View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16807_low_22 (Length: 217)
Name: NF16807_low_22
Description: NF16807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16807_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 178; Significance: 3e-96; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 38286559 - 38286744
Alignment:
| Q |
14 |
cataggaggaaaactatatatcgtatatcgtgtgattggactgaggagaatcatacaattcatatttgagatcattttcaaataccaatctatcatgatc |
113 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38286559 |
catacgaggaaaactatatatcgtatatcgtgtgattggactgaggagaatcatacaattcatatttgagatcattttcaaataccaatctatcatgatc |
38286658 |
T |
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| Q |
114 |
aaccctttgctatcgtgaccctggcggtctgatgagaatatctcataatataagcaggcatattgtatgtatgtgtgtgggacaat |
199 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38286659 |
aaccctttgctatcgtgaccctggcgatctgatgagaatatctcataatataagcaggcatattgtatgtatgtgtgtgggacaat |
38286744 |
T |
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