View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16814_low_10 (Length: 341)

Name: NF16814_low_10
Description: NF16814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16814_low_10
NF16814_low_10
[»] chr6 (24 HSPs)
chr6 (20-177)||(9953036-9953193)
chr6 (14-173)||(23388989-23389149)
chr6 (14-173)||(23379650-23379810)
chr6 (22-177)||(5739034-5739190)
chr6 (68-143)||(13004434-13004509)
chr6 (22-129)||(34501462-34501569)
chr6 (20-176)||(2371414-2371570)
chr6 (96-177)||(28666095-28666176)
chr6 (86-177)||(10289186-10289277)
chr6 (68-177)||(31071494-31071603)
chr6 (107-162)||(20181288-20181343)
chr6 (107-162)||(22154648-22154703)
chr6 (70-131)||(6512442-6512503)
chr6 (68-131)||(28112641-28112704)
chr6 (140-177)||(12981151-12981188)
chr6 (79-127)||(12991556-12991604)
chr6 (138-177)||(9314765-9314804)
chr6 (138-177)||(21633551-21633590)
chr6 (138-177)||(22463515-22463554)
chr6 (138-177)||(28116940-28116979)
chr6 (138-175)||(9840320-9840357)
chr6 (137-177)||(2378435-2378475)
chr6 (28-60)||(13004611-13004643)
chr6 (137-177)||(15543215-15543255)
[»] chr3 (34 HSPs)
chr3 (14-177)||(35411676-35411840)
chr3 (14-177)||(6921890-6922053)
chr3 (14-177)||(23299390-23299553)
chr3 (14-177)||(16185493-16185656)
chr3 (20-177)||(538015-538172)
chr3 (14-177)||(52198305-52198468)
chr3 (20-177)||(10884018-10884175)
chr3 (14-177)||(18645578-18645741)
chr3 (86-177)||(53814971-53815062)
chr3 (52-177)||(10107489-10107614)
chr3 (23-177)||(29344618-29344773)
chr3 (67-177)||(3839790-3839903)
chr3 (86-177)||(16243166-16243257)
chr3 (86-176)||(9380012-9380102)
chr3 (87-177)||(54460367-54460457)
chr3 (87-177)||(34984668-34984758)
chr3 (68-177)||(19302255-19302364)
chr3 (90-177)||(10880776-10880863)
chr3 (86-177)||(41976321-41976412)
chr3 (86-169)||(54736759-54736842)
chr3 (96-177)||(20729395-20729477)
chr3 (85-174)||(43808881-43808970)
chr3 (79-155)||(31548573-31548649)
chr3 (73-177)||(17532565-17532669)
chr3 (75-156)||(19305445-19305526)
chr3 (14-155)||(22994429-22994570)
chr3 (49-93)||(55032789-55032833)
chr3 (14-65)||(9380143-9380194)
chr3 (141-177)||(31857055-31857091)
chr3 (137-177)||(50462415-50462455)
chr3 (138-177)||(9157508-9157547)
chr3 (139-177)||(2280741-2280779)
chr3 (139-177)||(42355298-42355336)
chr3 (137-177)||(43926124-43926164)
[»] chr7 (23 HSPs)
chr7 (14-177)||(8276012-8276175)
chr7 (14-177)||(26556510-26556673)
chr7 (14-177)||(10431386-10431549)
chr7 (22-177)||(4542074-4542229)
chr7 (22-177)||(2442122-2442277)
chr7 (86-177)||(45288047-45288138)
chr7 (86-177)||(45291383-45291474)
chr7 (67-177)||(20081530-20081640)
chr7 (79-177)||(17729973-17730071)
chr7 (86-177)||(9865551-9865642)
chr7 (86-177)||(9080376-9080467)
chr7 (86-177)||(10344616-10344707)
chr7 (86-177)||(4596833-4596924)
chr7 (86-177)||(4694723-4694814)
chr7 (24-146)||(9273882-9274003)
chr7 (68-177)||(16164889-16164998)
chr7 (68-177)||(48644616-48644725)
chr7 (68-177)||(6602621-6602730)
chr7 (108-177)||(48645852-48645921)
chr7 (137-177)||(37167030-37167070)
chr7 (139-177)||(11826392-11826430)
chr7 (96-126)||(18563366-18563396)
chr7 (148-177)||(13450736-13450765)
[»] chr5 (26 HSPs)
chr5 (14-177)||(43490793-43490956)
chr5 (14-177)||(42061486-42061649)
chr5 (14-177)||(22937892-22938055)
chr5 (22-177)||(32837083-32837238)
chr5 (14-177)||(37214766-37214929)
chr5 (14-177)||(28442018-28442181)
chr5 (14-177)||(31862872-31863035)
chr5 (49-177)||(14376706-14376834)
chr5 (85-177)||(28788309-28788401)
chr5 (68-177)||(14016927-14017036)
chr5 (86-177)||(21336650-21336742)
chr5 (86-177)||(21827949-21828041)
chr5 (68-177)||(17747617-17747726)
chr5 (86-175)||(39191333-39191422)
chr5 (86-177)||(40916795-40916889)
chr5 (86-177)||(18031710-18031801)
chr5 (23-172)||(4100278-4100431)
chr5 (113-177)||(7270241-7270305)
chr5 (96-155)||(2836702-2836761)
chr5 (96-177)||(30065562-30065643)
chr5 (86-143)||(2837584-2837641)
chr5 (128-177)||(25329456-25329505)
chr5 (68-131)||(7624303-7624366)
chr5 (137-177)||(41307405-41307445)
chr5 (14-65)||(21336558-21336609)
chr5 (86-126)||(33551385-33551425)
[»] chr4 (48 HSPs)
chr4 (14-177)||(15431164-15431327)
chr4 (14-177)||(15437778-15437941)
chr4 (14-177)||(18910604-18910767)
chr4 (20-177)||(33410805-33410962)
chr4 (25-177)||(3798644-3798796)
chr4 (27-177)||(5669628-5669778)
chr4 (14-177)||(5721808-5721971)
chr4 (14-177)||(19865480-19865643)
chr4 (22-177)||(5680469-5680624)
chr4 (14-177)||(9716951-9717114)
chr4 (59-177)||(14571026-14571144)
chr4 (14-176)||(19861124-19861286)
chr4 (28-177)||(12237354-12237503)
chr4 (27-177)||(49269735-49269885)
chr4 (14-127)||(40617649-40617762)
chr4 (49-177)||(37104113-37104241)
chr4 (86-169)||(21418987-21419070)
chr4 (14-131)||(53093767-53093884)
chr4 (86-177)||(3718336-3718427)
chr4 (86-177)||(12782106-12782197)
chr4 (242-333)||(18449140-18449231)
chr4 (86-169)||(40794200-40794283)
chr4 (68-177)||(29323979-29324088)
chr4 (68-177)||(44809795-44809904)
chr4 (89-177)||(44164001-44164090)
chr4 (96-177)||(52007350-52007431)
chr4 (86-177)||(15430674-15430766)
chr4 (86-177)||(15437288-15437380)
chr4 (86-177)||(27013229-27013321)
chr4 (96-177)||(53010377-53010458)
chr4 (86-177)||(27677874-27677966)
chr4 (86-177)||(24044966-24045057)
chr4 (71-172)||(34320738-34320839)
chr4 (69-177)||(56198029-56198137)
chr4 (86-177)||(19826701-19826793)
chr4 (86-177)||(27691933-27692025)
chr4 (96-177)||(19819950-19820032)
chr4 (68-177)||(56194722-56194831)
chr4 (96-177)||(35509201-35509280)
chr4 (68-177)||(47114776-47114885)
chr4 (72-177)||(15405793-15405898)
chr4 (68-177)||(33926121-33926230)
chr4 (68-131)||(15812973-15813036)
chr4 (86-127)||(37741471-37741512)
chr4 (137-177)||(38284375-38284415)
chr4 (149-177)||(17669447-17669475)
chr4 (137-177)||(34018659-34018699)
chr4 (137-177)||(48416408-48416448)
[»] chr8 (24 HSPs)
chr8 (14-177)||(45156755-45156918)
chr8 (14-177)||(14420864-14421027)
chr8 (14-177)||(5540832-5540995)
chr8 (14-177)||(10663011-10663174)
chr8 (20-177)||(18722152-18722310)
chr8 (28-177)||(33878089-33878238)
chr8 (14-173)||(25595521-25595681)
chr8 (14-142)||(25228049-25228175)
chr8 (14-173)||(25592336-25592496)
chr8 (14-177)||(43682634-43682798)
chr8 (68-177)||(18826725-18826834)
chr8 (23-177)||(12582218-12582372)
chr8 (68-177)||(22174782-22174891)
chr8 (86-177)||(30640505-30640598)
chr8 (242-333)||(15662654-15662745)
chr8 (68-177)||(14589707-14589816)
chr8 (86-177)||(19792926-19793019)
chr8 (101-177)||(23612569-23612645)
chr8 (107-177)||(5981150-5981220)
chr8 (67-131)||(38249248-38249312)
chr8 (138-177)||(20261647-20261686)
chr8 (138-177)||(21048277-21048316)
chr8 (137-177)||(16952998-16953038)
chr8 (14-62)||(30640624-30640672)
[»] chr1 (22 HSPs)
chr1 (14-177)||(29644145-29644308)
chr1 (14-177)||(2793299-2793462)
chr1 (14-177)||(49499405-49499568)
chr1 (22-177)||(1951190-1951345)
chr1 (79-177)||(41059135-41059234)
chr1 (90-177)||(2404722-2404809)
chr1 (68-177)||(45961598-45961707)
chr1 (68-176)||(27537104-27537212)
chr1 (14-131)||(34733100-34733217)
chr1 (96-177)||(21019287-21019367)
chr1 (86-177)||(42021721-42021812)
chr1 (86-177)||(21108302-21108393)
chr1 (68-177)||(31204014-31204123)
chr1 (68-131)||(6071791-6071854)
chr1 (138-177)||(47708778-47708817)
chr1 (140-177)||(22460406-22460443)
chr1 (137-177)||(45940621-45940661)
chr1 (138-177)||(3088696-3088735)
chr1 (148-177)||(22454290-22454319)
chr1 (140-177)||(49147113-49147150)
chr1 (137-177)||(28110283-28110323)
chr1 (137-177)||(37184743-37184783)
[»] chr2 (34 HSPs)
chr2 (14-177)||(25869835-25869998)
chr2 (14-177)||(25873203-25873366)
chr2 (14-177)||(26358672-26358835)
chr2 (14-177)||(36809272-36809435)
chr2 (14-177)||(38006123-38006286)
chr2 (14-177)||(25139877-25140040)
chr2 (23-177)||(16788389-16788542)
chr2 (14-177)||(25821754-25821922)
chr2 (23-177)||(30275537-30275691)
chr2 (49-177)||(15466170-15466298)
chr2 (86-177)||(10599951-10600042)
chr2 (68-177)||(38014636-38014745)
chr2 (86-177)||(3874482-3874573)
chr2 (68-177)||(31430529-31430638)
chr2 (102-177)||(5665830-5665905)
chr2 (96-177)||(43722904-43722985)
chr2 (89-177)||(13972725-13972813)
chr2 (96-177)||(5104953-5105032)
chr2 (86-175)||(13136764-13136853)
chr2 (49-177)||(29439597-29439723)
chr2 (68-174)||(36985626-36985732)
chr2 (96-177)||(6825974-6826055)
chr2 (68-177)||(45453051-45453160)
chr2 (68-142)||(31428340-31428414)
chr2 (68-177)||(45456300-45456409)
chr2 (137-177)||(9189532-9189572)
chr2 (137-177)||(37280556-37280596)
chr2 (137-177)||(43208769-43208809)
chr2 (139-177)||(31586785-31586823)
chr2 (149-177)||(1504290-1504318)
chr2 (149-177)||(1507492-1507520)
chr2 (137-177)||(8887842-8887882)
chr2 (137-177)||(25957323-25957363)
chr2 (137-177)||(40780658-40780698)
[»] scaffold0035 (1 HSPs)
scaffold0035 (14-177)||(61597-61760)
[»] scaffold0005 (2 HSPs)
scaffold0005 (59-177)||(246232-246350)
scaffold0005 (20-166)||(290974-291120)
[»] scaffold0015 (1 HSPs)
scaffold0015 (61-177)||(197242-197358)
[»] scaffold0757 (1 HSPs)
scaffold0757 (86-177)||(4563-4654)
[»] scaffold0080 (1 HSPs)
scaffold0080 (14-154)||(26277-26408)
[»] scaffold0270 (3 HSPs)
scaffold0270 (86-177)||(969-1060)
scaffold0270 (86-177)||(4329-4420)
scaffold0270 (86-177)||(11459-11550)
[»] scaffold0334 (1 HSPs)
scaffold0334 (53-177)||(18463-18588)
[»] scaffold0381 (1 HSPs)
scaffold0381 (86-177)||(6462-6554)
[»] scaffold0520 (1 HSPs)
scaffold0520 (87-177)||(4790-4880)
[»] scaffold0045 (1 HSPs)
scaffold0045 (71-177)||(88965-89071)
[»] scaffold1993 (1 HSPs)
scaffold1993 (86-177)||(1045-1136)
[»] scaffold1684 (1 HSPs)
scaffold1684 (72-177)||(369-474)
[»] scaffold0567 (1 HSPs)
scaffold0567 (138-177)||(7016-7055)


Alignment Details
Target: chr6 (Bit Score: 127; Significance: 2e-65; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 9953193 - 9953036
Alignment:
Q  20 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 119  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9953193 tgtgctccaaatcgtgacacgttttcaacaatcgtgacatgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 9953094  T
Q  120 gtgaactcaaaaatatcataaaaagacactaaaaatagtg-aatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  9953093 gtgaactcaaaaatatcataaaaagactctaaaaat-gtgaaatgacagactgtcatca 9953036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 14 - 173
Target Start/End: Original strand, 23388989 - 23389149
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttc-aaaatcttctatttttcttggttttcttgctgcttaag 112  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| |||  |||||| |||||    
T  23388989 tcatcatgtgctccaaatcgtgacacgttttcaacaatcgtgacacaattttgctttcttcaaaaatcttctatttttcttgttttctttgctgtttaag 23389088  T
Q  113 cttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtc 173  Q
    ||||| ||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||    
T  23389089 cttgcatgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtc 23389149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 14 - 173
Target Start/End: Original strand, 23379650 - 23379810
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttc-aaaatcttctatttttcttggttttcttgctgcttaag 112  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| |||  ||| || |||||    
T  23379650 tcatcatgtgctccaaatcgtgacacgttttcaacaatcgtgacacaattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaag 23379749  T
Q  113 cttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtc 173  Q
    ||||| ||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||    
T  23379750 cttgcatgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtc 23379810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 22 - 177
Target Start/End: Original strand, 5739034 - 5739190
Alignment:
Q  22 tgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 121  Q
    ||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| |||  |||||||||    
T  5739034 tgctccaaatcgtgacatgtttttaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttagacttgcttgt 5739133  T
Q  122 gaactcaaaaatatcat--aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||| || |||||||  ||||| || ||||||||||||||||||||||||||||||    
T  5739134 gaactc-aacatatcatgaaaaaaaactctaaaaatagtgaatgactgactgtcatca 5739190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 13004509 - 13004434
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa 143  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13004509 tttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa 13004434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 34501569 - 34501462
Alignment:
Q  22 tgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 121  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||| |||  |||||| |||| |||||||||    
T  34501569 tgctccaaatcgtgacacgttttcaacaatcgtgacacaattttgctttcatcaaaatcttctttttttcttgttttctttgctgtttaaacttgcttgt 34501470  T
Q  122 gaactcaa 129  Q
    ||||||||    
T  34501469 gaactcaa 34501462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 2371570 - 2371414
Alignment:
Q  20 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 119  Q
    ||||||| |||||  || || ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||  |||||| |||| |||||||    
T  2371570 tgtgctctaaatctcgatacattttcaacaatcgtgatacgattttgctttcttcaaaatcttctatttttcttgttttatttgctgtttaaacttgctt 2371471  T
Q  120 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatc 176  Q
     ||||||| |||||||||| ||||| ||| |||||||||||||| ||| ||| |||||    
T  2371470 atgaactc-aaaatatcataaaaaaaacattaaaaatagtgaataactaactatcatc 2371414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 28666095 - 28666176
Alignment:
Q  96 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  28666095 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgactgactgtcatca 28666176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 10289277 - 10289186
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  10289277 tttttcttgcttttcttgttgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgacttactgtcatca 10289186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 31071603 - 31071494
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 166  Q
    ||||||||||||||| |||||||| || ||| |||| || ||||||||||| |||||||| |||| ||||| |||| |||||||||||||  ||||||||    
T  31071603 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgctcgtgaactc-aaaacatcatgaaaatgacactaaaaataaagaatgact 31071505  T
Q  167 gactgtcatca 177  Q
    |||||||||||    
T  31071504 gactgtcatca 31071494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 20181343 - 20181288
Alignment:
Q  107 cttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaat 162  Q
    ||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||||    
T  20181343 cttaagcttgcttgtgaactcaaaaatatcacaaaaggactctaaaaatagcgaat 20181288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 22154648 - 22154703
Alignment:
Q  107 cttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaat 162  Q
    ||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||||    
T  22154648 cttaagcttgcttgtgaactcaaaaatatcacaaaaggactctaaaaatagcgaat 22154703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 6512503 - 6512442
Alignment:
Q  70 tcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 131  Q
    |||||||||||||| | ||||| || ||| ||||||| ||||||||||||||||||||||||    
T  6512503 tcttcaaaatcttcaacttttcatgttttccttgctgtttaagcttgcttgtgaactcaaaa 6512442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 28112641 - 28112704
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 131  Q
    |||||||||||||||| | ||||| || ||| ||||||  ||||||||||||||||||||||||    
T  28112641 tttcttcaaaatcttcaacttttcatgctttccttgctttttaagcttgcttgtgaactcaaaa 28112704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 12981151 - 12981188
Alignment:
Q  140 aaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  12981151 aaaagactctaaaaatagtgaatgactgactgtcatca 12981188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 12991556 - 12991604
Alignment:
Q  79 tcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactc 127  Q
    ||||| |||||||||| |||||||| || ||||||||||||||||||||    
T  12991556 tcttcaatttttcttgcttttcttgttgattaagcttgcttgtgaactc 12991604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 9314765 - 9314804
Alignment:
Q  138 taaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  9314765 taaaaagactctaaaaatagtgtatgactgactgtcatca 9314804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 21633590 - 21633551
Alignment:
Q  138 taaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  21633590 taaaaagactctaaaaatagtgtatgactgactgtcatca 21633551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 22463554 - 22463515
Alignment:
Q  138 taaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  22463554 taaaaagactctaaaaatagtgtatgactgactgtcatca 22463515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 28116979 - 28116940
Alignment:
Q  138 taaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  28116979 taaaaagactctaaaaatagtgtatgactgactgtcatca 28116940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 9840320 - 9840357
Alignment:
Q  138 taaaaagacactaaaaatagtgaatgactgactgtcat 175  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  9840320 taaaaagactctaaaaatagtgaatgactggctgtcat 9840357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 2378475 - 2378435
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  2378475 ataaaaagactctaaaaatagcgaatgacggactgtcatca 2378435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 13004611 - 13004643
Alignment:
Q  28 aaatcgtgacacgttttcgacaatcgtgacacg 60  Q
    |||||||||||||||||| ||||||||||||||    
T  13004611 aaatcgtgacacgttttcaacaatcgtgacacg 13004643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 15543255 - 15543215
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  15543255 ataaaaagactctaaaaatagcgaatgacggactgtcatca 15543215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 2e-64; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 35411840 - 35411676
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  35411840 tcatcctgtgttccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttctttgttttcttgctgcttaagt 35411741  T
Q  114 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtg-aatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||||||||||| ||||||||  || |||||| |||||||||||    
T  35411740 ttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgttgaaatgacagactgtcatca 35411676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 6922053 - 6921890
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||  |||||| |||| |    
T  6922053 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttatatttctcttgttttctttgctgtttaaac 6921954  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||||||||    
T  6921953 ttgcttgtgaactc-aaaatatcatgaaaaaggctctaaaaatagtgaatgactgactgtcatca 6921890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 23299390 - 23299553
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||  |||||| |||| |    
T  23299390 tcatcttgtgctccaaattgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttctcttgttttctttgctgtttaaac 23299489  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  23299490 ttgcttgtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 23299553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 16185493 - 16185656
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| ||||||| ||| ||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16185493 tcatcctgtgctctaaaacgtgacatgttttcaacaatcgtgacacgattttgctttcttcaaaatcttatatttttcttgcttttcttgctgcttaagc 16185592  T
Q  114 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||| ||||||||||||||||||||||||||||| ||||||||   ||||||| |||||||||||    
T  16185593 ttgtttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 16185656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 538172 - 538015
Alignment:
Q  20 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 119  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| |||| |||| ||    
T  538172 tgtgctccaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaaacttgttt 538073  T
Q  120 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  538072 gtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 538015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 52198468 - 52198305
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||  ||| || ||||||    
T  52198468 tcatcatgtgctctaaatcgtgacacgttttcaacaatcgtgacatgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagc 52198369  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| |||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  52198368 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaacatagtgaatgactgactgtcatca 52198305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 10884175 - 10884018
Alignment:
Q  20 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 119  Q
    |||||| |||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| |||  |||||| |||| |||||||    
T  10884175 tgtgcttcaaatcgtgacaggttttcaacaatcgtgacacgattttgctttcttcgaaatcttctattttttttgttttcattgctgtttaaacttgctt 10884076  T
Q  120 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  10884075 gtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 10884018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 18645578 - 18645741
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| ||||||    
T  18645578 tcatcctgtgcttcaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagc 18645677  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||| |||||||||   ||||||||| |||| ||||||||||| ||||||||||||| ||||||||    
T  18645678 ttgtttgtgaact-tgaaatatcatgaaaatgacactaaaaacagtgaatgactgattgtcatca 18645741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 53815062 - 53814971
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  53815062 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 53814971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 10107489 - 10107614
Alignment:
Q  52 cgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacacta 150  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  ||| || |||||||||||||||||||| |||||||||| |||| |||||||    
T  10107489 cgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaagcttgcttgtgaactc-aaaatatcatgaaaatgacacta 10107587  T
Q  151 aaaatagtgaatgactgactgtcatca 177  Q
    |||| ||||||||||||||||||||||    
T  10107588 aaaacagtgaatgactgactgtcatca 10107614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 23 - 177
Target Start/End: Original strand, 29344618 - 29344773
Alignment:
Q  23 gctccaaatcgtgacacgtttt-cgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 121  Q
    ||||||||||||| |||||||| | | ||||||||||||||    |||| ||||   ||||| |||||||||| |||||||||||||||| |||||||||    
T  29344618 gctccaaatcgtgtcacgtttttcaataatcgtgacacgatccc-cttttttcagtttcttcaatttttcttgcttttcttgctgcttaatcttgcttgt 29344716  T
Q  122 gaactcaaaaatatcataa-aaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  29344717 gaactcaaaaatatcataagaaagactctaaaaatagtgaatgactgactgtcatca 29344773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 3839903 - 3839790
Alignment:
Q  67 ctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat---aaaaagacactaaaaatagtgaatg 163  Q
    ||||||||||  |||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||   ||||| || ||||||||||||||||    
T  3839903 ctttcttcaatttcttcggtttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcattaaaaaaaaactctaaaaatagtgaatg 3839804  T
Q  164 actgactgtcatca 177  Q
    ||||||||||||||    
T  3839803 actgactgtcatca 3839790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 16243257 - 16243166
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||    
T  16243257 tttttcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgattgtcatca 16243166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 9380102 - 9380012
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatc 176  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  9380102 tttttcttgcttttcttattgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgactgtcatc 9380012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 87 - 177
Target Start/End: Complemental strand, 54460457 - 54460367
Alignment:
Q  87 ttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||  |||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  54460457 ttttctttcttttcttgttgcttaagattgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 54460367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 34984668 - 34984758
Alignment:
Q  87 ttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  34984668 ttttcttgcttttcttgttgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgactgactgtcatca 34984758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 19302255 - 19302364
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 167  Q
    ||||||||||||||||||||||||| | ||| |||| || ||||||||||||||||||||||||||||||||||||||| |||||||||   |||||| |    
T  19302255 tttcttcaaaatcttctatttttctcgctttccttgttgtttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatatgaaatgacgg 19302354  T
Q  168 actgtcatca 177  Q
    ||| ||||||    
T  19302355 actatcatca 19302364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 10880863 - 10880776
Alignment:
Q  90 tcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||  ||| ||||||||||||||    
T  10880863 tcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcaaataactgactgtcatca 10880776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 41976412 - 41976321
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||| ||| ||||||||||| |||| ||||||||||||||||||||||| ||||||| || |||||||||| |||||||||||||||||||    
T  41976412 tttttgttgcttttcttgctgtttaatcttgcttgtgaactcaaaaatattataaaaacactctaaaaatagcgaatgactgactgtcatca 41976321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 54736759 - 54736842
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgac 169  Q
    ||||| ||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||    
T  54736759 ttttttttgcttttcttgttgcttaagcttgcttgtgaactcaaaagtatcataaaaagactctaaaaatagtgaatgattgac 54736842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 20729395 - 20729477
Alignment:
Q  96 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||| || |||||||||| |||||||||||||||||||    
T  20729395 ttttcttgctgcttaagcttgcttgtgaactaaaaaatatcataaaaaaaactctaaaaatagcgaatgactgactgtcatca 20729477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 174
Target Start/End: Complemental strand, 43808970 - 43808881
Alignment:
Q  85 atttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtca 174  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||| ||| |||||||    
T  43808970 attttttttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaataacgaataactaactgtca 43808881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 31548649 - 31548573
Alignment:
Q  79 tcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaat 155  Q
    ||||| |||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  31548649 tcttcaatttttcttgcttttcttactgcttaagcttggttgtgaactcaaaaatatcataaaaagactctaaaaat 31548573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 73 - 177
Target Start/End: Original strand, 17532565 - 17532669
Alignment:
Q  73 tcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactg 171  Q
    |||||||||||| ||||||||| |||  ||| || |||||||||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||    
T  17532565 tcaaaatcttctttttttcttgttttctttgttgtttaagcttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactg 17532663  T
Q  172 tcatca 177  Q
    | ||||    
T  17532664 taatca 17532669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 19305445 - 19305526
Alignment:
Q  75 aaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaata 156  Q
    |||| ||||||||||||| | ||| ||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||    
T  19305445 aaaaacttctatttttctcgctttccttgctgtttaagcttgcttgtgaactcaaaaatattataaaaagactctaaaaata 19305526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 22994429 - 22994570
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgtttt-cgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaag 112  Q
    |||| |||||||||||||||||||||||||| | |||| |||| ||| ||||  |||||  || |||||||  ||||||||| ||| ||||||| |||||    
T  22994429 tcattatgtgctccaaatcgtgacacgtttttcaacaaccgtgtcactatttcactttcaccacaatcttcagtttttcttgctttccttgctgtttaag 22994528  T
Q  113 cttgcttgtgaactcaaaaatatcataaaaagacactaaaaat 155  Q
    |||||||||| |||| |||||||||||| |  |||||||||||    
T  22994529 cttgcttgtggactc-aaaatatcataatattacactaaaaat 22994570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 55032789 - 55032833
Alignment:
Q  49 aatcgtgacacgattttgctttcttcaaaatcttctatttttctt 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  55032789 aatcgtgacacgattttgctttcttcaaaatcttctatttttctt 55032833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 9380194 - 9380143
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgatttt 65  Q
    ||||| ||||||| |||||||||||||||||| |||| ||||||||||||||    
T  9380194 tcatcctgtgctctaaatcgtgacacgttttcaacaaccgtgacacgatttt 9380143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 31857091 - 31857055
Alignment:
Q  141 aaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||| ||||||||||||||||||||||||||||||    
T  31857091 aaagactctaaaaatagtgaatgactgactgtcatca 31857055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 50462415 - 50462455
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  50462415 ataaaaagactctaaaaatagtgaatgacggactgtcatca 50462455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 9157547 - 9157508
Alignment:
Q  138 taaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  9157547 taaaaagactctaaaaatagtgcatgactgactgtcatca 9157508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 2280741 - 2280779
Alignment:
Q  139 aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  2280741 aaaaagactctaaaaatagtgcatgactgactgtcatca 2280779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 42355298 - 42355336
Alignment:
Q  139 aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  42355298 aaaaaaactctaaaaatagtgaatgactgactgtcatca 42355336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 43926164 - 43926124
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  43926164 ataaaaagactctaaaaatagcgaatgacggactgtcatca 43926124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 9e-64; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 8276175 - 8276012
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||    
T  8276175 tcatcatgtgctccaaatcgtgatacgttttcaacaatcatgacacgattttgttttcttcaaaatcttctatttttcttgcttttcttgctgcttgagc 8276076  T
Q  114 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||||||||||| |||||||||  ||||||| |||||||||||    
T  8276075 ttgcttgtgaactcaaaaatatcataaaaagactctaaaaatatggaatgacagactgtcatca 8276012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 26556673 - 26556510
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||| || ||||||    
T  26556673 tcatcatgtgctctaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagc 26556574  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  26556573 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 26556510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 10431549 - 10431386
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||| |||  |||||| |||| |    
T  10431549 tcatcctgtgctctaaatcgtgacacgttttcaacaatcgtgacacaattttgctttcttcaaaatcttatatttttcttgttttctttgctgtttaaac 10431450  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  10431449 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 10431386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 22 - 177
Target Start/End: Complemental strand, 4542229 - 4542074
Alignment:
Q  22 tgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 121  Q
    ||||||||||| |||||| ||||| ||||||||||||| | ||||||||| |||||||||||||||||||||| |||  |||||| |||| |||||||||    
T  4542229 tgctccaaatcatgacacattttcaacaatcgtgacacaaatttgctttcctcaaaatcttctatttttcttgttttctttgctgtttaaacttgcttgt 4542130  T
Q  122 gaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  4542129 gaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 4542074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 22 - 177
Target Start/End: Original strand, 2442122 - 2442277
Alignment:
Q  22 tgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 121  Q
    |||| |||||||||| |||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||| |||  |||||| |||| |||||||||    
T  2442122 tgcttcaaatcgtgatacgttttcaacaatcgtgacacgaatttgctttcctcagaatcttctatttttcttgttttctttgctgtttaaacttgcttgt 2442221  T
Q  122 gaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||| |||||||||| |||| |||||| |||||||||||||||||||||||||||    
T  2442222 gaactc-aaaatatcatgaaaatgacacttaaaatagtgaatgactgactgtcatca 2442277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 45288047 - 45288138
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45288047 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 45288138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 45291383 - 45291474
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45291383 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 45291474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 20081530 - 20081640
Alignment:
Q  67 ctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgact 166  Q
    ||||||||||  ||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  20081530 ctttcttcaatttctttgatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaacactctaaaaatagtgaatgact 20081629  T
Q  167 gactgtcatca 177  Q
    |||||||||||    
T  20081630 gactgtcatca 20081640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 17730071 - 17729973
Alignment:
Q  79 tcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  17730071 tcttcgatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaggactctaaaaatagtgaaagactgactgtcatca 17729973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 9865551 - 9865642
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  9865551 tttttcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgactgtcatca 9865642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 9080467 - 9080376
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||  |||||||| ||||||||||    
T  9080467 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaattacataaaaagactctaaaaataacgaatgactaactgtcatca 9080376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 10344707 - 10344616
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| |||| |||||| |||||||    
T  10344707 ttttttttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatttcataagaagactctaaaaatagcgaattactgacagtcatca 10344616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 4596833 - 4596924
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||| ||||||| ||| ||||||| |||||||||||||||||||||| |||||||||  |||||| ||||||||||||    
T  4596833 tttttcttgcttttcttgttgcttaatctttcttgtgagctcaaaaatatcataaaaagactctaaaaataacgaatgattgactgtcatca 4596924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 4694814 - 4694723
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||   ||||||||||| ||||||    
T  4694814 tttttcttacttttcttgctgcttaatcttgcttgtgaactcaaaaatatcatagaaagactctaaaaataacaaatgactgactttcatca 4694723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 9273882 - 9274003
Alignment:
Q  24 ctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtga 123  Q
    ||||||||||||||||||||||   |||||||||| ||||   |||||||||   ||||| | |||||||  |||||||| |||||||||||||||||||    
T  9273882 ctccaaatcgtgacacgttttcagtaatcgtgacatgattcc-ctttcttcagtttcttcaacttttctttcttttcttggtgcttaagcttgcttgtga 9273980  T
Q  124 actcaaaaatatcataaaaagac 146  Q
    |||| ||||||||||||||||||    
T  9273981 actccaaaatatcataaaaagac 9274003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 16164998 - 16164889
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 166  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||| |||| ||||| ||||  ||||||||||||  ||||||||    
T  16164998 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaattacactaaaaataacgaatgact 16164900  T
Q  167 gactgtcatca 177  Q
    |||||||||||    
T  16164899 gactgtcatca 16164889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 48644725 - 48644616
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 166  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||| |||| || || |||| |||||||||||||  ||||||||    
T  48644725 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacattatgaaaatgacactaaaaataaagaatgact 48644627  T
Q  167 gactgtcatca 177  Q
    |||||||||||    
T  48644626 gactgtcatca 48644616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 6602730 - 6602621
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 166  Q
    ||||||||||||||| |||||||| |  ||| |||| || |||||||||||||||||||  |||| || || || | |||||||||||||  ||||||||    
T  6602730 tttcttcaaaatcttgtatttttcatactttccttgttgtttaagcttgcttgtgaact-taaaacattatgaacatgacactaaaaataacgaatgact 6602632  T
Q  167 gactgtcatca 177  Q
    |||||||||||    
T  6602631 gactgtcatca 6602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 48645852 - 48645921
Alignment:
Q  108 ttaagcttgcttgtgaactcaaaaatatcataaaaa-gacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||  ||||| |||| |||||||||||||  |||||||||||||||||||    
T  48645852 ttaagcttgcttgtgaactcaaaac-atcatgaaaatgacactaaaaataaagaatgactgactgtcatca 48645921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 37167030 - 37167070
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  37167030 ataaaaagactctaaaaatagcgaatgactgactgtcatca 37167070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 11826392 - 11826430
Alignment:
Q  139 aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  11826392 aaaaagactctaaaaatagtgcatgactgactgtcatca 11826430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 126
Target Start/End: Original strand, 18563366 - 18563396
Alignment:
Q  96 ttttcttgctgcttaagcttgcttgtgaact 126  Q
    |||||||||||||||||||||||||||||||    
T  18563366 ttttcttgctgcttaagcttgcttgtgaact 18563396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 177
Target Start/End: Original strand, 13450736 - 13450765
Alignment:
Q  148 ctaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||||||||    
T  13450736 ctaaaaatagtgaatgactgactgtcatca 13450765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 6e-62; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 43490956 - 43490793
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43490956 tcatcctgtgctcctaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagc 43490857  T
Q  114 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtg-aatgactgactgtcatca 177  Q
    ||| ||||||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  43490856 ttgtttgtgaactcaaaaatatcataaaaagactctaaaaat-gtgaaatgacagactgtcatca 43490793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 42061649 - 42061486
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| ||||||    
T  42061649 tcatcatgtgcttcaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagc 42061550  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  42061549 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 42061486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 22937892 - 22938055
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| ||||||||||||||||| |||||||| |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22937892 tcatcttgtgctccaaatcgtgatacgttttcaacaaccgtggcacgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagc 22937991  T
Q  114 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||||||||||| |||||||    ||||||| |||||||||||    
T  22937992 ttgcttgtgaactcaaaaatatcataaaaagactctaaaaacgtggaatgacagactgtcatca 22938055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 22 - 177
Target Start/End: Complemental strand, 32837238 - 32837083
Alignment:
Q  22 tgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 121  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  32837238 tgctccaaatcgtgacacgttttcaacaatcatgacacgattttgctttcttcaaaatcttctatttttctttcttttcttgctgcttaagcttgcttgt 32837139  T
Q  122 gaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||| ||||||||   |||||||  ||||||||||    
T  32837138 gaactcaaaaatatcataaaaagactctaaaaatgtggaatgacatactgtcatca 32837083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 37214929 - 37214766
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| ||||||||||||||||||| |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37214929 tcatcctgtgctccaaatcgtgacatgttttcaacaattgtgatacgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagc 37214830  T
Q  114 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||||||||||| ||||||||   ||||||| |||||| ||||    
T  37214829 ttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgttatca 37214766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 28442018 - 28442181
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||| |||  |||||| |||| |    
T  28442018 tcatcctgtgctctaaatcgtgacacgttttcaacaatcgtgacacaattttgctttcttcaaaatcttatatttttcttgttttctttgctgtttaaac 28442117  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  28442118 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 28442181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 31863035 - 31862872
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||  ||| || ||||||    
T  31863035 tcatcatgtgctctaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaattttctatttttcttgctttctttgttgtttaagc 31862936  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| ||||||| || |||| |||||||||||||  |||||||||||||||||||    
T  31862935 ttgcttgtgaactc-aaaatattatgaaaatgacactaaaaataaggaatgactgactgtcatca 31862872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 14376706 - 14376834
Alignment:
Q  49 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagaca 147  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||| |||  ||| || |||| ||||||||||||||| |||||||||| |||| ||||    
T  14376706 aatcgtgacacgaatttgctttcctcaaaatcttctatttttcttgatttctttgttgtttaaacttgcttgtgaactc-aaaatatcatgaaaatgaca 14376804  T
Q  148 ctaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||||||||    
T  14376805 ctaaaaatagtgaatgactgactgtcatca 14376834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 28788309 - 28788401
Alignment:
Q  85 atttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  28788309 atttttcttgtttttcttgctgcttaagcttgcttgtgaactaaaaaatatcataaaaagactctaaaaatagcaaatgactgactgtcatca 28788401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 14016927 - 14017036
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 167  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  14016927 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 14017026  T
Q  168 actgtcatca 177  Q
    ||||||||||    
T  14017027 actgtcatca 14017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 21336650 - 21336742
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||    
T  21336650 tttttcttgcttttcttgttgcttaagcttgcttgtgaactcaaaaatataataaaaaagactctaaaaatagtgaatgactgactgtcatca 21336742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 21827949 - 21828041
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||    
T  21827949 tttttcttgcttttcttgctgcttaagcttgcttgcgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 21828041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 17747726 - 17747617
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 167  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||| ||| ||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  17747726 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagctttcttatgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 17747627  T
Q  168 actgtcatca 177  Q
    ||||||||||    
T  17747626 actgtcatca 17747617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 39191422 - 39191333
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcat 175  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||   ||||| ||||||||||    
T  39191422 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaagtatcataaaaagactctaaaaataacaaatgattgactgtcat 39191333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 40916795 - 40916889
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat---aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||| ||   |||||||| ||||||||||  ||||||||||||||||||    
T  40916795 tttttcttgcttttcttgttgcttaagcttgcttgtgaactcaaaaatatgataaaaaaaagactctaaaaatagcaaatgactgactgtcatca 40916889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 18031801 - 18031710
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||||||||||| ||||||| ||||||| |||||||||||||||||| |||||||||  ||||||| |||| ||||||    
T  18031801 tttttcttgcttttcttgctgcttaaacttgcttttgaactcgaaaatatcataaaaagactctaaaaatatggaatgacggactatcatca 18031710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 4100278 - 4100431
Alignment:
Q  23 gctccaaatcgtgacacgttttcgac-aatcgtgacacgat----tttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgc 117  Q
    ||||||||||||| |||||||| ||  ||||||||||||||    |||  ||||||||   |||||  |||| |||| |||||||||||||||| |||||    
T  4100278 gctccaaatcgtgtcacgtttttgagtaatcgtgacacgatccctttttttttcttcagtttcttcagttttccttgcttttcttgctgcttaatcttgc 4100377  T
Q  118 ttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgt 172  Q
     |||||||||||||||||||||||||||| || ||||||| |||| |||||||||    
T  4100378 ctgtgaactcaaaaatatcataaaaagactct-aaaatagcgaataactgactgt 4100431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 7270305 - 7270241
Alignment:
Q  113 cttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  7270305 cttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgacagactgtcatca 7270241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 2836761 - 2836702
Alignment:
Q  96 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaat 155  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  2836761 ttttcttgctgcttaagtttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 2836702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 30065643 - 30065562
Alignment:
Q  96 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||  |||||| ||| ||||||||    
T  30065643 ttttcttgttgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaataacgaatgaatgattgtcatca 30065562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 2837584 - 2837641
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa 143  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  2837584 tttttcttgcttttattgctgcttaagcttgcttgtgaactccaaaatatcataaaaa 2837641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 25329505 - 25329456
Alignment:
Q  128 aaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||||| || |||||||||| |||||||||||||||||||    
T  25329505 aaaaatatcataaaaaaactctaaaaatagcgaatgactgactgtcatca 25329456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 7624366 - 7624303
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 131  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||| |||||||||||||    
T  7624366 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcctgtgaactcaaaa 7624303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 41307405 - 41307445
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  41307405 ataaaaagactctaaaaatagcgaatgactgactgtcatca 41307445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 21336558 - 21336609
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgatttt 65  Q
    ||||| ||||||| ||||||||||| |||||| |||| ||||||||||||||    
T  21336558 tcatcctgtgctctaaatcgtgacatgttttcaacaaccgtgacacgatttt 21336609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 33551425 - 33551385
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaact 126  Q
    ||||||||| |||||||||||||||| ||| ||||||||||    
T  33551425 tttttcttgcttttcttgctgcttaaacttacttgtgaact 33551385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 1e-59; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 15431327 - 15431164
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||  |||||| |||| |    
T  15431327 tcatcctgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttctcttgttttctttgctgtttaaac 15431228  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  15431227 ttgcttgtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 15431164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 15437941 - 15437778
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||  |||||| |||| |    
T  15437941 tcatcctgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttctcttgttttctttgctgtttaaac 15437842  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  15437841 ttgcttgtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 15437778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 18910767 - 18910604
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||| || |||||     
T  18910767 tcatcatgtgctctaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagt 18910668  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  18910667 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 18910604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 33410805 - 33410962
Alignment:
Q  20 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 119  Q
    |||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||| || |||| |||||||    
T  33410805 tgtgcttcaaatcgtaacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaaacttgctt 33410904  T
Q  120 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  33410905 gtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 33410962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 25 - 177
Target Start/End: Original strand, 3798644 - 3798796
Alignment:
Q  25 tccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaa 124  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||  |||||| |||| ||||||||||||    
T  3798644 tccaaatcgtgacacattttcaacaatcgtgacaagattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttaaacttgcttgtgaa 3798743  T
Q  125 ctcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  3798744 ctc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 3798796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 5669778 - 5669628
Alignment:
Q  27 caaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaact 126  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||| || |||| ||||||||||||||    
T  5669778 caaattgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaaacttgcttgtgaact 5669679  T
Q  127 caaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    | |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  5669678 c-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 5669628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 5721808 - 5721971
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| ||||||    
T  5721808 tcatcctgtgcttcaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagc 5721907  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||| |||||||||   ||||||||| |||| ||||||||||| ||||||||||||| ||||||||    
T  5721908 ttgtttgtgaact-tgaaatatcatgaaaatgacactaaaaacagtgaatgactgattgtcatca 5721971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 19865480 - 19865643
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| ||||||||||||||||| || ||||| | |||||||||||||||||| ||||||||||||||||||||||||||| |||  ||| || ||||||    
T  19865480 tcatcctgtgctccaaatcgtgatacattttcaataatcgtgacacgattttgttttcttcaaaatcttctatttttcttgctttctttgttgtttaagc 19865579  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  19865580 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 19865643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 22 - 177
Target Start/End: Complemental strand, 5680624 - 5680469
Alignment:
Q  22 tgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 121  Q
    ||||| |||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| || |||||||||||| |    
T  5680624 tgctctaaattgtgacacgttttcaacaatcgtgacatgattttgcttttttcaaaatcttctatttttcttgcttttcttgttgtttaagcttgcttat 5680525  T
Q  122 gaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||| ||||||||   ||||||| | |||||||||    
T  5680524 gaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagtctgtcatca 5680469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 9717114 - 9716951
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| ||||||| |||| ||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||  ||| || |||| |    
T  9717114 tcatcctgtgctctaaattgtgccacgttttcaacaatcgtgacacgattttgctttcttcgaaatcttctatttttcttgttttctttgttgtttaaac 9717015  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  9717014 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgaccgactgtcatca 9716951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 14571144 - 14571026
Alignment:
Q  59 cgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagt 158  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||       
T  14571144 cgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtg 14571045  T
Q  159 gaatgactgactgtcatca 177  Q
    ||||||| ||| |||||||    
T  14571044 gaatgacagaccgtcatca 14571026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 176
Target Start/End: Original strand, 19861124 - 19861286
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||| ||||||  |||||||||||||| ||||||||||| |||  |||||| ||||||    
T  19861124 tcatcctgtgctccaaatcgtgatacgttttcaacaatcgtgacacaattttgtgttcttcaaaatcttatatttttcttgctttctttgctgtttaagc 19861223  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatc 176  Q
    |||||||||||||| |||||||||| |||| ||||||||||| |||||||||||| ||| ||||    
T  19861224 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgtctgccatc 19861286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 28 - 177
Target Start/End: Complemental strand, 12237503 - 12237354
Alignment:
Q  28 aaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactc 127  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||  ||| || ||||||||||||||||||||    
T  12237503 aaattgtgacacattttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttctcttgctttctttgttgtttaagcttgcttgtgaactc 12237404  T
Q  128 aaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
     |||||||||| |||| ||||||||||| ||||||||| ||||| ||||||    
T  12237403 -aaaatatcatgaaaatgacactaaaaacagtgaatgaatgactatcatca 12237354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 49269885 - 49269735
Alignment:
Q  27 caaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaact 126  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||  |||| | ||||||||| |||  ||||    
T  49269885 caaatcgtgacacgttttcaacaatcgtgatacgattttgctttcttcaaaatcttctatttttcttgctttctttgccgtttaagcttgtttgctaact 49269786  T
Q  127 caaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||| || ||||||||    ||||||||||||||||||    
T  49269785 caaaaatatcataaaaaaactctaaaaatgtaaaatgactgactgtcatca 49269735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 40617649 - 40617762
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| |||| || |||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  40617649 tcatcttgtgttctaaatcgtgacacgttttcaacaatcgtggcacgattttgccttcttcaaaatcttctatttttcttgcttttcttgctgcttaagc 40617748  T
Q  114 ttgcttgtgaactc 127  Q
    ||||||||||||||    
T  40617749 ttgcttgtgaactc 40617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 37104113 - 37104241
Alignment:
Q  49 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagaca 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| |||||||||||||||||||| |||||||||| |||| || |    
T  37104113 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagcttgcttgtgaactc-aaaatatcatgaaaatgata 37104211  T
Q  148 ctaaaaatagtgaatgactgactgtcatca 177  Q
    ||||| | ||||||||||||| ||||||||    
T  37104212 ctaaacacagtgaatgactgagtgtcatca 37104241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 21419070 - 21418987
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgac 169  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21419070 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagcgaatgactgac 21418987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 53093884 - 53093767
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| |||||||||| ||||||||||||||| ||||||||| ||||||||| ||||||||||||||||| | ||||| || ||| ||||||| ||||||    
T  53093884 tcatcctgtgctccaattcgtgacacgttttcaacaatcgtgtcacgattttactttcttcaaaatcttcaacttttcatgctttccttgctgtttaagc 53093785  T
Q  114 ttgcttgtgaactcaaaa 131  Q
    ||||||||||||||||||    
T  53093784 ttgcttgtgaactcaaaa 53093767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 3718427 - 3718336
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||    
T  3718427 tttttcttgcttttcttgttgcttaagcttgcttgtgaactcaaaaatatcataaaaatactctaaaaatagtgaatgagtgactgtcatca 3718336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 12782197 - 12782106
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  12782197 tttttcttgcttttcttgctgcttaagcttgcttgtaaactcaaaaatatcataaaatgactctaaaaatagcgaatgactgactgtcatca 12782106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 242 - 333
Target Start/End: Complemental strand, 18449231 - 18449140
Alignment:
Q  242 agtcgtgtgcttggatatctttacttaatgatgttagtgctattgagatgatgttgtagttctaagaatgatgtgataatttgttgatgatg 333  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  18449231 agtcgtgtgcttggatatctttacttgatgatgttagtgcacttgagatgatgttgtagttgtaagaatgatgtgatgatttgttgatgatg 18449140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 40794283 - 40794200
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgac 169  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  40794283 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgac 40794200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 29324088 - 29323979
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 167  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  29324088 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 29323989  T
Q  168 actgtcatca 177  Q
    ||||||||||    
T  29323988 actgtcatca 29323979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 44809795 - 44809904
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 167  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  44809795 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 44809894  T
Q  168 actgtcatca 177  Q
    ||||||||||    
T  44809895 actgtcatca 44809904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 44164090 - 44164001
Alignment:
Q  89 ttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcata-aaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  44164090 ttcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaaagactttaaaaatagtgaatgactgactgtcatca 44164001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 52007350 - 52007431
Alignment:
Q  96 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||    
T  52007350 ttttcttgctgcttaagcttgcttttgaactcaacaatatcataaaaagactctaaaaatagcgaatgactgactgtcatca 52007431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 15430674 - 15430766
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||  |||||||||||||||||||    
T  15430674 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaaagactctgaaaataacgaatgactgactgtcatca 15430766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 15437288 - 15437380
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||  |||||||||||||||||||    
T  15437288 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaaagactctgaaaataacgaatgactgactgtcatca 15437380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 27013321 - 27013229
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcata-aaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||| ||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  27013321 tttttcttgcttttcttgttgcttaagcttgcctgtgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 27013229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 53010377 - 53010458
Alignment:
Q  96 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  53010377 ttttcttgctgcttaatcttacttgtgaactcaaaaatatcataaaaagactctaaaaataatgaatgactgactatcatca 53010458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 27677874 - 27677966
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||| ||| |||||||||||||||| |||| ||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  27677874 ttttttttgcttttcttgctgcttaatcttgattgtgaactcaaaaatatcataaaaaagactctaaaaatagtgaataactgactgtcatca 27677966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 24044966 - 24045057
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||| |||| |||||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||||  |||||||||||||||||||    
T  24044966 ttttccttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcaaaaaaagactctaaaaataacgaatgactgactgtcatca 24045057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 34320738 - 34320839
Alignment:
Q  71 cttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgact 170  Q
    |||||||||||| |||||||| || ||| |||  || |||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||    
T  34320738 cttcaaaatcttgtatttttcatgctttccttattgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactgact 34320837  T
Q  171 gt 172  Q
    ||    
T  34320838 gt 34320839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 56198137 - 56198029
Alignment:
Q  69 ttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactg 167  Q
    ||||||||||||||||||||||| || ||| |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  |||||||||    
T  56198137 ttcttcaaaatcttctatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataacgaatgactg 56198039  T
Q  168 actgtcatca 177  Q
    ||||||||||    
T  56198038 actgtcatca 56198029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 19826793 - 19826701
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaa-tatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||| ||||||| ||| |||||||||||||||| | |||||||||||| |||||||||| |||||||||||||||||||    
T  19826793 tttttcttgcttttcttgttgcttaatcttacttgtgaactcaaaaaatttcataaaaagactctaaaaatagcgaatgactgactgtcatca 19826701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 27691933 - 27692025
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||||||| | |||||||| ||||||||||||||||||| | ||||||||    
T  27691933 tttttcttgcttttcttgctgcttaatcttgcttgtgaattcaaaaatatcgtaaaaaagactctaaaaatagtgaatgactaattgtcatca 27692025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 19820032 - 19819950
Alignment:
Q  96 ttttcttgctgcttaagcttgcttgtgaactcaaaaa-tatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| ||||| |||||||||||||||||||| ||||||||||||||  ||||||||| |||||||||||||||||||    
T  19820032 ttttcttgctacttaatcttgcttgtgaactcaaaaaatatcataaaaagactttaaaaatagcgaatgactgactgtcatca 19819950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 56194831 - 56194722
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 166  Q
    |||||||||||||||||||||||| || ||| |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  |||||| |    
T  56194831 tttcttcaaaatcttctatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataacgaatgatt 56194733  T
Q  167 gactgtcatca 177  Q
    |||||||||||    
T  56194732 gactgtcatca 56194722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 35509280 - 35509201
Alignment:
Q  96 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||| ||||||| ||||||||||||||||||||||||||| ||||  ||||||||||  |||||||||||||| ||||    
T  35509280 ttttcttgttgcttaatcttgcttgtgaactcaaaaatatcatataaag--actaaaaataacgaatgactgactgttatca 35509201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 47114885 - 47114776
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 166  Q
    ||||||||||||||| |||||||| || ||| |||  || |||||||||||||||||||| |||| || || |||| |||||||||||||  ||||||||    
T  47114885 tttcttcaaaatcttgtatttttcatgttttccttattgtttaagcttgcttgtgaactc-aaaacataatgaaaatgacactaaaaataaagaatgact 47114787  T
Q  167 gactgtcatca 177  Q
    |||||||||||    
T  47114786 gactgtcatca 47114776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 177
Target Start/End: Original strand, 15405793 - 15405898
Alignment:
Q  72 ttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgact 170  Q
    ||||||||||| |||||||| ||  || |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  ||||||||||||    
T  15405793 ttcaaaatcttgtatttttcatgcgttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataaagaatgactgact 15405891  T
Q  171 gtcatca 177  Q
     ||||||    
T  15405892 ttcatca 15405898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 33926230 - 33926121
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa-gacactaaaaatagtgaatgact 166  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||| |  |||||  ||| |||||||||| ||   |||||||    
T  33926230 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaagac-atcatgcaaatgacactaaaagtaacaaatgact 33926132  T
Q  167 gactgtcatca 177  Q
    |||||||||||    
T  33926131 gactgtcatca 33926121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 15812973 - 15813036
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 131  Q
    ||||||||||||||| |||||||| || ||| |||| || |||| |||||||||||||||||||    
T  15812973 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaaacttgcttgtgaactcaaaa 15813036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 37741471 - 37741512
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactc 127  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
T  37741471 tttttcttgtttttcttgctgtttaagcttgcttgtgaactc 37741512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 38284375 - 38284415
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  38284375 ataaaaagactctaaaaatagcgaatgactgactgtcatca 38284415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 177
Target Start/End: Complemental strand, 17669475 - 17669447
Alignment:
Q  149 taaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||||||||||||||||||    
T  17669475 taaaaatagtgaatgactgactgtcatca 17669447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 34018659 - 34018699
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  34018659 ataaaaagactctaaaaatagcgaatgacggactgtcatca 34018699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 48416408 - 48416448
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  48416408 ataaaaagactctaaaaatagcgaatgacggactgtcatca 48416448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 6e-59; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 45156755 - 45156918
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  45156755 tcatcctgtgctccaaatcgtgacacattttcaacaatcgtgacacgattgtgctttcttcaaaatcttctatttttcttgcttttcttgctgctaaagc 45156854  T
Q  114 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||||||||||| |||||||||  ||||||   ||||||||||    
T  45156855 ttgcttgtgaactcaaaaatatcataaaaagactctaaaaatatagaatgataaactgtcatca 45156918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 14421027 - 14420864
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| |||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||    
T  14421027 tcatcctgtgttccaaatcgtgacacgttttcaacaatcgtgatacgattttgctttcttcaaaatcttatatttttcttgcttttcttgttgcttaagc 14420928  T
Q  114 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||| ||||||||||||||||||| ||||||||   ||||||  |||||||||||    
T  14420927 ttgcttgtgaactaaaaaatatcataaaaagactctaaaaatgtggaatgagagactgtcatca 14420864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 5540832 - 5540995
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||  || |||||||||||| ||    
T  5540832 tcatcctgtgcttcaaatcgtgacacgttttcaacaatcgtgacatgattttgcttccttcaaaatcttctatttttcttacttgtcttgctgcttatgc 5540931  T
Q  114 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||||||||||| ||||||||   |||||||  ||||||||||    
T  5540932 ttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacaaactgtcatca 5540995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 10663174 - 10663011
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    |||| |||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| |||  |    
T  10663174 tcattatgtgctccaaatcatgacatgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttagac 10663075  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| || ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  10663074 ttgcttgtgaactc-aacatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 10663011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 18722152 - 18722310
Alignment:
Q  20 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttc-aaaatcttctatttttcttggttttcttgctgcttaagcttgct 118  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||  ||| || ||||||||||     
T  18722152 tgtgctccaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgca 18722251  T
Q  119 tgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  18722252 tgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 18722310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 33878089 - 33878238
Alignment:
Q  28 aaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactc 127  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| |||| ||| |||||||||||    
T  33878089 aaattgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaaactttcttgtgaactc 33878188  T
Q  128 aaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
     |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  33878189 -aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 33878238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 14 - 173
Target Start/End: Original strand, 25595521 - 25595681
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttc-aaaatcttctatttttcttggttttcttgctgcttaag 112  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||  ||| || |||||    
T  25595521 tcatcatgtgctccaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaag 25595620  T
Q  113 cttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtc 173  Q
    ||||| ||||||||| |||||||||| |||| ||||||||||| | ||||||||||||||||    
T  25595621 cttgcatgtgaactc-aaaatatcatgaaaatgacactaaaaacaatgaatgactgactgtc 25595681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 25228175 - 25228049
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||||||||||||||||||||||||||||||  |||||| |||||||||||  ||||||||||||||||||||||||||| |||||||||| ||| |||    
T  25228175 tcatcatgtgctccaaatcgtgacacgttttcagcaatcgagacacgatttt--tttcttcaaaatcttctatttttcttgtttttcttgcttcttgagc 25228078  T
Q  114 ttgcttgtgaactcaaaaatatcataaaa 142  Q
    |||||||||||||||||||||||||||||    
T  25228077 ttgcttgtgaactcaaaaatatcataaaa 25228049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 14 - 173
Target Start/End: Original strand, 25592336 - 25592496
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttc-aaaatcttctatttttcttggttttcttgctgcttaag 112  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||  ||| || |||||    
T  25592336 tcatcatgtgctccaaatcgggacacattttcaacaatcgtgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaag 25592435  T
Q  113 cttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtc 173  Q
    ||||| ||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||    
T  25592436 cttgcatgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtc 25592496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 43682634 - 43682798
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| |||| ||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| |||| |    
T  43682634 tcatcctgtgttccaaattgtgacacgttttcaataatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttaaac 43682733  T
Q  114 ttgcttgtgaactcaaaaatatcat--aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||| ||||||| ||||||||||  |||| || ||||||||||||||||||||||||| |||||    
T  43682734 ttgcttatgaactc-aaaatatcatgaaaaatgatactaaaaatagtgaatgactgactgccatca 43682798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 18826725 - 18826834
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 167  Q
    ||||||||||||||| |||||||| || ||| |||| || ||||| |||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  18826725 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagtttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 18826824  T
Q  168 actgtcatca 177  Q
    ||||||||||    
T  18826825 actgtcatca 18826834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 177
Target Start/End: Complemental strand, 12582372 - 12582218
Alignment:
Q  23 gctccaaatcgtgacacgtttt-cgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 121  Q
    |||||||||||||||||||||| | | ||||||||||||||    |||| ||||   |||||  ||||||||| ||||||| |||||||| |||||||||    
T  12582372 gctccaaatcgtgacacgtttttcaataatcgtgacacgatccc-cttttttcagtttcttcagtttttcttgcttttctttctgcttaatcttgcttgt 12582274  T
Q  122 gaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||| |||||||||| |||||| ||| | ||||||    
T  12582273 gaactcaaaaatatcataaaaagactctaaaaatagcgaatgattgattttcatca 12582218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 22174782 - 22174891
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 166  Q
    ||||||||||||||| |||||||| || ||| |||| || ||||||||||||||||||||||||| ||||| |||| |||||| |||||| |||||| ||    
T  22174782 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaaacatcatgaaaatgacact-aaaataatgaatggct 22174880  T
Q  167 gactgtcatca 177  Q
    |||||||||||    
T  22174881 gactgtcatca 22174891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 30640598 - 30640505
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcata--aaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| |||||||  ||||||  || |||||||||||||| ||||||||||||    
T  30640598 tttttcttgcatttcttgctgcttaagcttgcttgtgaactcaaaagtatcataaaaaaagattcttaaaatagtgaatgattgactgtcatca 30640505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 242 - 333
Target Start/End: Original strand, 15662654 - 15662745
Alignment:
Q  242 agtcgtgtgcttggatatctttacttaatgatgttagtgctattgagatgatgttgtagttctaagaatgatgtgataatttgttgatgatg 333  Q
    |||||||||||||||||| ||||||| |||||| ||||||  || |||| ||||||||||| ||||||||||||||| |||| |||||||||    
T  15662654 agtcgtgtgcttggatatatttacttgatgatgctagtgcactttagataatgttgtagttgtaagaatgatgtgatgatttattgatgatg 15662745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 14589707 - 14589816
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 166  Q
    ||||||||||||||| |||||||| || ||| |||| ||  ||||||||||||||||||| |||| ||||| |||| ||||||||||||| |||||||||    
T  14589707 tttcttcaaaatcttgtatttttcatgctttccttgttgtgtaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataatgaatgact 14589805  T
Q  167 gactgtcatca 177  Q
     ||| ||||||    
T  14589806 aactatcatca 14589816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 19793019 - 19792926
Alignment:
Q  86 tttttcttggttttcttgctgcttaagctt-gcttgtgaactcaaaaatatcata-aaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||| | |||||||| || |||| ||| |||||||||||||||||||||||| ||||||| |||||||||||||||| | |||||||||||    
T  19793019 tttttctagcttttcttgttgtttaatctttgcttgtgaactcaaaaatatcataaaaaagactctaaaaatagtgaatggccgactgtcatca 19792926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 23612645 - 23612569
Alignment:
Q  101 ttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa-gacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||| |||| ||||||||||||||||||| | |||| |||| ||||||||||||||||||||||||||||||||||    
T  23612645 ttgctgtttaaacttgcttgtgaactcaaaa-tctcatcaaaatgacactaaaaatagtgaatgactgactgtcatca 23612569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 5981150 - 5981220
Alignment:
Q  107 cttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtg-aatgactgactgtcatca 177  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  5981150 cttaaacttgcttgtgaactcaaaaatatcataaaaagactctaaaaat-gtgaaatgacggactgtcatca 5981220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 38249248 - 38249312
Alignment:
Q  67 ctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 131  Q
    ||||||||||||||||  | ||||| || ||| ||||||| ||||||||||||||||| ||||||    
T  38249248 ctttcttcaaaatctttaacttttcatgttttccttgctgtttaagcttgcttgtgaattcaaaa 38249312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 20261686 - 20261647
Alignment:
Q  138 taaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  20261686 taaaaagactctaaaaatagtgtatgactgactgtcatca 20261647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 21048316 - 21048277
Alignment:
Q  138 taaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  21048316 taaaaagactctaaaaatagtgtatgactgactgtcatca 21048277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 16953038 - 16952998
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  16953038 ataaaaagactctaaaaatagcgaatgacggactgtcatca 16952998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 30640672 - 30640624
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgat 62  Q
    ||||| |||| ||||||  ||||||||||||| ||||||||||||||||    
T  30640672 tcatcttgtgatccaaagtgtgacacgttttcaacaatcgtgacacgat 30640624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 3e-54; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 29644145 - 29644308
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||| |||| ||||||||||||     
T  29644145 tcatcctgtgctccaaatcgtgatacgttttcaacaatcgtgacacgattttactttcttcaaagtcttctatttttcttgctttttttgctgcttaagt 29644244  T
Q  114 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   ||||||| |||||||||||    
T  29644245 ttgcttgtgaactcaaaaatatcataaaaagactctataaatgtggaatgacagactgtcatca 29644308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 2793462 - 2793299
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||  || ||| |||| |    
T  2793462 tcatcctgtgcttcaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcgaaatcttctatttttcttgttttctttactgtttaaac 2793363  T
Q  114 ttgcttgtgaactcaaaaatatca-taaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  2793362 ttgcttgtgaactc-aaaatatcattaaaaagactctaaaaatagtgaacgactgactgtcatca 2793299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 49499405 - 49499568
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||  ||| || ||||||    
T  49499405 tcatcatatgctccaaatcgtgacacgttttcaacaatcgtgacatgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaagc 49499504  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||| ||||||||| |||||||||| ||||  |||||||||| || |||||||||||||||||||    
T  49499505 ttgcatgtgaactc-aaaatatcatgaaaataacactaaaaacagcgaatgactgactgtcatca 49499568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 22 - 177
Target Start/End: Original strand, 1951190 - 1951345
Alignment:
Q  22 tgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgt 121  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||  |||||| |||| |||||||||    
T  1951190 tgctccaaatcgtgacacgttttcaacaatcgtgacacgattttgctttctttgaaatcttctatttttcttgttttctttgctgtttaaacttgcttgt 1951289  T
Q  122 gaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||| || ||||||| |||| || ||| |||||||||||||||||||||||||||    
T  1951290 gaactc-aagatatcatgaaaatgatacttaaaatagtgaatgactgactgtcatca 1951345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 79 - 177
Target Start/End: Original strand, 41059135 - 41059234
Alignment:
Q  79 tcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||    
T  41059135 tcttcgatttttcttgcttttcttgctgcttaagcttgcttgcgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 41059234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 2404809 - 2404722
Alignment:
Q  90 tcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||    
T  2404809 tcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatattataaaaagactctaaaaatagcgaatgactgactgtcatca 2404722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 45961598 - 45961707
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 167  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||| ||||| ||||||||||  ||||||||    
T  45961598 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataacaagactctaaaaatagcaaatgactg 45961697  T
Q  168 actgtcatca 177  Q
    ||||||||||    
T  45961698 actgtcatca 45961707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 68 - 176
Target Start/End: Original strand, 27537104 - 27537212
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 167  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| ||||||||||||||  |||||||||  ||||||||    
T  27537104 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactataaaaatagcaaatgactg 27537203  T
Q  168 actgtcatc 176  Q
    |||||||||    
T  27537204 actgtcatc 27537212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 34733100 - 34733217
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| ||||||||||||| ||||| |||||| ||||||||| ||||||||| ||||||||||||||||| | ||||| || ||| ||| ||| |||| |    
T  34733100 tcatcctgtgctccaaatcctgacatgttttcaacaatcgtgtcacgattttactttcttcaaaatcttcaacttttcatgatttccttactgtttaatc 34733199  T
Q  114 ttgcttgtgaactcaaaa 131  Q
    ||||||||||||||||||    
T  34733200 ttgcttgtgaactcaaaa 34733217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 21019287 - 21019367
Alignment:
Q  96 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  21019287 ttttcttgctgcttaagcttggttgcgaactcaaaaatatcat-aaaagactctaaaaatagcgaatgactgactgtcatca 21019367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 42021812 - 42021721
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||  ||||| |||||||||| |||||||||| |||||| ||||||||||||    
T  42021812 tttttcttgcttttattgctgcttaaacttgcttgtgaactcagtaatattataaaaagactctaaaaatagcgaatgattgactgtcatca 42021721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 21108302 - 21108393
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| ||||||||| |||||| ||||||| |||  ||||||||||||||| ||||| ||||||| || |||||||||||||||||||    
T  21108302 tttttcttgcttttcttgcagcttaatcttgcttttgagttcaaaaatatcataagaagactctaaaaagagcgaatgactgactgtcatca 21108393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 31204123 - 31204014
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 166  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||| |||| || || |||| |||||||||||||  ||||||||    
T  31204123 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacataatgaaaatgacactaaaaataaagaatgact 31204025  T
Q  167 gactgtcatca 177  Q
    |||| ||||||    
T  31204024 gactatcatca 31204014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 6071791 - 6071854
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaa 131  Q
    ||||||||||||||| |||||||| || |||||||| || ||||||||||||||||||||||||    
T  6071791 tttcttcaaaatcttgtatttttcatgtttttcttgttgtttaagcttgcttgtgaactcaaaa 6071854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 47708778 - 47708817
Alignment:
Q  138 taaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  47708778 taaaaagactctaaaaatagtgaatgactgactgtcatca 47708817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 22460406 - 22460443
Alignment:
Q  140 aaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  22460406 aaaagactctaaaaatagtgaatgactgactgtcatca 22460443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 45940661 - 45940621
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  45940661 ataaaaagactctaaaaatagcgaatgactgactgtcatca 45940621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 3088696 - 3088735
Alignment:
Q  138 taaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  3088696 taaaaagactctaaaaatagtgcatgactgactgtcatca 3088735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 177
Target Start/End: Original strand, 22454290 - 22454319
Alignment:
Q  148 ctaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||||||||    
T  22454290 ctaaaaatagtgaatgactgactgtcatca 22454319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 49147150 - 49147113
Alignment:
Q  140 aaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  49147150 aaaagactctaaaaatagtgaatgattgactgtcatca 49147113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 28110323 - 28110283
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  28110323 ataaaaagactctaaaaatagcgaatgacggactgtcatca 28110283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 37184743 - 37184783
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  37184743 ataaaaagactctaaaaatagcgaatgacggactgtcatca 37184783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 2e-52; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 25869998 - 25869835
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||  ||| || |||| |    
T  25869998 tcatcctgtgctccaaatcgtgacacgttttcgacaatcgtgacacgatttttctttcttcaaaatcttctatttctcttgttttctttgttgtttaaac 25869899  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    || ||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  25869898 tttcttgtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 25869835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 25873366 - 25873203
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||  ||| || |||| |    
T  25873366 tcatcctgtgctccaaatcatgacacgttttcgacaatcgtgacacgatttttctttcttcaaaatcttctatttctcttgttttctttgttgtttaaac 25873267  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  25873266 ttgcttgtgaactc-aaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 25873203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 26358835 - 26358672
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||  ||  |||||| |||| |    
T  26358835 tcatcctgtgctccaaatcgtgccacgttttcaacaatcgtgacacgattttgctttcttcgaaatcttctatttttcttgtcttctttgctgtttaaac 26358736  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    || ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  26358735 ttccttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 26358672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 36809272 - 36809435
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||| |||  ||| || |||| |    
T  36809272 tcatcctgtgctccaaatcgtgacacgttttcaacaatcgtgacacaaatttgctttcctcaaaatcttctatttttcttgttttctttgttgtttaaac 36809371  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  36809372 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 36809435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 38006123 - 38006286
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||  ||| || ||||||    
T  38006123 tcatcctgtgctccaaatcgtgacacgttttcgacaatcgtcacacgattttgctttcttcaaaatcttctatttctcttgctttctttgttgtttaagc 38006222  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||| |||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||| ||||    
T  38006223 ttgtttgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtaatca 38006286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 25139877 - 25140040
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |||  |||| | ||||||    
T  25139877 tcatcttgtgctccaaatcgtgacacgttgtcaacaatcgtgacacgattttgctttcttcgaaatcttctatttttcttgctttctttgccgtttaagc 25139976  T
Q  114 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    || ||||||||||||||||||||||||||| || |||||| |   |||||||||||||||||||    
T  25139977 ttacttgtgaactcaaaaatatcataaaaaaactctaaaattgtggaatgactgactgtcatca 25140040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 23 - 177
Target Start/End: Complemental strand, 16788542 - 16788389
Alignment:
Q  23 gctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtg 122  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||| ||||||||||| |||||||| ||||||||||||||||||    
T  16788542 gctctaaatcgtgacacgttttcaacaatcgtgacacgattgtgctttcatcaaaatcttatatttttcttgcttttcttgttgcttaagcttgcttgtg 16788443  T
Q  123 aactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||| ||||||  ||||||||||  ||||||||||||||||||    
T  16788442 aactcaaaattatcat-aaaagattctaaaaatagcaaatgactgactgtcatca 16788389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 25821754 - 25821922
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttc-aaaatcttctatttttcttggttttcttgctgcttaag 112  Q
    ||||| |||| ||||||||||||||| ||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| |||  ||| || |||||    
T  25821754 tcatcctgtgttccaaatcgtgacaccttttcaacaatcttgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaag 25821853  T
Q  113 cttgcttgtgaactcaaaa---atatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||||||||   ||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  25821854 cttgcttgtgaactcaaaatatatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 25821922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 23 - 177
Target Start/End: Original strand, 30275537 - 30275691
Alignment:
Q  23 gctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtg 122  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||| |||  ||| || |||| |||| |||||    
T  30275537 gctccaaatcgtgacacgttttcaacaatcgtgacacgaatttgctttcctcaaaatcttctatttttcttgttttctttgttgtttaaacttgtttgtg 30275636  T
Q  123 aactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    || || |||||||||| |||| ||||||||||||| ||||||||||||| ||||||    
T  30275637 aattc-aaaatatcatgaaaatgacactaaaaatattgaatgactgactatcatca 30275691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 15466298 - 15466170
Alignment:
Q  49 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagaca 147  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||  ||| || |||||||||||||||||||| |||||||||| |||| ||||    
T  15466298 aatcgtgacacgattttgctttcttcaaaatcttctatttctcttgatttctttgttgtttaagcttgcttgtgaactc-aaaatatcatgaaaatgaca 15466200  T
Q  148 ctaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||| ||||||||    
T  15466199 ctaaaaatagtgaatgactgattgtcatca 15466170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 10600042 - 10599951
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  10600042 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagattctaaaaatagtgaatgactgactgtcatca 10599951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 38014745 - 38014636
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 167  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  38014745 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactg 38014646  T
Q  168 actgtcatca 177  Q
    ||||||||||    
T  38014645 actgtcatca 38014636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 3874573 - 3874482
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  3874573 tttttcttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcctaaaaagactctaaaaataatgaatgactgactgtcatca 3874482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 31430529 - 31430638
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactg 167  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||     
T  31430529 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgacta 31430628  T
Q  168 actgtcatca 177  Q
    ||||||||||    
T  31430629 actgtcatca 31430638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 177
Target Start/End: Complemental strand, 5665905 - 5665830
Alignment:
Q  102 tgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||    
T  5665905 tgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgattgactgtcatca 5665830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 43722985 - 43722904
Alignment:
Q  96 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||| ||||||||||||    
T  43722985 ttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgattgactgtcatca 43722904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 13972725 - 13972813
Alignment:
Q  89 ttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||  |||||| ||||||||||||    
T  13972725 ttcttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgattgactgtcatca 13972813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 5105032 - 5104953
Alignment:
Q  96 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||  ||||||||||||||||||||||    
T  5105032 ttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaaaactctaaaa--agtgaatgactgactgtcatca 5104953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 13136853 - 13136764
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcat 175  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| ||| |||||||||   ||||||||||||||||    
T  13136853 tttttcttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcataaaatgactctaaaaataacaaatgactgactgtcat 13136764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 29439723 - 29439597
Alignment:
Q  49 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagaca 147  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||| |||  |||||| |||| |||||||||||||||   || ||||| |||| ||||    
T  29439723 aatcgtgacacgattttgctttcttcgaaatcttctttttttcttgttttctttgctgtttaaacttgcttgtgaactc---aacatcatgaaaatgaca 29439627  T
Q  148 ctaaaaatagtgaatgactgactgtcatca 177  Q
    |||||| ||  ||||||| |||||||||||    
T  29439626 ctaaaattaacgaatgacggactgtcatca 29439597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 36985626 - 36985732
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 166  Q
    |||||||||||||||||||||||  || ||| |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  ||||||||    
T  36985626 tttcttcaaaatcttctattttttctgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataacgaatgact 36985724  T
Q  167 gactgtca 174  Q
    ||||||||    
T  36985725 gactgtca 36985732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 6826055 - 6825974
Alignment:
Q  96 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||  |||| |||  |||||| ||||||||||||    
T  6826055 ttttcttgatgcttaatcttgcttgtgaactcaaaaatatcataaaaagactttaaatataacgaatgattgactgtcatca 6825974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 45453160 - 45453051
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 166  Q
    ||||||||||||||| |||||||| || ||| |||| || |||||||||||||||||||| |||| ||||| |||| ||| |||||||||  ||||||||    
T  45453160 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgaccctaaaaataaagaatgact 45453062  T
Q  167 gactgtcatca 177  Q
    || ||||||||    
T  45453061 gattgtcatca 45453051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 142
Target Start/End: Original strand, 31428340 - 31428414
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaa 142  Q
    ||||||||||||||| |||||||| || ||| |||| || |||| ||||||||||||||||||| ||||||||||    
T  31428340 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaaacttgcttgtgaactcaaaattatcataaaa 31428414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 45456409 - 45456300
Alignment:
Q  68 tttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 166  Q
    ||||||||||||||| |||||||| || |||  ||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  ||||| ||    
T  45456409 tttcttcaaaatcttgtatttttcatgctttctttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataaagaatggct 45456311  T
Q  167 gactgtcatca 177  Q
    || ||||||||    
T  45456310 gattgtcatca 45456300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 9189532 - 9189572
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  9189532 ataaaaagactctaaaaatagcgaatgactgactgtcatca 9189572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 37280556 - 37280596
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  37280556 ataaaaagactctaaaaatagcgaatgactgactgtcatca 37280596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 43208769 - 43208809
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  43208769 ataaaaagactctaaaaatagcgaatgactgactgtcatca 43208809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 31586785 - 31586823
Alignment:
Q  139 aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  31586785 aaaaagactctaaaaatagcgaatgactgactgtcatca 31586823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 177
Target Start/End: Original strand, 1504290 - 1504318
Alignment:
Q  149 taaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||||||||||||||||||    
T  1504290 taaaaatagtgaatgactgactgtcatca 1504318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 177
Target Start/End: Original strand, 1507492 - 1507520
Alignment:
Q  149 taaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||||||||||||||||||    
T  1507492 taaaaatagtgaatgactgactgtcatca 1507520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 8887882 - 8887842
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  8887882 ataaaaagactctaaaaatagcgaatgacggactgtcatca 8887842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 25957323 - 25957363
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  25957323 ataaaaagactctaaaaatagcgaatgacggactgtcatca 25957363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 40780698 - 40780658
Alignment:
Q  137 ataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||| |||||||||| |||||| ||||||||||||    
T  40780698 ataaaaagactctaaaaatagcgaatgattgactgtcatca 40780658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 61760 - 61597
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||  ||| || ||||||    
T  61760 tcatcttgtgtttcaaatcgtgacacgttttcgacaatcgtgacacgattttgctttctttaaaatcttctatttctcttgatttctttgttgtttaagc 61661  T
Q  114 ttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  61660 ttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 61597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 246232 - 246350
Alignment:
Q  59 cgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagt 158  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||       
T  246232 cgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtg 246331  T
Q  159 gaatgactgactgtcatca 177  Q
    ||||||| ||| |||||||    
T  246332 gaatgacagaccgtcatca 246350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 291120 - 290974
Alignment:
Q  20 tgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgctt 119  Q
    |||||||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||| |||  ||| || |||| |||||||    
T  291120 tgtgctccaaatcgtgacacgttttcaacaatcgtgacacaaatttgctttcctcaaaatcttctatttttcttgttttctttgttgtttaaacttgctt 291021  T
Q  120 gtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgact 166  Q
    |||||||  |||||||||| |||| |||||||||||||||||||||||    
T  291020 gtgaact-taaaatatcatgaaaatgacactaaaaatagtgaatgact 290974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 61 - 177
Target Start/End: Complemental strand, 197358 - 197242
Alignment:
Q  61 attttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtga 160  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||   ||    
T  197358 attttactttcttcaaaatcttctatttttcttgcttttcttgctgcttatgcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtgga 197259  T
Q  161 atgactgactgtcatca 177  Q
    ||||| |||||||||||    
T  197258 atgacagactgtcatca 197242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 4654 - 4563
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4654 tttttcttgattttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 4563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 26408 - 26277
Alignment:
Q  14 tcatcatgtgctccaaatcgtgacacgttttcgacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagc 113  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||         |||| ||||||||| |     
T  26408 tcatcctgtgcttcaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatt---------tttcatgctgcttatgt 26318  T
Q  114 ttgcttgtgaactcaaaaatatcataaaaagacactaaaaa 154  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  26317 ttgcttgtgaactcaaaaatatcataaaaagactctaaaaa 26277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 969 - 1060
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||| |||||||||||||||||||    
T  969 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaatactctaaaagtagcgaatgactgactgtcatca 1060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 4329 - 4420
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||    
T  4329 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaagtagcgaatgactgactgacatca 4420  T

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Target: scaffold0270; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 11459 - 11550
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||    
T  11459 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaagtagcgaatgactgactgacatca 11550  T

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Target: scaffold0334 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 53 - 177
Target Start/End: Complemental strand, 18588 - 18463
Alignment:
Q  53 gtgacacgattttgctttcttcaaaa-tcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacacta 150  Q
    |||||||| ||||||||||||||||| |||||||||||||||| |||  ||| || |||||||||| ||||||||| |||||||||| |||| |||||||    
T  18588 gtgacacgtttttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgcatgtgaactc-aaaatatcatgaaaatgacacta 18490  T
Q  151 aaaatagtgaatgactgactgtcatca 177  Q
    |||| ||||||||||||||||||||||    
T  18489 aaaacagtgaatgactgactgtcatca 18463  T

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Target: scaffold0381 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 6462 - 6554
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||    
T  6462 tttttcttgcttttcttgttgcttaagcttgcctgtgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 6554  T

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Target: scaffold0520 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 4790 - 4880
Alignment:
Q  87 ttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    |||||||  |||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  4790 ttttctttctttttttgctgcttaatcttgtttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgactgactgtcatca 4880  T

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Target: scaffold0045 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 71 - 177
Target Start/End: Complemental strand, 89071 - 88965
Alignment:
Q  71 cttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgac 169  Q
    ||||||||||||||||||||| || ||| |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  |||||||||||    
T  89071 cttcaaaatcttctatttttcatgctttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataacgaatgactgac 88973  T
Q  170 tgtcatca 177  Q
    ||||||||    
T  88972 tgtcatca 88965  T

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Target: scaffold1993 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1993
Description:

Target: scaffold1993; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 1136 - 1045
Alignment:
Q  86 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagtg-aatgactgactgtcatca 177  Q
    ||||||||| |||||||| ||||||||||| ||| ||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  1136 tttttcttgcttttcttggtgcttaagcttccttatgaactccaaaatatcataaaaagactctaaaaat-gtgaaatgactgactgtcatca 1045  T

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Target: scaffold1684 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 177
Target Start/End: Original strand, 369 - 474
Alignment:
Q  72 ttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagtgaatgactgact 170  Q
    ||||||||||| |||||||| ||  || |||| || |||||||||||||||||||| |||| ||||| |||| |||||||||||||  ||||||||||||    
T  369 ttcaaaatcttgtatttttcatgcgttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataaagaatgactgact 467  T
Q  171 gtcatca 177  Q
     ||||||    
T  468 ttcatca 474  T

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Target: scaffold0567 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 7016 - 7055
Alignment:
Q  138 taaaaagacactaaaaatagtgaatgactgactgtcatca 177  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  7016 taaaaagactctaaaaatagtgaatgactgactgtcatca 7055  T

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