View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16813_high_4 (Length: 508)

Name: NF16813_high_4
Description: NF16813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16813_high_4
NF16813_high_4
[»] scaffold0390 (2 HSPs)
scaffold0390 (13-491)||(2578-3056)
scaffold0390 (13-491)||(15562-16040)
[»] chr2 (30 HSPs)
chr2 (13-491)||(22138208-22138686)
chr2 (101-491)||(24428859-24429244)
chr2 (101-310)||(32296025-32296227)
chr2 (106-270)||(32240500-32240661)
chr2 (101-190)||(32303738-32303827)
chr2 (13-100)||(19666576-19666663)
chr2 (16-99)||(19669222-19669305)
chr2 (13-100)||(68040-68127)
chr2 (13-88)||(9636793-9636868)
chr2 (13-87)||(23821730-23821804)
chr2 (13-87)||(23830809-23830883)
chr2 (16-100)||(43645944-43646028)
chr2 (16-98)||(25265520-25265601)
chr2 (16-100)||(24571404-24571488)
chr2 (13-88)||(6094764-6094839)
chr2 (13-88)||(24277809-24277884)
chr2 (21-88)||(24884742-24884809)
chr2 (13-88)||(19433456-19433531)
chr2 (16-100)||(25305496-25305581)
chr2 (16-68)||(24294667-24294719)
chr2 (20-88)||(25595075-25595143)
chr2 (419-483)||(32240803-32240867)
chr2 (26-88)||(16292925-16292987)
chr2 (13-71)||(33128093-33128151)
chr2 (16-100)||(31146293-31146376)
chr2 (16-49)||(3404-3437)
chr2 (25-86)||(22775331-22775392)
chr2 (25-86)||(22780709-22780770)
chr2 (243-272)||(32303694-32303723)
chr2 (16-100)||(36890798-36890881)
[»] scaffold0786 (1 HSPs)
scaffold0786 (13-491)||(4045-4523)
[»] scaffold1678 (1 HSPs)
scaffold1678 (101-278)||(103-280)
[»] chr5 (26 HSPs)
chr5 (13-100)||(23981628-23981715)
chr5 (13-100)||(19862257-19862344)
chr5 (16-93)||(23493970-23494047)
chr5 (16-100)||(7728471-7728555)
chr5 (13-88)||(29918013-29918088)
chr5 (14-100)||(6456673-6456759)
chr5 (20-88)||(24084132-24084200)
chr5 (13-88)||(21617064-21617139)
chr5 (13-88)||(26559939-26560014)
chr5 (13-88)||(37983412-37983487)
chr5 (13-87)||(22885690-22885764)
chr5 (13-88)||(21109798-21109873)
chr5 (20-100)||(3673917-3673997)
chr5 (16-100)||(5450955-5451039)
chr5 (13-100)||(432511-432598)
chr5 (13-84)||(21222736-21222807)
chr5 (13-87)||(23234610-23234684)
chr5 (19-100)||(1168317-1168397)
chr5 (20-85)||(16835426-16835491)
chr5 (25-88)||(11763629-11763692)
chr5 (25-100)||(24183245-24183319)
chr5 (26-84)||(28902252-28902310)
chr5 (26-84)||(28938647-28938705)
chr5 (19-100)||(11337299-11337379)
chr5 (13-54)||(19873892-19873933)
chr5 (25-86)||(23417301-23417362)
[»] scaffold0700 (1 HSPs)
scaffold0700 (13-88)||(2573-2648)
[»] scaffold0080 (2 HSPs)
scaffold0080 (13-84)||(43926-43997)
scaffold0080 (20-88)||(23796-23864)
[»] scaffold0028 (1 HSPs)
scaffold0028 (13-100)||(79587-79674)
[»] chr8 (33 HSPs)
chr8 (13-100)||(29306465-29306552)
chr8 (13-100)||(23226188-23226275)
chr8 (13-87)||(33611178-33611252)
chr8 (16-100)||(23158211-23158295)
chr8 (16-100)||(39446878-39446962)
chr8 (13-88)||(15933346-15933421)
chr8 (13-88)||(18261595-18261670)
chr8 (25-88)||(22742824-22742887)
chr8 (13-88)||(26011542-26011617)
chr8 (13-88)||(33528473-33528548)
chr8 (13-88)||(38635772-38635847)
chr8 (13-88)||(45559061-45559136)
chr8 (13-94)||(23151951-23152032)
chr8 (16-100)||(21198264-21198348)
chr8 (16-100)||(23837249-23837333)
chr8 (16-100)||(38533700-38533784)
chr8 (13-88)||(5854662-5854737)
chr8 (13-88)||(27233191-27233266)
chr8 (26-100)||(19331426-19331500)
chr8 (16-100)||(23149832-23149913)
chr8 (26-88)||(33172289-33172351)
chr8 (13-88)||(45465250-45465325)
chr8 (20-88)||(18041656-18041724)
chr8 (20-88)||(22497333-22497401)
chr8 (14-88)||(24552694-24552768)
chr8 (28-100)||(25296222-25296293)
chr8 (28-100)||(25758242-25758313)
chr8 (28-87)||(20709755-20709814)
chr8 (20-71)||(37653757-37653808)
chr8 (29-100)||(21681066-21681137)
chr8 (16-86)||(22735964-22736034)
chr8 (19-100)||(37611722-37611802)
chr8 (60-100)||(22981368-22981408)
[»] chr7 (41 HSPs)
chr7 (13-100)||(20583666-20583753)
chr7 (16-100)||(13274838-13274922)
chr7 (13-88)||(9611355-9611430)
chr7 (13-88)||(9838927-9839002)
chr7 (13-100)||(13863042-13863129)
chr7 (16-100)||(12248233-12248317)
chr7 (20-100)||(14940810-14940890)
chr7 (16-100)||(49047786-49047870)
chr7 (13-100)||(4484775-4484862)
chr7 (13-88)||(16915052-16915127)
chr7 (13-100)||(16919607-16919694)
chr7 (17-88)||(34241312-34241383)
chr7 (13-88)||(48356692-48356767)
chr7 (25-99)||(31501233-31501307)
chr7 (16-100)||(16570118-16570202)
chr7 (16-100)||(16595460-16595544)
chr7 (13-88)||(13448951-13449026)
chr7 (13-88)||(17947716-17947791)
chr7 (13-100)||(38424267-38424354)
chr7 (13-88)||(9723931-9724006)
chr7 (13-88)||(28390360-28390435)
chr7 (13-88)||(33559695-33559770)
chr7 (13-88)||(46474049-46474124)
chr7 (26-100)||(14935421-14935495)
chr7 (26-100)||(15363014-15363088)
chr7 (20-86)||(15368403-15368469)
chr7 (19-84)||(13377583-13377648)
chr7 (13-86)||(45149650-45149723)
chr7 (20-88)||(4446268-4446335)
chr7 (20-88)||(15358852-15358920)
chr7 (16-88)||(17224062-17224134)
chr7 (16-100)||(12369953-12370036)
chr7 (25-100)||(28722169-28722245)
chr7 (25-88)||(8267852-8267915)
chr7 (19-100)||(11287471-11287551)
chr7 (19-100)||(12759041-12759121)
chr7 (16-100)||(3049634-3049717)
chr7 (16-100)||(3895076-3895159)
chr7 (13-53)||(14272045-14272085)
chr7 (16-100)||(26070377-26070460)
chr7 (16-100)||(26094164-26094247)
[»] chr4 (29 HSPs)
chr4 (13-88)||(7964835-7964910)
chr4 (13-88)||(18238281-18238356)
chr4 (13-100)||(52265620-52265707)
chr4 (20-98)||(38764764-38764842)
chr4 (13-86)||(7185970-7186043)
chr4 (16-100)||(13809622-13809706)
chr4 (16-100)||(15044879-15044963)
chr4 (16-100)||(41166058-41166142)
chr4 (13-100)||(15013394-15013481)
chr4 (13-88)||(40905058-40905132)
chr4 (13-100)||(41256481-41256568)
chr4 (13-88)||(41916850-41916925)
chr4 (13-88)||(13590198-13590273)
chr4 (13-88)||(18276482-18276557)
chr4 (25-88)||(47468472-47468535)
chr4 (25-100)||(47535177-47535252)
chr4 (13-88)||(54398431-54398506)
chr4 (19-84)||(15109477-15109542)
chr4 (25-88)||(13442800-13442863)
chr4 (13-88)||(50220064-50220139)
chr4 (16-69)||(19821919-19821972)
chr4 (16-100)||(27961022-27961106)
chr4 (19-100)||(16732223-16732303)
chr4 (16-100)||(12837313-12837396)
chr4 (16-88)||(14901283-14901355)
chr4 (16-100)||(30232609-30232692)
chr4 (25-100)||(21959576-21959650)
chr4 (16-98)||(18494442-18494524)
chr4 (16-68)||(37957169-37957221)
[»] chr1 (21 HSPs)
chr1 (13-100)||(22143473-22143560)
chr1 (13-88)||(37233984-37234059)
chr1 (23-88)||(52400689-52400754)
chr1 (16-100)||(51627776-51627860)
chr1 (13-88)||(17608976-17609051)
chr1 (13-100)||(21195062-21195149)
chr1 (20-76)||(8538046-8538102)
chr1 (20-76)||(8603285-8603341)
chr1 (13-88)||(33397400-33397475)
chr1 (16-88)||(13376964-13377036)
chr1 (16-100)||(20177226-20177310)
chr1 (23-87)||(49997406-49997470)
chr1 (13-88)||(5768293-5768368)
chr1 (13-88)||(40436393-40436468)
chr1 (26-88)||(25093920-25093982)
chr1 (25-102)||(35522430-35522506)
chr1 (16-53)||(41229098-41229135)
chr1 (28-84)||(16645975-16646031)
chr1 (16-100)||(27329868-27329951)
chr1 (26-84)||(16656699-16656757)
chr1 (16-68)||(36356437-36356489)
[»] scaffold0123 (1 HSPs)
scaffold0123 (16-100)||(8061-8145)
[»] chr6 (25 HSPs)
chr6 (16-100)||(18398989-18399073)
chr6 (13-88)||(25651285-25651360)
chr6 (16-100)||(15079820-15079904)
chr6 (16-100)||(33324744-33324828)
chr6 (13-89)||(33538492-33538568)
chr6 (16-100)||(35136124-35136208)
chr6 (13-100)||(22361877-22361964)
chr6 (13-88)||(34966915-34966990)
chr6 (13-86)||(19854203-19854276)
chr6 (16-100)||(21623219-21623303)
chr6 (20-88)||(29605505-29605573)
chr6 (16-98)||(35009569-35009650)
chr6 (27-100)||(16887904-16887977)
chr6 (16-88)||(18381807-18381879)
chr6 (16-100)||(25367349-25367433)
chr6 (25-88)||(17083321-17083384)
chr6 (25-88)||(18629732-18629795)
chr6 (13-88)||(29160427-29160502)
chr6 (25-88)||(32352107-32352170)
chr6 (28-98)||(22848078-22848148)
chr6 (22-76)||(25919670-25919724)
chr6 (21-88)||(17557141-17557207)
chr6 (13-88)||(22462221-22462295)
chr6 (16-98)||(28195207-28195290)
chr6 (25-88)||(23222811-23222874)
[»] scaffold0253 (2 HSPs)
scaffold0253 (13-88)||(7450-7525)
scaffold0253 (13-88)||(16875-16950)
[»] scaffold0077 (1 HSPs)
scaffold0077 (13-88)||(6592-6667)
[»] scaffold0032 (1 HSPs)
scaffold0032 (13-100)||(104735-104821)
[»] chr3 (40 HSPs)
chr3 (13-100)||(9590866-9590953)
chr3 (13-100)||(11061118-11061205)
chr3 (16-100)||(14295489-14295573)
chr3 (16-100)||(14301116-14301200)
chr3 (16-100)||(14528124-14528208)
chr3 (16-100)||(17139559-17139643)
chr3 (13-98)||(14814879-14814964)
chr3 (16-100)||(11329073-11329157)
chr3 (13-88)||(12953012-12953087)
chr3 (20-86)||(33369034-33369100)
chr3 (13-87)||(34559947-34560021)
chr3 (19-100)||(14080563-14080644)
chr3 (20-88)||(4162329-4162397)
chr3 (20-88)||(6228749-6228817)
chr3 (16-100)||(16880174-16880258)
chr3 (13-100)||(3576550-3576637)
chr3 (13-88)||(17204748-17204823)
chr3 (13-100)||(39656574-39656661)
chr3 (25-88)||(41661625-41661688)
chr3 (19-100)||(17191595-17191676)
chr3 (16-100)||(12488838-12488922)
chr3 (16-100)||(12560348-12560432)
chr3 (16-100)||(14059325-14059409)
chr3 (13-88)||(31412457-31412532)
chr3 (25-88)||(43427640-43427703)
chr3 (13-76)||(50313235-50313298)
chr3 (26-88)||(11638418-11638480)
chr3 (13-86)||(1990851-1990924)
chr3 (16-68)||(38811152-38811204)
chr3 (16-100)||(55440961-55441045)
chr3 (17-100)||(54424064-54424146)
chr3 (25-86)||(38375804-38375865)
chr3 (16-100)||(17100704-17100787)
chr3 (16-100)||(17101389-17101472)
chr3 (16-88)||(47784871-47784943)
chr3 (25-88)||(10912945-10913008)
chr3 (25-100)||(12349652-12349726)
chr3 (16-71)||(15876119-15876174)
chr3 (19-100)||(17523002-17523082)
chr3 (16-100)||(38167965-38168048)
[»] scaffold0095 (1 HSPs)
scaffold0095 (16-100)||(33840-33924)
[»] scaffold0447 (2 HSPs)
scaffold0447 (13-100)||(4611-4698)
scaffold0447 (13-100)||(9225-9312)
[»] scaffold0342 (1 HSPs)
scaffold0342 (13-100)||(5988-6075)
[»] scaffold0053 (1 HSPs)
scaffold0053 (13-88)||(76971-77046)
[»] scaffold0009 (1 HSPs)
scaffold0009 (13-88)||(69505-69580)
[»] scaffold0521 (1 HSPs)
scaffold0521 (16-100)||(11145-11229)
[»] scaffold0480 (1 HSPs)
scaffold0480 (16-100)||(8994-9078)
[»] scaffold0243 (1 HSPs)
scaffold0243 (16-100)||(2428-2512)
[»] scaffold0058 (1 HSPs)
scaffold0058 (16-100)||(70418-70502)
[»] scaffold0014 (2 HSPs)
scaffold0014 (16-100)||(159350-159434)
scaffold0014 (19-100)||(85386-85466)
[»] scaffold0670 (1 HSPs)
scaffold0670 (13-88)||(7799-7874)
[»] scaffold0165 (2 HSPs)
scaffold0165 (13-88)||(30012-30087)
scaffold0165 (13-88)||(22047-22122)
[»] scaffold0006 (1 HSPs)
scaffold0006 (13-88)||(197377-197452)
[»] scaffold0970 (1 HSPs)
scaffold0970 (16-82)||(2506-2572)
[»] scaffold0021 (1 HSPs)
scaffold0021 (17-99)||(11739-11821)
[»] scaffold0025 (3 HSPs)
scaffold0025 (13-86)||(85581-85654)
scaffold0025 (17-84)||(53398-53465)
scaffold0025 (16-100)||(146652-146735)
[»] scaffold0010 (1 HSPs)
scaffold0010 (15-88)||(31070-31143)
[»] scaffold0389 (1 HSPs)
scaffold0389 (16-100)||(10713-10797)
[»] scaffold0383 (1 HSPs)
scaffold0383 (13-100)||(7219-7307)
[»] scaffold0598 (1 HSPs)
scaffold0598 (13-88)||(3300-3374)
[»] scaffold0151 (1 HSPs)
scaffold0151 (13-100)||(22534-22621)
[»] scaffold0148 (1 HSPs)
scaffold0148 (13-88)||(37606-37681)
[»] scaffold0125 (1 HSPs)
scaffold0125 (16-95)||(41700-41778)
[»] scaffold0031 (2 HSPs)
scaffold0031 (13-88)||(97322-97397)
scaffold0031 (28-100)||(70676-70748)
[»] scaffold0004 (2 HSPs)
scaffold0004 (13-88)||(27545-27620)
scaffold0004 (13-88)||(86405-86480)
[»] scaffold1272 (1 HSPs)
scaffold1272 (16-98)||(360-442)
[»] scaffold0132 (1 HSPs)
scaffold0132 (16-86)||(13558-13628)
[»] scaffold0554 (1 HSPs)
scaffold0554 (19-100)||(1970-2050)
[»] scaffold0193 (1 HSPs)
scaffold0193 (20-88)||(4660-4728)
[»] scaffold0150 (1 HSPs)
scaffold0150 (16-100)||(28587-28671)
[»] scaffold0092 (1 HSPs)
scaffold0092 (16-100)||(3370-3454)
[»] scaffold0022 (4 HSPs)
scaffold0022 (16-100)||(103034-103118)
scaffold0022 (16-100)||(109641-109725)
scaffold0022 (25-88)||(68082-68145)
scaffold0022 (20-68)||(131891-131939)
[»] scaffold0456 (2 HSPs)
scaffold0456 (25-100)||(1658-1733)
scaffold0456 (25-100)||(8803-8878)
[»] scaffold0406 (1 HSPs)
scaffold0406 (25-88)||(14096-14159)
[»] scaffold0162 (2 HSPs)
scaffold0162 (13-100)||(7137-7224)
scaffold0162 (16-72)||(8332-8388)
[»] scaffold0018 (1 HSPs)
scaffold0018 (27-98)||(51312-51382)
[»] scaffold0367 (1 HSPs)
scaffold0367 (13-71)||(17462-17520)
[»] scaffold0138 (1 HSPs)
scaffold0138 (42-100)||(22541-22599)
[»] scaffold0023 (1 HSPs)
scaffold0023 (13-71)||(61375-61433)
[»] scaffold0120 (1 HSPs)
scaffold0120 (19-100)||(21566-21646)
[»] scaffold0103 (1 HSPs)
scaffold0103 (13-86)||(33710-33783)
[»] scaffold0601 (1 HSPs)
scaffold0601 (25-88)||(998-1061)
[»] scaffold0034 (2 HSPs)
scaffold0034 (13-100)||(46213-46299)
scaffold0034 (13-100)||(40706-40792)
[»] scaffold0610 (1 HSPs)
scaffold0610 (19-100)||(689-769)
[»] scaffold0153 (1 HSPs)
scaffold0153 (13-65)||(1882-1934)
[»] scaffold0037 (1 HSPs)
scaffold0037 (16-100)||(24841-24924)
[»] scaffold0020 (1 HSPs)
scaffold0020 (20-88)||(108065-108132)
[»] scaffold0013 (1 HSPs)
scaffold0013 (16-88)||(35529-35601)
[»] scaffold1867 (1 HSPs)
scaffold1867 (25-100)||(204-278)
[»] scaffold0387 (1 HSPs)
scaffold0387 (20-51)||(1107-1138)
[»] scaffold0190 (1 HSPs)
scaffold0190 (25-100)||(9997-10071)
[»] scaffold0026 (1 HSPs)
scaffold0026 (25-100)||(89975-90050)
[»] scaffold0483 (1 HSPs)
scaffold0483 (16-98)||(6712-6794)
[»] scaffold0396 (1 HSPs)
scaffold0396 (19-100)||(11821-11901)
[»] scaffold0195 (1 HSPs)
scaffold0195 (19-100)||(631-711)
[»] scaffold0075 (1 HSPs)
scaffold0075 (19-100)||(4995-5075)
[»] scaffold0035 (1 HSPs)
scaffold0035 (19-100)||(118076-118156)


Alignment Details
Target: scaffold0390 (Bit Score: 447; Significance: 0; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 447; E-Value: 0
Query Start/End: Original strand, 13 - 491
Target Start/End: Complemental strand, 3056 - 2578
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcatacaatgaacatga 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3056 aatatcacttagcaacaacaacatcaattaaacatggttctcttcataattcaaaaacatcatagcataattcaaccaattgagcatacaatgaacatga 2957  T
Q  113 gtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacatgtcaattgtgccaatagaattttcacaacat 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2956 gtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacaggtcaattgtgccaatagaattttcacaacat 2857  T
Q  213 taagtggcttttattttatttttcatttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaaacccaactcatt 312  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2856 taagtggcttttattttatttttcgtttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaaacccaactcatt 2757  T
Q  313 cgcaagcttgtaacattcctcatcaattgtcttggtcctgaatgcaaggggtttaacaacacgaaccacgcgaacgacaccctccatcttggtggggaca 412  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2756 ggcaagcttgtaacattcctcatcaattgtcttggtcctgaatgcaaggggtttaacaacacgaaccacgcgaacgacaccctccatcttggtggggaca 2657  T
Q  413 atcatgttgttctccataaacgttgtacatgtaccctttctatttacgggtttcaccatgcaaacctcttcctcatgat 491  Q
    || ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2656 atgatgttgttctccataaatgttgtacatgtaccctttgtatttacgggtttcaccatgcaaacctcttcctcatgat 2578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 13 - 491
Target Start/End: Complemental strand, 16040 - 15562
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcatacaatgaacatga 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16040 aatatcacttagcaacaacaacatcaattaaacatggttctcttcataattcaaaaacatcatagcataattcaaccaattgagcatacaatgaacatga 15941  T
Q  113 gtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacatgtcaattgtgccaatagaattttcacaacat 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15940 gtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacaggtcaattgtgccaatagaattttcacaacat 15841  T
Q  213 taagtggcttttattttatttttcatttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaaacccaactcatt 312  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15840 taagtggcttttattttatttttcgtttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaaacccaactcatt 15741  T
Q  313 cgcaagcttgtaacattcctcatcaattgtcttggtcctgaatgcaaggggtttaacaacacgaaccacgcgaacgacaccctccatcttggtggggaca 412  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15740 ggcaagcttgtaacattcctcatcaattgtcttggtcctgaatgcaaggggtttaacaacacgaaccacgcgaacgacaccctccatcttggtcgggaca 15641  T
Q  413 atcatgttgttctccataaacgttgtacatgtaccctttctatttacgggtttcaccatgcaaacctcttcctcatgat 491  Q
    || ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15640 atgatgttgttctccataaatgttgtacatgtaccctttgtatttacgggtttcaccatgcaaacctcttcctcatgat 15562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 443; Significance: 0; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 13 - 491
Target Start/End: Original strand, 22138208 - 22138686
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcatacaatgaacatga 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22138208 aatatcacttagcaacaacaacatcaattaaacatggttctcttcataattcaaaaacatcatagcataattcaaccaattgagcatacaatgaacatga 22138307  T
Q  113 gtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacatgtcaattgtgccaatagaattttcacaacat 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22138308 gtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacaggtcaattgtgccaatagaattttcacaacat 22138407  T
Q  213 taagtggcttttattttatttttcatttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaaacccaactcatt 312  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22138408 taagtggcttttattttatttttcgtttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaaacccaactcatt 22138507  T
Q  313 cgcaagcttgtaacattcctcatcaattgtcttggtcctgaatgcaaggggtttaacaacacgaaccacgcgaacgacaccctccatcttggtggggaca 412  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22138508 ggcaagcttgtaacattcctcatcaattgtcttggtcctgaatgcaaggggtttaacaacacgaaccacgcgaacgacaccctccatcttggtcgggaca 22138607  T
Q  413 atcatgttgttctccataaacgttgtacatgtaccctttctatttacgggtttcaccatgcaaacctcttcctcatgat 491  Q
    || ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22138608 atgatgttgttctccataaatgttgtacatgtaccctttgtatttacgggtttcaccatgcaaacctcttcctcatgat 22138686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 101 - 491
Target Start/End: Original strand, 24428859 - 24429244
Alignment:
Q  101 caatgaacatgagtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacatgtcaattgtgccaatagaa 200  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||    |||||||||||||    
T  24428859 caatgaacatgagtttgtatagttaggcataataaccaacaaaacatttttgcagagaaataataatttaaacagatacaggt----tgtgccaatagaa 24428954  T
Q  201 ttttcacaacattaagtggcttttattttatttttcatttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaa 300  Q
    |||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||| ||||| ||       |||||||| |||||||||    
T  24428955 ttttcacaacattaagtgacttttattttatttttcgtttaggattaatgaataagttgaatgattatttaatca-------atcatcaagcttgtccaa 24429047  T
Q  301 acccaactcattcgcaagcttgtaacattcctcatcaattgtcttggtcctgaatgcaaggggtttaacaacacgaaccacgcgaacgac-accctccat 399  Q
    ||||||||| ||  ||||||| | ||||||   ||||||  ||||    || |||  |||||| ||||||| |||||||| | |||  || |||| |  |    
T  24429048 acccaactcttttacaagcttttcacattcaggatcaatactcttttctctaaatataaggggattaacaatacgaaccaag-gaatcacgacccacgtt 24429146  T
Q  400 cttggtggggacaatcatg------ttgttctccataaacgttgtacatgtaccctttctatttacgggtttcaccatgcaaacctcttcctcatgat 491  Q
    |||||||||||||||||||      |||||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||| |||||||| ||||    
T  24429147 cttggtggggacaatcatgtcggatttgttctccataaaccctgtacatgtaccctttgtattttcgggtttcaccatgcaaacgtcttcctcgtgat 24429244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 101 - 310
Target Start/End: Complemental strand, 32296227 - 32296025
Alignment:
Q  101 caatgaacatgagtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacatgtcaattgtgccaatagaa 200  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||    
T  32296227 caataaacatgattttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacagatacaggtcaattgtgccaatataa 32296128  T
Q  201 ttttcacaacattaagtggcttttattttatttttcatttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaa 300  Q
     ||||||||||||||||||||||||||||||||||   ||| | |||||||||||||||||||||||||||| ||       |||||||| |||||||||    
T  32296127 atttcacaacattaagtggcttttattttattttttgattaggtttaatgaataagttgaatgattgtttaatca-------atcatcaagcttgtccaa 32296035  T
Q  301 acccaactca 310  Q
    ||||||||||    
T  32296034 acccaactca 32296025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 106 - 270
Target Start/End: Original strand, 32240500 - 32240661
Alignment:
Q  106 aacatgagtttgtatagttacacataataaccaacaacacatttttgcagagaaataa-taatttaaacatatacatgtcaattgtgccaatagaatttt 204  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||    ||| |||||||||||||    
T  32240500 aacaagagtttgtatagttacacataataaccaataacacatttttgcagagaaataaataatttaaacagatacaggt----tgtaccaatagaatttt 32240595  T
Q  205 cacaacattaagtggcttttattttatttttcatttacgattaatgaataagttgaatgattgttt 270  Q
    |||||||||||||||| ||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  32240596 cacaacattaagtggcctttattttatttttcgtttaggattaacgaataagttgaatgattgttt 32240661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 101 - 190
Target Start/End: Complemental strand, 32303827 - 32303738
Alignment:
Q  101 caatgaacatgagtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacatgtcaattgt 190  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||  ||||||||||||||    
T  32303827 caatgaacatgagtttttatagttacatataataaccaacaacacatttttgcagagaaataatggtttaaacagttacatgtcaattgt 32303738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 19666576 - 19666663
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||||||||| |||||| ||||| ||||||||||| |||| |||||||||||||||||| |||||||||    
T  19666576 aatatcacttagcaacaacaacatcaattgaacatggttctcatcataattcaataacaacatagcataattcaaccatttgagcata 19666663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 19669305 - 19669222
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcat 99  Q
    |||||||||||||||||||||||||| |||||| ||| | |||||||||||||||| |||| |||||||||||||||| |||||    
T  19669305 atcacttagcaacaacaacatcaattgaacatggttcacatcataattcaacaacaacatatcataattcaaccaattaagcat 19669222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 68040 - 68127
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||   || |||||||||||| |||||||||||||||| | |||||||||    
T  68040 aatatcacttagcaacaacaacatcaattgaacatgaatcttaccacaattcaacaacaacatagcataattcaacaatttgagcata 68127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 9636793 - 9636868
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  9636793 aatatctcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaac 9636868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 23821804 - 23821730
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaa 87  Q
    ||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||| | ||||||| |||||||    
T  23821804 aatatcacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaataacatagcacaattcaa 23821730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 23830883 - 23830809
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaa 87  Q
    ||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||| | ||||||| |||||||    
T  23830883 aatatcacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaataacatagcacaattcaa 23830809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 43645944 - 43646028
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| |||||||||||   || | |||||||||| |||||||||||||||| | |||||||||    
T  43645944 atcacttagcaacaacaacatcaattgaacatgattcttaccacagttcaacaacaacatagcataattcaacaatttgagcata 43646028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 25265601 - 25265520
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 98  Q
    |||| ||| ||||||||||||||||| |||||| ||||| |||||||||||||||| ||||||| ||||| ||||||||||||    
T  25265601 atcaattaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattc-accaattgagca 25265520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 24571488 - 24571404
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||| ||||||||||||||||| | ||||| |||   || |||||||||| | ||||||||||||||||||||||||||||    
T  24571488 atcacttaacaacaacaacatcaattgatcatgaatcttaacacaattcaacaaaaacatagcataattcaaccaattgagcata 24571404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 6094764 - 6094839
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| || ||||||||| |||| || ||||||||    
T  6094764 aatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacataacacaattcaac 6094839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 24277809 - 24277884
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||| ||||||||||||||| ||| |||||||||||| |||| || ||||||||    
T  24277809 aatatctcttaacaacaacaacatcatttaaacatgattctcatcacaattcaacaacaacataacacaattcaac 24277884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 24884742 - 24884809
Alignment:
Q  21 ttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||||||| | ||||||| ||||||||    
T  24884742 ttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaataacatagcacaattcaac 24884809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 19433531 - 19433456
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||||||||||||||||||||| |||||||||||    | ||||||| |||| ||||||||||||||||    
T  19433531 aatatctcttagcaacaacaacatcaattgaacatgattcttacaacaattcaataacaacatagcataattcaac 19433456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 25305496 - 25305581
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaa-catcatagcataattcaaccaattgagcata 100  Q
    |||||||||| ||||||||||||||| ||||||| |||   || |||||||||| || |||||||||||||||| | |||||||||    
T  25305496 atcacttagccacaacaacatcaattgaacatgactcttaccacaattcaacaatcaacatagcataattcaacaatttgagcata 25305581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 24294719 - 24294667
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaaca 68  Q
    |||||||||||||||||||||||||| ||||||| ||||  ||||||||||||    
T  24294719 atcacttagcaacaacaacatcaattgaacatgaatctcagcataattcaaca 24294667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 25595075 - 25595143
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||| ||||||||||||||||||||||||| |||| ||| || |||| |||| ||||||| ||||||||    
T  25595075 cttaacaacaacaacatcaattaaacatgaatctcatcacaaatcaaaaacaacatagcacaattcaac 25595143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 483
Target Start/End: Original strand, 32240803 - 32240867
Alignment:
Q  419 ttgttctccataaacgttgtacatgtaccctttctatttacgggtttcaccatgcaaacctcttc 483  Q
    ||||||||||| ||   |||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  32240803 ttgttctccattaaatgtgtacatgtaccctttttattttcgggtttcaccatgcaaacgtcttc 32240867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 16292987 - 16292925
Alignment:
Q  26 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||||||||||||||||| |||| ||| || ||||||||| ||||| | ||||||||    
T  16292987 aacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacatagtacaattcaac 16292925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 33128093 - 33128151
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaaca 71  Q
    |||||| |||| | ||||||| |||||||||||||||||||| ||| ||||||||||||    
T  33128093 aatatctcttaaccacaacaatatcaattaaacatgattctcatcacaattcaacaaca 33128151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 31146376 - 31146293
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||  |||||||||| |||| || |||  | | |||||||||||| |||||||||||||||| | |||||||||    
T  31146376 atcacttagcaacagtaacatcaattgaacaggaatcttattacaattcaacaaca-catagcataattcaacaatttgagcata 31146293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 3437 - 3404
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatga 49  Q
    |||||||||||||||||||||||||| |||||||    
T  3437 atcacttagcaacaacaacatcaattgaacatga 3404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 22775392 - 22775331
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 86  Q
    |||||||||| |||||| ||||||| |||  ||| |||||||| ||| ||||||||||||||    
T  22775392 caacaacaacttcaattgaacatgaatcttatcacaattcaactacaacatagcataattca 22775331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 22780770 - 22780709
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 86  Q
    |||||||||| |||||| ||||||| |||  ||| |||||||| ||| ||||||||||||||    
T  22780770 caacaacaacttcaattgaacatgaatcttatcacaattcaactacaacatagcataattca 22780709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 272
Target Start/End: Complemental strand, 32303723 - 32303694
Alignment:
Q  243 gattaatgaataagttgaatgattgtttaa 272  Q
    ||||||||||||||||||||||||||||||    
T  32303723 gattaatgaataagttgaatgattgtttaa 32303694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 36890881 - 36890798
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||| ||||| | |||||  ||  ||| |||| | ||||| ||||||||||||| ||||||| ||||||    
T  36890881 atcacttagcaacaacaacaacaattgatcatgaaacttatcacaatttatcaacaacatagcataattc-accaattaagcata 36890798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 435; Significance: 0; HSPs: 1)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 13 - 491
Target Start/End: Complemental strand, 4523 - 4045
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcatacaatgaacatga 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4523 aatatcacttagcaacaacaacatcaattaaacatggttctcttcataattcaaaaacatcatagcataattcaaccaattgagcatacaatgaacatga 4424  T
Q  113 gtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacatgtcaattgtgccaatagaattttcacaacat 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4423 gtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacaggtcaattgtgccaatagaattttcacaacat 4324  T
Q  213 taagtggcttttattttatttttcatttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaaacccaactcatt 312  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4323 taagtagcttttattttattttttgtttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaaacccaactcatt 4224  T
Q  313 cgcaagcttgtaacattcctcatcaattgtcttggtcctgaatgcaaggggtttaacaacacgaaccacgcgaacgacaccctccatcttggtggggaca 412  Q
     ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4223 ggcaagcttgtaacattcctcatcaattgtcttggtcccgaatgcaaggggtttaacaacacgaaccacgcgaacgacaccctccatcttggtggggaca 4124  T
Q  413 atcatgttgttctccataaacgttgtacatgtaccctttctatttacgggtttcaccatgcaaacctcttcctcatgat 491  Q
    || ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4123 atgatgttgttctccataaatgttgtacatgtaccctttgtatttacgggtttcaccatgcaaacctcttcctcatgat 4045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1678 (Bit Score: 134; Significance: 2e-69; HSPs: 1)
Name: scaffold1678
Description:

Target: scaffold1678; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 101 - 278
Target Start/End: Original strand, 103 - 280
Alignment:
Q  101 caatgaacatgagtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacatgtcaattgtgccaatagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||    
T  103 caatgaacatgagtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacagatccaggtcaattgtgccaatagaa 202  T
Q  201 ttttcacaacattaagtggcttttattttatttttcatttacgattaatgaataagttgaatgattgtttaaacaatc 278  Q
    ||||| ||||||||| || ||||||||||||||||  |||| ||||||| |||||||||||||||||||||| |||||    
T  203 ttttcgcaacattaaatgacttttattttatttttggtttaggattaataaataagttgaatgattgtttaatcaatc 280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 9e-28; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 23981715 - 23981628
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||| |||| ||||||||||||| |||||||||    
T  23981715 aatatcacttagcaacaacaacatcaattgaacatggttctcatcataattcaacaacaacatatcataattcaaccatttgagcata 23981628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 19862257 - 19862344
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||||||  ||||||||||  ||| |||||||||||| |||||||||||||||| | |||||||||    
T  19862257 aatatcacttagcaacaacaacatcaattgcacatgattcttatcacaattcaacaacaacatagcataattcaacaatttgagcata 19862344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 23493970 - 23494047
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaatt 93  Q
    |||||||||||||||||||||||||| ||||||| |||  ||| |||||||||||| |||||||||||||||||||||    
T  23493970 atcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcaaccaatt 23494047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 7728471 - 7728555
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| ||||||| |||  ||| |||||||||||| |||||||||||||||| | |||||||||    
T  7728471 atcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcaacaatttgagcata 7728555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 29918013 - 29918088
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| || ||||||||    
T  29918013 aatatctcttagcaacaacaacatcagttaaacatgattctcatcataattcaacaacaacataacacaattcaac 29918088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 6456673 - 6456759
Alignment:
Q  14 atatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||| |||| || |||||||| | |||||||||    
T  6456673 atatctcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaacataacacaattcaacaatttgagcata 6456759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 24084132 - 24084200
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||||||| | ||| |||||||||||| ||||||| ||||||||    
T  24084132 cttagcaacaacaacatcaattaaacatgattcacatcacaattcaacaacaacatagcacaattcaac 24084200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 21617064 - 21617139
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||| |||||||||||| ||||| | ||||||||    
T  21617064 aatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagaacaattcaac 21617139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 26560014 - 26559939
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||||||||||||||||||||||||||| |||||| ||| || ||||||||| ||||||| ||||||||    
T  26560014 aatatctcttagcaacaacaacatcaattaaacataattctcatcacaaatcaacaacaacatagcacaattcaac 26559939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 37983412 - 37983487
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||| |||||||||||||||||||||||||||||| | | |||||||||| | ||||||| ||||||||    
T  37983412 aatatcacttaacaacaacaacatcaattaaacatgattctcattacaattcaacaataacatagcacaattcaac 37983487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 22885690 - 22885764
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaa 87  Q
    |||||| |||| ||||||||||||||||||||||||||||||  ||||||||||||||| |||| || |||||||    
T  22885690 aatatctcttaacaacaacaacatcaattaaacatgattctcaacataattcaacaacaacataacacaattcaa 22885764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 21109798 - 21109873
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| || ||||||||| |||| || ||||||||    
T  21109798 aatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacataacacaattcaac 21109873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 3673917 - 3673997
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||| | |||||  ||  ||| |||||||||||| |||||||||||||||| | |||||||||    
T  3673917 cttagcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacatagcataattcaacaatttgagcata 3673997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 5451039 - 5450955
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||| || ||||||| | |  ||| |||||||||||| |||||||||||||| | | |||||||||    
T  5451039 atcacttagcaacaacaacatcagttgaacatgaattttatcacaattcaacaacaacatagcataattcatcaatttgagcata 5450955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 432511 - 432598
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||   || ||| |||||||| ||||| |||||||| | | |||||||||    
T  432511 aatatcacttagcaacaacaacatcaattgaacatgaatcttaccacaatccaacaacaacatagtataattcatcaatttgagcata 432598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 21222807 - 21222736
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 84  Q
    |||||||||||||||||||||||| |||| ||||||| |||  ||| |||||||||||| ||||||| ||||    
T  21222807 aatatcacttagcaacaacaacattaattgaacatgaatcttatcacaattcaacaacaacatagcacaatt 21222736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 23234684 - 23234610
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaa 87  Q
    |||||| |||| ||| |||||||||||||||||||||||||| |||  | |||||||||  |||||| |||||||    
T  23234684 aatatctcttaacaataacaacatcaattaaacatgattctcatcactaatcaacaacaaaatagcacaattcaa 23234610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 1168397 - 1168317
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||| | |||||  ||  ||| |||||| ||||| ||| ||||||||| ||||||||||||||    
T  1168397 acttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacattgcataattc-accaattgagcata 1168317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 16835491 - 16835426
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattc 85  Q
    |||| |||||||||||| |||||||||||| |||| ||| || ||||||||| ||||||| |||||    
T  16835491 cttaacaacaacaacattaattaaacatgaatctcatcacaaatcaacaacaacatagcacaattc 16835426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 11763692 - 11763629
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||| ||||||||||||| || | ||| || ||||||||| ||||||| ||||||||    
T  11763692 caacaacaacaacaattaaacatgaatcccatcacaaatcaacaacaacatagcacaattcaac 11763629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 24183319 - 24183245
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||| |||||||| | |||||  ||| ||| |||||||||||| || |||||||||| ||||||||||||||    
T  24183319 caacaacaccatcaattgatcatgaaactcatcacaattcaacaacaacaaagcataattc-accaattgagcata 24183245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 28902252 - 28902310
Alignment:
Q  26 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 84  Q
    ||||||||| |||||| ||||||| |||  ||| |||||||||||| ||||||||||||    
T  28902252 aacaacaacttcaattgaacatgaatcttatcacaattcaacaacaacatagcataatt 28902310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 28938647 - 28938705
Alignment:
Q  26 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 84  Q
    ||||||||| |||||| ||||||| |||  ||| |||||||||||| ||||||||||||    
T  28938647 aacaacaacttcaattgaacatgaatcttatcacaattcaacaacaacatagcataatt 28938705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 11337379 - 11337299
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||| | |||||  ||  ||| |||||| ||||| |||| |||||||| ||||| ||||||||    
T  11337379 acttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacataacataattc-accaaatgagcata 11337299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 19873892 - 19873933
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctc 54  Q
    |||||| |||| ||||||||||||||||||||||||| ||||    
T  19873892 aatatctcttaacaacaacaacatcaattaaacatgaatctc 19873933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 23417301 - 23417362
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 86  Q
    ||||||||||||||||||||||||| | ||  || || ||||||||| ||||||| ||||||    
T  23417301 caacaacaacatcaattaaacatgaatgtcaccacaaatcaacaacaacatagcacaattca 23417362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 2573 - 2648
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||| ||||||||||||||||    
T  2573 aatatcacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacatagcataattcaac 2648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 43997 - 43926
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 84  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  43997 aatatcacttagcaacaacaacatcaattaaacatgattctcatcataattcaacaacaacatagcacaatt 43926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 23864 - 23796
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||| |||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  23864 cttaacaacaacaacgtcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaac 23796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 79587 - 79674
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||||||||| |||||| ||| | |||||||||||||||| |||| |||||||||||||||| ||||||    
T  79587 aatatcacttagcaacaacaacatcaattgaacatggttcacatcataattcaacaacaacatatcataattcaaccaattaagcata 79674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 29306465 - 29306552
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| ||||||| |||||||| | |||||||||    
T  29306465 aatatcacttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacatagcacaattcaacaatttgagcata 29306552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 23226275 - 23226188
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||| ||||||||||||||||| |||||| ||||| |||||||||||||||| |||| |||||||||| || |||||||||    
T  23226275 aatatcacttaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaacataacataattcaatcatttgagcata 23226188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 33611252 - 33611178
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaa 87  Q
    |||||||||||||||||||||||||||||||||||| |||||  || |||||||||||| |||||||||||||||    
T  33611252 aatatcacttagcaacaacaacatcaattaaacatggttctcaacacaattcaacaacaacatagcataattcaa 33611178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 23158211 - 23158295
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||| |||||||||| | ||| |||||| ||||| |||||||||||||||| |||| |||||||||||||||||||||||    
T  23158211 atcacttaggaacaacaacaactattgaacatggttctcatcataattcaacaacaacataacataattcaaccaattgagcata 23158295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 39446962 - 39446878
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| ||||||||||||||||||||| ||||||    
T  39446962 atcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaatttagcata 39446878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 15933346 - 15933421
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||| |||| || ||||||||    
T  15933346 aatatcacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacataacacaattcaac 15933421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 18261670 - 18261595
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  18261670 aatatctcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaac 18261595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 22742824 - 22742887
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  22742824 caacaacaacatcaattaaacatgattctcatcataattcaacaacaacatagcacaattcaac 22742887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 26011542 - 26011617
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||| |||||||||||| ||||||| ||||||||    
T  26011542 aatatcacttagcaacaacaacatcaattcaacatgaatctcatcacaattcaacaacaacatagcacaattcaac 26011617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 33528473 - 33528548
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||||||||||||||||||||||||||||| |||| ||| |||||||||||| ||||||| ||||||||    
T  33528473 aatatctcttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacatagcacaattcaac 33528548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 38635847 - 38635772
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||| |||| || ||||||||    
T  38635847 aatatctcttaacaacaacaacatcaattaaacatgattctcatcataattcaacaacaacataacacaattcaac 38635772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 45559136 - 45559061
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  45559136 aatatcccttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaac 45559061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 23152032 - 23151951
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattg 94  Q
    |||||||| ||||||||||| |||||||| |||| | ||||| |||||||||||||||| |||| |||||||||||||||||    
T  23152032 aatatcacatagcaacaacagcatcaattgaacacggttctcatcataattcaacaacaacatatcataattcaaccaattg 23151951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 21198348 - 21198264
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| |||||||||||   || |||||||||||| |||| ||||||||||| | |||||||||    
T  21198348 atcacttagcaacaacaacatcaattgaacatgattcttaccacaattcaacaacaacataacataattcaacaatttgagcata 21198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 23837249 - 23837333
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| ||||||| |||   || |||||||||||| |||||||||||||||| | |||||||||    
T  23837249 atcacttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacatagcataattcaacaatttgagcata 23837333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 38533700 - 38533784
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||| |||||||||||||||||||| ||||||| |||| ||| |||||||||||| |||||||||||||||  | |||||||||    
T  38533700 atcacctagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcataattcaataatttgagcata 38533784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 5854662 - 5854737
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||| |||||||||||| ||||||| || |||||    
T  5854662 aatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcacaactcaac 5854737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 27233266 - 27233191
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||| |||| || ||||||||    
T  27233266 aatatctcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaacataacacaattcaac 27233191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 19331500 - 19331426
Alignment:
Q  26 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| || ||||| | |||||||||    
T  19331500 aacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaactcaacaatttgagcata 19331426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 23149832 - 23149913
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||| |||| | ||| |||||||||||| ||||||||||||||   | ||||||||||||||||||||||||||    
T  23149832 atcacttagcaacaaaaacaactattgaacatgattctcatcataattcaacaa---cttagcataattcaaccaattgagcata 23149913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 33172289 - 33172351
Alignment:
Q  26 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  33172289 aacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaac 33172351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 45465325 - 45465250
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||| | ||||||  ||||||||    
T  45465325 aatatctcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaataacatagctcaattcaac 45465250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 18041724 - 18041656
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||| |||||||||||||||||||||||||||||| ||| || ||||||||| |||| || ||||||||    
T  18041724 cttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacataacacaattcaac 18041656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 22497401 - 22497333
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||| ||||||||||||||||||||||||| |||| ||| || ||||||||| ||||||| ||||||||    
T  22497401 cttatcaacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacatagcacaattcaac 22497333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 24552768 - 24552694
Alignment:
Q  14 atatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||| || | ||||||| |||| || ||||||||    
T  24552768 atatctcttaacaacaacaacatcaattaaacatgattctcatcacaaattaacaacaacataacacaattcaac 24552694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 25296222 - 25296293
Alignment:
Q  28 caacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||| |||||| |||||||| ||||||| ||||| | |||||||| | |||||||||    
T  25296222 caacaacatcaattaaacataattctcatcataattgaacaaca-catagaacaattcaacaatttgagcata 25296293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 25758242 - 25758313
Alignment:
Q  28 caacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||| |||||| |||||||| ||||||| ||||| | |||||||| | |||||||||    
T  25758242 caacaacatcaattaaacataattctcatcataattgaacaaca-catagaacaattcaacaatttgagcata 25758313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 20709755 - 20709814
Alignment:
Q  28 caacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaa 87  Q
    ||||||||||||||||||||||||||| ||| || |||||||||  |||||| |||||||    
T  20709755 caacaacatcaattaaacatgattctcatcaaaactcaacaacaaaatagcacaattcaa 20709814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 37653808 - 37653757
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaaca 71  Q
    |||| ||||||||||||||||||||||||||||||  || ||||||||||||    
T  37653808 cttaacaacaacaacatcaattaaacatgattctcaacagaattcaacaaca 37653757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 21681066 - 21681137
Alignment:
Q  29 aacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||| | |||||  ||  ||| |||||||||||| || ||||||||| |||||||||||||||    
T  21681066 aacaacatcaattgatcatgaaactaatcacaattcaacaacaacaaagcataatttaaccaattgagcata 21681137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 22736034 - 22735964
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 86  Q
    |||| ||||||| ||||||||||||| ||||||| |||  ||| ||| |||||||| ||||| ||||||||    
T  22736034 atcagttagcaagaacaacatcaattgaacatgaatcttatcacaatccaacaacaacatagtataattca 22735964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 37611722 - 37611802
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||| ||||||||||| ||||| | |||||  || |||| |||||| ||||| || |||||||||| ||||||||||||||    
T  37611722 acttaacaacaacaacaacaattgatcatgaaacttttcacaattcatcaacaacaaagcataattc-accaattgagcata 37611802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 22981368 - 22981408
Alignment:
Q  60 aattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||| |||||||||||||||| | |||||||||    
T  22981368 aattcaacaacaacatagcataattcaacaatttgagcata 22981408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 20583753 - 20583666
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| | |||||||||    
T  20583753 aatatcccttaacaacaacaacatcaattaaacatgattctcatcataattcaacaacaacatagcacaattcaacaatttgagcata 20583666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 13274838 - 13274922
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| ||||||||||||||||||||||||||||    
T  13274838 atcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcata 13274922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 9611355 - 9611430
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  9611355 aatatcacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacatagcacaattcaac 9611430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 9838927 - 9839002
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  9838927 aatatcacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacatagcacaattcaac 9839002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 13863129 - 13863042
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||| ||||| ||||||| | |  ||| |||||||||||| ||||||||||||||||||||||||||||    
T  13863129 aatatcacttagcaacaacaacaacaattgaacatgaatattatcacaattcaacaacaacatagcataattcaaccaattgagcata 13863042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 12248317 - 12248233
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||| ||| | ||||| |||  ||| |||||||||||| ||||||||||||||||||||||||||||    
T  12248317 atcacttagcaacaacaacatccattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcata 12248233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 14940810 - 14940890
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||| |||||||||||||| ||||||||||||||| |||||||||||||||| ||||||| |||||||| | |||||||||    
T  14940810 cttaacaacaacaacatcatttaaacatgattctcatcataattcaacaacaacatagcacaattcaacaatttgagcata 14940890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 49047870 - 49047786
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| |||| |||||||||||||||||||||||    
T  49047870 atcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacataacataattcaaccaattgagcata 49047786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 4484775 - 4484862
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| ||||||||||||  |||||| |||||||| | |||||||||    
T  4484775 aatatctcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaatatagcacaattcaacaatttgagcata 4484862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 16915127 - 16915052
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||| ||||||||||||||||||||||| ||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  16915127 aatatgacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacatagcacaattcaac 16915052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 16919607 - 16919694
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||| |||||||||||||||||||||||||||| ||||||  ||| |||||||||||| |||||||||||||| | | |||||||||    
T  16919607 aatattacttagcaacaacaacatcaattaaacacgattcttatcacaattcaacaacaacatagcataattcatcaatttgagcata 16919694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 34241383 - 34241312
Alignment:
Q  17 tcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||| || ||||||||    
T  34241383 tcacttatcaacaacaacatcaattaaacatgattctcatcataattcaacaacaacataacacaattcaac 34241312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 48356692 - 48356767
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||| |||| || ||||||||    
T  48356692 aatatcacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacataacacaattcaac 48356767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 31501233 - 31501307
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcat 99  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| |||||||| | ||||||||    
T  31501233 caacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaacaatttgagcat 31501307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 16570202 - 16570118
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| | |||||  ||  ||  |||||||||||| ||||||||||||||||||||||||||||    
T  16570202 atcacttagcaacaacaacatcaattgatcatgaaacttatctcaattcaacaacaacatagcataattcaaccaattgagcata 16570118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 16595460 - 16595544
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| | |||||  ||  ||  |||||||||||| ||||||||||||||||||||||||||||    
T  16595460 atcacttagcaacaacaacatcaattgatcatgaaacttatctcaattcaacaacaacatagcataattcaaccaattgagcata 16595544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 13449026 - 13448951
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||| | ||||||| ||||||||    
T  13449026 aatatctcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaataacatagcacaattcaac 13448951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 17947791 - 17947716
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| || ||||||||| ||||||| ||||||||    
T  17947791 aatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacatagcacaattcaac 17947716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 38424267 - 38424354
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||| |||| |||||||||||||| |||||||| |||||| |||||||||||||||| ||||| | |||||||| | |||||||||    
T  38424267 aatatctcttaacaacaacaacatcacttaaacataattctcatcataattcaacaacaacatagaacaattcaacaatttgagcata 38424354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 9724006 - 9723931
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| ||||||||||||||||||||||||| |||| ||| || ||||||||| ||||||| ||||||||    
T  9724006 aatatctcttaacaacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacatagcacaattcaac 9723931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 28390360 - 28390435
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| ||||||||||||||||||||||||||| || ||| |||||||||| | ||||||| ||||||||    
T  28390360 aatatctcttaacaacaacaacatcaattaaacatgattatcatcacaattcaacaataacatagcacaattcaac 28390435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 33559695 - 33559770
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| || ||||||||| |||| || ||||||||    
T  33559695 aatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacataacacaattcaac 33559770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 46474049 - 46474124
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| ||||||||||||||||||||||||| |||| ||| || ||||||||| ||||||| ||||||||    
T  46474049 aatatctcttaacaacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacatagcacaattcaac 46474124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 14935421 - 14935495
Alignment:
Q  26 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||||| |||| || |||||||| | |||||||||    
T  14935421 aacaacaacatcatttaaaaatgattctcatcataattcaacaacaacatatcacaattcaacaatttgagcata 14935495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 15363014 - 15363088
Alignment:
Q  26 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||||| |||| || |||||||| | |||||||||    
T  15363014 aacaacaacatcatttaaaaatgattctcatcataattcaacaacaacatatcacaattcaacaatttgagcata 15363088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 15368403 - 15368469
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 86  Q
    |||| |||||||||||||| ||||||||||||||| |||||||||||||||| |||| || ||||||    
T  15368403 cttaacaacaacaacatcatttaaacatgattctcatcataattcaacaacaacatatcacaattca 15368469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 13377583 - 13377648
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 84  Q
    ||||||||||||||||||||||| ||||||| |||  ||| |||||||||||| ||||||||||||    
T  13377583 acttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataatt 13377648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 45149650 - 45149723
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 86  Q
    |||||| |||| ||||||||||||||||||||||||| |||| ||| ||  |||||||||||||||| ||||||    
T  45149650 aatatctcttaacaacaacaacatcaattaaacatgaatctcatcacaaaccaacaacatcatagcacaattca 45149723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 4446268 - 4446335
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||| ||||||||||||||||||| |||||||||| ||| |||||||||||| ||||||| ||||||||    
T  4446268 cttatcaacaacaacatcaattaa-catgattctcatcacaattcaacaacaacatagcacaattcaac 4446335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 15358852 - 15358920
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||| |||||||||||||||||||||||||||| | ||| |||||||||||| |||| || ||||||||    
T  15358852 cttaacaacaacaacatcaattaaacatgattcccatcacaattcaacaacaacataacacaattcaac 15358920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 17224134 - 17224062
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||||||||||||||||||| ||||||| |||    | |||||||||||| ||||||||||||||||    
T  17224134 atcacttagcaacaacaacatcaattgaacatgactcttacaacaattcaacaacaacatagcataattcaac 17224062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 12370036 - 12369953
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||||| |||||   |  ||| |||||||||||| ||  ||||||||| ||||||||||||||    
T  12370036 atcacttagcaacaacaacatcaattaatcatgaaagttatcacaattcaacaacaacaaggcataattc-accaattgagcata 12369953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 28722169 - 28722245
Alignment:
Q  25 caacaacaacatcaattaaacatga-ttctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||| ||| |||||||||| ||||| ||| |||||||||||| ||||||| |||||||| | |||||||||    
T  28722169 caacaacaacttcatttaaacatgaattctcatcacaattcaacaacaacatagcacaattcaacaatttgagcata 28722245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 8267915 - 8267852
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||| |||||||||||||| |||||| ||| || ||||||||| ||||||| ||||||||    
T  8267915 caacaacatcatcaattaaacataattctcatcacaaatcaacaacaacatagcacaattcaac 8267852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 11287471 - 11287551
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||| | | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  11287471 acttagcaacaacaacatcaactgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 11287551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 12759041 - 12759121
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||| ||||||||||| ||||| | |||||  ||  |||||||||| ||||| ||||||||||||| ||||||||||||||    
T  12759041 acttaacaacaacaacaacaattgatcatgaaacttatcataattcaccaacaacatagcataattc-accaattgagcata 12759121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 3049634 - 3049717
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||| ||||||||||||| ||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  3049634 atcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 3049717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 3895076 - 3895159
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||| ||||||||||||| ||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  3895076 atcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 3895159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 14272085 - 14272045
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattct 53  Q
    ||||||| ||||||||||||||||||||| |||||||||||    
T  14272085 aatatcatttagcaacaacaacatcaattgaacatgattct 14272045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 26070460 - 26070377
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| | |||||  ||  ||| |||||| ||||| |||| |||||||| ||||||| ||||||    
T  26070460 atcacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacataacataattc-accaattaagcata 26070377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 26094247 - 26094164
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| | |||||  ||  ||| |||||| ||||| |||| |||||||| ||||||| ||||||    
T  26094247 atcacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacataacataattc-accaattaagcata 26094164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 7964910 - 7964835
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  7964910 aatatcacttagcaacaacaaaatcaattaaacatgattctcatcataattcaacaacaacatagcacaattcaac 7964835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 18238356 - 18238281
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  18238356 aatatctcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaac 18238281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 52265707 - 52265620
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||  ||| |||||||||||| ||| |||||||||||| | |||||||||    
T  52265707 aatatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacattgcataattcaacaatttgagcata 52265620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 38764764 - 38764842
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 98  Q
    |||| |||||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||||| | |||||||    
T  38764764 cttaacaacaacaacatcaattaaacatgattctcatcataattgaacaacaacatcgcataattcaacaatttgagca 38764842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 7186043 - 7185970
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 86  Q
    |||||| |||||||||||||||||||||||||||||| |||| ||| |||||||||||| ||||||| ||||||    
T  7186043 aatatctcttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacatagcacaattca 7185970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 13809706 - 13809622
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||| ||||||||||||||||||||| | ||||| |||  ||| |||||||||||| |||||||||||||||| |||||||||||    
T  13809706 atcaattagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaactaattgagcata 13809622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 15044879 - 15044963
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| ||||||| |||  ||| |||||||||||| |||||||||||||| | | |||||||||    
T  15044879 atcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcatcaatttgagcata 15044963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 41166142 - 41166058
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| ||||||| |||   || |||||||||||| |||||||||||||||| | |||||||||    
T  41166142 atcacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacatagcataattcaacaatttgagcata 41166058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 15013481 - 15013394
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||| |||| ||||||||| |||||||||||||||||||| ||| |||||||||||| | ||||| |||||||| | |||||||||    
T  15013481 aatatctcttaacaacaacaatatcaattaaacatgattctcatcacaattcaacaacaacctagcacaattcaacaatttgagcata 15013394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 40905132 - 40905058
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||||||||||||||||||||||| |||||||||| ||| |||||||||||| ||||||| ||||||||    
T  40905132 aatatctcttagcaacaacaacatcaattaa-catgattctcatcacaattcaacaacaacatagcacaattcaac 40905058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 41256568 - 41256481
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||| |||| |||||||||||||||||||||||| ||||| ||| |||||||||||| | ||||| |||||||| | |||||||||    
T  41256568 aatatctcttaacaacaacaacatcaattaaacatggttctcatcacaattcaacaacaacctagcacaattcaacaatttgagcata 41256481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 41916925 - 41916850
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||| ||||||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  41916925 aatatctcttaacaacaacaacatcagttaaacatgattctcatcacaattcaacaacaacatagcacaattcaac 41916850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 13590273 - 13590198
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| ||||||||||||||||||||||||| |||| ||| || ||||||||| ||||||| ||||||||    
T  13590273 aatatctcttaacaacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacatagcacaattcaac 13590198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 18276482 - 18276557
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||| |||||||||||||||||| ||||||| |||| ||| ||||||||||||  |||||| ||||||||    
T  18276482 aatatcactttgcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaatatagcacaattcaac 18276557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 47468535 - 47468472
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||| |||| || ||||||||    
T  47468535 caacaacaacatcaattaaacatgattctcatcacaattcaacaacaacataacacaattcaac 47468472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 47535252 - 47535177
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||| |||||| |||||||||||  |||||||||||||||| |||||||||||||| | | |||||||||    
T  47535252 caacaacaacgtcaattgaacatgattcttatcataattcaacaacaacatagcataattcatcaatttgagcata 47535177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 54398431 - 54398506
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| || ||||||||| |||| || ||||||||    
T  54398431 aatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacataacacaattcaac 54398506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 15109542 - 15109477
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 84  Q
    ||||||||||||||||||||||| ||||||| |||  ||| |||||||||||| ||||||||||||    
T  15109542 acttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataatt 15109477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 13442863 - 13442800
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| | |||| || ||||||||    
T  13442863 caacaacaacatcaattaaacatgattctcatcacaattcaacaataacataacacaattcaac 13442800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 50220139 - 50220064
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| || ||||||||| || | || ||||||||    
T  50220139 aatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacacaacacaattcaac 50220064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 19821972 - 19821919
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaa 69  Q
    ||||| |||||||||||||||||||| |||||| ||||| ||||||||||||||    
T  19821972 atcacatagcaacaacaacatcaattgaacatggttctcatcataattcaacaa 19821919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 27961022 - 27961106
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||| ||||||||||||||||| | ||||| |||  | | ||||||||||||  ||| |||||||||||||||| ||||||    
T  27961022 atcacttaacaacaacaacatcaattgatcatgaatcttataacaattcaacaacaatataacataattcaaccaatttagcata 27961106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 16732223 - 16732303
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||| ||||||||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  16732223 acttagcaacaacgacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 16732303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 12837396 - 12837313
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||| ||||||||||||| ||| | |||||  ||  ||| |||| ||||||| ||||||||||||| ||||||||||||||    
T  12837396 atcacttaacaacaacaacatccattgaccatgaaacttatcacaatttaacaacaacatagcataattc-accaattgagcata 12837313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 14901283 - 14901355
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||||||||||||||||||| || ||||||||   || ||||||| || | |||| |||||||||||    
T  14901283 atcacttagcaacaacaacatcaattgaatatgattcttaccacaattcaataataacatatcataattcaac 14901355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 30232692 - 30232609
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||| ||||||||||||| ||| | |||||  ||  ||| |||| ||||||| ||||||||||||| ||||||||||||||    
T  30232692 atcacttaacaacaacaacatccattgatcatgaaacttatcacaatttaacaacaacatagcataattc-accaattgagcata 30232609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 21959650 - 21959576
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  21959650 caacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 21959576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 18494524 - 18494442
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 98  Q
    |||||||| |||||||| || ||||| | ||||| |||   || |||||||||||| |||||||| || ||||||||||||||    
T  18494524 atcacttaacaacaacagcaacaattgatcatgaatcttaacacaattcaacaacaacatagcatcatccaaccaattgagca 18494442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 37957221 - 37957169
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaaca 68  Q
    ||||||||||| |||| ||||||||| ||||||| ||||  ||||||||||||    
T  37957221 atcacttagcagcaaccacatcaattgaacatgaatctcagcataattcaaca 37957169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 22143560 - 22143473
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||| |||||||||||||| | |||| ||||| |||||||||||||||| |||||||||||||||||| |||||||||    
T  22143560 aatatcacttagcagcaacaacatcaattgagcatggttctcatcataattcaacaacaacatagcataattcaaccatttgagcata 22143473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 37234059 - 37233984
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||| |||||||| ||| ||||||||||||||||    
T  37234059 aatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaaccacaacatagcataattcaac 37233984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 52400689 - 52400754
Alignment:
Q  23 agcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  52400689 agcaacaacaacgtcaattaaacatgattctcatcataattcaacaacaacatagcacaattcaac 52400754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 51627860 - 51627776
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| |||| |||||||||||||||||| ||||    
T  51627860 atcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaccatatcataattcaaccaattgaacata 51627776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 17608976 - 17609051
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||| ||||||||||| ||||| ||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  17608976 aatatcacttaacaacaacaacaacaattgaacatgaatctcatcataattcaacaacaacatagcacaattcaac 17609051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 21195062 - 21195149
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||| |||||||||||| | ||||| |||||||| | |||||||||    
T  21195062 aatatctcttaacaacaacaacattaattaaacatgattctcatcacaattcaacaacaacctagcacaattcaacaatttgagcata 21195149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 8538102 - 8538046
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcata 76  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  8538102 cttaacaacaacaacatcaattaaacatgattctcatcataattcaacaacaacata 8538046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 8603341 - 8603285
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcata 76  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  8603341 cttaacaacaacaacatcaattaaacatgattctcatcataattcaacaacaacata 8603285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 33397400 - 33397475
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| ||||||||| |||||||||||||||||||| ||| || ||||||||| ||||||| ||||||||    
T  33397400 aatatctcttaacaacaacaagatcaattaaacatgattctcatcacaaatcaacaacaacatagcacaattcaac 33397475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 13377036 - 13376964
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||||||||||||||||||| | ||||| | ||  ||||||||||||||| |||| |||||||||||    
T  13377036 atcacttagcaacaacaacatcaattgagcatgactttcaccataattcaacaacaacataacataattcaac 13376964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 20177226 - 20177310
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| ||| ||| | |   || |||||||||||| |||||||||||||||| | |||||||||    
T  20177226 atcacttagcaacaacaacatcaattgaacttgacttttaccacaattcaacaacaacatagcataattcaacaatttgagcata 20177310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 49997470 - 49997406
Alignment:
Q  23 agcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaa 87  Q
    |||||||||||||||| |||||||||||||||  | ||||||||||||| ||||||| |||||||    
T  49997470 agcaacaacaacatcagttaaacatgattctcaccttaattcaacaacaacatagcacaattcaa 49997406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 5768368 - 5768293
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| || | ||||||| |||| || ||||||||    
T  5768368 aatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaattaacaacaacataacacaattcaac 5768293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 40436468 - 40436393
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| ||||  |||||||||||||||||||||| |||||| ||| || ||||||||| ||||||| ||||||||    
T  40436468 aatatctcttaaaaacaacaacatcaattaaacataattctcatcacaaatcaacaacaacatagcacaattcaac 40436393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 25093920 - 25093982
Alignment:
Q  26 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||||||||||||||||| |||| ||| || ||||||||| |||| || ||||||||    
T  25093920 aacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacataacacaattcaac 25093982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 35522506 - 35522430
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcataca 102  Q
    ||||||||||||||||| | |||||  ||  ||| |||||||||||| || |||||||||| ||||||||||||||||    
T  35522506 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattc-accaattgagcataca 35522430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 41229135 - 41229098
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattct 53  Q
    |||||||||||||||||||||||||| |||||||||||    
T  41229135 atcacttagcaacaacaacatcaattgaacatgattct 41229098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 16645975 - 16646031
Alignment:
Q  28 caacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 84  Q
    |||||||||||||| ||||||| |||  ||| |||||||||||| ||||||||||||    
T  16645975 caacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataatt 16646031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 27329951 - 27329868
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||| ||||||||||||| ||| | |||||  ||  ||| |||| ||||||| ||||||||||||| ||||||||||||||    
T  27329951 atcacttaacaacaacaacatccattgatcatgaaacttatcacaatttaacaacaacatagcataattc-accaattgagcata 27329868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 16656699 - 16656757
Alignment:
Q  26 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 84  Q
    ||||||||| |||||| ||||||| |||  ||| |||||||||||| ||||||||||||    
T  16656699 aacaacaacttcaattgaacatgaatcttatcacaattcaacaacaacatagcataatt 16656757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 36356489 - 36356437
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaaca 68  Q
    ||||||||| |||||||||||||||| ||||||| ||||  ||||| ||||||    
T  36356489 atcacttagaaacaacaacatcaattgaacatgaatctcagcataaatcaaca 36356437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 8061 - 8145
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||| |||||||||||||||||||| |||||| ||||| ||||||||| |||||| |||||||||||||| |||||||||||||    
T  8061 atcacatagcaacaacaacatcaattgaacatggttctcatcataattccacaacaacatagcataattcacccaattgagcata 8145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 18398989 - 18399073
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| ||||||| |||| ||| |||||||||||| |||||||||||||||| | |||||||||    
T  18398989 atcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcataattcaacaatttgagcata 18399073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 25651285 - 25651360
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  25651285 aatatcacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacatagcacaattcaac 25651360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 15079904 - 15079820
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||| ||||| ||||||| |||||| ||||| ||||||||||||||||  ||||||||||||| |||||||||||||    
T  15079904 atcacttagcaataacaatatcaattgaacatggttctcatcataattcaacaacaatatagcataattcacccaattgagcata 15079820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 33324744 - 33324828
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||| ||||||||||||| |||||| ||||| |||||||||||| |||  ||||||||||||| |||||||||||||    
T  33324744 atcacttagcaataacaacatcaattgaacatggttctcatcataattcaaccacaatatagcataattcatccaattgagcata 33324828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 33538568 - 33538492
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaacc 89  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| | ||||||| |||||||||    
T  33538568 aatatcacttagcaataacaacatcaattaaacatgattctcatcacaattcaacaataacatagcacaattcaacc 33538492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 35136208 - 35136124
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||| ||||||||||||| |||||| ||||| |||||||||||| |||  ||||||||||||| |||||||||||||    
T  35136208 atcacttagcaataacaacatcaattgaacatggttctcatcataattcaaccacaatatagcataattcatccaattgagcata 35136124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 22361964 - 22361877
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||||||||| ||||||| | || ||| |||||||||||| |||||||||||||| | | |||||||||    
T  22361964 aatatcacttagcaacaacaacatcaattgaacatgaatttcatcacaattcaacaacaacatagcataattcatcaatttgagcata 22361877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 34966915 - 34966990
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| || ||||||||| ||||||||||||||||    
T  34966915 aatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacatagcataattcaac 34966990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 19854203 - 19854276
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 86  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||| ||||||    
T  19854203 aatatctcttagcaacaacaacatcaattaaacatgattctcatcacaattcaacaataacatagcacaattca 19854276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 21623219 - 21623303
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||  |||||||||||   || |||||||||||| |||||||||||||||| | |||||||||    
T  21623219 atcacttagcaacaacaacatcaatagaacatgattcttaccacaattcaacaacaacatagcataattcaacaatttgagcata 21623303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 29605505 - 29605573
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||||||||||||||||| |||||||| | |||||||||||||||| ||||||| ||||||||    
T  29605505 cttagcaacaacaacatcaattaagcatgattcacatcataattcaacaacaacatagcacaattcaac 29605573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 35009650 - 35009569
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 98  Q
    |||| ||| ||||||||||||||||| |||||| ||||| |||||||||||||||| ||||||| ||||| ||||||||||||    
T  35009650 atcaattaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattc-accaattgagca 35009569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 16887977 - 16887904
Alignment:
Q  27 acaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||| ||||||| |||||| ||||| |||||||||||||||| |||| ||||||||| |||||||||||||    
T  16887977 acaacaaaatcaattgaacatggttctcatcataattcaacaacaacataacataattcacccaattgagcata 16887904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 18381879 - 18381807
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||||||||||||||||||| ||||||| |||  ||| |||||||||||| || |||||||||||||    
T  18381879 atcacttagcaacaacaacatcaattgaacatgactcttatcacaattcaacaacaacaaagcataattcaac 18381807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 25367433 - 25367349
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| ||||||| |||  ||| |||||||||||| |||| || |||||||| | |||||||||    
T  25367433 atcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacataacacaattcaacaatttgagcata 25367349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 17083384 - 17083321
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||| ||||||| ||||||||    
T  17083384 caacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacatagcacaattcaac 17083321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 18629795 - 18629732
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| | ||||||| ||||||||    
T  18629795 caacaacaacatcaattaaacatgattctcatcacaattcaacaataacatagcacaattcaac 18629732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 29160502 - 29160427
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||  || ||||||||| ||||||| ||||||||    
T  29160502 aatatctcttaacaacaacaacatcaattaaacatgattctcatcgcaaatcaacaacaacatagcacaattcaac 29160427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 32352107 - 32352170
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||||||||||||||||||||||| ||| || ||||||||| |||| |||||||||||    
T  32352107 caacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacataacataattcaac 32352170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 22848078 - 22848148
Alignment:
Q  28 caacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 98  Q
    |||||||||||||||| ||| |||| | |||||||||||||||| ||||||| |||||||| | |||||||    
T  22848078 caacaacatcaattaagcattattcccatcataattcaacaacaacatagcacaattcaacaatttgagca 22848148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 25919670 - 25919724
Alignment:
Q  22 tagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcata 76  Q
    |||||||||||||||||||| |||||| ||||| |||||||||||||||| ||||    
T  25919670 tagcaacaacaacatcaattgaacatggttctcatcataattcaacaacaacata 25919724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 17557207 - 17557141
Alignment:
Q  21 ttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||||||||||||||||| |||||| |  ||| |||||||||||| ||||||| ||||||||    
T  17557207 ttagcaacaacaacatcaattaaatatgattataatcacaattcaacaacaacatagca-aattcaac 17557141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 22462295 - 22462221
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||| |||||||||| |||| ||| ||  |||||||||||||||| ||||||||    
T  22462295 aatatctcttaacaacaacaacatcatttaaacatgaatctcatcacaa-ccaacaacatcatagcacaattcaac 22462221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 28195290 - 28195207
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgat-tctcttcataattcaacaacatcatagcataattcaaccaattgagca 98  Q
    |||||||||||||||| ||| ||||| | ||| |  |||| ||| |||||||||||||||| |||||||||||| |||||||||    
T  28195290 atcacttagcaacaaccacaacaattgatcataaaatctcatcacaattcaacaacatcatggcataattcaactaattgagca 28195207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 23222811 - 23222874
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||| |||| ||| || | ||||||| ||||| | ||||||||    
T  23222811 caacaacaacatcaattaaacatgaatctcatcacaaataaacaacaacatagtacaattcaac 23222874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 7450 - 7525
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  7450 aatatctcttagcaacaccaacatcaattaaacatgattctcatcataattcaacaacagcatagcacaattcaac 7525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 16875 - 16950
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  16875 aatatctcttagcaacaccaacatcaattaaacatgattctcatcataattcaacaacagcatagcacaattcaac 16950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 6592 - 6667
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  6592 aatatctcttagcaacaacatcatcaattaaacatgattctcatcataattcaacaacaacatagcacaattcaac 6667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 104821 - 104735
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||||||||||| |||| || || |||||||||||||||| |||| ||||||||||||| |||||||||    
T  104821 aatatcacttagcaacaacaacatcaattaa-catggttatcatcataattcaacaacaacataacataattcaaccatttgagcata 104735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 5e-23; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 9590953 - 9590866
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||| ||||||||||||||||| |||||| ||||| ||| || ||||||||| |||||||||||||||| |||||||||||    
T  9590953 aatatcacttaacaacaacaacatcaattgaacatggttctcatcagaactcaacaacaacatagcataattcaacaaattgagcata 9590866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 11061205 - 11061118
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||| |||||||||||||| ||||||| | |  ||| |||||||||||| ||||||||||||||||||||||||||||    
T  11061205 aatatcacttagcaccaacaacatcaattgaacatgactattatcacaattcaacaacaacatagcataattcaaccaattgagcata 11061118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 14295489 - 14295573
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||| |||||||||||||||| | ||||| |||  ||| |||||||||||| ||||||||||||||||||||||||||||    
T  14295489 atcacttagaaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcata 14295573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 14301116 - 14301200
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||| |||||||||||||||| | ||||| |||  ||| |||||||||||| ||||||||||||||||||||||||||||    
T  14301116 atcacttagaaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcata 14301200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 14528208 - 14528124
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| |||||||| |||||||||||||||||||    
T  14528208 atcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcatgattcaaccaattgagcata 14528124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 17139559 - 17139643
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| |||||||| |||||||||||||||||||    
T  17139559 atcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcatgattcaaccaattgagcata 17139643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 14814964 - 14814879
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 98  Q
    |||||| |||| |||||||||||||||||||||||||||||  ||| |||||||||||| ||||||| |||||||| | |||||||    
T  14814964 aatatctcttaacaacaacaacatcaattaaacatgattcttatcacaattcaacaacaacatagcacaattcaacaatttgagca 14814879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 11329157 - 11329073
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| |||||||||||||||| | |||||||||    
T  11329157 atcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaacaatttgagcata 11329073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 12953012 - 12953087
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||||||||||||||||||||||||||| | |||| ||| |||||||||||| ||||||| ||||||||    
T  12953012 aatatctcttagcaacaacaacatcaattaaacataaatctcatcacaattcaacaacaacatagcacaattcaac 12953087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 33369100 - 33369034
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 86  Q
    |||| |||||| ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||    
T  33369100 cttaacaacaaaaacatcaattaaacatgattctcatcataattcaacaacaacatagcacaattca 33369034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 34559947 - 34560021
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaa 87  Q
    ||||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||  |||| ||||||||||    
T  34559947 aatatcacttagcaacaacaacatcaatcgaacatgaatctcatcataattcaacaactacataacataattcaa 34560021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 14080563 - 14080644
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||| |||| ||||||||||||| |||||| ||||| ||||||||||||||||  |||||| |||||| |||||||||||||    
T  14080563 acttcgcaataacaacatcaattgaacatggttctcatcataattcaacaacaatatagcacaattcacccaattgagcata 14080644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 4162397 - 4162329
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||||||| | |||| ||||||||||| |||| || ||||||||    
T  4162397 cttagcaacaacaacatcaattaaacatgattcacgtcatcattcaacaacaacataacacaattcaac 4162329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 6228817 - 6228749
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||||| | | ||||||||| |||||| ||||||| ||||||||    
T  6228817 cttagcaacaacaacatcaattaaacatgatccacatcataattcgacaacaacatagcacaattcaac 6228749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 16880174 - 16880258
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||| |||||||||| ||||||| |||  ||| |||||||||||| ||||||||||||  || |||||||||||    
T  16880174 atcacttagcaacaataacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataatttcacaaattgagcata 16880258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 3576637 - 3576550
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||| |||||||||||||||||||||| |||||||| |||  ||| |||||||||||| ||||||||||| || | | |||||||||    
T  3576637 aatattacttagcaacaacaacatcaatcaaacatgactcttatcacaattcaacaacaacatagcataatccatcaatttgagcata 3576550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 17204748 - 17204823
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||| ||||||||||||||||||| ||||||||||||||   ||| ||||||||||||  |||||||||||||||    
T  17204748 aatattacttagcaacaacaacatccattaaacatgattcctatcacaattcaacaacaatatagcataattcaac 17204823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 39656574 - 39656661
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||| ||||||||| ||||||| |||    | |||||||||||| |||||||||||||||| | |||||||||    
T  39656574 aatatcacttagcaacaaccacatcaattgaacatgaatcttacaacaattcaacaacaacatagcataattcaacaatttgagcata 39656661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 41661625 - 41661688
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| | ||||||| ||||||||    
T  41661625 caacaacaacatcaattaaacatgattctcatcacaattcaacaataacatagcacaattcaac 41661688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 17191595 - 17191676
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||| |||||||||||||||||||||||  ||| |||||| ||||| |||| ||||||||| | | |||||||||    
T  17191595 acttagcaacagcaacatcaattaaacatgattcttatcacaattcagcaacaacataacataattcatcaatttgagcata 17191676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 12488922 - 12488838
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| |||| ||||||||| | | |||||||||    
T  12488922 atcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacataacataattcatcaatttgagcata 12488838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 12560432 - 12560348
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||| ||| | ||||| ||   ||| |||||||||||| |||||||||||||||||| ||| |||||    
T  12560432 atcacttagcaacaacaacatccattgatcatgaatcatatcacaattcaacaacaacatagcataattcaaccagttgggcata 12560348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 14059409 - 14059325
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||| ||||||||| |||||||||| ||||||| | |  ||| |||||||||||| |||||||||||||| | |||||||||||    
T  14059409 atcacatagcaacaataacatcaattgaacatgaatattatcacaattcaacaacaacatagcataattcatcaaattgagcata 14059325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 31412532 - 31412457
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| ||||||||||||||||||||| | |||||| ||| |||||||||||| |||| || ||||||||    
T  31412532 aatatctcttaacaacaacaacatcaattaaacctaattctcatcacaattcaacaacaacatatcacaattcaac 31412457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 43427703 - 43427640
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||| |||||||||| ||| || ||||||||| ||||||| ||||||||    
T  43427703 caacaacaacatcaattaatcatgattctcatcacaactcaacaacaacatagcacaattcaac 43427640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 50313235 - 50313298
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcata 76  Q
    |||||| |||| |||||||||||||||||||||||||||| | ||| |||||||||||| ||||    
T  50313235 aatatctcttaacaacaacaacatcaattaaacatgattcccatcacaattcaacaacaacata 50313298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 11638418 - 11638480
Alignment:
Q  26 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||||||||||||||||| |||| ||| || ||||||||| ||||||| ||||||||    
T  11638418 aacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacatagcacaattcaac 11638480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 1990851 - 1990924
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 86  Q
    |||||| |||| |||||||||||||| ||||||||||||||| ||| | |||||||||| |||| || ||||||    
T  1990851 aatatctcttaacaacaacaacatcatttaaacatgattctcatcacagttcaacaacaacataacacaattca 1990924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 38811204 - 38811152
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaaca 68  Q
    |||||||||||||||||||||||||| ||||||| ||||  ||||||||||||    
T  38811204 atcacttagcaacaacaacatcaattgaacatgaatctcagcataattcaaca 38811152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 55441045 - 55440961
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||| |||||||||||||| | |||||  ||  ||| |||||||| ||| ||||| |||||||||||| |||||||||    
T  55441045 atcacttagcatcaacaacatcaattgatcatgaaacttatcacaattcaaccacaacatagtataattcaaccagttgagcata 55440961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 54424064 - 54424146
Alignment:
Q  17 tcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||| ||||||||||||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  54424064 tcacttagcaataacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 54424146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 38375865 - 38375804
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 86  Q
    ||||||||||||||||||||||||| ||||  || | |||||||||| ||||||| ||||||    
T  38375865 caacaacaacatcaattaaacatgaatctcaccacatttcaacaacaacatagcacaattca 38375804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 17100704 - 17100787
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||| |||||| |||||||||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  17100704 atcacttaacaacaataacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 17100787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 17101389 - 17101472
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||| |||||| |||||||||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  17101389 atcacttaacaacaataacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 17101472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 47784943 - 47784871
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||| ||||||||||||||| | |||||| ||||    | |||||||||||| ||||||||||||||||    
T  47784943 atcacttaacaacaacaacatcaactgaacatgtttcttactacaattcaacaacaacatagcataattcaac 47784871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 10912945 - 10913008
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||| ||||  || | |||||| ||| ||||||| ||||||||    
T  10912945 caacaacaacatcaattaaacatgaatctcaccacatttcaaccacaacatagcacaattcaac 10913008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 12349726 - 12349652
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||| | |||||  ||  ||| |||||||||||| || |||||||||| ||||||||||||||    
T  12349726 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattc-accaattgagcata 12349652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 15876119 - 15876174
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaaca 71  Q
    |||||||| ||||||||||||||||| ||||||| |||  ||| ||||||||||||    
T  15876119 atcacttaccaacaacaacatcaattgaacatgaatcttatcacaattcaacaaca 15876174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 17523082 - 17523002
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||   |||||  ||  ||| |||||| ||| | ||||||||||||| ||||||||||||||    
T  17523082 acttagcaacaacaacatcaattggtcatgaaacttatcacaattcatcaataacatagcataattc-accaattgagcata 17523002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 38167965 - 38168048
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||| ||||||||||||| ||| | |||||  ||  | | |||||| ||||| ||||||||||||| ||||||||||||||    
T  38167965 atcacttaacaacaacaacatctattgatcatgaaacttattacaattcatcaacaacatagcataattc-accaattgagcata 38168048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 33924 - 33840
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| ||||||||||||||||||||| ||||||    
T  33924 atcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaatttagcata 33840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 4611 - 4698
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||||||||| || |||| | |  ||| |||| ||||||| ||||||||||||||||||||||||||||    
T  4611 aatatcacttagcaacaacaacatcaattgaaaatgaatattatcacaattaaacaacaacatagcataattcaaccaattgagcata 4698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 9225 - 9312
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||||||||| || |||| | |  ||| |||| ||||||| ||||||||||||||||||||||||||||    
T  9225 aatatcacttagcaacaacaacatcaattgaaaatgaatattatcacaattaaacaacaacatagcataattcaaccaattgagcata 9312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 5988 - 6075
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||||||||| ||||||| | |  ||| |||||||||||  |||||||||||| |||||||||||||||    
T  5988 aatatcacttagcaacaacaacatcaattgaacatgaatattatcacaattcaacaaccacatagcataatttaaccaattgagcata 6075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 77046 - 76971
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||| ||||||| ||||  || |||||||||||| ||||||||||||||||    
T  77046 aatatcacttagcaacaacaacatcaattgaacatgaatctcaccacaattcaacaacaacatagcataattcaac 76971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 69505 - 69580
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||| |||||||||||| ||||||| ||||||||    
T  69505 aatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcacaattcaac 69580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 11145 - 11229
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||| |||||||||||||||||||| |||||| ||||| ||||||||||||||||  |||||||| |||||| | |||||||||    
T  11145 atcacatagcaacaacaacatcaattgaacatggttctcatcataattcaacaacaagatagcatatttcaactatttgagcata 11229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 9078 - 8994
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| | |||||  ||  ||| |||| ||||||| ||||||||||||||||||||||||||||    
T  9078 atcacttagcaacaacaacatcaattgatcatgaaacttatcacaatttaacaacaacatagcataattcaaccaattgagcata 8994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 2512 - 2428
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| |||||||||||||| | | |||||||||    
T  2512 atcacttaggaacaacaacatcaattgaacatgagtcttatcataattcaacaacaacatagcataattcatcaatttgagcata 2428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 70502 - 70418
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||| ||||||||||||| |||||| | ||| ||||||||||||||||  ||| ||||||||| |||||||||||||    
T  70502 atcacttagcaataacaacatcaattgaacatggtcctcatcataattcaacaacaatataacataattcacccaattgagcata 70418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 159350 - 159434
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| | |||||  ||  ||| ||||||||| || ||||||||||||||||||||||||||||    
T  159350 atcacttagcaacaacaacatcaattgatcatgaaacttatcacaattcaacatcaacatagcataattcaaccaattgagcata 159434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 85386 - 85466
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||| | |||||  ||  ||| |||||| ||||| | ||||||||||| ||||||| ||||||    
T  85386 acttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacctagcataattc-accaattaagcata 85466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 7874 - 7799
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| || ||||||||| ||||||| ||||||||    
T  7874 aatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacatagcacaattcaac 7799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 30012 - 30087
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||| | ||||||| ||||||||    
T  30012 aatatcgcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaaaaacatagcacaattcaac 30087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 22047 - 22122
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| ||||||||||||||||||||||||| |||| ||| |||||||||||| ||||||  ||||||||    
T  22047 aatatctcttaacaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacatagcccaattcaac 22122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 197452 - 197377
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||| |||||||||||| ||||| | ||||||||    
T  197452 aatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacataggacaattcaac 197377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 2506 - 2572
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataa 82  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||||||||||||| |||| |||||    
T  2506 atcacttagcaacaacaacatcaattgaacatggttctcatcataattcaacaacaacatatcataa 2572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 11739 - 11821
Alignment:
Q  17 tcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcat 99  Q
    ||||||||||||||||||||||||| | |||||  ||  ||| ||||| |||||| |||||||||||||||||||||||||||    
T  11739 tcacttagcaacaacaacatcaattgatcatgaaacttatcacaattctacaacaacatagcataattcaaccaattgagcat 11821  T

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Target: scaffold0025 (Bit Score: 46; Significance: 5e-17; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 85581 - 85654
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 86  Q
    |||||| |||||||||||||| |||| ||||||||||||||| |||||||||||||||| |||| || ||||||    
T  85581 aatatctcttagcaacaacaatatcacttaaacatgattctcatcataattcaacaacaacataacacaattca 85654  T

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Target: scaffold0025; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 53398 - 53465
Alignment:
Q  17 tcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 84  Q
    ||||||||||||||||||||| ||| ||||||| |||| ||| |||||| |||||  |||||||||||    
T  53398 tcacttagcaacaacaacatccattgaacatgaatctcatcacaattcatcaacaaaatagcataatt 53465  T

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Target: scaffold0025; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 146652 - 146735
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||| ||||||||||||| ||| | |||||  ||  ||| |||||| ||||| | ||||||||||| ||||||||||||||    
T  146652 atcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacctagcataattc-accaattgagcata 146735  T

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Target: scaffold0010 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 31070 - 31143
Alignment:
Q  15 tatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||||| ||||||| |||| ||| |||||||||| | ||||||| ||||||||    
T  31070 tatcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaagaacatagcacaattcaac 31143  T

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Target: scaffold0389 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 10713 - 10797
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||| ||||||||||||| |||||| ||||| ||||||||| |||||| | || |||||| ||||||||| ||||||    
T  10713 atcacttagcaaaaacaacatcaattgaacatggttctcatcataattcgacaacaacgtatcataatccaaccaattaagcata 10797  T

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Target: scaffold0383 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 7219 - 7307
Alignment:
Q  13 aatatcacttagcaacaacaacatc-aattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||||| |||| || |||| | |  ||| |||| ||||||| ||||||||||||||||||||||||||||    
T  7219 aatatcacttagcaacaacaacatccaattgaaaatgaatattatcacaattaaacaacaacatagcataattcaaccaattgagcata 7307  T

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Target: scaffold0598 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 3300 - 3374
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| ||||||||||||||||||||||||||| || ||| |||||||||||| ||||||| ||||||||    
T  3300 aatatctcttaacaacaacaacatcaattaaacatgatt-tcatcacaattcaacaacaacatagcacaattcaac 3374  T

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Target: scaffold0151 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 22621 - 22534
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||| ||| |||||||||||||||||||||||||||| | ||  |||||||||||| ||||||| |||||||  | |||||||||    
T  22621 aatatcaattaacaacaacaacatcaattaaacatgattcacatctcaattcaacaacaacatagcacaattcaataatttgagcata 22534  T

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Target: scaffold0148 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 37606 - 37681
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||  |||||||||| | ||||||| ||||||||    
T  37606 aatatctcttaacaacaacaacatcaattaaacatgattctcgtctcaattcaacaataacatagcacaattcaac 37681  T

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Target: scaffold0125 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 41700 - 41778
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattga 95  Q
    |||| ||| ||||||||||||||||| |||||| ||||| |||||||||||||||| ||||||| ||||| |||||||||    
T  41700 atcatttaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattc-accaattga 41778  T

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Target: scaffold0031 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 97397 - 97322
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||| |||| |||||||| ||||||| ||||||| |||| ||||||||||||| || ||||||||||||||||    
T  97397 aatatcaattagtaacaacaatatcaattgaacatgaatctcatcataattcaacaccaacatagcataattcaac 97322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 70676 - 70748
Alignment:
Q  28 caacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||| | |||||  ||  ||| |||||||||||| || |||||||||||||||||| ||||||    
T  70676 caacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaaccaattaagcata 70748  T

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Target: scaffold0004 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 27545 - 27620
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||||| ||||||||||||||||||||| ||| ||||||||||||  |||||| ||||||||    
T  27545 aatatctcttaacaacaacatcatcaattaaacatgattctcatcacaattcaacaacaatatagcacaattcaac 27620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 86405 - 86480
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||| |||| |||||| |||||||||||||||||||| || ||| |||| ||| | | ||||||| ||||||||    
T  86405 aatatctcttaacaacaaaaacatcaattaaacatgattatcatcacaattgaactataacatagcacaattcaac 86480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 360 - 442
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 98  Q
    |||||||||||||||||||||||||| ||||||| |||   || |||||||||| | |||||||||||||||| | |||||||    
T  360 atcacttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaataacatagcataattcaacaatttgagca 442  T

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Target: scaffold0132 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 13558 - 13628
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 86  Q
    |||| ||| ||||||||||||||||| |||||| ||||| |||||||||||||||| ||||||| ||||||    
T  13558 atcaattaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattca 13628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 1970 - 2050
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||| | ||||| |||  | | || ||||||||| ||||||||||||||||||||||||||||    
T  1970 acttagcaacaacaacatcaattgatcatgaatcttataacaaatcaacaaca-catagcataattcaaccaattgagcata 2050  T

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Target: scaffold0193 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 4660 - 4728
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||| |||||||||||||||||||||||||||| | ||| |||||||||||| |||| || ||||||||    
T  4660 cttaacaacaacaacatcaattaaacatgattcccatcacaattcaacaacaacataacacaattcaac 4728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 28587 - 28671
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||||| ||||| |||||    | |||||||||||| |||| ||||||||||| | |||||||||    
T  28587 atcacttagcaacaacaacatcaattgaacataattcttactacaattcaacaacaacataccataattcaacaatttgagcata 28671  T

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Target: scaffold0092 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 3370 - 3454
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||| ||||||||||| | ||||| |||  ||| |||||||| ||| ||||||||||||  ||||||||||||||    
T  3370 atcacttagcaacatcaacatcaattgatcatgaatcttatcacaattcaactacaacatagcataattggaccaattgagcata 3454  T

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Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 103118 - 103034
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||| ||||| |||||||||| ||||||| | |  ||| |||||||||||| |||||||||||||||| |||| ||||||    
T  103118 atcacttagaaacaataacatcaattgaacatgaatgttatcacaattcaacaacaacatagcataattcaacaaatttagcata 103034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 109641 - 109725
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||||||||||||| | | ||||| |||  ||| |||||||||||| ||||||| |||||||| | |||||||||    
T  109641 atcacttagcaacaacaacatcaactgatcatgaatcttatcacaattcaacaacaacatagcaaaattcaacaatttgagcata 109725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 68145 - 68082
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||| ||||  || | |||||||||| |||| || ||||||||    
T  68145 caacaacaacatcaattaaacatgaatctcaccacatttcaacaacaacataacacaattcaac 68082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 131891 - 131939
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaaca 68  Q
    |||| ||||||||||| ||||||| |||||||||| ||| |||||||||    
T  131891 cttaacaacaacaacaacaattaagcatgattctcatcacaattcaaca 131939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 1733 - 1658
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||| |||||| | |||| ||||| |||||||||||||||| |||||||||||||| ||| |||| ||||    
T  1733 caacaacaacttcaattgagcatggttctcatcataattcaacaacaacatagcataattcacccatttgaacata 1658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 8878 - 8803
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||| |||||| | |||| ||||| |||||||||||||||| |||||||||||||| ||| |||| ||||    
T  8878 caacaacaacttcaattgagcatggttctcatcataattcaacaacaacatagcataattcacccatttgaacata 8803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 14096 - 14159
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| | | ||| ||||||||||    
T  14096 caacaacaacatcaattaaacatgattctcatcacaattcaacaataacgtagtataattcaac 14159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 7224 - 7137
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||||| |||||||||||||| |||||||||||  ||| ||| ||| |||| |||| ||||||| ||| | |||||||||    
T  7224 aatatcacttagcagcaacaacatcaattgaacatgattcttatcacaatccaataacaacataacataattaaacaatttgagcata 7137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 8388 - 8332
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacat 72  Q
    |||| ||| ||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  8388 atcaattaacaacaacaacatcaattgaacatggttctcatcataattcaacaacat 8332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 51382 - 51312
Alignment:
Q  27 acaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 98  Q
    |||||||||||||||||||||||||||| ||| |||||| ||||  |||| |||||||| ||||||||||||    
T  51382 acaacaacatcaattaaacatgattctcatcacaattcatcaaccacataacataattc-accaattgagca 51312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 17520 - 17462
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaaca 71  Q
    |||||| |||| | |||||||||||||||||||||||||||| ||| ||||||||||||    
T  17520 aatatctcttaaccacaacaacatcaattaaacatgattctcatcacaattcaacaaca 17462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 22599 - 22541
Alignment:
Q  42 aaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||| ||||| |||||||||||||||| | |||||||||||| |||||||||||||    
T  22599 aaacatggttctcatcataattcaacaacaacttagcataattcacccaattgagcata 22541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 61433 - 61375
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaaca 71  Q
    |||||| |||| | |||||||||||||||||||||||||||| ||| ||||||||||||    
T  61433 aatatctcttaaccacaacaacatcaattaaacatgattctcatcacaattcaacaaca 61375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 21566 - 21646
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||| ||| |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  21566 acttagcaacaacaacatcaaataatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 21646  T

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Target: scaffold0103 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 33710 - 33783
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 86  Q
    ||||||||||||||||||||||||||||| | |||||  ||  ||| |||||| ||||| ||||||||||||||    
T  33710 aatatcacttagcaacaacaacatcaattgatcatgaaacttatcaaaattcatcaacaacatagcataattca 33783  T

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Target: scaffold0601 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 1061 - 998
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||||||||||||| ||||  || | |||||||||| ||||||| ||||||||    
T  1061 caacaacaacatcaattaaacatgaatctccccacatttcaacaacaacatagcacaattcaac 998  T

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Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 46213 - 46299
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||||||| |||||||||||| ||| | |||||  ||  ||| |||| ||||||| ||||||||||||| ||||||||||||||    
T  46213 aatatcacttagaaacaacaacatccattgatcatgaaacttatcacaatttaacaacaacatagcataattc-accaattgagcata 46299  T

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Target: scaffold0034; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 40706 - 40792
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||||| ||| | |||||  ||  ||| |||  |||||||  |||||||||||| ||||||||||||||    
T  40706 aatatcacttagcaacaacaacatccattgatcatgaaacttatcacaatgtaacaacaatatagcataattc-accaattgagcata 40792  T

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Target: scaffold0610 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 769 - 689
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||| ||||||||    
T  769 acttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaaatgagcata 689  T

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Target: scaffold0153 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 1882 - 1934
Alignment:
Q  13 aatatcacttagcaacaacaacatcaattaaacatgattctcttcataattca 65  Q
    |||||| |||| ||||| |||||||||||||||||||||||| ||| ||||||    
T  1882 aatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattca 1934  T

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Target: scaffold0037 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 24924 - 24841
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||||| ||||||||||||| ||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  24924 atcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 24841  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 108065 - 108132
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    |||| ||||||||||||||||||||||||||  || ||| |||||||||| | || |||||||||||||    
T  108065 cttaacaacaacaacatcaattaaacatgatcttcatcacaattcaacaataaca-agcataattcaac 108132  T

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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 35529 - 35601
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 88  Q
    ||||||||||||||| |||||||||| ||||||| |||   || | |||||||||| |||||||||| |||||    
T  35529 atcacttagcaacaaaaacatcaattgaacatgactcttaccacatttcaacaacaacatagcataaatcaac 35601  T

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Target: scaffold1867 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 204 - 278
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||| | |||||  ||  ||| |||||||||||| || |||||||||| ||||||||||||||    
T  204 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattc-accaattgagcata 278  T

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Target: scaffold0387 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Complemental strand, 1138 - 1107
Alignment:
Q  20 cttagcaacaacaacatcaattaaacatgatt 51  Q
    ||||||||||||||||||||||||||||||||    
T  1138 cttagcaacaacaacatcaattaaacatgatt 1107  T

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Target: scaffold0190 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 9997 - 10071
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||| | |||||  ||  ||| |||||||||||| || |||||||||| ||||||||||||||    
T  9997 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattc-accaattgagcata 10071  T

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Target: scaffold0026 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 90050 - 89975
Alignment:
Q  25 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||| |||||| |  || |||||||||||||| |  |||||||||| ||  ||||||||||||    
T  90050 caacaacaacatcaattgaacatggtcttcatcataattcaacaataatatagcataatccactcaattgagcata 89975  T

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Target: scaffold0483 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 6712 - 6794
Alignment:
Q  16 atcacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 98  Q
    ||||||||| |  ||||||||||||| ||||||| |||   || |||||||||| | |||||||||||||||| | |||||||    
T  6712 atcacttaggagtaacaacatcaattgaacatgactcttaccacaattcaacaatagcatagcataattcaacaatttgagca 6794  T

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Target: scaffold0396 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 11901 - 11821
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||| | |||||  ||  ||| |||||| ||||| ||  ||||||||| ||||||||||||||    
T  11901 acttagcaacaacaacatcaattgatcatgaaacttatcaaaattcatcaacaacaatgcataattc-accaattgagcata 11821  T

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Target: scaffold0195 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 711 - 631
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    |||||| |||||||||||||||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||| ||||||||    
T  711 acttagtaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaaatgagcata 631  T

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Target: scaffold0075 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 4995 - 5075
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||||| | |||||  ||  ||| |||||||||||| || | |||||||| ||||||| ||||||    
T  4995 acttagcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaatcataattc-accaattaagcata 5075  T

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Target: scaffold0035 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 118156 - 118076
Alignment:
Q  19 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 100  Q
    ||||||||||||||||||||| | | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||| ||||    
T  118156 acttagcaacaacaacatcaactgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgaacata 118076  T

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