View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16808_high_30 (Length: 206)
Name: NF16808_high_30
Description: NF16808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16808_high_30 |
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Alignment Details
Target: chr1 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 8280691 - 8280521
Alignment:
| Q |
14 |
agagagaagaagactgcactcaattccataaattataccaccggaatggcattattatacagactgtatgtataaaatattggtgaagcatcaaacaaaa |
113 |
Q |
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| T |
8280691 |
agagaaaagaagactgcactcaattccataaattataccaccggaatggcattattatacagactgtatgtataaaatattggtgaagcatcaaacaaaa |
8280592 |
T |
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| Q |
114 |
tactttatccattttaaaatataagcgaaaatccgaatacttcacatattattcaaatgtaacatggatgc |
184 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8280591 |
tactttatccattttaaaatataagcgaaaatccgaatacttcacatattattcaaatgtaacatggatgc |
8280521 |
T |
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