcactatcttc 33806097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 36620820 - 36620698
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||| ||||||||||| ||||   ||||||   |||| |||||||||||||||||||||||| || ||||| ||||||||||| |||    
T  36620820 ggtgtgtgttcacatggaaaaggttaatcatttt---ccatgg---agttggattcaatgattagattaagtgaagaacatattattaacatgctcactc 36620727  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| ||||||||| |||||||||||    
T  36620726 aacactagatttttctttacactatcttc 36620698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 46815112 - 46815020
Alignment:
Q  212 accatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||||||| ||||||||||||||||||| |||| || ||||||||||||||||||||||||| || ||||||||| |||||||||||    
T  46815112 accatgggaaagttggattcaatgattagattaaatgaagaacatattcttaacatgctctctcaacattagatttttcttaacactatcttc 46815020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 217 - 304
Target Start/End: Complemental strand, 32499917 - 32499831
Alignment:
Q  217 gggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    ||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  32499917 gggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagattttt-ttcacactatcttc 32499831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 218 - 303
Target Start/End: Original strand, 18520899 - 18520984
Alignment:
Q  218 ggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatctt 303  Q
    |||||||| |||||||||||||||||||||||| || |||||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  18520899 ggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctttcaacactagatttttcttcacactatctt 18520984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 36620126 - 36620246
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||| |||||||||||||||| ||||  | |||| |||||||  |||||||||||| ||||||||||||| ||||| |||||||||||| |||||||||     
T  36620126 ttcatatgggaaaggttaatctttttctatcatgagaaagttgaattcaatgattaaattaagtgaaaaacatattattaacatgctctttcaacactag 36620225  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||| |||||| |||||||    
T  36620226 attttttttcacaatatcttc 36620246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 303
Target Start/End: Complemental strand, 46012975 - 46012899
Alignment:
Q  227 gattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacacta-aatttttcttcacactatctt 303  Q
    |||||||||||||||||||||||| || ||||| |||||||||||||||||||||| | |||||||||||||||||||    
T  46012975 gattcaatgattagattaagtgaagaacatatt-ttaacatgctctctcaacactagattttttcttcacactatctt 46012899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 240 - 299
Target Start/End: Complemental strand, 27856165 - 27856106
Alignment:
Q  240 gattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacacta 299  Q
    ||||||||||| || |||||||||||||| ||||||||||||| ||||||||||||||||    
T  27856165 gattaagtgaagaacatattcttaacatgttctctcaacactagatttttcttcacacta 27856106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 84377 - 84427
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttc 226  Q
    |||||||||||||||||||||||| ||||||||   || ||||||||||||    
T  84377 ggtgtgtgttcacatgggaaaggtgaatcctttcccactatgggaaagttc 84427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 27856216 - 27856184
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatccttt 208  Q
    ||||||||||||||||||||||||||||| |||    
T  27856216 ggtgtgtgttcacatgggaaaggttaatcattt 27856184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 4e-48; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 175 - 304
Target Start/End: Original strand, 31014336 - 31014465
Alignment:
Q  175 gggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctct 274  Q
    ||||||||||||||||| ||||| |||||||||||  |||||||||||||| |||||||||||||||||||||||| || |||||||||||||| |||||    
T  31014336 gggtgtgtgttcacatgagaaagattaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctct 31014435  T
Q  275 caacactaaatttttcttcacactatcttc 304  Q
    ||||||||||||||||||||||||||||||    
T  31014436 caacactaaatttttcttcacactatcttc 31014465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 23584237 - 23584365
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  23584237 ggtgtgtgttcacatgggacaggttaatcctttcccaccatgggaaagttcgattcaatgattagattaagtgaaaaacatattcttaacatgttctctc 23584336  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    |||| || |||||||||||||||||||||    
T  23584337 aacagtagatttttcttcacactatcttc 23584365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 23599060 - 23599188
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  23599060 ggtgtgtgttcacatgggacaggttaatcctttcccaccatgggaaagttcgattcaatgattagattaagtgaaaaacatattcttaacatgttctctc 23599159  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    |||| || |||||||||||||||||||||    
T  23599160 aacagtagatttttcttcacactatcttc 23599188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 175 - 304
Target Start/End: Complemental strand, 25025851 - 25025722
Alignment:
Q  175 gggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctct 274  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||| ||| || |||||||||||||| |||||    
T  25025851 gggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagtttgattcaatgattagattaagagaagaacatattcttaacatgttctct 25025752  T
Q  275 caacactaaatttttcttcacactatcttc 304  Q
    |||||||| |||||||||||||||||||||    
T  25025751 caacactagatttttcttcacactatcttc 25025722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 3944903 - 3945023
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  3944903 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 3945002  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  3945003 atttttcttcacactatcttc 3945023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 41875702 - 41875574
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||| |||||||| ||||||| ||||| |||||||||||||| | |||||||||||||||||||||| || |||||||||||||||||||||    
T  41875702 ggtgtgtgttcagatgggaaaagttaatcattttttaccatgggaaagttgggttcaatgattagattaagtgaagaacatattcttaacatgctctctc 41875603  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  41875602 aacactagatttttcttcacactatcttc 41875574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 44868704 - 44868576
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| || |||||||||||||||||||||||| || |||||||||||||||||||||    
T  44868704 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaaatttgattcaatgattagattaagtgaagaacatattcttaacatgctctctc 44868605  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| ||||||||| |||||||||||    
T  44868604 aacactagatttttcttaacactatcttc 44868576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 55281835 - 55281963
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| || |||| ||||||||||||||||||| || |||||||||||||||||||||    
T  55281835 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaaattggatttaatgattagattaagtgaagaacatattcttaacatgctctctc 55281934  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  55281935 aacactagatttttcttcacactatcttc 55281963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 175 - 304
Target Start/End: Complemental strand, 8427830 - 8427701
Alignment:
Q  175 gggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctct 274  Q
    |||| |||||||||||||| ||||||||||||||   |||||||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||    
T  8427830 gggtatgtgttcacatggggaaggttaatcctttcccaccatgggaaagttagatttaatgattagattaagtgaagaacatattcttaacatgctctct 8427731  T
Q  275 caacactaaatttttcttcacactatcttc 304  Q
    |||||||| |||||||||||||||||||||    
T  8427730 caacactagatttttcttcacactatcttc 8427701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 29342341 - 29342469
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||| |||    
T  29342341 ggtgtgtgttcacatgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctccctc 29342440  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
     |||||| |||||||||||||||||||||    
T  29342441 cacactagatttttcttcacactatcttc 29342469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 50687786 - 50687666
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||| ||||   |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  50687786 ttcacatgggaaaggttaattctttcccaccatgggaaagtttgattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 50687687  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  50687686 atttttcttcacactatcttc 50687666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 23584961 - 23584841
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   ||||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  23584961 ttcacatgggaaaggttaatcctttcccaccatggtaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 23584862  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||| ||||    
T  23584861 atttttcttcacactaccttc 23584841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 23599784 - 23599664
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   ||||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  23599784 ttcacatgggaaaggttaatcctttcccaccatggtaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 23599685  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||| ||||    
T  23599684 atttttcttcacactaccttc 23599664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 25025182 - 25025302
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   | |||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  25025182 ttcacatgggaaaggttaatcctttcccatcatgggaaagtttgattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 25025281  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||| ||||||||||||||    
T  25025282 attttttttcacactatcttc 25025302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 44868015 - 44868135
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||| ||||||||||||| ||||  |||||||||||||| ||||||||||||||||||||| || || ||||||||||||||||||||||||||||     
T  44868015 ttcacataggaaaggttaatcattttccaccatgggaaagttggattcaatgattagattaagtaaagaacatattcttaacatgctctctcaacactag 44868114  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  44868115 atttttcttcacactatcttc 44868135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 48218591 - 48218719
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||| |||||||||||| |||   || |||| |||||| |||||||||||||||||||||||| || |||||||||||||||||||||    
T  48218591 ggtgtgtgttcacatgagaaaggttaatcttttcccactatggaaaagttggattcaatgattagattaagtgaataacatattcttaacatgctctctc 48218690  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  48218691 aacactagatttttcttcacactatcttc 48218719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 50675203 - 50675083
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||| || ||||| ||||||||| ||||||||||||     
T  50675203 ttcacatgggaaaggttaatcctttttcacaatgggaaagttgaattcaatgattagattaagtgaagaacatattattaacatgcactctcaacactag 50675104  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  50675103 atttttcttcacactatcttc 50675083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 187 - 304
Target Start/End: Complemental strand, 48219310 - 48219193
Alignment:
Q  187 acatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatt 286  Q
    ||||||||||||||||| |||| | ||||||||||| || |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |    
T  48219310 acatgggaaaggttaattctttctcaccatgggaaaattggattcaatgattagattaagtgatgaatatattcttaacatgctctctcaacactagact 48219211  T
Q  287 tttcttcacactatcttc 304  Q
    ||||||||||||||||||    
T  48219210 tttcttcacactatcttc 48219193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 176 - 300
Target Start/End: Original strand, 24220579 - 24220703
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||| ||||   ||||||| ||| || ||||||||||| |||||||||||| || |||||||||||||||||||||    
T  24220579 ggtgtgtgttcacatgggaaaggttaattctttcctaccatggaaaaattggattcaatgatcagattaagtgaagaacatattcttaacatgctctctc 24220678  T
Q  276 aacactaaatttttcttcacactat 300  Q
    ||||||| |||||||||||||||||    
T  24220679 aacactagatttttcttcacactat 24220703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 19556012 - 19555881
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttc---gattcaatgattagattaagtgaaaaatatattcttaacatgctct 272  Q
    |||||||||||||||| ||||||||||||||||   | |||||||||||     |||||||||||||||||||||||| || ||||||||||||||||||    
T  19556012 ggtgtgtgttcacatgagaaaggttaatcctttcccatcatgggaaagtagtaggattcaatgattagattaagtgaagaacatattcttaacatgctct 19555913  T
Q  273 ctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||| |||||||||||||||||||||    
T  19555912 ctcaacactagatttttcttcacactatcttc 19555881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 187 - 304
Target Start/End: Original strand, 32672177 - 32672294
Alignment:
Q  187 acatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatt 286  Q
    ||||||||||||||||||||||   | |||||||||||| |||| ||||||||||||||||||| || |||||||||| ||||||||||||||||| |||    
T  32672177 acatgggaaaggttaatcctttcccaacatgggaaagttggatttaatgattagattaagtgaagaacatattcttaatatgctctctcaacactagatt 32672276  T
Q  287 tttcttcacactatcttc 304  Q
    ||||||||||||||||||    
T  32672277 tttcttcacactatcttc 32672294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 42356241 - 42356364
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaacca---tgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacac 280  Q
    |||||||||||||||| ||||||||   ||||   |||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  42356241 ttcacatgggaaaggtcaatcctttcccaccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacac 42356340  T
Q  281 taaatttttcttcacactatcttc 304  Q
    || |||||||||||||||||||||    
T  42356341 tagatttttcttcacactatcttc 42356364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 31015002 - 31014882
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||| |||||||||||||||| |||   | ||| |||||||| |||||||||||||||||||||||| || ||||||||| |||||||||||||||||||    
T  31015002 ttcatatgggaaaggttaatcttttcccatcataggaaagttggattcaatgattagattaagtgaagaacatattcttaccatgctctctcaacactaa 31014903  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  31014902 atttttcttcacactatcttc 31014882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 37374828 - 37374943
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||     |  ||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  37374828 ttcacatgggaaaggttaatccttt-----cccgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 37374922  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  37374923 atttttcttcacactatcttc 37374943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 37375554 - 37375426
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||| ||||||||||||||||||||||   |||||  ||||||| ||||| |||||||||||||||||| || || ||||||||||| ||||||    
T  37375554 ggtgtgtgtttacatgggaaaggttaatcctttcccaccataagaaagttggattcgatgattagattaagtgaagaacatcttcttaacatgttctctc 37375455  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  37375454 aacactagatttttcttcacactatcttc 37375426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 49752960 - 49752868
Alignment:
Q  212 accatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  49752960 accatgggaaagttggattcaatgattagattaagtgaagaatatatttttaacatgctctctcaacactagatttttcttcacactatcttc 49752868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 187 - 304
Target Start/End: Original strand, 37373976 - 37374093
Alignment:
Q  187 acatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatt 286  Q
    |||||||||||||||||| |||   |||||||||||||| ||||||||||||| |||||||||| || |||||||||||||| | ||||||||||| |||    
T  37373976 acatgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattaaattaagtgaagaacatattcttaacatgttttctcaacactagatt 37374075  T
Q  287 tttcttcacactatcttc 304  Q
    ||||||||||||||||||    
T  37374076 tttcttcacactatcttc 37374093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 49752265 - 49752401
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatccttt----ttaacc----atgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacat 267  Q
    |||||||| ||||||||||||||||||||||||    ||  ||    ||||||||||  |||||||||||||||||||||||| || |||||||||||||    
T  49752265 ggtgtgtgatcacatgggaaaggttaatcctttattcttttcctattatgggaaagtaggattcaatgattagattaagtgaagaacatattcttaacat 49752364  T
Q  268 gctctctcaacactaaatttttcttcacactatcttc 304  Q
    ||||||||||||||| |||||||||||||||||||||    
T  49752365 gctctctcaacactagatttttcttcacactatcttc 49752401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 37374692 - 37374564
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||| ||||||||||||| ||||| | |||   | ||| |||||||| |||||||||||||||||||||||| || ||||| |||||||| ||||||    
T  37374692 ggtgtgtattcacatgggaaatgttaaccttttcccatcataggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgttctctc 37374593  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  37374592 aacactagatttttcttcacactatcttc 37374564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 47737723 - 47737631
Alignment:
Q  212 accatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||| ||| |||||||||||||||||||||||| || ||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  47737723 accatgggaatgttggattcaatgattagattaagtgaagaacatattcttatcatgctctctcaacactagatttttcttcacactatcttc 47737631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 29343041 - 29342951
Alignment:
Q  214 catgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    ||||| |||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  29343041 catggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttctgcacactatcttc 29342951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 300
Target Start/End: Original strand, 19555278 - 19555394
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||  ||||||||||| |||   | |||||||||||| |||| ||||||||||||||||||| || |||||||||||||| |||||||||||||     
T  19555278 ttcacatgaaaaaggttaatcttttcccatcatgggaaagttggattaaatgattagattaagtgaagaacatattcttaacatgttctctcaacactag 19555377  T
Q  284 atttttcttcacactat 300  Q
    |||||||||||||||||    
T  19555378 atttttcttcacactat 19555394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 38575690 - 38575600
Alignment:
Q  214 catgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    ||||| |||||| ||||||||||||| |||||||||| || ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  38575690 catggaaaagttggattcaatgattaaattaagtgaagaacatattcttaacatgctctctcaacattagatttttcttcacactatcttc 38575600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 214 - 303
Target Start/End: Original strand, 38575059 - 38575148
Alignment:
Q  214 catgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatctt 303  Q
    |||||||||||| ||||||||||||||||||| |||| || |||||||||||||| ||||||||||||| ||||||||||| ||||||||    
T  38575059 catgggaaagttggattcaatgattagattaaatgaagaacatattcttaacatgttctctcaacactagatttttcttcaaactatctt 38575148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 214 - 303
Target Start/End: Complemental strand, 43658943 - 43658854
Alignment:
Q  214 catgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatctt 303  Q
    |||||||||||| |||||||||||||||||||||||| || |||||||||||| ||||| |||||| || ||||||||||||||||||||    
T  43658943 catgggaaagttggattcaatgattagattaagtgaagaacatattcttaacaggctctttcaacattagatttttcttcacactatctt 43658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 40887975 - 40887903
Alignment:
Q  228 attcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactat 300  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||    
T  40887975 attcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactat 40887903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 32672824 - 32672741
Alignment:
Q  221 aagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    ||||| |||| ||||||||||||||| ||| || |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32672824 aagttggatttaatgattagattaagcgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttc 32672741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 50674630 - 50674752
Alignment:
Q  177 gtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctca 276  Q
    ||||||||||||||| |||||||||||| |||   |||||||||||||| ||||     ||||||||||||| | || ||||| ||| ||||||||||||    
T  50674630 gtgtgtgttcacatgagaaaggttaatcttttcccaccatgggaaagttggatt-----attagattaagtgtagaacatatttttagcatgctctctca 50674724  T
Q  277 acactaaatttttcttcacactatcttc 304  Q
    |||||| |||||||||||||||||||||    
T  50674725 acactagatttttcttcacactatcttc 50674752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 174 - 304
Target Start/End: Original strand, 47737062 - 47737191
Alignment:
Q  174 tgggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctc 273  Q
    |||||||||||| | ||||||||||||| ||||||   ||| |||| ||||| ||||||| |||||||||||||| | || |||||||||||||| ||||    
T  47737062 tgggtgtgtgttaatatgggaaaggttattcctttcccacc-tgggtaagttggattcaacgattagattaagtggagaacatattcttaacatgttctc 47737160  T
Q  274 tcaacactaaatttttcttcacactatcttc 304  Q
    |||| |||| |||||||||| ||||||||||    
T  47737161 tcaatactagatttttcttcgcactatcttc 47737191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 55282498 - 55282390
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||| | ||||||||||   |||||||||||||| |||| ||||||||||||||||||| || ||||||||||||||||| ||| ||||||     
T  55282498 ttcacatgggaa-gtttaatcctttcccaccatgggaaagttggatttaatgattagattaagtgaagaacatattcttaacatgctccctcgacactag 55282400  T
Q  284 atttttcttc 293  Q
    ||||||||||    
T  55282399 atttttcttc 55282390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 8427269 - 8427344
Alignment:
Q  229 ttcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    ||||||||||||||||| |||| || ||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  8427269 ttcaatgattagattaaatgaagaacatattcttatcatgctctctcaacactagatttttcttcacactatcttc 8427344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 304
Target Start/End: Complemental strand, 24221216 - 24221130
Alignment:
Q  218 ggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||| |||| |||||||| |||||||||| || | |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  24221216 ggaaagttggatttaatgattatattaagtgaagaacacattcttaacatgctctctcaacactagatttttcttcaaactatcttc 24221130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 302
Target Start/End: Original strand, 43103935 - 43104025
Alignment:
Q  212 accatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatct 302  Q
    ||||| |||||||| ||||||| |||| ||||||||||| || |||||||||||||||||| |||| |||| |||||||||||||||||||    
T  43103935 accataggaaagttggattcaacgattggattaagtgaataacatattcttaacatgctctttcaatactatatttttcttcacactatct 43104025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 42356843 - 42356767
Alignment:
Q  228 attcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||||||||||| |||| ||||||||| || ||| |||||||||||||| |||||||||||||||||||||    
T  42356843 attcaatgattagattaaatgaataatatattcctagcattctctctcaacactagatttttcttcacactatcttc 42356767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 176 - 250
Target Start/End: Original strand, 41459130 - 41459203
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaa 250  Q
    |||||||||||||||||||||||||||||||||   |||||| ||||||| ||||||||||||||||||||||||    
T  41459130 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgagaaagtt-gattcaatgattagattaagtgaa 41459203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 250
Target Start/End: Original strand, 43658255 - 43658328
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaa 250  Q
    ||||||||||||||||| || |||||||||||| | || ||||||||||| ||||||||||||||||||||||||    
T  43658255 ggtgtgtgttcacatggaaacggttaatcctttcttactatgggaaagtt-gattcaatgattagattaagtgaa 43658328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 3945527 - 3945467
Alignment:
Q  244 aagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    ||||||| || ||||| |||||||| ||||||||||||| |||||||||||||||||||||    
T  3945527 aagtgaagaacatatttttaacatgttctctcaacactagatttttcttcacactatcttc 3945467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 38279409 - 38279458
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagtt 225  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||    
T  38279409 ggtgtgtgttcacatgggaaaggtgaatcctttcccaccatgggaaagtt 38279458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 46187082 - 46187033
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagtt 225  Q
    |||||||||||||||||||||||| |||||||| | ||||| ||||||||    
T  46187082 ggtgtgtgttcacatgggaaaggtgaatcctttctcaccataggaaagtt 46187033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 49164730 - 49164694
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatggga 220  Q
    ||||||||||||||||||||||||||| || ||||||    
T  49164730 ttcacatgggaaaggttaatcctttttcactatggga 49164694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 6e-47; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 5523201 - 5523328
Alignment:
Q  177 gtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctca 276  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||||||| || |||||||||||||| |||||||    
T  5523201 gtgtgtgttcacatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctca 5523300  T
Q  277 acactaaatttttcttcacactatcttc 304  Q
    |||||| |||||||||||||||||||||    
T  5523301 acactagatttttcttcacactatcttc 5523328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 6032158 - 6032286
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   || ||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||||    
T  6032158 ggtgtgtgttcacatgggaaaggttaatcctttcccactatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctc 6032257  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    || |||| |||||||||||||||||||||    
T  6032258 aagactagatttttcttcacactatcttc 6032286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 30610711 - 30610839
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||| ||||||||||||||||| ||||  ||||||||||| || |||||||||||||||||||||||| || |||||||||||||||||||||    
T  30610711 ggtgtgtgttcgcatgggaaaggttaatcattttccaccatgggaaaattggattcaatgattagattaagtgaagaacatattcttaacatgctctctc 30610810  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| ||||||||| |||||||||||    
T  30610811 aacactagatttttcttgacactatcttc 30610839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 5523924 - 5523804
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||| |||   ||||| |||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||| ||||     
T  5523924 ttcacatgggaaaggttaatcttttcccaccattggaaagtttgattcaatgattagattaagtgaagaacatattcttaacatgctctctcaagactag 5523825  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  5523824 atttttcttcacactatcttc 5523804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 12809069 - 12809197
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   || || |||||||| ||| |||||||||||||||||||| || |||||||||||| | ||||||    
T  12809069 ggtgtgtgttcacatgggaaaggttaatcctttcccactataggaaagttggatgcaatgattagattaagtgaagaacatattcttaacaagttctctc 12809168  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  12809169 aacactagatttttcttcacactatcttc 12809197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 13936718 - 13936598
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   |||||||||||||| || |||||||||||||||||| || || ||||||||||||||||||||||||||||     
T  13936718 ttcacatgggaaaggttaatcctttcccaccatgggaaagttagagtcaatgattagattaagtaaagaacatattcttaacatgctctctcaacactag 13936619  T
Q  284 atttttcttcacactatcttc 304  Q
    ||||||||||||| |||||||    
T  13936618 atttttcttcacaatatcttc 13936598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 30611423 - 30611303
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||| |||| |||||||||||   |||||||||||||| ||||||||||||||||||| |||| || ||||||||||||||||||||||||||||     
T  30611423 ttcacatgagaaatgttaatcctttcccaccatgggaaagttggattcaatgattagattaactgaagaacatattcttaacatgctctctcaacactag 30611324  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  30611323 atttttcttcacactatcttc 30611303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 33668229 - 33668349
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||| |||   |||||||||||||| ||||||||||||| |||||||||| || |||||||||| |||||||||||||||||     
T  33668229 ttcacatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattaaattaagtgaagaacatattcttaatatgctctctcaacactag 33668328  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  33668329 atttttcttcacactatcttc 33668349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 6032831 - 6032711
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||| |||| ||||||||||  ||| | |||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  6032831 ttcatatggaaaaggttaattttttctcaccatgagaaagttagattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 6032732  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  6032731 atttttcttcacactatcttc 6032711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 12809780 - 12809660
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   |   |||||||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||||||     
T  12809780 ttcacatgggaaaggttaatcctttcccatggtgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttcaacactag 12809681  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  12809680 atttttcttcacactatcttc 12809660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 31723846 - 31723961
Alignment:
Q  189 atgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttt 288  Q
    ||||||||||||||||||||   ||||||||||| || |||| ||||||||||||||||||| || |||||||||||||||||||||| ||||| | |||    
T  31723846 atgggaaaggttaatcctttcctaccatgggaaatttggatttaatgattagattaagtgaagaacatattcttaacatgctctctcagcactagaattt 31723945  T
Q  289 tcttcacactatcttc 304  Q
    ||||||||||||||||    
T  31723946 tcttcacactatcttc 31723961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 180 - 304
Target Start/End: Original strand, 13944294 - 13944418
Alignment:
Q  180 tgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaaca 279  Q
    |||||||| ||||||||| |||||| |||   | ||||||||||||  |||||||||||||||||| |||| || |||||||||||||| ||||||||||    
T  13944294 tgtgttcatatgggaaagattaatcatttcccatcatgggaaagttgaattcaatgattagattaaatgaagaacatattcttaacatgatctctcaaca 13944393  T
Q  280 ctaaatttttcttcacactatcttc 304  Q
    ||| |||||||||||||||||||||    
T  13944394 ctagatttttcttcacactatcttc 13944418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 33668916 - 33668789
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||| ||||| ||||||| |||   ||||| | |||||| |||||||||||||||||||||||| |||||||| |||||||| | ||||    
T  33668916 ggtgtgtgttcacattggaaatgttaatcatttcccaccatagaaaagttggattcaatgattagattaagtgaagaatatatttttaacatg-tttctc 33668818  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  33668817 aacactagatttttcttcacactatcttc 33668789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 33648241 - 33648121
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||| ||| ||||   ||||| ||||| || ||||||||||||  |||||||||| |||||||||||||| || ||| |||||||||     
T  33648241 ttcacatgggaaaggtcaattctttcacaccataggaaaattggattcaatgattgaattaagtgaagaatatattcttaacgtgttctttcaacactag 33648142  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  33648141 atttttcttcacactatcttc 33648121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 217 - 304
Target Start/End: Complemental strand, 31724494 - 31724406
Alignment:
Q  217 gggaaagttcgattcaatgatta-gattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    ||||||||| ||||||||||||  ||||||||||| ||||||||||||||||||||| ||||||| | |||||||||||||||||||||    
T  31724494 gggaaagttggattcaatgattttgattaagtgaagaatatattcttaacatgctctttcaacacaagatttttcttcacactatcttc 31724406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 6e-44; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 175 - 297
Target Start/End: Complemental strand, 52859875 - 52859753
Alignment:
Q  175 gggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctct 274  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||  ||||||||||||||||||||||| || ||||||||||||||||||||    
T  52859875 gggtgtgtgttcacatgggaaaggttaatcctttccaaccatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgctctct 52859776  T
Q  275 caacactaaatttttcttcacac 297  Q
    |||||| | ||||||||||||||    
T  52859775 caacaccagatttttcttcacac 52859753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 43368921 - 43368793
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||| ||||   ||||||||||||||  ||||||||||||||||||||||| || |||||||||||||| ||||||    
T  43368921 ggtgtgtgttcacatgggaaaggttaattctttcccaccatgggaaagttgtattcaatgattagattaagtgaagaacatattcttaacatgttctctc 43368822  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  43368821 aacactagatttttcttcacactatcttc 43368793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 176 - 300
Target Start/End: Complemental strand, 1403773 - 1403650
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||| |||||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||||    
T  1403773 ggtgtgtgttcacataggaaaggttaatcctttcccaccatgggaaagtt-gattcaatgattagattaagtgaagaacatattcttaacatgttctctc 1403675  T
Q  276 aacactaaatttttcttcacactat 300  Q
    ||||||| |||||||||||||||||    
T  1403674 aacactagatttttcttcacactat 1403650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 6288282 - 6288162
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||||||| | |||||||  ||||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||||||    
T  6288282 ttcacatgggaaaggttaatcctttctcaccatggagaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttcaacactaa 6288183  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||| ||||||||||    
T  6288182 atttttcttcccactatcttc 6288162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 8560828 - 8560701
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   ||||||| |||||| |||||||||||||||||||||||| || |||||||||||||| ||| ||    
T  8560828 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatggaaaagtt-gattcaatgattagattaagtgaagaacatattcttaacatgttctttc 8560730  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  8560729 aacactagatttttcttcacactatcttc 8560701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 27797117 - 27797245
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    ||||||||||||||||| |||||||||||||||   |||||||||| |||  ||||||||||||||||||||||| || |||||||||||||| ||||||    
T  27797117 ggtgtgtgttcacatggaaaaggttaatcctttcccaccatgggaaggttgaattcaatgattagattaagtgaagaacatattcttaacatgatctctc 27797216  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  27797217 aacactagatttttcttcacactatcttc 27797245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 27797814 - 27797694
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||||||||  || ||||||||||| || ||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  27797814 ttcacatgggaaaggttaatccttttccactatgggaaagttagagtcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 27797715  T
Q  284 atttttcttcacactatcttc 304  Q
    ||||||||||||| |||||||    
T  27797714 atttttcttcacaatatcttc 27797694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 42839701 - 42839828
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||| || |||||||| |||||||||||| || |||||||||||||||||||||    
T  42839701 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttagagtcaatgatcagattaagtgaagaacatattcttaacatgctctctc 42839800  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    |||||||||||||| |||||| |||||||    
T  42839801 aacactaaattttt-ttcacaatatcttc 42839828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 180 - 304
Target Start/End: Original strand, 49533747 - 49533871
Alignment:
Q  180 tgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaaca 279  Q
    ||||||||||| || ||||||||||||||   |||| ||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  49533747 tgtgttcacatagggaaggttaatcctttcccaccacgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaaca 49533846  T
Q  280 ctaaatttttcttcacactatcttc 304  Q
    ||| |||||||||||||||||||||    
T  49533847 ctagatttttcttcacactatcttc 49533871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 7219733 - 7219606
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||||||||||||||   | ||||||||| || |||||||||||||||||||||||| || |||||||||||||| |||||     
T  7219733 ggtgtgtgttcacatgggaaaggttaatcctttcccatcatgggaaa-ttggattcaatgattagattaagtgaagaacatattcttaacatgttctcta 7219635  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  7219634 aacactagatttttcttcacactatcttc 7219606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 27817082 - 27816962
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||| ||||||||||||||   ||||||| |||||| |||||||||||||||||||||||| || |||||| |||||||||||||||||||||     
T  27817082 ttcacatgggtaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcctaacatgctctctcaacactag 27816983  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  27816982 atttttcttcacactatcttc 27816962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 42838945 - 42839065
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||| |||||||||||||||   |||||||||||||| || ||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  42838945 ttcacatggtaaaggttaatcctttcccaccatgggaaagttagagtcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 42839044  T
Q  284 atttttcttcacactatcttc 304  Q
    ||||||||||||| |||||||    
T  42839045 atttttcttcacaatatcttc 42839065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 49534474 - 49534354
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||||||||||||   ||||||| |||||| ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||     
T  49534474 ttcacatgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagttaaaaacatattcttatcatgctctctcaacactag 49534375  T
Q  284 atttttcttcacactatcttc 304  Q
     ||||||||||||||||||||    
T  49534374 gtttttcttcacactatcttc 49534354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 184 - 303
Target Start/End: Original strand, 1403048 - 1403167
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||| |||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||| |||| ||||     
T  1403048 ttcacatggaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttcaatactag 1403147  T
Q  284 atttttcttcacactatctt 303  Q
    ||||||||||||||||||||    
T  1403148 atttttcttcacactatctt 1403167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 184 - 303
Target Start/End: Original strand, 8560164 - 8560283
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||||||||  |||||||||| ||| ||||||| |||||||||||||||| || |||||||||||||||||| |||||||||     
T  8560164 ttcacatgggaaaggttaatccttttccaccatgggaatgttggattcaaagattagattaagtgaagaacatattcttaacatgctctttcaacactag 8560263  T
Q  284 atttttcttcacactatctt 303  Q
    ||||||||||| ||||||||    
T  8560264 atttttcttcatactatctt 8560283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 176 - 303
Target Start/End: Original strand, 41563179 - 41563306
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||| |||||||| |||||| |||||  |||||||||||||| |||||||| |||||||||| |||| ||  ||||||||||||||||||||    
T  41563179 ggtgtgtgttcatatgggaaatgttaattcttttctaccatgggaaagttggattcaattattagattaaatgaagaacgtattcttaacatgctctctc 41563278  T
Q  276 aacactaaatttttcttcacactatctt 303  Q
    ||||||| ||||||||||||||||||||    
T  41563279 aacactagatttttcttcacactatctt 41563306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 304
Target Start/End: Complemental strand, 42839620 - 42839506
Alignment:
Q  190 tgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaattttt 289  Q
    |||||||||||||||||||   ||||||||||||||  ||||||||||||||||||||||| || |||||||||||||| ||||||||||||| ||||||    
T  42839620 tgggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgatctctcaacactagattttt 42839521  T
Q  290 cttcacactatcttc 304  Q
    |||||||||||||||    
T  42839520 cttcacactatcttc 42839506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 178 - 299
Target Start/End: Original strand, 48843582 - 48843703
Alignment:
Q  178 tgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaa 277  Q
    ||||||||||||||||||||||||||| |||   ||||| |||||||| ||||||||||||| |||||||||| || |||||||||||||| ||||||||    
T  48843582 tgtgtgttcacatgggaaaggttaatcttttcacaccataggaaagttggattcaatgattatattaagtgaataacatattcttaacatgttctctcaa 48843681  T
Q  278 cactaaatttttcttcacacta 299  Q
    ||||| ||||||||||||||||    
T  48843682 cactagatttttcttcacacta 48843703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 42840399 - 42840271
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||| |||||||||||||||||| ||||  || |||||||||||  ||||||||||||||||||||||| || ||||| |||||||  ||||||    
T  42840399 ggtgtgtgtttacatgggaaaggttaatcattttccactatgggaaagttgaattcaatgattagattaagtgaagaacatatttttaacataatctctc 42840300  T
Q  276 aacactaaatttttcttcacactatcttc 304  Q
    ||||||| |||||||||||||||||||||    
T  42840299 aacactagatttttcttcacactatcttc 42840271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 175 - 304
Target Start/End: Complemental strand, 51248570 - 51248441
Alignment:
Q  175 gggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctct 274  Q
    ||||||||||||  |||||||||||||||  |||   ||||||| |||||| |||||||| ||||||||||||||| || ||||||||||||| ||||||    
T  51248570 gggtgtgtgttccaatgggaaaggttaattttttcccaccatggaaaagtttgattcaataattagattaagtgaagaacatattcttaacatactctct 51248471  T
Q  275 caacactaaatttttcttcacactatcttc 304  Q
    |||||||| |||||||||||||||||||||    
T  51248470 caacactagatttttcttcacactatcttc 51248441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 43368203 - 43368318
Alignment:
Q  189 atgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttt 288  Q
    ||||||||||||||||||||   |||||||||| ||| ||||||||||||| |||||||||| || |||||||||||||| ||||| ||||||| |||||    
T  43368203 atgggaaaggttaatcctttcccaccatgggaatgttagattcaatgattaaattaagtgaagaacatattcttaacatgttctcttaacactagatttt 43368302  T
Q  289 tcttcacactatcttc 304  Q
    ||||||||||||||||    
T  43368303 tcttcacactatcttc 43368318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 48844010 - 48843920
Alignment:
Q  214 catgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  48844010 catgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacattagatttttcttcacactatcttc 48843920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 51247866 - 51247956
Alignment:
Q  214 catgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    ||||| ||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  51247866 catggaaaaattggattcaatgattagattaagtgaagaatatattcttaacatgctctctcaacactagatttttcttcacactatcttc 51247956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 216 - 304
Target Start/End: Original strand, 7219048 - 7219136
Alignment:
Q  216 tgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  7219048 tgggaaagttggattcaatgattagattaaatgaagaatatattcttaacatgctttctcaacactagatttttcttcacactatcttc 7219136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 41563833 - 41563750
Alignment:
Q  221 aagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    ||||| |||||||| ||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41563833 aagttggattcaattattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttc 41563750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 218 - 304
Target Start/End: Original strand, 48369524 - 48369610
Alignment:
Q  218 ggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||| |||||||||||| ||||||||||| || |||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  48369524 ggaaagttggattcaatgattggattaagtgaagaacatattcttaacatgctctttcaacactagatttttcttcacactatcttc 48369610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 6287672 - 6287748
Alignment:
Q  228 attcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    ||||||||||||||||||||||| || |||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  6287672 attcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactagatttttcttcacactatcttc 6287748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 184 - 300
Target Start/End: Complemental strand, 7782769 - 7782653
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    |||||||||||||||  ||||||||   |||||||||||||| |||||||||||| ||| ||||||| || ||||||||| |||||||| |||||| ||     
T  7782769 ttcacatgggaaaggccaatcctttcctaccatgggaaagttggattcaatgattggatcaagtgaagaacatattcttatcatgctctttcaacattag 7782670  T
Q  284 atttttcttcacactat 300  Q
    |||||||||||||||||    
T  7782669 atttttcttcacactat 7782653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 185 - 304
Target Start/End: Complemental strand, 27934371 - 27934253
Alignment:
Q  185 tcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaa 284  Q
    |||||||  ||| |||||| |||||  | |||||||||||| ||| |||||||||||||||| ||| || |||||||||||||||||||||||||||| |    
T  27934371 tcacatgaaaaatgttaattcttttccaacatgggaaagttggat-caatgattagattaagagaagaacatattcttaacatgctctctcaacactaga 27934273  T
Q  285 tttttcttcacactatcttc 304  Q
    ||||||||| ||||||||||    
T  27934272 tttttcttcgcactatcttc 27934253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 300
Target Start/End: Original strand, 37725423 - 37725503
Alignment:
Q  220 aaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactat 300  Q
    |||||| |||||||| ||||||||||||||| || ||||||||||||| |||||||||||||| |||||||||||||||||    
T  37725423 aaagttggattcaatcattagattaagtgaagaacatattcttaacatactctctcaacactagatttttcttcacactat 37725503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 304
Target Start/End: Original strand, 52859189 - 52859277
Alignment:
Q  216 tgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||| ||||||||||||||||||| |||| || |||||||||||||||||||||| || || ||||||||| |||||||||||    
T  52859189 tgggaaagttagattcaatgattagattaaatgaataacatattcttaacatgctctctcatcattagatttttctttacactatcttc 52859277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 260
Target Start/End: Complemental strand, 37725705 - 37725672
Alignment:
Q  227 gattcaatgattagattaagtgaaaaatatattc 260  Q
    |||||||||||||||||||||||| |||||||||    
T  37725705 gattcaatgattagattaagtgaagaatatattc 37725672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 340
Target Start/End: Complemental strand, 1403068 - 1403040
Alignment:
Q  312 gattaaccttttccatgtgaaatgccacc 340  Q
    |||||||||||||||||||||||||||||    
T  1403068 gattaaccttttccatgtgaaatgccacc 1403040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 48620409 - 48620377
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatccttt 208  Q
    |||||||||||||||||||||||| ||||||||    
T  48620409 ggtgtgtgttcacatgggaaaggtgaatccttt 48620377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 89; Significance: 9e-43; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 11274 - 11393
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||||||||||||||| ||||  |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||     
T  11274 ttcacatgggaaaggttaatc-ttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 11372  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||||||||||||||||||    
T  11373 atttttcttcacactatcttc 11393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 176 - 300
Target Start/End: Original strand, 1485 - 1609
Alignment:
Q  176 ggtgtgtgttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctc 275  Q
    |||||||||||||||||||||| |||||| |||   ||||||| |||||| |||||||||||||||||||||||| || ||||||||| |||||||||||    
T  1485 ggtgtgtgttcacatgggaaagcttaatcatttcgcaccatggaaaagttggattcaatgattagattaagtgaataacatattcttagcatgctctctc 1584  T
Q  276 aacactaaatttttcttcacactat 300  Q
    ||||||| |||||||||||||||||    
T  1585 aacactagatttttcttcacactat 1609  T

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Target: scaffold0229 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 184 - 303
Target Start/End: Complemental strand, 15311 - 15192
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||| |||||||||||||||   |||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||| |||| ||||     
T  15311 ttcacatggaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttcaatactag 15212  T
Q  284 atttttcttcacactatctt 303  Q
    ||||||||||||||||||||    
T  15211 atttttcttcacactatctt 15192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 340
Target Start/End: Original strand, 15291 - 15319
Alignment:
Q  312 gattaaccttttccatgtgaaatgccacc 340  Q
    |||||||||||||||||||||||||||||    
T  15291 gattaaccttttccatgtgaaatgccacc 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 11862 - 11743
Alignment:
Q  184 ttcacatgggaaaggttaatcctttttaaccatgggaaagttcgattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacactaa 283  Q
    ||||||||| |||||||||||||||   |||||||||||||| || |||||||| |||||||||||| || |||||||||||||||||||||||||||||    
T  11862 ttcacatggtaaaggttaatcctttcccaccatgggaaagttagagtcaatgatcagattaagtgaagaacatattcttaacatgctctctcaacactaa 11763  T
Q  284 atttttcttcacactatcttc 304  Q
    |||||| |||||| |||||||    
T  11762 attttt-ttcacaatatcttc 11743  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 27281 - 27349
Alignment:
Q  236 attagattaagtgaaaaatatattcttaacatgctctctcaacactaaatttttcttcacactatcttc 304  Q
    |||||||||| |||  || | ||||||| ||| |||||||||||||||||| || || |||||||||||    
T  27281 attagattaaatgaggaacacattcttatcatactctctcaacactaaattattttttacactatcttc 27349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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