View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16814_high_11 (Length: 309)
Name: NF16814_high_11
Description: NF16814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16814_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 2 - 294
Target Start/End: Complemental strand, 12327752 - 12327459
Alignment:
| Q |
2 |
taatgttaaaatttattaaatatagataagaaaaaa-ggaagcaatgaaacttagcctagccctttatttttctaactcctagaaaaaccaatcccaacc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12327752 |
taatgttaaaatttattaaatatagataagaaaaaaaggaagcaatgaaacttagcctagccctttatttttctaactcctagaaaaaccaatcccaacc |
12327653 |
T |
|
| Q |
101 |
tagccatctacacaactgatcgggaatagccttacgctttaaaagattttgacgcgtagggaccccgtcaagtagtaactgcactttcgaggaggcccat |
200 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
12327652 |
tagccatctacacaactgatcgggaatagccttatgctttaaaagattttgacgcgtagggaccccgtcaagtagtaactgcactttcgagggggcccat |
12327553 |
T |
|
| Q |
201 |
ctacgcctaaccaatttcaaggatttcaaaacatcgaccaatccagcctcccagggccgcataggccaaatggacagaatacttcctgtctgtg |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12327552 |
ctacgcctaaccaatttcaaggatttcaaaacatcgaccaatccagcctcccagggccgcataggccaaatggacagaatacttcctgtctgtg |
12327459 |
T |
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