View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16809_low_34 (Length: 264)
Name: NF16809_low_34
Description: NF16809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16809_low_34 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 12 - 264
Target Start/End: Original strand, 48669259 - 48669511
Alignment:
| Q |
12 |
gagatgaatttgcgaacaagaatggaaacgaggatgacccatctccaactccaattgcaatcaacagatgaagatgaagaatggtcatcatcatcgacaa |
111 |
Q |
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| T |
48669259 |
gagatgaatttgcgaacaagaatggaaacgaggatgacccatctccaactccaattgcaatcaacagatgaagatgaagaatggtcatcatcatcgacaa |
48669358 |
T |
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| Q |
112 |
agcggtgaaagtcacgaccaagaaaagcataacggaataattctacaaaaccacccttctcaggacgcacaatcagatacctcctccactccgaatccat |
211 |
Q |
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| T |
48669359 |
agcggtcaaagtcacgaccaagaaaagcataacggaataactctacaaaaccacccttctcaggacgcacaatcagatacctcctccactccgaatccat |
48669458 |
T |
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| Q |
212 |
cacttcacatgcaaatggttggtttagtctgaaaagaaaagaaagagaggttt |
264 |
Q |
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| T |
48669459 |
cacttcacatgcaaatggttggtttagtctgaaaagaaaagaaagagaggttt |
48669511 |
T |
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