View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16813_high_22 (Length: 217)
Name: NF16813_high_22
Description: NF16813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16813_high_22 |
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Alignment Details
Target: chr8 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 24 - 199
Target Start/End: Complemental strand, 30589443 - 30589268
Alignment:
| Q |
24 |
acaacattcccactcctgctcccattaactttcggactctcccctccattccctctctcaccaaccaaacaccgagaacacgtatactgattcttaaacc |
123 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30589443 |
acaacattcccactcccgctcccattaactttcggactctcccctccattccctctctcaccaaccaaacaccgagaacacgtatactgattcttaaacc |
30589344 |
T |
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| Q |
124 |
cattttgcaaacaaggatgtttaacaactccacctaaaccaactttccctttcttaaaaacatatgcaaccgattt |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30589343 |
cattttgcaaacaaggatgtttaacaactccacctaaaccaactttccctttcttaaaaacatatgcaaccgattt |
30589268 |
T |
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