View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16810_low_2 (Length: 302)

Name: NF16810_low_2
Description: NF16810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16810_low_2
NF16810_low_2
[»] chr4 (43 HSPs)
chr4 (1-229)||(7891771-7891997)
chr4 (246-302)||(21034239-21034295)
chr4 (246-302)||(28465567-28465623)
chr4 (246-302)||(34789386-34789442)
chr4 (246-302)||(54441055-54441111)
chr4 (246-302)||(14440314-14440370)
chr4 (246-302)||(24851320-24851376)
chr4 (246-302)||(41114161-41114217)
chr4 (246-302)||(56077810-56077866)
chr4 (246-296)||(41608907-41608957)
chr4 (246-302)||(12593028-12593084)
chr4 (246-302)||(26974287-26974343)
chr4 (246-302)||(28166008-28166064)
chr4 (246-302)||(35643559-35643615)
chr4 (246-302)||(36168817-36168873)
chr4 (246-302)||(45839036-45839091)
chr4 (246-302)||(1397599-1397655)
chr4 (246-290)||(33777636-33777680)
chr4 (246-293)||(229654-229701)
chr4 (246-293)||(23986524-23986571)
chr4 (246-296)||(34789875-34789925)
chr4 (246-296)||(46737147-46737197)
chr4 (246-296)||(54440575-54440625)
chr4 (246-299)||(21034726-21034779)
chr4 (246-295)||(24336256-24336305)
chr4 (246-295)||(35193795-35193844)
chr4 (246-302)||(6616676-6616732)
chr4 (246-302)||(46736659-46736715)
chr4 (246-293)||(229165-229212)
chr4 (246-293)||(12593518-12593565)
chr4 (246-293)||(24335765-24335812)
chr4 (246-293)||(51310000-51310047)
chr4 (246-296)||(19528873-19528923)
chr4 (246-296)||(33689833-33689883)
chr4 (246-296)||(55677450-55677500)
chr4 (246-295)||(17503978-17504027)
chr4 (246-287)||(35644063-35644104)
chr4 (246-302)||(14439832-14439888)
chr4 (246-302)||(16214981-16215037)
chr4 (267-299)||(17504448-17504480)
chr4 (246-290)||(33778110-33778154)
chr4 (256-296)||(35193322-35193362)
chr4 (246-302)||(44219379-44219435)
[»] chr8 (21 HSPs)
chr8 (246-302)||(18428248-18428304)
chr8 (246-302)||(5730821-5730877)
chr8 (246-302)||(9797213-9797269)
chr8 (246-302)||(15256317-15256373)
chr8 (246-302)||(41260275-41260331)
chr8 (247-302)||(18049595-18049650)
chr8 (246-299)||(28254429-28254482)
chr8 (246-302)||(599984-600040)
chr8 (246-302)||(2208718-2208774)
chr8 (246-295)||(35426846-35426895)
chr8 (246-302)||(16578582-16578638)
chr8 (246-302)||(34799083-34799139)
chr8 (246-296)||(15255857-15255907)
chr8 (246-296)||(28254918-28254968)
chr8 (246-292)||(28877385-28877431)
chr8 (246-292)||(35427308-35427354)
chr8 (246-296)||(35694370-35694420)
chr8 (246-292)||(42035776-42035822)
chr8 (246-296)||(9796730-9796780)
chr8 (246-292)||(18805168-18805214)
chr8 (249-289)||(28876910-28876950)
[»] chr7 (32 HSPs)
chr7 (246-302)||(9181536-9181592)
chr7 (246-302)||(15712369-15712425)
chr7 (246-302)||(25637684-25637740)
chr7 (246-302)||(7732973-7733029)
chr7 (246-302)||(16917717-16917773)
chr7 (246-302)||(48248078-48248134)
chr7 (246-302)||(5745643-5745699)
chr7 (246-302)||(11971338-11971394)
chr7 (249-302)||(35160660-35160713)
chr7 (246-302)||(26026804-26026860)
chr7 (246-302)||(27245690-27245746)
chr7 (246-302)||(28687597-28687653)
chr7 (246-295)||(34595265-34595314)
chr7 (246-302)||(786786-786842)
chr7 (246-302)||(14311773-14311829)
chr7 (246-302)||(16081303-16081359)
chr7 (246-302)||(26047961-26048017)
chr7 (246-296)||(5334311-5334361)
chr7 (246-296)||(27245207-27245257)
chr7 (246-292)||(39136690-39136736)
chr7 (246-292)||(49064038-49064084)
chr7 (246-295)||(35578903-35578952)
chr7 (246-302)||(9394216-9394271)
chr7 (246-290)||(40669706-40669750)
chr7 (246-293)||(5333884-5333931)
chr7 (246-293)||(26026321-26026368)
chr7 (246-296)||(787278-787328)
chr7 (246-296)||(39388760-39388810)
chr7 (246-296)||(48247591-48247641)
chr7 (246-295)||(39137026-39137075)
chr7 (248-296)||(35161294-35161342)
chr7 (246-290)||(35579383-35579427)
[»] chr3 (47 HSPs)
chr3 (246-302)||(2051299-2051355)
chr3 (246-302)||(49951550-49951606)
chr3 (246-302)||(38535313-38535369)
chr3 (246-302)||(41998233-41998289)
chr3 (246-302)||(44676958-44677014)
chr3 (246-302)||(51473342-51473398)
chr3 (242-302)||(329846-329906)
chr3 (246-302)||(14654203-14654259)
chr3 (246-302)||(16701278-16701334)
chr3 (246-302)||(43678299-43678355)
chr3 (246-302)||(49720847-49720903)
chr3 (242-302)||(55389605-55389665)
chr3 (246-293)||(47431700-47431747)
chr3 (246-302)||(22370600-22370656)
chr3 (246-302)||(32730875-32730931)
chr3 (246-302)||(51828444-51828500)
chr3 (246-293)||(36701591-36701638)
chr3 (246-293)||(49407800-49407847)
chr3 (246-292)||(27200187-27200233)
chr3 (248-302)||(34104644-34104698)
chr3 (246-296)||(40275097-40275147)
chr3 (246-296)||(52237309-52237359)
chr3 (246-296)||(52375823-52375873)
chr3 (246-302)||(330322-330378)
chr3 (246-302)||(30513726-30513782)
chr3 (246-302)||(50662898-50662954)
chr3 (246-302)||(51829026-51829082)
chr3 (246-293)||(27199706-27199753)
chr3 (255-302)||(39010507-39010554)
chr3 (246-296)||(16689362-16689412)
chr3 (246-292)||(33412650-33412696)
chr3 (246-296)||(51827961-51828011)
chr3 (246-291)||(50901024-50901069)
chr3 (246-294)||(37076168-37076216)
chr3 (246-302)||(46013909-46013965)
chr3 (246-302)||(55390083-55390139)
chr3 (246-293)||(40838656-40838703)
chr3 (246-293)||(40839147-40839194)
chr3 (246-293)||(55192122-55192169)
chr3 (246-296)||(25534894-25534944)
chr3 (246-296)||(40275586-40275635)
chr3 (246-296)||(41998720-41998770)
chr3 (246-292)||(49408277-49408323)
chr3 (246-296)||(49720375-49720425)
chr3 (246-287)||(14654690-14654731)
chr3 (246-295)||(37075690-37075739)
chr3 (246-290)||(36701110-36701154)
[»] chr2 (35 HSPs)
chr2 (246-302)||(33921098-33921154)
chr2 (246-302)||(38008437-38008493)
chr2 (246-302)||(5560055-5560111)
chr2 (246-302)||(11539641-11539697)
chr2 (246-302)||(20127740-20127796)
chr2 (246-302)||(649823-649879)
chr2 (246-302)||(4809365-4809421)
chr2 (246-302)||(9329916-9329972)
chr2 (246-302)||(43160497-43160553)
chr2 (246-302)||(62961-63017)
chr2 (246-302)||(4356242-4356298)
chr2 (246-302)||(6949455-6949511)
chr2 (246-302)||(13315497-13315553)
chr2 (246-302)||(16952939-16952995)
chr2 (246-302)||(17060910-17060966)
chr2 (246-293)||(31797272-31797319)
chr2 (246-296)||(42192244-42192294)
chr2 (246-296)||(42192735-42192785)
chr2 (246-295)||(28143522-28143571)
chr2 (246-302)||(15551161-15551217)
chr2 (246-293)||(14942341-14942388)
chr2 (246-296)||(6949936-6949986)
chr2 (246-296)||(25336092-25336142)
chr2 (246-296)||(38007954-38008004)
chr2 (246-302)||(24140160-24140216)
chr2 (246-302)||(44219648-44219704)
chr2 (246-302)||(44220131-44220187)
chr2 (246-293)||(13399914-13399961)
chr2 (242-293)||(16175845-16175896)
chr2 (246-296)||(11540130-11540180)
chr2 (246-296)||(16953426-16953476)
chr2 (246-296)||(20128229-20128279)
chr2 (246-296)||(32418163-32418213)
chr2 (246-302)||(9329834-9329891)
chr2 (246-287)||(9330296-9330337)
[»] chr5 (18 HSPs)
chr5 (246-302)||(8419106-8419162)
chr5 (246-298)||(28290134-28290186)
chr5 (246-302)||(14340402-14340458)
chr5 (246-302)||(18149737-18149793)
chr5 (246-295)||(41834552-41834601)
chr5 (246-302)||(15029795-15029851)
chr5 (246-302)||(19291360-19291416)
chr5 (246-293)||(10721790-10721837)
chr5 (246-296)||(15115584-15115634)
chr5 (246-292)||(22651807-22651853)
chr5 (246-296)||(38900648-38900698)
chr5 (246-290)||(16752586-16752630)
chr5 (246-302)||(39083363-39083418)
chr5 (246-289)||(4966820-4966863)
chr5 (246-293)||(4967266-4967313)
chr5 (246-292)||(28494848-28494894)
chr5 (246-296)||(32697718-32697768)
chr5 (246-296)||(38901132-38901182)
[»] chr1 (33 HSPs)
chr1 (246-302)||(34555868-34555924)
chr1 (246-302)||(37505071-37505127)
chr1 (246-302)||(10279033-10279089)
chr1 (246-302)||(37421431-37421487)
chr1 (246-302)||(9992158-9992215)
chr1 (246-302)||(50305271-50305327)
chr1 (242-293)||(25274756-25274807)
chr1 (249-295)||(23526665-23526711)
chr1 (246-296)||(39485069-39485119)
chr1 (246-302)||(9992641-9992697)
chr1 (246-302)||(21938567-21938623)
chr1 (246-302)||(29439408-29439464)
chr1 (246-302)||(30787284-30787340)
chr1 (246-298)||(44582549-44582601)
chr1 (246-294)||(50926735-50926783)
chr1 (246-293)||(17088634-17088681)
chr1 (246-293)||(17641864-17641911)
chr1 (246-293)||(44802666-44802713)
chr1 (246-293)||(45048630-45048677)
chr1 (246-293)||(50304443-50304490)
chr1 (246-289)||(50926234-50926277)
chr1 (246-296)||(29438934-29438984)
chr1 (246-292)||(44291305-44291351)
chr1 (246-302)||(16299167-16299223)
chr1 (246-290)||(29021363-29021407)
chr1 (246-296)||(2868200-2868250)
chr1 (246-296)||(10278552-10278602)
chr1 (246-292)||(17088150-17088196)
chr1 (246-296)||(44582061-44582111)
chr1 (246-292)||(45048159-45048205)
chr1 (246-299)||(23340187-23340240)
chr1 (246-302)||(44954230-44954286)
chr1 (246-290)||(44954724-44954768)
[»] scaffold0097 (1 HSPs)
scaffold0097 (246-297)||(46759-46810)
[»] chr6 (17 HSPs)
chr6 (246-302)||(24640671-24640727)
chr6 (246-302)||(25472499-25472555)
chr6 (246-302)||(5114472-5114528)
chr6 (246-302)||(31573724-31573780)
chr6 (246-295)||(29891577-29891626)
chr6 (246-293)||(31073637-31073684)
chr6 (246-293)||(32836491-32836538)
chr6 (246-292)||(35163683-35163729)
chr6 (246-295)||(22534217-22534266)
chr6 (246-299)||(25468853-25468906)
chr6 (246-302)||(30251178-30251234)
chr6 (246-302)||(31073147-31073203)
chr6 (246-293)||(35163188-35163235)
chr6 (246-296)||(30250725-30250775)
chr6 (246-287)||(5120970-5121011)
chr6 (246-287)||(31574226-31574267)
chr6 (246-295)||(32836011-32836060)
[»] scaffold0712 (1 HSPs)
scaffold0712 (246-302)||(6396-6452)
[»] scaffold0709 (1 HSPs)
scaffold0709 (246-302)||(6414-6470)
[»] scaffold0007 (3 HSPs)
scaffold0007 (246-295)||(205860-205909)
scaffold0007 (246-295)||(210830-210879)
scaffold0007 (246-295)||(204932-204981)
[»] scaffold1432 (1 HSPs)
scaffold1432 (246-293)||(560-607)


Alignment Details
Target: chr4 (Bit Score: 184; Significance: 1e-99; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 7891771 - 7891997
Alignment:
Q  1 aacttcatatgaggagcttggagaagaagacatggttgagtgaagtgagtaattgtgtgtctgtgtggagtattatagacgaggatgagaagactaac-g 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    | | |    
T  7891771 aacttcatatgaggagcttggagaagaagacatggttgagtgaagtgagtaattgtgtgtctgtgtggagtattatagacgaggatgagaaattcagctg 7891870  T
Q  100 gactctttatgtttatttatcatcatcatgcttcgttattaagtcaaagtcgtctccaatcatttttccaaatactgtatttaactttcgtggcctcacc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7891871 gactctttatgtttatttatcatcatcatgcttcgttattaagtcaaagtcgtctccaatcatttttccaaatactgtacttaactttcgtggcctcacc 7891970  T
Q  200 tcttcttccacaacatctcttttgcgtatt 229  Q
       |||||||||||||||||||||||||||    
T  7891971 ---tcttccacaacatctcttttgcgtatt 7891997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 21034239 - 21034295
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21034239 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatctttt 21034295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 28465623 - 28465567
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28465623 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatctttt 28465567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 34789386 - 34789442
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34789386 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatctttt 34789442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 54441111 - 54441055
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  54441111 taattacacttttggtcctaccattttgatcagctcacgaaaatggtcctatctttt 54441055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 14440370 - 14440314
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||| ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  14440370 taattatacttttggtcctaccattttgaccaacttacgaaaatggtcctatctttt 14440314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 24851320 - 24851376
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||    
T  24851320 taattacacttttgatcctaccattttgaccaactcacgaaaatggtgctatctttt 24851376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 41114161 - 41114217
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  41114161 taatgacacttttggtcctaccattttgaccaactcacgaaaagggtcctatctttt 41114217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 56077866 - 56077810
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  56077866 taattacatttttggtcctaccattttgaccaactcacgaaaatggtcttatctttt 56077810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 41608957 - 41608907
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  41608957 taattacacttttggtcctaccattttgaccaactcacgaaattggtccta 41608907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 12593028 - 12593084
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||| || |||||    
T  12593028 taattacacttttggtcctaccagtttgaccaactcacgaaaatggtcatacctttt 12593084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 26974287 - 26974343
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||||||||||||| || | ||||||||||||||| ||||||||    
T  26974287 taattacacttttggtcctaccattttaacaaactcacgaaaatggtcatatctttt 26974343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 28166008 - 28166064
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||| | |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  28166008 taattaaatttttggtcctactattttgaccaactcacgaaaatggtcctatctttt 28166064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 35643559 - 35643615
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||| ||||| |||||| |||||||||||||| ||||||||||||||||||||||||    
T  35643559 taatcacactattggtcttaccattttgaccaactcacgaaaatggtcctatctttt 35643615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 36168873 - 36168817
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||| ||||||||||||||||||||| |||||||||||| |||||| ||||    
T  36168873 taattacactcttggtcctaccattttgaccaactcacgaaaatgatcctatttttt 36168817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 45839091 - 45839036
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||    
T  45839091 taattacacttttggtcctactattttgaccaactcacg-aaatggtcctatctttt 45839036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 1397599 - 1397655
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||| ||| ||||||||||||| ||||  ||||||||||||||||||    
T  1397599 taattacacttttgatccaaccattttgaccaactcataaaaatggtcctatctttt 1397655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 33777636 - 33777680
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatg 290  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||    
T  33777636 taattacacttttgttcctaccattttgaccaactcacgaaaatg 33777680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 229701 - 229654
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||||    
T  229701 taattacacttttggtcttcgcattttgaccagctcacgaaaatggtc 229654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 23986524 - 23986571
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||    
T  23986524 taatttcacttttggtcctcacattttgaccagctcacgaaaatggtc 23986571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 34789925 - 34789875
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||| ||||||||    
T  34789925 taattacacttttggtccttgcattttgaccaactcacgaaattggtccta 34789875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 46737197 - 46737147
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||| ||||||||    
T  46737197 taattacacttttggtccttgcattttgaccaactcacgaaattggtccta 46737147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 54440575 - 54440625
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||| ||||||||    
T  54440575 taattacacttttggtccttgcattttgaccaactcacgaaattggtccta 54440625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 21034779 - 21034726
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatct 299  Q
    |||||||| ||||||||||  ||||||||||| ||||||||| |||||||||||    
T  21034779 taattacaattttggtccttgcattttgaccaactcacgaaattggtcctatct 21034726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 24336305 - 24336256
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcct 295  Q
    |||||||||||||| ||||  ||||||||| |||||||||||||||||||    
T  24336305 taattacacttttgatcctcgcattttgacaagctcacgaaaatggtcct 24336256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 35193844 - 35193795
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcct 295  Q
    |||||||||||||||||||  ||||||||  |||||||||||||||||||    
T  35193844 taattacacttttggtccttgcattttgataagctcacgaaaatggtcct 35193795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 6616676 - 6616732
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||| ||| |||||||| || ||||||||||||||| ||| ||||    
T  6616676 taattacacttttggttctatcattttgatcaactcacgaaaatggtcttatttttt 6616732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 46736659 - 46736715
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||| ||||||||| |||| |||||||||| ||||||||||||||| ||| ||||    
T  46736659 taattatacttttggttctactattttgaccaactcacgaaaatggtcttatttttt 46736715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 229165 - 229212
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||||||||   |||||||||||||| |||||||||||    
T  229165 taattacacttttggtcctcgtattttgaccagctcgcgaaaatggtc 229212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 12593565 - 12593518
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||||||||  ||||||||||| ||||||||| |||||    
T  12593565 taattacacttttggtccttgcattttgaccaactcacgaaattggtc 12593518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 24335765 - 24335812
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||| | ||||  |||||||||||||||||||||||||||    
T  24335765 taattacactttcgatccttgcattttgaccagctcacgaaaatggtc 24335812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 51310047 - 51310000
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    ||||| |||||||||||||  |||||| ||||||||||||||||||||    
T  51310047 taattgcacttttggtcctcgcatttttaccagctcacgaaaatggtc 51310000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 19528873 - 19528923
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  |||||||||||  |||||||| ||||||||    
T  19528873 taattacacttttggtccttgcattttgaccaattcacgaaattggtccta 19528923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 33689833 - 33689883
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||| ||| ||||||||    
T  33689833 taattacacttttggtccttgcattttgaccaactcacaaaattggtccta 33689883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 55677500 - 55677450
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||   |||||||||| ||||||||| ||||||||    
T  55677500 taattacacttttggtccttgtattttgaccaactcacgaaattggtccta 55677450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 17503978 - 17504027
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcct 295  Q
    |||||| ||| ||||||||  ||||||||||| |||||||||||||||||    
T  17503978 taattatactgttggtcctcgcattttgaccatctcacgaaaatggtcct 17504027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 35644104 - 35644063
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaa 287  Q
    |||||||||||||||||||  ||||||||||| |||||||||    
T  35644104 taattacacttttggtccttgcattttgaccaactcacgaaa 35644063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 14439832 - 14439888
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||| ||||||||||  ||||||||||| ||||||||| ||||| || |||||    
T  14439832 taattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctttt 14439888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 16215037 - 16214981
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||| ||||||||||||| |||||||| || || ||||||||| || ||||||||    
T  16215037 taattatacttttggtcctatcattttgatcaacttacgaaaatgatcatatctttt 16214981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 17504480 - 17504448
Alignment:
Q  267 cattttgaccagctcacgaaaatggtcctatct 299  Q
    |||||||| ||||||||||||||||||||||||    
T  17504480 cattttgaacagctcacgaaaatggtcctatct 17504448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 33778154 - 33778110
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatg 290  Q
    ||||||||||||| || ||||||||||||| | ||||||||||||    
T  33778154 taattacacttttcgttctaccattttgactaactcacgaaaatg 33778110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 35193322 - 35193362
Alignment:
Q  256 tttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||  |||||||| |||||||||||||||||||||    
T  35193322 tttggtcctcgcattttgatcagctcacgaaaatggtccta 35193362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 44219379 - 44219435
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||   ||||| |||| ||||||||| ||||||| ||||||    
T  44219379 taattacacttttggtcctcgtattttaaccaactcacgaaattggtcctctctttt 44219435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 18428304 - 18428248
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18428304 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatctttt 18428248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 5730821 - 5730877
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  5730821 taattacacttttggtcctaccattttgaccaactcacgaaaatagtcctatctttt 5730877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 9797269 - 9797213
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  9797269 taattacacttttggtcctaccattttgaccaactcacgaaaatggttctatctttt 9797213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 15256373 - 15256317
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  15256373 taattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatctttt 15256317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 41260275 - 41260331
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  41260275 taattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatctttt 41260331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 18049595 - 18049650
Alignment:
Q  247 aattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  18049595 aattacacttttggtcctaccattttgaccaactcacgaaaatggttctatctttt 18049650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 28254429 - 28254482
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatct 299  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  28254429 taattacacttttggtcctaccattttgatcaactcacgaaaatggtcctatct 28254482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 600040 - 599984
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  600040 taattacacttttggtcctaccattttgaccaactaacgaaaatggtcatatctttt 599984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 2208718 - 2208774
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  2208718 taattacacttttgatcctaccattttgaccaactcacgaaaattgtcctatctttt 2208774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 35426846 - 35426895
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcct 295  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  35426846 taattacacttttagtcctaccattttgaccaactcacgaaaatggtcct 35426895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 16578638 - 16578582
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||  ||||||||    
T  16578638 taattacacttttggtcctaccattttgacgaactcacgaaaatggttatatctttt 16578582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 34799083 - 34799139
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||    
T  34799083 taattacacttttggtcataccattttgaccaactcatgaaaatggtcctatttttt 34799139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 15255857 - 15255907
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||| ||||||||    
T  15255857 taattacacttttggtccttgcattttgaccaactcacgaaattggtccta 15255907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 28254968 - 28254918
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||| ||||||||    
T  28254968 taattacacttttggtccttgcattttgaccaactcacgaaattggtccta 28254918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 28877431 - 28877385
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggt 292  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||    
T  28877431 taattacacttttggtcctcgcattttgaccaactcacgaaaatggt 28877385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 35427354 - 35427308
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggt 292  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||    
T  35427354 taattacacttttggtcctcgcattttgaccaactcacgaaaatggt 35427308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 35694420 - 35694370
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    ||||||||||||||||||| |||||||||| | ||||| ||||||||||||    
T  35694420 taattacacttttggtccttccattttgactaactcacaaaaatggtccta 35694370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 42035776 - 42035822
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggt 292  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||    
T  42035776 taattacacttttggtcctcacattttgaccaactcacgaaaatggt 42035822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 9796730 - 9796780
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||| ||| ||||||||    
T  9796730 taattacacttttggtccttgcattttgaccaactcacaaaattggtccta 9796780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 18805168 - 18805214
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggt 292  Q
    ||||||||||||||||||   ||||||||| ||||||||||||||||    
T  18805168 taattacacttttggtccctgcattttgacaagctcacgaaaatggt 18805214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 28876910 - 28876950
Alignment:
Q  249 ttacacttttggtcctaccattttgaccagctcacgaaaat 289  Q
    ||||||||||||||||  |||||||| ||||||||||||||    
T  28876910 ttacacttttggtcctcgcattttgatcagctcacgaaaat 28876950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 9181536 - 9181592
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9181536 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatctttt 9181592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 15712369 - 15712425
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15712369 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatctttt 15712425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 25637740 - 25637684
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25637740 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatctttt 25637684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 7733029 - 7732973
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  7733029 taattacacttttggtcctaccattttgaccaactcacgaaaatgatcctatctttt 7732973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 16917717 - 16917773
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  16917717 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatctttt 16917773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 48248134 - 48248078
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  48248134 taattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatctttt 48248078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 5745643 - 5745699
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  5745643 taattacacttttggtcctatcattttgaccaactcacgaaaatggtcatatctttt 5745699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 11971338 - 11971394
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  11971338 taattatacttttggtcctaccattttgacctactcacgaaaatggtcctatctttt 11971394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 249 - 302
Target Start/End: Original strand, 35160660 - 35160713
Alignment:
Q  249 ttacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  35160660 ttacacttttggtcctaccattttgaccaactcacgaaaatggtcatatttttt 35160713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 26026860 - 26026804
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||||||| |||||||| |  |||||||||||||||||||||||    
T  26026860 taattacacttttggtcctactattttgacaaattcacgaaaatggtcctatctttt 26026804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 27245746 - 27245690
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||| |||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  27245746 taattatacttttggtcttaccattttgatcaactcacgaaaatggtcctatctttt 27245690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 28687597 - 28687653
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||    
T  28687597 taattacacttttggtcatatcattttgaccaactcacgaaaatggttctatctttt 28687653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 34595314 - 34595265
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcct 295  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  34595314 taattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 34595265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 786786 - 786842
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||| |||| |||||||||||| ||||||||||||||| || |||||    
T  786786 taattacacttttgatccttccattttgaccaactcacgaaaatggtcatacctttt 786842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 14311829 - 14311773
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||||||    
T  14311829 taattacactttttgtcgtaccaatttgaccaactcacaaaaatggtcctatctttt 14311773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 16081303 - 16081359
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||||| | |||||||||| |||| | |||||||||||||||||    
T  16081303 taattacacttttggtccttctattttgaccaactcatggaaatggtcctatctttt 16081359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 26047961 - 26048017
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||| | ||||||||| ||||| ||||||||||||||| ||||||||    
T  26047961 taattacacttttgattctaccatttcgaccaactcacgaaaatggtcatatctttt 26048017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 5334361 - 5334311
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||||| ||||||    
T  5334361 taattacacttttggtcctcacattttgaccaactcacgaaaatagtccta 5334311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 27245207 - 27245257
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||| ||||||||    
T  27245207 taattacacttttggtccttgcattttgaccaactcacgaaattggtccta 27245257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 39136690 - 39136736
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggt 292  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||    
T  39136690 taattacacttttgatccttgcattttgaccagctcacgaaaatggt 39136736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 49064038 - 49064084
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggt 292  Q
    |||||||||||||||||||   |||||||||||||||||||||||||    
T  49064038 taattacacttttggtcctcgtattttgaccagctcacgaaaatggt 49064084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 35578903 - 35578952
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcct 295  Q
    ||||||||||||||||| |  ||||||||||||||||| |||||||||||    
T  35578903 taattacacttttggtcattgcattttgaccagctcacaaaaatggtcct 35578952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 9394271 - 9394216
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||| |  ||||||||||||||||| |||||||||||| |||||    
T  9394271 taattacacttttggtc-tcgcattttgaccagctcacaaaaatggtcctacctttt 9394216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 40669750 - 40669706
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatg 290  Q
    |||||||||||||| |||| |||||||||||| ||||||||||||    
T  40669750 taattacacttttgatccttccattttgaccaactcacgaaaatg 40669706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 5333884 - 5333931
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  5333884 taattacacttttgatccttgcattttgaccaactcacgaaaatggtc 5333931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 26026321 - 26026368
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||||||||   |||||||||||||||||||| |||||    
T  26026321 taattacacttttggtccttgtattttgaccagctcacgaaattggtc 26026368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 787328 - 787278
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||| ||   |||||||||| ||||||||||||||||||    
T  787328 taattacacttttggtgctcgtattttgaccaactcacgaaaatggtccta 787278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 39388810 - 39388760
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||| | ||||||    
T  39388810 taattacacttttggtccttgcattttgaccaactcacgaaatttgtccta 39388760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 48247591 - 48247641
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  |||||||| || ||||||||| ||||||||    
T  48247591 taattacacttttggtccttgcattttgatcaactcacgaaattggtccta 48247641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 39137075 - 39137026
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcct 295  Q
    |||||||||||||| ||||   ||||||||| ||||||||||||||||||    
T  39137075 taattacacttttgatcctcgtattttgacccgctcacgaaaatggtcct 39137026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 35161342 - 35161294
Alignment:
Q  248 attacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||  ||||||||||| |||||| || ||||||||    
T  35161342 attacacttttggtccttgcattttgaccaactcacggaattggtccta 35161294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 35579427 - 35579383
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatg 290  Q
    |||||||||||||| ||||  |||||||| |||||||||||||||    
T  35579427 taattacacttttgatcctcgcattttgatcagctcacgaaaatg 35579383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 2051299 - 2051355
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2051299 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatctttt 2051355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 49951550 - 49951606
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49951550 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatctttt 49951606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 38535313 - 38535369
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  38535313 taattacacttttggtcctaccattttgaccaactcaggaaaatggtcctatctttt 38535369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 41998233 - 41998289
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  41998233 taattacacttttggtcctaccattttgaccaactcgcgaaaatggtcctatctttt 41998289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 44677014 - 44676958
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  44677014 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatctttt 44676958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 51473398 - 51473342
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  51473398 taattacacttttgatcctaccattttgaccaactcacgaaaatggtcctatctttt 51473342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 302
Target Start/End: Original strand, 329846 - 329906
Alignment:
Q  242 ggcataattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||||| |||||    
T  329846 ggcataattacacttttggttcttccattttgaccaactcacgaaaatggtcctaactttt 329906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 14654203 - 14654259
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  14654203 taattacacttttgatactaccattttgaccaactcacgaaaatggtcctatctttt 14654259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 16701334 - 16701278
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  16701334 taattacatttttggtcctaccattttgaccaactcacgaaaatggtcatatctttt 16701278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 43678299 - 43678355
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  43678299 taattacacttttggtcctaccattttgaccaactcacgaacatggtcatatctttt 43678355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 49720903 - 49720847
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  49720903 taattacacttttggtcctactattttgaccaactcacgaaaatggtcatatctttt 49720847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 302
Target Start/End: Original strand, 55389605 - 55389665
Alignment:
Q  242 ggcataattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||||    
T  55389605 ggcataattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctacctttt 55389665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 47431700 - 47431747
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  47431700 taattacacttttggtcctaccattttgaccaactcacgaaaatggtc 47431747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 22370600 - 22370656
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||    
T  22370600 taattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctttt 22370656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 32730931 - 32730875
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||| ||||||||| |||| |||| |||||||||||||||||||    
T  32730931 taattacacttttggtcataccattttaaccaactcaagaaaatggtcctatctttt 32730875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 51828500 - 51828444
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||| ||| ||||    
T  51828500 taattacacttttggtcctaccactttgaccaactcacgaaaatggtcatatatttt 51828444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 36701638 - 36701591
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||    
T  36701638 taattacacttttggtcctcgcattttgaccagctcacgaaaatggtc 36701591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 49407800 - 49407847
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||    
T  49407800 taattacacttttggtcctcgcattttgaccagctcacgaaaatggtc 49407847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 27200233 - 27200187
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggt 292  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||    
T  27200233 taattacacttttggtccttgcattttgaccagctcacgaaaatggt 27200187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 248 - 302
Target Start/End: Original strand, 34104644 - 34104698
Alignment:
Q  248 attacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||| || ||||||||||||||| |||||||||||||| |||||||||    
T  34104644 attacactttttgttctaccattttgaccaactcacgaaaatggttctatctttt 34104698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 40275097 - 40275147
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  40275097 taattacacttttggtcctcacattttgaccaactcacgaaaatggtccta 40275147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 52237359 - 52237309
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  52237359 taattacacttttggtcctcacattttgaccaactcacgaaaatggtccta 52237309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 52375873 - 52375823
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  52375873 taattacacttttggtcctcgcattttgaccaactcacgaaaatggtccta 52375823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 330378 - 330322
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||| |||||||||  ||||||||||| |||||||||||||||||| |||||    
T  330378 taattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctacctttt 330322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 30513726 - 30513782
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||| ||||||||||  ||||||||| | ||||||||||||||||||||||||    
T  30513726 taattacatttttggtccttgcattttgacaaactcacgaaaatggtcctatctttt 30513782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 50662954 - 50662898
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||| ||||||||||||||||||||||| | ||||||||||| ||| ||||||||    
T  50662954 taattatacttttggtcctaccattttgacaaactcacgaaaatagtcatatctttt 50662898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 51829082 - 51829026
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||| ||| ||||||| || ||||||||||||||| ||||||||    
T  51829082 taattacacttttggtcatactattttgatcaactcacgaaaatggtcgtatctttt 51829026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 27199706 - 27199753
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||| ||||||||||  |||||||||||||||||||||||||||    
T  27199706 taattacatttttggtcctcgcattttgaccagctcacgaaaatggtc 27199753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 39010554 - 39010507
Alignment:
Q  255 ttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||||||    
T  39010554 ttttgatcctgccattttgaccagctcacgaaaatgatcctatctttt 39010507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 16689362 - 16689412
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||| ||||||||||| ||||||||||| ||||||||| ||||||||    
T  16689362 taattacagttttggtcctagcattttgaccaactcacgaaattggtccta 16689412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 33412696 - 33412650
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggt 292  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||    
T  33412696 taattacacttttggtcctcgcattttgatcagctcacgaaaatggt 33412650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 51827961 - 51828011
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||| ||||||||    
T  51827961 taattacacttttggtccttgcattttgaccaactcacgaaattggtccta 51828011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 50901069 - 50901024
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatgg 291  Q
    |||||||||||||||||||  ||||||||||||||||| |||||||    
T  50901069 taattacacttttggtcctcgcattttgaccagctcacaaaaatgg 50901024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 37076216 - 37076168
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcc 294  Q
    |||||||| ||||||||||  |||||||| |||||||||||||||||||    
T  37076216 taattacatttttggtcctcgcattttgatcagctcacgaaaatggtcc 37076168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 46013965 - 46013909
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||| ||| ||||||||||| ||| | |||||||| |||||||||    
T  46013965 taattacacttttggtactatcattttgaccaactcccaaaaatggttctatctttt 46013909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 55390139 - 55390083
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||  |||||| ||||  ||||||||||||||||| |||||    
T  55390139 taattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctacctttt 55390083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 40838656 - 40838703
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  40838656 taattacacttttgatcctcgcattttgaccaactcacgaaaatggtc 40838703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 40839194 - 40839147
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||||||||  ||||||||| | |||||||||||||||    
T  40839194 taattacacttttggtcctcacattttgacaaactcacgaaaatggtc 40839147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 55192122 - 55192169
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    ||||||||||||| ||||   |||||||||||||||||||||||||||    
T  55192122 taattacacttttagtccccgcattttgaccagctcacgaaaatggtc 55192169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 25534894 - 25534944
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  |||||||||||  ||| |||||||||||||    
T  25534894 taattacacttttggtcctcgcattttgaccaattcatgaaaatggtccta 25534944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 40275635 - 40275586
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| |||||| |||||||||||    
T  40275635 taattacacttttggtcctcacattttgaccaactcacg-aaatggtccta 40275586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 41998770 - 41998720
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| || |||||| ||||||||    
T  41998770 taattacacttttggtccttgcattttgaccaacttacgaaattggtccta 41998720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 49408323 - 49408277
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggt 292  Q
    |||||||||||||||| ||  ||||||||||| ||||||||||||||    
T  49408323 taattacacttttggtactcgcattttgaccatctcacgaaaatggt 49408277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 49720375 - 49720425
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||| ||||  ||||||||||| ||||||||| ||||||||    
T  49720375 taattacacttttgatccttgcattttgaccaactcacgaaattggtccta 49720425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 14654731 - 14654690
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaa 287  Q
    |||||||||||||||||||  ||||||||||| |||||||||    
T  14654731 taattacacttttggtccttgcattttgaccaactcacgaaa 14654690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 37075690 - 37075739
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcct 295  Q
    |||||||||||||||||    ||||||||||| |||||||||||||||||    
T  37075690 taattacacttttggtctccgcattttgaccaactcacgaaaatggtcct 37075739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 36701110 - 36701154
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatg 290  Q
    |||||||||||||||||||  |||||||| || ||||||||||||    
T  36701110 taattacacttttggtcctcgcattttgatcaactcacgaaaatg 36701154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 33921154 - 33921098
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33921154 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatctttt 33921098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 38008493 - 38008437
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38008493 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatctttt 38008437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 5560055 - 5560111
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  5560055 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatctttt 5560111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 11539641 - 11539697
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  11539641 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatttttt 11539697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 20127740 - 20127796
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  20127740 taattacacttttggtcctaccattttgaccaattcacgaaaatggtcctatctttt 20127796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 649879 - 649823
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  649879 taattacacttttggtcctatcattttgaccaactcacgaaaatggtcctatttttt 649823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 4809421 - 4809365
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  4809421 taattacacttttggtcctaccattttgactaactcacgaaaatggtcctatgtttt 4809365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 9329916 - 9329972
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||    
T  9329916 taattacacttttggtcctacaattttgaccaactcacaaaaatggtcctatctttt 9329972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 43160553 - 43160497
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  43160553 taattacactttaggtcctaccattttgacaaactcacgaaaatggtcctatctttt 43160497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 62961 - 63017
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||    
T  62961 taattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttt 63017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 4356298 - 4356242
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||    
T  4356298 taattacacttttggtcctatcattttgaccaactcacgataatggtcatatctttt 4356242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 6949455 - 6949511
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||| ||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  6949455 taattacatttttggtcctatcattttgactaactcacgaaaatggtcctatctttt 6949511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 13315497 - 13315553
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||||| ||||||||    
T  13315497 taattacactttttgtcctaccattttgaccaactcatgaaaatggtcatatctttt 13315553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 16952939 - 16952995
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  16952939 taattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatctttt 16952995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 17060910 - 17060966
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  17060910 taattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatctttt 17060966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 31797319 - 31797272
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||    
T  31797319 taattacacttttggtcctcacattttgaccagctcacgaaaatggtc 31797272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 42192244 - 42192294
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  42192244 taattacacttttggtcctcacattttgaccaactcacgaaaatggtccta 42192294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 42192785 - 42192735
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  42192785 taattacacttttggtcctcgcattttgaccaactcacgaaaatggtccta 42192735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 28143571 - 28143522
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcct 295  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||||    
T  28143571 taatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcct 28143522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 15551217 - 15551161
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||| |||||||||||||||| ||||| ||||||||| ||| ||||    
T  15551217 taattacacttttggccctaccattttgaccaactcacaaaaatggtcatatatttt 15551161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 14942388 - 14942341
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||||    
T  14942388 taattacacttttggtcttcgcattttgaccagctcacgaaaatggtc 14942341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 6949986 - 6949936
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||| ||||||||    
T  6949986 taattacacttttggtccttgcattttgaccaactcacgaaattggtccta 6949936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 25336142 - 25336092
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||| ||||||||    
T  25336142 taattacacttttggtccttgcattttgaccaactcacgaaattggtccta 25336092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 38007954 - 38008004
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||| ||||||||    
T  38007954 taattacacttttggtccttgcattttgaccaactcacgaaattggtccta 38008004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 24140216 - 24140160
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||| ||||  ||| ||||||| |||||||||||||||||| |||||    
T  24140216 taattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcctacctttt 24140160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 44219648 - 44219704
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||||| ||||||||| || ||||| |||||| ||||| |||||    
T  44219648 taattacacttttggtccttccattttgatcaactcacaaaaatgatcctacctttt 44219704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 44220187 - 44220131
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||| |||||  ||||||||||| ||||||||||||||| || |||||    
T  44220187 taattacactttttgtcctcgcattttgaccaactcacgaaaatggtcatacctttt 44220131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 13399961 - 13399914
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    ||||| || |||| |||||||||||||||||| |||||||||||||||    
T  13399961 taattgcaattttagtcctaccattttgaccaactcacgaaaatggtc 13399914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 16175896 - 16175845
Alignment:
Q  242 ggcataattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||||||||||||  |||||| |||| ||||||||| |||||    
T  16175896 ggcataattacacttttggtccttacatttttaccaactcacgaaattggtc 16175845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 11540180 - 11540130
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||| |||||||||| |  ||||||||||| ||||||||||||||||||    
T  11540180 taattatacttttggtcatcgcattttgaccaactcacgaaaatggtccta 11540130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 16953476 - 16953426
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| |||| |||| ||||||||    
T  16953476 taattacacttttggtccttgcattttgaccaactcatgaaattggtccta 16953426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 20128279 - 20128229
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  |||||| |||| ||||||||| ||||||||    
T  20128279 taattacacttttggtccttgcatttttaccaactcacgaaattggtccta 20128229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 32418163 - 32418213
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    ||||||||||| |||||||  ||||||||||| ||||||||| ||||||||    
T  32418163 taattacacttatggtccttgcattttgaccaactcacgaaattggtccta 32418213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 9329834 - 9329891
Alignment:
Q  246 taattacacttttggtcctaccattttga-ccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||| |||||||| | | ||||||||||||||  ||||||||    
T  9329834 taattacacttttggtcctatcattttgatctaactcacgaaaatggttatatctttt 9329891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 9330337 - 9330296
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaa 287  Q
    |||||||||||||||||||  ||||||||||| |||||||||    
T  9330337 taattacacttttggtccttgcattttgaccaactcacgaaa 9330296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 8419162 - 8419106
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  8419162 taattacacttttggtcctaccattttgaccaactcacgaatatggtcctatctttt 8419106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 28290186 - 28290134
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatc 298  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28290186 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatc 28290134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 14340402 - 14340458
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||| |||||||||||||||||||| || ||||||||||||||||||||||||    
T  14340402 taattacatttttggtcctaccattttgatcaactcacgaaaatggtcctatctttt 14340458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 18149737 - 18149793
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||    
T  18149737 taattacacttttgatcctaccatttggaccaactcacgaaaatggtcctatctttt 18149793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 41834601 - 41834552
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcct 295  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  41834601 taattacacttttggtcctcgcattttgaccagctcacgaaaatggtcct 41834552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 15029851 - 15029795
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||| || |||||    
T  15029851 taattacacttttggtcctcccattttgaccaactcacgaaaatggtcttacctttt 15029795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 19291360 - 19291416
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||||||| ||||||| || ||||| ||||||||||||||||||    
T  19291360 taattacacttttggtcctactattttgaacaactcacaaaaatggtcctatctttt 19291416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 10721790 - 10721837
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||| ||||||||||  |||||||||||||||||||||||||||    
T  10721790 taattacatttttggtcctcacattttgaccagctcacgaaaatggtc 10721837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 15115634 - 15115584
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||| ||||  ||||||||||| ||||||||||||||||||    
T  15115634 taattacacttttgatcctcacattttgaccaactcacgaaaatggtccta 15115584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 22651853 - 22651807
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggt 292  Q
    ||||||||||||| |||||  ||||||||||||||||||||||||||    
T  22651853 taattacactttttgtcctcgcattttgaccagctcacgaaaatggt 22651807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 38900648 - 38900698
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| |||||||||||| |||||    
T  38900648 taattacacttttggtcctcgcattttgaccaactcacgaaaatgatccta 38900698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 16752586 - 16752630
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatg 290  Q
    ||||||||||||||||||   ||||||||||||||||||||||||    
T  16752586 taattacacttttggtccctgcattttgaccagctcacgaaaatg 16752630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 39083363 - 39083418
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||| | ||||| ||||||||||| ||||||||||||||||||| ||||    
T  39083363 taattacacttt-gatcctatcattttgaccaactcacgaaaatggtcctatttttt 39083418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 4966820 - 4966863
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaat 289  Q
    |||||||||||||||||||  ||||||||||| |||||||||||    
T  4966820 taattacacttttggtcctcgcattttgaccaactcacgaaaat 4966863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 4967313 - 4967266
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||||||||  ||||||||||| ||||| |||||||||    
T  4967313 taattacacttttggtcctcacattttgaccaactcacaaaaatggtc 4967266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 28494848 - 28494894
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggt 292  Q
    |||||||||||||||||||  |||||||||||| ||| |||||||||    
T  28494848 taattacacttttggtccttacattttgaccagttcaggaaaatggt 28494894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 32697768 - 32697718
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    ||||||||||||||||| |  ||||||||||| ||||||||| ||||||||    
T  32697768 taattacacttttggtcattgcattttgaccaactcacgaaattggtccta 32697718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 38901182 - 38901132
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    ||||||||||||||||||| |||||||||| |   ||||||||||||||||    
T  38901182 taattacacttttggtccttccattttgactaaagcacgaaaatggtccta 38901132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 34555924 - 34555868
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  34555924 taattacacttttagtcctaccattttgaccaactcacgaaaatggtcctatctttt 34555868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 37505071 - 37505127
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  37505071 taattacacttttggtcctaccattttgaccaactcacgaaaatggttctatctttt 37505127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 10279089 - 10279033
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  10279089 taattacacttttgatcctaccgttttgaccaactcacgaaaatggtcctatctttt 10279033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 37421487 - 37421431
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||    
T  37421487 taattacacttttagtcataccattttgaccaactcacgaaaatggtcctatctttt 37421431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 9992158 - 9992215
Alignment:
Q  246 taattacacttttggtcctacca-ttttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  9992158 taattacacttttggtcctaccatttttgaccaactcacggaaatggtcctatctttt 9992215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 50305327 - 50305271
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||| |||||||||| |||| |||| |||||||||||||||||||    
T  50305327 taattacacttttggttctaccattttaaccaactcatgaaaatggtcctatctttt 50305271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 25274756 - 25274807
Alignment:
Q  242 ggcataattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||||||||    
T  25274756 ggcataattgcacttttggtcctcgcattttgaccagctcacgaaaatggtc 25274807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 23526665 - 23526711
Alignment:
Q  249 ttacacttttggtcctaccattttgaccagctcacgaaaatggtcct 295  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||    
T  23526665 ttacacttttggtcctcacattttgaccagctcacgaaaatggtcct 23526711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 39485069 - 39485119
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  39485069 taattacacttttggtcctcgcattttgactagctcacgaaaatggtccta 39485119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 9992697 - 9992641
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||  ||||||||| | |||| |||||||||||||||||||    
T  9992697 taattacacttttggtccttgcattttgacaaactcatgaaaatggtcctatctttt 9992641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 21938567 - 21938623
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||||||||||||||| ||||||||||| || |||||||||||| || ||||||||    
T  21938567 taattacacttttggtcttaccattttgatcaactcacgaaaatgatcttatctttt 21938623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 29439464 - 29439408
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||| |||||||||||| |||||||||| || |||||||||||| |||||||||||    
T  29439464 taattgcacttttggtcccaccattttgatcaactcacgaaaatgatcctatctttt 29439408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 30787340 - 30787284
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||| ||||||||||| || || ||||||||||||||| ||||||||    
T  30787340 taattacacttttgatcctaccatttagatcaactcacgaaaatggtcatatctttt 30787284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 44582601 - 44582549
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatc 298  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||| ||||    
T  44582601 taattacacttttggttctaccattttgatcaactcacgaaaatggtcatatc 44582549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 50926783 - 50926735
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcc 294  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  50926783 taattacacttttggtcatcgcattttgaccagctcacgaaaatggtcc 50926735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 17088681 - 17088634
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||||||||  |||||||| ||||||||||||||||||    
T  17088681 taattacacttttggtcctctcattttgaacagctcacgaaaatggtc 17088634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 17641911 - 17641864
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||    
T  17641911 taattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 17641864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 44802713 - 44802666
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||    
T  44802713 taattacacttttggtccttgcattttgaccagctcacgaaagtggtc 44802666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 45048677 - 45048630
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||||||||  |||||||||||| ||||||||||||||    
T  45048677 taattacacttttggtcctcgcattttgaccagttcacgaaaatggtc 45048630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 50304443 - 50304490
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||    
T  50304443 taattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 50304490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 50926234 - 50926277
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaat 289  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  50926234 taattacagttttggtcctcccattttgaccagctcacgaaaat 50926277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 29438934 - 29438984
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||| ||||||||    
T  29438934 taattacacttttggtccttgcattttgaccaactcacgaaattggtccta 29438984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 44291305 - 44291351
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggt 292  Q
    ||||| |||||||||||||  ||||||||||||||||||||||||||    
T  44291305 taattgcacttttggtcctcacattttgaccagctcacgaaaatggt 44291351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 16299223 - 16299167
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||| |||||| ||||||||||||||| || ||| ||||||||||||||| ||||    
T  16299223 taattatactttttgtcctaccattttgatcaactcgcgaaaatggtcctatttttt 16299167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 29021407 - 29021363
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatg 290  Q
    ||||| |||||||||||||  ||||||||||||||||||||||||    
T  29021407 taattgcacttttggtcctcacattttgaccagctcacgaaaatg 29021363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 2868250 - 2868200
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||| ||||  ||||||||||| | ||||||||||||||||    
T  2868250 taattacacttttgatcctcacattttgaccaacacacgaaaatggtccta 2868200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 10278552 - 10278602
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| ||||||||| || |||||    
T  10278552 taattacacttttggtccttgcattttgaccaactcacgaaattgatccta 10278602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 17088150 - 17088196
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggt 292  Q
    |||||||||| |||||| |  ||||||||||||||||||||||||||    
T  17088150 taattacactgttggtcatcgcattttgaccagctcacgaaaatggt 17088196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 44582061 - 44582111
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||||||||||||||  ||||||||||| || |||||| ||||||||    
T  44582061 taattacacttttggtccttacattttgaccaactaacgaaattggtccta 44582111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 45048159 - 45048205
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggt 292  Q
    |||||||||||||||||||  ||||||||||| || |||||||||||    
T  45048159 taattacacttttggtccttgcattttgaccaacttacgaaaatggt 45048205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 23340187 - 23340240
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatct 299  Q
    |||||||||||||| || |  ||||||||||| ||||||||| |||||||||||    
T  23340187 taattacacttttgatcattgcattttgaccaactcacgaaattggtcctatct 23340240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 44954230 - 44954286
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||| |||| ||||  |||||||||||| ||||||||||||||| || |||||    
T  44954230 taattacattttttgtccacccattttgaccaactcacgaaaatggtcatacctttt 44954286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 44954768 - 44954724
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatg 290  Q
    |||||||||||||||||||  ||||||||||| |||| |||||||    
T  44954768 taattacacttttggtcctcgcattttgaccaactcatgaaaatg 44954724  T

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Target: scaffold0097 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 46810 - 46759
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctat 297  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  46810 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcctat 46759  T

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Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 24640727 - 24640671
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||| |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  24640727 taattatacttttggtcctaccattttgatcaactcacgaaaatggtcctatctttt 24640671  T

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Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 25472555 - 25472499
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  25472555 taattacacttttgatcctaccattttgaccaactcacgaaaatggtcttatctttt 25472499  T

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Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 5114472 - 5114528
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||    
T  5114472 taattacatttttgatcctaccattttgatcaactcacgaaaatggtcctatctttt 5114528  T

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Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 31573724 - 31573780
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||| ||||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  31573724 taattatacttttggtcctaccattttgaccaactcacgaaaatagtcctatttttt 31573780  T

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Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 29891626 - 29891577
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcct 295  Q
    |||||||||||||||||||||||||||||||| |||  ||||||||||||    
T  29891626 taattacacttttggtcctaccattttgaccaactcgtgaaaatggtcct 29891577  T

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Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 31073684 - 31073637
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||    
T  31073684 taattacacttttggtccttgcattttgaccagctcacgaaattggtc 31073637  T

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Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 32836538 - 32836491
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    ||||||||||||| |||||  |||||||||||||||||||||||||||    
T  32836538 taattacacttttagtccttgcattttgaccagctcacgaaaatggtc 32836491  T

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Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 35163729 - 35163683
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggt 292  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||    
T  35163729 taattacacttttggtccccgcattttgaccagctcacgaaaatggt 35163683  T

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Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 22534266 - 22534217
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcct 295  Q
    |||||||||||||||||||   |||||||||| |||||||||||||||||    
T  22534266 taattacacttttggtcctcgtattttgaccaactcacgaaaatggtcct 22534217  T

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Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 25468853 - 25468906
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatct 299  Q
    |||||||||||||||||||  ||||||||||| ||||||||| ||||| |||||    
T  25468853 taattacacttttggtccttacattttgaccaactcacgaaattggtcatatct 25468906  T

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Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 30251234 - 30251178
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||| |||||| |||||||||| ||||| ||||| ||| ||||||||    
T  30251234 taattacacttttgatcctactattttgaccaactcacaaaaattgtcatatctttt 30251178  T

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Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 31073147 - 31073203
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    |||||||||||||||||||   |||||||||| | || |||||||||||||||||||    
T  31073147 taattacacttttggtcctttaattttgaccaacacatgaaaatggtcctatctttt 31073203  T

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Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 35163188 - 35163235
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    ||||||||||||| |||||  ||||||||||||||||| |||||||||    
T  35163188 taattacacttttagtcctcgcattttgaccagctcacaaaaatggtc 35163235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 30250725 - 30250775
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtccta 296  Q
    |||||||| ||||||||||  ||||||||||| ||||||||| ||||||||    
T  30250725 taattacaattttggtccttgcattttgaccaactcacgaaattggtccta 30250775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 5121011 - 5120970
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaa 287  Q
    |||||||||||||||||||  ||||||||||| |||||||||    
T  5121011 taattacacttttggtccttgcattttgaccaactcacgaaa 5120970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 31574267 - 31574226
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaa 287  Q
    |||||||||||||||||||  ||||||||||| |||||||||    
T  31574267 taattacacttttggtccttgcattttgaccaactcacgaaa 31574226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 32836011 - 32836060
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcct 295  Q
    |||||||||||||| ||||  ||||||||||||||||| |||| ||||||    
T  32836011 taattacacttttgatccttgcattttgaccagctcacaaaaacggtcct 32836060  T

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Target: scaffold0712 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 6396 - 6452
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||| |||||||||    
T  6396 taattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatctttt 6452  T

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Target: scaffold0709 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 6414 - 6470
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcctatctttt 302  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||| |||||||||    
T  6414 taattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatctttt 6470  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 205909 - 205860
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcct 295  Q
    ||||||||||||| |||||  ||||||||||| |||||||||||||||||    
T  205909 taattacacttttagtcctcacattttgaccaactcacgaaaatggtcct 205860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 210879 - 210830
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcct 295  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||||||    
T  210879 taattacacttttggtcctcacattttgaccaactcatgaaaatggtcct 210830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 204932 - 204981
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtcct 295  Q
    |||||||||||||||||||   ||||||||||||||||||  ||||||||    
T  204932 taattacacttttggtccttgtattttgaccagctcacgactatggtcct 204981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 607 - 560
Alignment:
Q  246 taattacacttttggtcctaccattttgaccagctcacgaaaatggtc 293  Q
    |||||||||||||| ||||  ||||||||| |||||||||||||||||    
T  607 taattacacttttgatcctcgcattttgacgagctcacgaaaatggtc 560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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