View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16807_high_20 (Length: 233)
Name: NF16807_high_20
Description: NF16807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16807_high_20 |
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Alignment Details
Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 17609903 - 17610123
Alignment:
| Q |
1 |
cgatataatgactttgttgatgagggaagaaactttgacagaaagtgtggcaagattttacatcgcccaaaccgatttgaccagtgtgtatattcataaa |
100 |
Q |
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| T |
17609903 |
cgatataatgactttgttgatgagggaagaaactttgacagaaagtgtggcaagattttacatcgcccaaaccgttttggccatcgagtctattcataaa |
17610002 |
T |
|
| Q |
101 |
cacaattacgttcatcggttggtattattacattttaaaatctactttcatctagtttttgtaaaccatattttgcagttataagtttcttcacgtttcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
17610003 |
cacaattacgttcatcggttggtattattacattttaaaatctactttcatctagtttttgtaaaccatattttgcagttataagtttcttcacatttcc |
17610102 |
T |
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| Q |
201 |
tcgtttcctcagggatataaa |
221 |
Q |
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||||||||||||||||||||| |
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| T |
17610103 |
tcgtttcctcagggatataaa |
17610123 |
T |
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