View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16807_low_3 (Length: 534)

Name: NF16807_low_3
Description: NF16807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16807_low_3
NF16807_low_3
[»] chr6 (21 HSPs)
chr6 (136-517)||(21150056-21150423)
chr6 (31-225)||(21184040-21184235)
chr6 (360-435)||(21181559-21181634)
chr6 (219-302)||(21219957-21220041)
chr6 (131-258)||(21168767-21168894)
chr6 (121-223)||(21175998-21176101)
chr6 (341-406)||(21352233-21352299)
chr6 (112-243)||(21244958-21245090)
chr6 (378-441)||(31106485-31106548)
chr6 (362-436)||(21267154-21267228)
chr6 (363-441)||(31094768-31094846)
chr6 (344-412)||(21190469-21190538)
chr6 (362-434)||(21136783-21136855)
chr6 (313-430)||(21147277-21147401)
chr6 (367-434)||(21233462-21233530)
chr6 (352-404)||(21313062-21313114)
chr6 (118-193)||(21219876-21219951)
chr6 (313-370)||(21184371-21184429)
chr6 (345-430)||(21279840-21279926)
chr6 (472-518)||(33711900-33711946)
chr6 (135-215)||(21136547-21136627)
[»] scaffold0016 (4 HSPs)
scaffold0016 (360-517)||(65115-65275)
scaffold0016 (327-405)||(74842-74921)
scaffold0016 (112-200)||(65445-65533)
scaffold0016 (121-154)||(33523-33556)
[»] scaffold0272 (2 HSPs)
scaffold0272 (121-229)||(7987-8095)
scaffold0272 (401-441)||(3455-3495)
[»] scaffold0060 (1 HSPs)
scaffold0060 (356-416)||(20109-20168)
[»] scaffold0202 (1 HSPs)
scaffold0202 (363-441)||(3484-3562)
[»] chr8 (1 HSPs)
chr8 (375-428)||(24944361-24944414)
[»] scaffold0440 (1 HSPs)
scaffold0440 (118-186)||(989-1057)


Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-113; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 136 - 517
Target Start/End: Original strand, 21150056 - 21150423
Alignment:
Q  136 tttataggtaaattttcctatttgttgttaaagcactatcgatgtgggactattgacaccaaactctagagttctaactgagaatgtgtatatggtattc 235  Q
    ||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||||||||||||||| |  |||||||||||||||||||||| |||    
T  21150056 tttataggtaaattttcctctttgttgttaaagcatcatcgatgtgggactgttgacaccaaactctagaatcataactgagaatgtgtatatggttttc 21150155  T
Q  236 tttaaaacttcgaaccattcaataaatccaactgataaaggaatccatgatacaaataaatccaattgataaaaaacgagaaattgaggaaaaaattgag 335  Q
    |||||||| | ||||||||||||  |||||| ||||||||          | ||||||||| |||||||||||  | ||||||||||||||||| |||||    
T  21150156 tttaaaacattgaaccattcaatggatccaattgataaagt---------tgcaaataaatacaattgataaatgaagagaaattgaggaaaaagttgag 21150246  T
Q  336 gatccaaagtctaatgt-aaggaagaggagaatgatgaagatgctttattagatgcacatgaaacattgtcacatttaacataatcattttaaatacatt 434  Q
          ||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||    
T  21150247 ------aagtctaatgttaaggaagaagagaataatgaagatgctttattagatgcacatgaaacactctcacatttaacataatcaatttaaatacatt 21150340  T
Q  435 atatattaactattgatattgatttggattattaccctgtagtttatggtagtattgtttagggtattggattcactttaatc 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  21150341 atatattaactattgatattgatttggattattaccctgtagtttatggtagtattgtctatggcattggattcactttaatc 21150423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 31 - 225
Target Start/End: Original strand, 21184040 - 21184235
Alignment:
Q  31 tgcaccaaaaaatattat-aatgaaccgtttaaccaacaaattggacatcacaatgtgaattagtggcccggaacagttacattgaccacttgtatagaa 129  Q
    |||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||  ||  |||||||||    
T  21184040 tgcaccaaaaaatattattaatgaaccatttaaccaataaattggacatcacaatgtgaattactggcccggaacagttaccttgctcaaatgtatagaa 21184139  T
Q  130 gggtattttataggtaaattttcctatttgttgttaaagcactatcgatgtgggactattgacaccaaactctagagttctaactgagaatgtgta 225  Q
     ||||||||||| |||||||||||||||| |||||||||||| | | ||||| |||| |||||||||| ||||||||| |||  ||| ||||||||    
T  21184140 tggtattttataagtaaattttcctatttcttgttaaagcaccaccaatgtgagactgttgacaccaagctctagagtgctagttgataatgtgta 21184235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 360 - 435
Target Start/End: Original strand, 21181559 - 21181634
Alignment:
Q  360 aggagaatgatgaagatgctttattagatgcacatgaaacattgtcacatttaacataatcattttaaatacatta 435  Q
    |||||||| |||| |||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  21181559 aggagaataatgatgatgcttttttagatgctcatgaaacattgtcacatttaacataatcatttttaatacatta 21181634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 219 - 302
Target Start/End: Original strand, 21219957 - 21220041
Alignment:
Q  219 atgtgtatatggtattctttaaaacttcgaaccattcaataaatccaactgataaaggaatc-catgatacaaataaatccaatt 302  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||| |||||||||||||  ||| | |||||||||||||||    
T  21219957 atgtgtatatggtattctttaaaattttgaaccattcaatcaatccaattgataaaggaatctaatgttgcaaataaatccaatt 21220041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 258
Target Start/End: Original strand, 21168767 - 21168894
Alignment:
Q  131 ggtattttataggtaaattttcctatttgttgttaaagcactatcgatgtgggactattgacaccaaactctagagttctaactgagaatgtgtatatgg 230  Q
    ||||||||||||||||||||||||  | ||||||   ||||  ||||||||||||  ||||| ||||| |||||||| ||| ||||||| ||||||  ||    
T  21168767 ggtattttataggtaaattttcctcctggttgttttcgcacagtcgatgtgggaccgttgaccccaaattctagagtgctagctgagaaagtgtatccgg 21168866  T
Q  231 tattctttaaaacttcgaaccattcaat 258  Q
    ||||||||||||| | |||| |||||||    
T  21168867 tattctttaaaacattgaactattcaat 21168894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 21175998 - 21176101
Alignment:
Q  121 tgtatagaagggtattttataggtaaattttcctattt-gttgttaaagcactatcgatgtgggactattgacaccaaactctagagttctaactgagaa 219  Q
    |||||| |||| |||||||||||||||||||||| ||| ||||||  |||||  ||||||||||||||||||||||||| |  | ||| ||| |||||||    
T  21175998 tgtatacaaggatattttataggtaaattttcctcttttgttgtttcagcacagtcgatgtgggactattgacaccaaatttcatagtgctagctgagaa 21176097  T
Q  220 tgtg 223  Q
    ||||    
T  21176098 tgtg 21176101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 406
Target Start/End: Original strand, 21352233 - 21352299
Alignment:
Q  341 aaagtctaatgt-aaggaagaggagaatgatgaagatgctttattagatgcacatgaaacattgtca 406  Q
    |||||||||||| ||||||| ||||||||||||| ||| |||||||||||||||| |||||||||||    
T  21352233 aaagtctaatgttaaggaagtggagaatgatgaacatgttttattagatgcacataaaacattgtca 21352299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 21245090 - 21244958
Alignment:
Q  112 ttgaccacttgtatagaagggtattttatagg-taaattttcctatttgttgttaaagcactatcgatgtgggactattgacaccaaactctagagttct 210  Q
    ||||| || |||||| |||||| ||||||||| || || |||||  ||||| ||||||| | ||||  ||||||||||||| ||||||||| | ||| |     
T  21245090 ttgacaacatgtatacaagggtgttttatagggtatatcttcctccttgtttttaaagctcaatcggcgtgggactattgaaaccaaactccatagtgca 21244991  T
Q  211 aactgagaatgtgtatatggtattctttaaaac 243  Q
    | ||||||||||||||||  |||||||||||||    
T  21244990 agctgagaatgtgtatattctattctttaaaac 21244958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 441
Target Start/End: Complemental strand, 31106548 - 31106485
Alignment:
Q  378 ctttattagatgcacatgaaacattgtcacatttaacataatcattttaaatacattatatatt 441  Q
    |||| |||||||||||||||||| | |||||||||||| ||||||||||||| |||||| ||||    
T  31106548 cttttttagatgcacatgaaacactatcacatttaacaaaatcattttaaatgcattatgtatt 31106485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 362 - 436
Target Start/End: Original strand, 21267154 - 21267228
Alignment:
Q  362 gagaatgatgaagatgctttattagatgcacatgaaacattgtcacatttaacataatcattttaaatacattat 436  Q
    |||||||||||| ||| ||| |||||||||||| |||||  ||||| || |||||||||||||||||| ||||||    
T  21267154 gagaatgatgaaaatgattttttagatgcacataaaacaccgtcactttcaacataatcattttaaatgcattat 21267228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 31094768 - 31094846
Alignment:
Q  363 agaatgatgaagatgctttattagatgcacatgaaacattgtcacatttaacataatcattttaaatacattatatatt 441  Q
    |||||||||| ||| |||| ||||||||||||||| ||  ||| ||||||||| || ||||||||||||||||| ||||    
T  31094768 agaatgatgatgatacttttttagatgcacatgaagcaccgtcgcatttaacaaaaccattttaaatacattatgtatt 31094846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 21190469 - 21190538
Alignment:
Q  344 gtctaatgt-aaggaagaggagaatgatgaagatgctttattagatgcacatgaaacattgtcacattta 412  Q
    ||||||||| |||||||| |||||  || |||||||||| ||||||| ||||||||||||||||||||||    
T  21190469 gtctaatgttaaggaagatgagaacaattaagatgcttttttagatgaacatgaaacattgtcacattta 21190538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 434
Target Start/End: Original strand, 21136783 - 21136855
Alignment:
Q  362 gagaatgatgaagatgctttattagatgcacatgaaacattgtcacatttaacataatcattttaaatacatt 434  Q
    |||||||||||| ||||||| |||||||||||| ||||| ||||||  |||||||| | ||||||||| ||||    
T  21136783 gagaatgatgaaaatgcttttttagatgcacataaaacagtgtcactcttaacatattaattttaaatgcatt 21136855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 430
Target Start/End: Original strand, 21147277 - 21147401
Alignment:
Q  313 gagaaattgaggaaaaaattgaggatccaaagtctaatgt-aaggaagaggagaatgatgaagatg-ctttattagatgcacatg-----aaacattgtc 405  Q
    |||||||||| |||||| ||||| ||  |||||||||||| ||||||||||||||||||||  |||  ||| || ||||||||||     ||||| ||||    
T  21147277 gagaaattgacgaaaaagttgagaatagaaagtctaatgttaaggaagaggagaatgatgactatgttttttttggatgcacatgacataaaacaatgtc 21147376  T
Q  406 acatttaacataatcattttaaata 430  Q
    ||||| |||| ||||||||||||||    
T  21147377 acattaaacagaatcattttaaata 21147401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 434
Target Start/End: Original strand, 21233462 - 21233530
Alignment:
Q  367 tgatgaagatgctttatta-gatgcacatgaaacattgtcacatttaacataatcattttaaatacatt 434  Q
    ||||||||||| ||| ||| ||||| ||||||||||| |||||||||||| ||||||| |||| |||||    
T  21233462 tgatgaagatgtttttttatgatgcgcatgaaacattttcacatttaacagaatcattataaacacatt 21233530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 404
Target Start/End: Original strand, 21313062 - 21313114
Alignment:
Q  352 taaggaagaggagaatgatgaagatgctttattagatgcacatgaaacattgt 404  Q
    |||||||||||| ||||| ||||||||||  ||||||||||| ||||||||||    
T  21313062 taaggaagaggacaatgacgaagatgcttctttagatgcacacgaaacattgt 21313114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 21219876 - 21219951
Alignment:
Q  118 acttgtatagaagggtattttataggtaaattttcctatttgttgttaaagcactatcgatgtgggactattgaca 193  Q
    ||||||||| || ||||||||||| |||||| | ||| |||||||||||||||| ||  |||||| ||| ||||||    
T  21219876 acttgtatacaaaggtattttatacgtaaatctccctctttgttgttaaagcacaatttatgtggcactgttgaca 21219951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 21184371 - 21184429
Alignment:
Q  313 gagaaattgaggaaaaaattgaggatccaaagtctaatg-taaggaagaggagaatgat 370  Q
    ||||||||||||||||| ||||| ||  ||||||| ||| |||||||||||||||||||    
T  21184371 gagaaattgaggaaaaagttgagaatagaaagtctgatgttaaggaagaggagaatgat 21184429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 430
Target Start/End: Original strand, 21279840 - 21279926
Alignment:
Q  345 tctaatgtaaggaa-gaggagaatgatgaagatgctttattagatgcacatgaaacattgtcacatttaacataatcattttaaata 430  Q
    |||||||||| ||| || |||||||||||||||||||| | ||||  |||||||||  |||||| | ||| | ||||||||||||||    
T  21279840 tctaatgtaaagaaagatgagaatgatgaagatgctttttaagatatacatgaaactgtgtcacgtataatagaatcattttaaata 21279926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 472 - 518
Target Start/End: Original strand, 33711900 - 33711946
Alignment:
Q  472 tgtagtttatggtagtattgtttagggtattggattcactttaatct 518  Q
    |||| ||||||||||| ||||||| || |||||||||||||||||||    
T  33711900 tgtaatttatggtagtgttgtttatggcattggattcactttaatct 33711946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 21136547 - 21136627
Alignment:
Q  135 ttttataggtaaattttcctatttgttgttaaagcactatcgatgtgggactattgacaccaaactctagagttctaactg 215  Q
    ||||||| ||||||  |||| || |||||| |||||| | |||||||||||| || | |||||| |||||||| |||||||    
T  21136547 ttttataagtaaatcctcctcttggttgtttaagcaccaccgatgtgggactgttaaaaccaaattctagagtgctaactg 21136627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 95; Significance: 3e-46; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 360 - 517
Target Start/End: Complemental strand, 65275 - 65115
Alignment:
Q  360 aggagaatgatgaagatgctttattagatgcacatgaaacattgtcacatttaacataatcattttaaatacattatatattaactattgatattgattt 459  Q
    |||||||||||||||||||||| ||| |||||||||||||| | |||||||||||||||||||| ||||||||||||||||| || |||||||||| |||    
T  65275 aggagaatgatgaagatgcttttttaaatgcacatgaaacactatcacatttaacataatcattgtaaatacattatatatttaccattgatattgcttt 65176  T
Q  460 ggatta---ttaccctgtagtttatggtagtattgtttagggtattggattcactttaatc 517  Q
    | ||||   |||| ||||||||||||||||||||||||| || |||||||||| |||||||    
T  65175 gaattatacttactctgtagtttatggtagtattgtttatggcattggattcagtttaatc 65115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 405
Target Start/End: Complemental strand, 74921 - 74842
Alignment:
Q  327 aaaattgaggatccaaagtctaatgt-aaggaagaggagaatgatgaagatgctttattagatgcacatgaaacattgtc 405  Q
    ||||||||| ||  |||||||||||| ||||||||||||||| |||||| |||||||||||||| |||||||||||||||    
T  74921 aaaattgagaatagaaagtctaatgttaaggaagaggagaataatgaaggtgctttattagatgaacatgaaacattgtc 74842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 200
Target Start/End: Complemental strand, 65533 - 65445
Alignment:
Q  112 ttgaccacttgtatagaagggtattttataggtaaattttcctatttgttgttaaagcactatcgatgtgggactattgacaccaaact 200  Q
    |||||||| |||||  |||| | ||||||||||||||| ||||||| ||| || || ||| ||||||||||||||||||| ||||||||    
T  65533 ttgaccacatgtatgcaaggatgttttataggtaaattgtcctattggttttttaaacaccatcgatgtgggactattgaaaccaaact 65445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 154
Target Start/End: Complemental strand, 33556 - 33523
Alignment:
Q  121 tgtatagaagggtattttataggtaaattttcct 154  Q
    |||||| |||||||||||||||||||||||||||    
T  33556 tgtatacaagggtattttataggtaaattttcct 33523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 229
Target Start/End: Complemental strand, 8095 - 7987
Alignment:
Q  121 tgtatagaagggtattttataggtaaattttcctatttgttgttaaagcactatcgatgtgggactattgacaccaaactctagagttctaactgagaat 220  Q
    |||||| |||||| |||||||||||||| ||||| ||  ||||| |||  |  |||||||||||||||||  |||| |||| ||||| ||| ||||||||    
T  8095 tgtatacaagggtgttttataggtaaatcttcctcttgattgtttaagtgccgtcgatgtgggactattggaaccacactccagagtgctagctgagaat 7996  T
Q  221 gtgtatatg 229  Q
    ||| |||||    
T  7995 gtggatatg 7987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 441
Target Start/End: Complemental strand, 3495 - 3455
Alignment:
Q  401 ttgtcacatttaacataatcattttaaatacattatatatt 441  Q
    ||||||||||||||| ||||||||| |||||||||| ||||    
T  3495 ttgtcacatttaacagaatcattttgaatacattatgtatt 3455  T

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Target: scaffold0060 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 416
Target Start/End: Original strand, 20109 - 20168
Alignment:
Q  356 gaagaggagaatgatgaagatgctttattagatgcacatgaaacattgtcacatttaacat 416  Q
    ||||||||||||||||| | |||||| |||||||||||||||| |||||||||| ||||||    
T  20109 gaagaggagaatgatgatgttgcttt-ttagatgcacatgaaagattgtcacatataacat 20168  T

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Target: scaffold0202 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 3484 - 3562
Alignment:
Q  363 agaatgatgaagatgctttattagatgcacatgaaacattgtcacatttaacataatcattttaaatacattatatatt 441  Q
    ||||||| || ||| |||| ||||| ||||||||| || || ||||||||||| || ||||||||||||||||| ||||    
T  3484 agaatgacgatgatacttttttagaagcacatgaagcactgccacatttaacaaaaccattttaaatacattatgtatt 3562  T

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Target: chr8 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 428
Target Start/End: Original strand, 24944361 - 24944414
Alignment:
Q  375 atgctttattagatgcacatgaaacattgtcacatttaacataatcattttaaa 428  Q
    ||||||| | |||||||||| ||| |||||||||||||||| ||||||| ||||    
T  24944361 atgctttttcagatgcacataaaatattgtcacatttaacaaaatcattataaa 24944414  T

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Target: scaffold0440 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 989 - 1057
Alignment:
Q  118 acttgtatagaagggtattttataggtaaattttcctatttgttgttaaagcactatcgatgtgggact 186  Q
    ||||||||  ||||| ||||||||||||||| |||||  | |||||| | |||| ||||||||||||||    
T  989 acttgtatgcaagggcattttataggtaaatcttcctcatggttgttgaggcaccatcgatgtgggact 1057  T

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