View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16815_high_17 (Length: 516)

Name: NF16815_high_17
Description: NF16815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16815_high_17
NF16815_high_17
[»] chr6 (87 HSPs)
chr6 (153-357)||(14737085-14737289)
chr6 (13-153)||(22010477-22010617)
chr6 (13-156)||(11857139-11857282)
chr6 (15-154)||(14737356-14737495)
chr6 (196-357)||(5266492-5266653)
chr6 (153-314)||(22010251-22010412)
chr6 (157-314)||(14741988-14742145)
chr6 (15-148)||(14742222-14742355)
chr6 (160-357)||(11857351-11857567)
chr6 (153-350)||(28155097-28155294)
chr6 (209-314)||(30125080-30125185)
chr6 (153-281)||(16839107-16839235)
chr6 (28-144)||(5674516-5674633)
chr6 (153-281)||(6005783-6005911)
chr6 (153-281)||(33330028-33330156)
chr6 (153-281)||(33335525-33335653)
chr6 (153-267)||(6438860-6438974)
chr6 (153-268)||(5343841-5343956)
chr6 (300-357)||(14741926-14741983)
chr6 (196-357)||(16652716-16652877)
chr6 (300-357)||(22010189-22010246)
chr6 (300-357)||(30125018-30125075)
chr6 (15-98)||(28184671-28184757)
chr6 (212-314)||(2171939-2172041)
chr6 (15-125)||(28155379-28155489)
chr6 (196-293)||(5674313-5674410)
chr6 (196-268)||(6136367-6136439)
chr6 (196-314)||(16578921-16579039)
chr6 (196-314)||(16616341-16616459)
chr6 (300-357)||(6439026-6439083)
chr6 (300-357)||(16579044-16579101)
chr6 (300-357)||(16616279-16616336)
chr6 (212-281)||(22709480-22709549)
chr6 (209-314)||(27647530-27647635)
chr6 (298-350)||(5016976-5017028)
chr6 (306-357)||(5674229-5674281)
chr6 (209-269)||(6026941-6027001)
chr6 (298-350)||(31085953-31086005)
chr6 (15-125)||(6438666-6438776)
chr6 (303-349)||(22709590-22709636)
chr6 (196-269)||(33342507-33342581)
chr6 (300-357)||(6136490-6136547)
chr6 (300-357)||(16554454-16554511)
chr6 (300-357)||(16631010-16631067)
chr6 (300-357)||(25420797-25420854)
chr6 (300-360)||(5344007-5344067)
chr6 (301-345)||(27647480-27647524)
chr6 (15-79)||(16838911-16838977)
chr6 (15-79)||(33330297-33330363)
chr6 (15-79)||(33335794-33335860)
chr6 (212-293)||(411769-411851)
chr6 (196-269)||(13150956-13151030)
chr6 (196-314)||(16554516-16554634)
chr6 (196-314)||(16631072-16631190)
chr6 (303-345)||(26253602-26253644)
chr6 (300-358)||(33342631-33342689)
chr6 (196-269)||(34164551-34164625)
chr6 (196-269)||(34166773-34166847)
chr6 (298-350)||(24714936-24714989)
chr6 (196-269)||(25420904-25420977)
chr6 (300-345)||(34166678-34166723)
chr6 (301-357)||(6026834-6026890)
chr6 (298-350)||(18234648-18234700)
chr6 (303-345)||(411698-411740)
chr6 (311-349)||(2172057-2172095)
chr6 (212-314)||(3073178-3073280)
chr6 (303-345)||(3073288-3073330)
chr6 (300-350)||(16839273-16839323)
chr6 (300-350)||(33329940-33329990)
chr6 (300-345)||(13150861-13150906)
chr6 (30-118)||(22709241-22709327)
chr6 (300-345)||(23896899-23896944)
chr6 (310-350)||(33335437-33335477)
chr6 (301-345)||(34151840-34151884)
chr6 (301-345)||(34164456-34164500)
chr6 (298-329)||(603770-603801)
chr6 (28-90)||(5017304-5017364)
chr6 (298-345)||(5571761-5571808)
chr6 (15-79)||(6005584-6005650)
chr6 (305-352)||(21272467-21272514)
chr6 (28-118)||(31936804-31936892)
chr6 (300-350)||(6005949-6005999)
chr6 (303-345)||(6097931-6097973)
chr6 (15-125)||(5343644-5343756)
chr6 (212-269)||(5757059-5757116)
chr6 (212-269)||(23896792-23896849)
chr6 (298-350)||(10076672-10076724)
[»] scaffold0665 (1 HSPs)
scaffold0665 (177-357)||(8093-8273)
[»] chr8 (68 HSPs)
chr8 (160-357)||(10688618-10688815)
chr8 (153-357)||(25327664-25327887)
chr8 (13-146)||(7289713-7289846)
chr8 (153-358)||(10683738-10683962)
chr8 (160-314)||(6311719-6311873)
chr8 (160-358)||(18852626-18852844)
chr8 (28-145)||(6311532-6311649)
chr8 (160-314)||(18870083-18870238)
chr8 (153-314)||(7289489-7289651)
chr8 (196-357)||(30656102-30656282)
chr8 (196-360)||(36979834-36980017)
chr8 (28-144)||(30655880-30655996)
chr8 (196-314)||(33037349-33037467)
chr8 (196-314)||(4759596-4759714)
chr8 (28-144)||(18852913-18853030)
chr8 (28-144)||(18870307-18870424)
chr8 (16-125)||(25327961-25328070)
chr8 (16-125)||(25328087-25328196)
chr8 (196-357)||(25689561-25689721)
chr8 (28-146)||(10688884-10689003)
chr8 (28-144)||(33037554-33037671)
chr8 (153-281)||(39784420-39784548)
chr8 (153-268)||(35745755-35745870)
chr8 (28-144)||(4759820-4759938)
chr8 (28-144)||(1261703-1261820)
chr8 (28-143)||(36979611-36979726)
chr8 (196-314)||(1261477-1261595)
chr8 (300-357)||(4759534-4759591)
chr8 (300-357)||(18870021-18870078)
chr8 (300-357)||(33037287-33037344)
chr8 (300-358)||(39784324-39784382)
chr8 (298-350)||(5701959-5702011)
chr8 (196-314)||(3439150-3439267)
chr8 (15-125)||(39784632-39784742)
chr8 (301-357)||(3439088-3439144)
chr8 (298-349)||(4456573-4456624)
chr8 (312-359)||(6311890-6311937)
chr8 (313-360)||(7289424-7289471)
chr8 (303-349)||(2627327-2627373)
chr8 (212-314)||(2627381-2627483)
chr8 (300-361)||(7412894-7412956)
chr8 (303-345)||(26288462-26288504)
chr8 (303-345)||(26301719-26301761)
chr8 (303-345)||(26313713-26313755)
chr8 (300-357)||(15290143-15290200)
chr8 (300-357)||(15470512-15470569)
chr8 (28-132)||(26288121-26288226)
chr8 (212-293)||(26288352-26288433)
chr8 (28-132)||(26301378-26301483)
chr8 (212-293)||(26301609-26301690)
chr8 (28-132)||(26313372-26313477)
chr8 (212-293)||(26313603-26313684)
chr8 (300-357)||(42575852-42575909)
chr8 (28-88)||(31071035-31071095)
chr8 (191-269)||(42575723-42575802)
chr8 (196-269)||(15290250-15290324)
chr8 (196-269)||(15470619-15470693)
chr8 (303-345)||(31042921-31042963)
chr8 (298-350)||(23799099-23799151)
chr8 (28-90)||(7412569-7412629)
chr8 (300-350)||(35745921-35745971)
chr8 (300-349)||(19175233-19175282)
chr8 (28-90)||(4696416-4696476)
chr8 (15-79)||(10684116-10684182)
chr8 (15-79)||(35745558-35745624)
chr8 (232-269)||(7289629-7289666)
chr8 (212-293)||(7412787-7412868)
chr8 (31-90)||(23799384-23799441)
[»] chr5 (104 HSPs)
chr5 (160-357)||(43592656-43592854)
chr5 (13-156)||(43592444-43592587)
chr5 (13-156)||(43598889-43599032)
chr5 (13-156)||(43604381-43604524)
chr5 (13-156)||(43609873-43610016)
chr5 (196-357)||(31180669-31180830)
chr5 (13-151)||(27445135-27445273)
chr5 (13-151)||(27449979-27450117)
chr5 (15-153)||(15044852-15044992)
chr5 (13-143)||(1456952-1457082)
chr5 (160-314)||(27445350-27445504)
chr5 (160-357)||(27450193-27450409)
chr5 (153-314)||(1456700-1456861)
chr5 (198-362)||(29402545-29402728)
chr5 (153-357)||(15045057-15045279)
chr5 (160-357)||(43599101-43599318)
chr5 (160-357)||(43604593-43604810)
chr5 (160-357)||(43610085-43610302)
chr5 (28-132)||(31180447-31180551)
chr5 (28-122)||(30631640-30631734)
chr5 (196-359)||(30631768-30631950)
chr5 (153-281)||(33768548-33768676)
chr5 (153-281)||(33791680-33791808)
chr5 (153-281)||(2785739-2785867)
chr5 (28-143)||(24136080-24136196)
chr5 (153-281)||(28807171-28807299)
chr5 (153-269)||(37561054-37561170)
chr5 (154-281)||(31396585-31396712)
chr5 (154-281)||(31401442-31401569)
chr5 (28-146)||(35387893-35388012)
chr5 (196-314)||(24136303-24136421)
chr5 (300-357)||(1456638-1456695)
chr5 (300-357)||(27445509-27445566)
chr5 (153-269)||(37556232-37556348)
chr5 (212-314)||(18442068-18442170)
chr5 (212-314)||(26177529-26177631)
chr5 (28-132)||(38219629-38219734)
chr5 (298-350)||(14520794-14520846)
chr5 (212-314)||(9789644-9789746)
chr5 (300-358)||(10592843-10592901)
chr5 (303-349)||(16407650-16407696)
chr5 (196-314)||(22536672-22536790)
chr5 (196-269)||(25077813-25077886)
chr5 (196-269)||(25135782-25135855)
chr5 (300-349)||(37556133-37556182)
chr5 (300-349)||(37560955-37561004)
chr5 (301-357)||(22536796-22536852)
chr5 (15-79)||(28807429-28807493)
chr5 (212-314)||(29720028-29720131)
chr5 (314-357)||(43625605-43625648)
chr5 (298-352)||(12083656-12083710)
chr5 (303-349)||(15465070-15465116)
chr5 (212-314)||(16407704-16407806)
chr5 (303-349)||(16409086-16409132)
chr5 (303-349)||(26177475-26177521)
chr5 (300-345)||(25077718-25077763)
chr5 (300-345)||(25135687-25135732)
chr5 (300-357)||(40379678-40379735)
chr5 (298-349)||(11916453-11916504)
chr5 (303-357)||(24136429-24136484)
chr5 (303-346)||(36931855-36931898)
chr5 (303-345)||(9789754-9789796)
chr5 (196-314)||(10592906-10593023)
chr5 (303-345)||(18442178-18442220)
chr5 (212-314)||(26170420-26170522)
chr5 (300-350)||(28807083-28807133)
chr5 (303-345)||(29719978-29720020)
chr5 (303-345)||(29722165-29722207)
chr5 (303-345)||(29752335-29752377)
chr5 (300-357)||(16543994-16544051)
chr5 (300-357)||(16546216-16546273)
chr5 (308-345)||(35388196-35388233)
chr5 (212-293)||(38219865-38219946)
chr5 (300-357)||(40381889-40381946)
chr5 (301-349)||(9352816-9352864)
chr5 (28-118)||(24553307-24553395)
chr5 (212-314)||(29722215-29722318)
chr5 (306-345)||(29751672-29751711)
chr5 (300-350)||(2785905-2785955)
chr5 (303-349)||(26170366-26170412)
chr5 (300-350)||(31396497-31396547)
chr5 (300-350)||(33768714-33768764)
chr5 (300-350)||(33791846-33791896)
chr5 (15-125)||(37556432-37556541)
chr5 (15-125)||(37561254-37561363)
chr5 (212-293)||(9352891-9352972)
chr5 (15-79)||(2785542-2785608)
chr5 (212-271)||(16409183-16409242)
chr5 (196-247)||(29751564-29751615)
chr5 (15-79)||(31396843-31396909)
chr5 (15-79)||(31401700-31401766)
chr5 (15-79)||(33791483-33791549)
chr5 (28-118)||(36932128-36932216)
chr5 (28-89)||(11181641-11181700)
chr5 (300-350)||(31401354-31401404)
chr5 (30-90)||(7160712-7160770)
chr5 (30-90)||(14520461-14520519)
chr5 (196-265)||(16544105-16544174)
chr5 (196-265)||(16546327-16546396)
chr5 (28-88)||(28832486-28832544)
chr5 (29-79)||(33768365-33768417)
chr5 (196-265)||(40379789-40379858)
chr5 (196-265)||(40382000-40382069)
chr5 (254-314)||(29752267-29752327)
[»] chr4 (72 HSPs)
chr4 (153-358)||(9223898-9224122)
chr4 (153-314)||(9228748-9228909)
chr4 (196-362)||(29761078-29761244)
chr4 (155-314)||(18712317-18712476)
chr4 (13-150)||(51520622-51520759)
chr4 (15-149)||(9224191-9224325)
chr4 (15-149)||(9228978-9229112)
chr4 (22-132)||(18712567-18712677)
chr4 (196-357)||(51520870-51521050)
chr4 (153-357)||(56141511-56141735)
chr4 (196-360)||(24742397-24742580)
chr4 (153-314)||(5733023-5733185)
chr4 (153-357)||(3814383-3814605)
chr4 (28-144)||(24742174-24742291)
chr4 (153-320)||(45356854-45357021)
chr4 (153-281)||(45347412-45347540)
chr4 (15-125)||(3814189-3814299)
chr4 (153-281)||(18856086-18856214)
chr4 (28-118)||(29760874-29760965)
chr4 (300-357)||(9228686-9228743)
chr4 (300-357)||(18856252-18856309)
chr4 (300-357)||(18860464-18860521)
chr4 (15-92)||(45347658-45347735)
chr4 (298-352)||(16628351-16628405)
chr4 (298-352)||(38151916-38151970)
chr4 (300-357)||(5733190-5733247)
chr4 (196-269)||(7122374-7122447)
chr4 (196-269)||(7124596-7124669)
chr4 (301-352)||(3778116-3778167)
chr4 (300-359)||(8392980-8393039)
chr4 (300-350)||(5143809-5143859)
chr4 (19-125)||(5732834-5732940)
chr4 (191-269)||(8393089-8393167)
chr4 (300-350)||(8689044-8689094)
chr4 (212-314)||(13992714-13992816)
chr4 (303-349)||(13992824-13992870)
chr4 (298-352)||(16622772-16622826)
chr4 (212-314)||(31495737-31495839)
chr4 (300-350)||(45347324-45347374)
chr4 (15-125)||(45357105-45357215)
chr4 (300-357)||(8395191-8395248)
chr4 (298-351)||(10047930-10047983)
chr4 (212-293)||(28468061-28468142)
chr4 (28-144)||(28468287-28468404)
chr4 (298-350)||(6742896-6742948)
chr4 (300-350)||(5148244-5148294)
chr4 (300-350)||(5268699-5268749)
chr4 (303-349)||(28467986-28468032)
chr4 (298-350)||(54867743-54867795)
chr4 (300-358)||(7122266-7122324)
chr4 (298-351)||(9194162-9194216)
chr4 (303-345)||(31495847-31495889)
chr4 (303-349)||(31985136-31985182)
chr4 (300-357)||(5135649-5135706)
chr4 (209-269)||(5135756-5135817)
chr4 (300-357)||(5137875-5137932)
chr4 (209-269)||(5137982-5138043)
chr4 (300-345)||(7124501-7124546)
chr4 (196-269)||(8395298-8395371)
chr4 (15-79)||(18855892-18855956)
chr4 (298-346)||(36314715-36314763)
chr4 (298-346)||(36328924-36328972)
chr4 (28-87)||(5112466-5112523)
chr4 (298-346)||(5396176-5396223)
chr4 (28-115)||(16628655-16628740)
chr4 (28-90)||(3777778-3777838)
chr4 (28-90)||(5396479-5396539)
chr4 (28-90)||(16623101-16623161)
chr4 (30-90)||(5269008-5269066)
chr4 (232-269)||(56141713-56141750)
chr4 (28-87)||(6743226-6743283)
chr4 (31-90)||(25861841-25861898)
[»] chr7 (81 HSPs)
chr7 (13-153)||(12397076-12397216)
chr7 (160-357)||(12406641-12406857)
chr7 (153-357)||(4873498-4873721)
chr7 (16-145)||(24024115-24024244)
chr7 (153-314)||(24023881-24024042)
chr7 (153-314)||(31109132-31109294)
chr7 (30-153)||(4873310-4873433)
chr7 (15-145)||(31109369-31109502)
chr7 (196-357)||(2058425-2058604)
chr7 (28-146)||(2058202-2058320)
chr7 (196-357)||(21640243-21640423)
chr7 (209-314)||(20357090-20357195)
chr7 (28-132)||(20357306-20357410)
chr7 (13-102)||(12406496-12406585)
chr7 (28-144)||(1533190-1533307)
chr7 (160-314)||(12397289-12397430)
chr7 (153-281)||(24265772-24265900)
chr7 (196-314)||(24789489-24789607)
chr7 (153-281)||(16880437-16880565)
chr7 (153-281)||(16885292-16885420)
chr7 (153-281)||(21811834-21811962)
chr7 (300-357)||(20357028-20357085)
chr7 (28-144)||(21640039-21640156)
chr7 (196-268)||(24260929-24261001)
chr7 (196-314)||(1532966-1533084)
chr7 (300-357)||(12397435-12397492)
chr7 (209-314)||(21646475-21646580)
chr7 (301-357)||(24023819-24023875)
chr7 (212-314)||(25767381-25767483)
chr7 (212-314)||(43504556-43504658)
chr7 (28-144)||(18408993-18409110)
chr7 (28-144)||(18413869-18413986)
chr7 (212-293)||(18414110-18414191)
chr7 (300-357)||(31109070-31109127)
chr7 (28-143)||(21646237-21646353)
chr7 (298-350)||(21983807-21983859)
chr7 (303-357)||(1532884-1532939)
chr7 (298-352)||(79953-80007)
chr7 (196-314)||(20343562-20343680)
chr7 (303-349)||(39730942-39730988)
chr7 (212-314)||(48408461-48408563)
chr7 (300-357)||(1562530-1562587)
chr7 (196-269)||(6592741-6592814)
chr7 (300-357)||(6592864-6592921)
chr7 (196-269)||(6594957-6595030)
chr7 (300-357)||(32060831-32060888)
chr7 (298-349)||(21989471-21989522)
chr7 (212-314)||(18409234-18409336)
chr7 (303-349)||(18414220-18414266)
chr7 (301-359)||(20343498-20343556)
chr7 (212-314)||(39730996-39731098)
chr7 (303-349)||(48408407-48408453)
chr7 (300-357)||(6595080-6595137)
chr7 (300-349)||(21811747-21811796)
chr7 (196-269)||(32060708-32060781)
chr7 (300-349)||(47264209-47264258)
chr7 (305-349)||(21646590-21646634)
chr7 (303-346)||(43504666-43504709)
chr7 (300-358)||(18392723-18392781)
chr7 (303-349)||(18409344-18409390)
chr7 (300-349)||(2479902-2479951)
chr7 (300-349)||(44847628-44847677)
chr7 (298-350)||(46515809-46515862)
chr7 (196-268)||(1562407-1562479)
chr7 (300-359)||(24260819-24260878)
chr7 (15-79)||(19992479-19992544)
chr7 (15-79)||(21812092-21812157)
chr7 (301-357)||(18390506-18390562)
chr7 (300-344)||(49092238-49092282)
chr7 (28-118)||(2479565-2479653)
chr7 (28-118)||(2580619-2580706)
chr7 (28-90)||(20284318-20284378)
chr7 (28-90)||(23402821-23402881)
chr7 (15-79)||(24266054-24266120)
chr7 (28-89)||(4796477-4796536)
chr7 (28-132)||(46516070-46516173)
chr7 (196-265)||(18389164-18389233)
chr7 (196-265)||(18392600-18392669)
chr7 (30-90)||(44847933-44847991)
chr7 (298-350)||(2647179-2647230)
chr7 (28-87)||(21989137-21989194)
[»] chr1 (62 HSPs)
chr1 (196-357)||(24793666-24793827)
chr1 (153-359)||(41398618-41398823)
chr1 (15-153)||(41398402-41398542)
chr1 (15-153)||(41390747-41390887)
chr1 (153-357)||(41390963-41391185)
chr1 (29-144)||(24787111-24787226)
chr1 (153-281)||(1054609-1054737)
chr1 (153-281)||(39445859-39445987)
chr1 (196-293)||(24786908-24787005)
chr1 (153-281)||(44023472-44023600)
chr1 (153-281)||(25439494-25439622)
chr1 (28-145)||(24202517-24202635)
chr1 (153-281)||(25444687-25444815)
chr1 (153-281)||(43988044-43988172)
chr1 (196-314)||(20622640-20622758)
chr1 (300-357)||(39446025-39446082)
chr1 (300-357)||(44023377-44023434)
chr1 (212-314)||(19360975-19361077)
chr1 (300-357)||(1054514-1054571)
chr1 (28-144)||(19366057-19366174)
chr1 (298-350)||(13598965-13599017)
chr1 (214-314)||(19365831-19365931)
chr1 (298-349)||(21536121-21536172)
chr1 (303-349)||(24202260-24202306)
chr1 (300-350)||(25439406-25439456)
chr1 (15-125)||(25439705-25439815)
chr1 (300-350)||(25444599-25444649)
chr1 (15-125)||(25444898-25445008)
chr1 (212-314)||(51765053-51765155)
chr1 (300-357)||(9036003-9036060)
chr1 (300-357)||(44203218-44203275)
chr1 (196-269)||(44203325-44203398)
chr1 (298-350)||(37070332-37070384)
chr1 (298-357)||(13659838-13659897)
chr1 (303-358)||(21053539-21053594)
chr1 (15-125)||(1054821-1054931)
chr1 (303-349)||(19360921-19360967)
chr1 (15-125)||(39445665-39445775)
chr1 (15-125)||(44023683-44023793)
chr1 (303-349)||(51764999-51765045)
chr1 (28-144)||(19358593-19358709)
chr1 (28-144)||(19361182-19361298)
chr1 (301-345)||(13604108-13604152)
chr1 (298-349)||(3282271-3282322)
chr1 (212-271)||(9986891-9986950)
chr1 (303-345)||(9986798-9986840)
chr1 (303-345)||(19365781-19365823)
chr1 (303-345)||(20622766-20622808)
chr1 (298-350)||(16124188-16124240)
chr1 (212-314)||(40282021-40282124)
chr1 (196-314)||(9036065-9036183)
chr1 (300-350)||(26644381-26644431)
chr1 (303-345)||(40281971-40282013)
chr1 (212-271)||(21053645-21053705)
chr1 (28-118)||(13604402-13604490)
chr1 (298-337)||(29652379-29652418)
chr1 (15-79)||(43988314-43988380)
chr1 (28-90)||(47098633-47098693)
chr1 (28-90)||(47102647-47102707)
chr1 (28-89)||(3281936-3281995)
chr1 (298-351)||(10924807-10924860)
chr1 (30-89)||(37069998-37070055)
[»] chr3 (124 HSPs)
chr3 (196-357)||(8738542-8738703)
chr3 (196-357)||(9090780-9090941)
chr3 (13-143)||(22172985-22173115)
chr3 (153-314)||(28503381-28503542)
chr3 (196-357)||(7167702-7167882)
chr3 (192-314)||(28501214-28501336)
chr3 (160-314)||(22172724-22172878)
chr3 (153-314)||(18656805-18656967)
chr3 (196-314)||(40372318-40372436)
chr3 (196-314)||(27352143-27352261)
chr3 (28-144)||(8738809-8738926)
chr3 (28-147)||(40372539-40372659)
chr3 (196-314)||(2671127-2671245)
chr3 (28-143)||(7167478-7167595)
chr3 (28-143)||(2671333-2671449)
chr3 (28-146)||(8477598-8477717)
chr3 (196-314)||(8477822-8477940)
chr3 (28-125)||(28501462-28501560)
chr3 (28-125)||(28503629-28503727)
chr3 (196-357)||(6718288-6718449)
chr3 (28-144)||(9091047-9091164)
chr3 (212-349)||(32143782-32143919)
chr3 (153-281)||(2672514-2672642)
chr3 (153-281)||(8512604-8512732)
chr3 (153-281)||(8517484-8517612)
chr3 (196-357)||(45282585-45282746)
chr3 (153-281)||(2676670-2676798)
chr3 (153-281)||(24968481-24968609)
chr3 (153-268)||(32475848-32475963)
chr3 (153-268)||(32480706-32480821)
chr3 (300-357)||(22172662-22172719)
chr3 (300-357)||(40372256-40372313)
chr3 (212-314)||(1306439-1306541)
chr3 (300-357)||(28501152-28501209)
chr3 (300-357)||(28503319-28503376)
chr3 (212-344)||(27985971-27986103)
chr3 (298-352)||(30709264-30709318)
chr3 (300-357)||(18656972-18657029)
chr3 (300-352)||(36029659-36029711)
chr3 (191-311)||(54634775-54634895)
chr3 (299-350)||(21711767-21711818)
chr3 (254-349)||(27974442-27974537)
chr3 (196-314)||(6716147-6716265)
chr3 (19-125)||(18656604-18656710)
chr3 (303-349)||(23198475-23198521)
chr3 (303-349)||(23200674-23200720)
chr3 (303-349)||(26928089-26928135)
chr3 (28-144)||(1306179-1306296)
chr3 (300-357)||(3617034-3617091)
chr3 (299-352)||(16264895-16264948)
chr3 (443-499)||(17354581-17354635)
chr3 (300-357)||(54634710-54634767)
chr3 (298-350)||(39032025-39032077)
chr3 (298-357)||(16498637-16498696)
chr3 (298-345)||(27027271-27027318)
chr3 (298-345)||(40734087-40734134)
chr3 (212-314)||(800748-800850)
chr3 (196-269)||(4598926-4599000)
chr3 (196-269)||(4601147-4601221)
chr3 (298-352)||(35926055-35926108)
chr3 (303-349)||(37726244-37726290)
chr3 (300-349)||(2672427-2672476)
chr3 (300-349)||(2676583-2676632)
chr3 (300-357)||(4599050-4599107)
chr3 (300-357)||(4601271-4601328)
chr3 (300-357)||(6716085-6716142)
chr3 (313-358)||(8477958-8478003)
chr3 (300-361)||(10055801-10055862)
chr3 (196-269)||(25637120-25637193)
chr3 (298-351)||(48438780-48438833)
chr3 (301-357)||(25637013-25637069)
chr3 (298-350)||(27038606-27038658)
chr3 (301-349)||(37408045-37408093)
chr3 (298-350)||(40592252-40592304)
chr3 (306-349)||(1306552-1306595)
chr3 (307-350)||(1730916-1730959)
chr3 (15-79)||(2676939-2677005)
chr3 (15-79)||(24968274-24968340)
chr3 (303-349)||(7782657-7782703)
chr3 (196-269)||(10055912-10055986)
chr3 (196-269)||(10058134-10058208)
chr3 (196-269)||(10060356-10060430)
chr3 (196-269)||(10062578-10062652)
chr3 (196-269)||(10064800-10064874)
chr3 (196-269)||(10067022-10067096)
chr3 (196-269)||(10208885-10208959)
chr3 (196-269)||(10211085-10211159)
chr3 (298-351)||(24694654-24694708)
chr3 (303-349)||(33386146-33386192)
chr3 (300-345)||(10058039-10058084)
chr3 (300-345)||(10060261-10060306)
chr3 (300-345)||(10062483-10062528)
chr3 (300-345)||(10064705-10064750)
chr3 (300-345)||(10066927-10066972)
chr3 (300-357)||(10208778-10208835)
chr3 (300-357)||(10210978-10211035)
chr3 (212-293)||(26928164-26928245)
chr3 (15-79)||(2672783-2672849)
chr3 (28-118)||(27986225-27986313)
chr3 (298-345)||(40735018-40735065)
chr3 (303-345)||(800698-800740)
chr3 (212-314)||(23198365-23198467)
chr3 (303-349)||(27453526-27453572)
chr3 (300-350)||(32476014-32476064)
chr3 (300-350)||(32480872-32480922)
chr3 (212-314)||(33386200-33386302)
chr3 (306-351)||(47923326-47923371)
chr3 (209-269)||(3617141-3617201)
chr3 (31-90)||(4386774-4386831)
chr3 (15-79)||(8512384-8512450)
chr3 (15-79)||(8517264-8517330)
chr3 (28-90)||(23392106-23392166)
chr3 (28-90)||(24694963-24695023)
chr3 (28-90)||(26928396-26928456)
chr3 (28-90)||(36029322-36029382)
chr3 (28-90)||(40592579-40592639)
chr3 (298-329)||(43404484-43404515)
chr3 (212-290)||(23200564-23200642)
chr3 (232-269)||(28503520-28503557)
chr3 (300-345)||(40845221-40845266)
chr3 (31-90)||(21711454-21711511)
chr3 (31-90)||(23410529-23410586)
chr3 (28-107)||(32143552-32143629)
chr3 (28-87)||(47923704-47923761)
[»] scaffold0135 (2 HSPs)
scaffold0135 (153-358)||(34553-34777)
scaffold0135 (15-149)||(34846-34980)
[»] chr2 (57 HSPs)
chr2 (153-314)||(39811539-39811700)
chr2 (15-145)||(39811775-39811907)
chr2 (196-357)||(11098387-11098567)
chr2 (196-358)||(14291945-14292126)
chr2 (196-314)||(9295924-9296042)
chr2 (28-143)||(11098674-11098790)
chr2 (28-145)||(14291722-14291840)
chr2 (28-144)||(9296148-9296265)
chr2 (153-281)||(19344786-19344914)
chr2 (153-281)||(19349644-19349772)
chr2 (212-314)||(3492212-3492314)
chr2 (300-357)||(9295862-9295919)
chr2 (212-349)||(28258678-28258815)
chr2 (300-357)||(32247295-32247352)
chr2 (300-357)||(39811477-39811534)
chr2 (300-357)||(44310471-44310528)
chr2 (212-314)||(30832984-30833086)
chr2 (153-247)||(32247150-32247244)
chr2 (28-143)||(25409860-25409976)
chr2 (212-314)||(4484758-4484860)
chr2 (298-352)||(8389629-8389683)
chr2 (15-125)||(32246954-32247064)
chr2 (209-314)||(25410098-25410203)
chr2 (298-352)||(10706731-10706785)
chr2 (303-349)||(25410211-25410257)
chr2 (303-349)||(32289157-32289203)
chr2 (196-269)||(12647787-12647860)
chr2 (300-357)||(12647910-12647967)
chr2 (298-351)||(21630509-21630562)
chr2 (298-351)||(39483441-39483494)
chr2 (298-350)||(33528105-33528157)
chr2 (306-349)||(30832930-30832973)
chr2 (303-345)||(4484868-4484910)
chr2 (298-352)||(23077950-23078004)
chr2 (300-350)||(36757425-36757475)
chr2 (303-349)||(40739402-40739448)
chr2 (28-131)||(3491981-3492085)
chr2 (306-350)||(20522794-20522838)
chr2 (212-314)||(6266337-6266439)
chr2 (212-314)||(32289211-32289313)
chr2 (28-118)||(40739063-40739151)
chr2 (303-345)||(6266287-6266329)
chr2 (298-352)||(13569894-13569948)
chr2 (300-350)||(19344952-19345002)
chr2 (212-293)||(40739292-40739373)
chr2 (313-349)||(3492332-3492368)
chr2 (28-118)||(23078251-23078339)
chr2 (28-90)||(36757570-36757630)
chr2 (28-90)||(39483162-39483222)
chr2 (28-125)||(17865434-17865529)
chr2 (15-79)||(19344588-19344655)
chr2 (15-79)||(19349446-19349513)
chr2 (309-350)||(19349819-19349860)
chr2 (28-88)||(21630174-21630232)
chr2 (50-90)||(20522471-20522511)
chr2 (28-91)||(29867780-29867840)
chr2 (28-90)||(41586358-41586419)
[»] scaffold0355 (4 HSPs)
scaffold0355 (155-314)||(3399-3558)
scaffold0355 (15-153)||(3627-3767)
scaffold0355 (300-357)||(3337-3394)
scaffold0355 (15-63)||(9514-9562)
[»] scaffold0286 (2 HSPs)
scaffold0286 (197-314)||(22002-22119)
scaffold0286 (311-349)||(21948-21986)
[»] scaffold0009 (2 HSPs)
scaffold0009 (153-281)||(176545-176673)
scaffold0009 (15-79)||(176829-176895)
[»] scaffold0464 (3 HSPs)
scaffold0464 (153-281)||(722-850)
scaffold0464 (300-357)||(888-945)
scaffold0464 (15-125)||(528-638)
[»] scaffold0259 (3 HSPs)
scaffold0259 (153-281)||(1834-1962)
scaffold0259 (15-79)||(2103-2169)
scaffold0259 (300-350)||(1746-1796)
[»] scaffold0028 (3 HSPs)
scaffold0028 (153-281)||(148539-148667)
scaffold0028 (15-79)||(148808-148874)
scaffold0028 (300-350)||(148451-148501)
[»] scaffold0197 (5 HSPs)
scaffold0197 (153-281)||(13879-14007)
scaffold0197 (157-281)||(18759-18883)
scaffold0197 (15-79)||(14161-14227)
scaffold0197 (300-350)||(18671-18721)
scaffold0197 (30-79)||(19017-19068)
[»] scaffold0188 (4 HSPs)
scaffold0188 (28-144)||(17701-17818)
scaffold0188 (28-144)||(23794-23911)
scaffold0188 (209-314)||(17494-17599)
scaffold0188 (303-349)||(17440-17486)
[»] scaffold1455 (1 HSPs)
scaffold1455 (300-357)||(1709-1766)
[»] scaffold0491 (4 HSPs)
scaffold0491 (212-314)||(11589-11690)
scaffold0491 (303-349)||(9253-9299)
scaffold0491 (212-314)||(9144-9245)
scaffold0491 (303-349)||(11698-11744)
[»] scaffold0674 (2 HSPs)
scaffold0674 (196-269)||(4130-4203)
scaffold0674 (300-357)||(4253-4310)
[»] scaffold0098 (1 HSPs)
scaffold0098 (232-349)||(45678-45795)
[»] scaffold0006 (5 HSPs)
scaffold0006 (298-350)||(6250-6302)
scaffold0006 (298-350)||(3058-3110)
scaffold0006 (298-357)||(149599-149658)
scaffold0006 (301-345)||(132765-132809)
scaffold0006 (28-118)||(133059-133147)
[»] scaffold0565 (2 HSPs)
scaffold0565 (210-269)||(3019-3078)
scaffold0565 (300-357)||(3128-3185)
[»] scaffold1519 (1 HSPs)
scaffold1519 (212-314)||(545-647)
[»] scaffold0140 (2 HSPs)
scaffold0140 (303-349)||(7920-7966)
scaffold0140 (28-118)||(8197-8285)
[»] scaffold0087 (3 HSPs)
scaffold0087 (236-350)||(36332-36446)
scaffold0087 (301-349)||(43443-43491)
scaffold0087 (28-90)||(36640-36700)
[»] scaffold0137 (1 HSPs)
scaffold0137 (300-357)||(5859-5916)
[»] scaffold0036 (1 HSPs)
scaffold0036 (298-352)||(86151-86206)
[»] scaffold0510 (2 HSPs)
scaffold0510 (300-345)||(1096-1141)
scaffold0510 (212-269)||(1191-1248)


Alignment Details
Target: chr6 (Bit Score: 177; Significance: 3e-95; HSPs: 87)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 153 - 357
Target Start/End: Complemental strand, 14737289 - 14737085
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14737289 tccctagatcgtgtcacgatctgcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaa 14737190  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 352  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14737189 gatcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 14737090  T
Q  353 caaca 357  Q
    |||||    
T  14737089 caaca 14737085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 22010617 - 22010477
Alignment:
Q  13 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010617 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 22010518  T
Q  113 caagttctctctcaaagctcatacaagctctcttaagttct 153  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  22010517 caagttctctctctaagctcatacaagctctcttaagttct 22010477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 11857139 - 11857282
Alignment:
Q  13 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11857139 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 11857238  T
Q  113 caagttctctctcaaagctcatacaagctctcttaagttctccc 156  Q
    ||||||||||||| |||||||| |||||||||||||||||||||    
T  11857239 caagttctctctctaagctcattcaagctctcttaagttctccc 11857282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 15 - 154
Target Start/End: Complemental strand, 14737495 - 14737356
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14737495 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgttatcca 14737396  T
Q  115 agttctctctcaaagctcatacaagctctcttaagttctc 154  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14737395 agttctctctcaaagctcatacaagctctcttaagttctc 14737356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 196 - 357
Target Start/End: Original strand, 5266492 - 5266653
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  5266492 agtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 5266591  T
Q  296 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5266592 ctcgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 5266653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 22010412 - 22010251
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    |||||||||||||||||||| || ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010412 tccctagatcgtgtcacgatttgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 22010313  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 314  Q
    ||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  22010312 gatcgtgccacgatttggcgtcctgcaaactaacttacggccacttgaaatcgtgtcacgat 22010251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 157 - 314
Target Start/End: Complemental strand, 14742145 - 14741988
Alignment:
Q  157 tagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatc 256  Q
    ||||||||||||||||||| ||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14742145 tagatcgtgtcacgatctgcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatc 14742046  T
Q  257 gtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 314  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  14742045 gtgccacgatttggcgtcctgcaaactagctcacgaccacttgaaatcgtgtcacgat 14741988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 14742355 - 14742222
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  14742355 tatgaaccctaaaacccaaagtgattacaatgtttttcccaacccaagagacactctcaacaaagacacttaacccattggttccctcctttgttatcca 14742256  T
Q  115 agttctctctcaaagctcatacaagctctcttaa 148  Q
    ||||||||||||||||||||||||||||||||||    
T  14742255 agttctctctcaaagctcatacaagctctcttaa 14742222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 160 - 357
Target Start/End: Original strand, 11857351 - 11857567
Alignment:
Q  160 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 259  Q
    ||||||||||||| || ||||||| |||||  |||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11857351 atcgtgtcacgatttgcaacggacccaaggttgacaagtccttatcagtgttacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtg 11857450  T
Q  260 ccacgatttggcgtcctgcaaagtagctcacggccacttgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatt 340  Q
    |||||||||||||||||||||| |||||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||    
T  11857451 ccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 11857550  T
Q  341 tgaagccaatatcaaca 357  Q
    |||||||||||||||||    
T  11857551 tgaagccaatatcaaca 11857567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 153 - 350
Target Start/End: Complemental strand, 28155294 - 28155097
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  28155294 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaa 28155195  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa-gtagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||||| ||  ||||||||  | |||||||| ||  | | |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28155194 gatcgtgccacgattttgcaccctgcaaacttggctcacgg-catctcagatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 28155097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 209 - 314
Target Start/End: Complemental strand, 30125185 - 30125080
Alignment:
Q  209 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgt 308  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||  || ||||||||||    
T  30125185 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgt 30125086  T
Q  309 cacgat 314  Q
    ||||||    
T  30125085 cacgat 30125080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 16839107 - 16839235
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | |||||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  16839107 tccctagatcgtgtcacgatctgcaacggtcccaaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 16839206  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  16839207 gatcgtgccacgattttgcttccagcaaa 16839235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 5674633 - 5674516
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||| || ||||||     
T  5674633 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttatctctct 5674534  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  5674533 aagctcttccaagctctc 5674516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 6005783 - 6005911
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  6005783 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 6005882  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  6005883 gatcgtgccacgattttgcttccagcaaa 6005911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 33330156 - 33330028
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  33330156 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 33330057  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  33330056 gatcgtgccacgattttgcttccagcaaa 33330028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 33335653 - 33335525
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  33335653 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 33335554  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  33335553 gatcgtgccacgattttgcttccagcaaa 33335525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 153 - 267
Target Start/End: Original strand, 6438860 - 6438974
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| |||||   | |||  ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  6438860 tccctagatcgtgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaa 6438959  T
Q  253 gatcgtgccacgatt 267  Q
    |||||||||||||||    
T  6438960 gatcgtgccacgatt 6438974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 153 - 268
Target Start/End: Original strand, 5343841 - 5343956
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    |||||||||||||||||||| || ||||| | | | |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  5343841 tccctagatcgtgtcacgatatgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 5343940  T
Q  253 gatcgtgccacgattt 268  Q
    ||||||| ||||||||    
T  5343941 gatcgtgtcacgattt 5343956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 14741983 - 14741926
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14741983 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 14741926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 196 - 357
Target Start/End: Complemental strand, 16652877 - 16652716
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||   || |||||||||||| || | ||||| |||||| || ||  ||| |||  |||||||||||      
T  16652877 agtccttatcaaggatacttaacgagcaagtttcacgattgtgtcacgattttcccaaatcgttccacgactttgcaccctacaacctagctcacggcac 16652778  T
Q  296 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |  ||||||||||||||||||| |||||||| |||||||||||||||||| |||| ||||||    
T  16652777 cccgaaatcgtgtcacgatttccctgttctttcagaccacaaatttgaagacaatctcaaca 16652716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 22010246 - 22010189
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010246 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 22010189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 30125075 - 30125018
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30125075 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 30125018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 28184671 - 28184757
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgttttt---cccaacccaagagacactctcaacaaagacactcaacccattggttc 98  Q
    |||||||||||||||||||||||||||| ||||||||   || ||||||||||||||||||||||||||| ||||||||||| ||||    
T  28184671 tatgaaccctaaaacccaaggtgattactatgtttttttcccaaacccaagagacactctcaacaaagaccctcaacccatttgttc 28184757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 2171939 - 2172041
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  2171939 acttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 2172038  T
Q  312 gat 314  Q
    |||    
T  2172039 gat 2172041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 28155489 - 28155379
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| || ||||| || ||||  ||||| | ||||    
T  28155489 tatgaaccctaaatcccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaaggcacacaccccataggatcccctctttgatctcca 28155390  T
Q  115 agttctctctc 125  Q
    |||| ||||||    
T  28155389 agttttctctc 28155379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 196 - 293
Target Start/End: Complemental strand, 5674410 - 5674313
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 293  Q
    |||||||| ||  |||||||||||||||||||||  |||||||||||||||||||||||| ||| |||||||||||  ||||||||  ||||||||||    
T  5674410 agtccttatcacggatacttaacgagcaagtttcaaaatcgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggc 5674313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 196 - 268
Target Start/End: Original strand, 6136367 - 6136439
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 268  Q
    |||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||    
T  6136367 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattt 6136439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 314
Target Start/End: Original strand, 16578921 - 16579039
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | ||||||||||||||| ||  |||||||  |||||||||||      
T  16578921 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcac 16579020  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    |  ||||||||||||||||    
T  16579021 cccgaaatcgtgtcacgat 16579039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 16616459 - 16616341
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | ||||||||||||||| ||  |||||||  |||||||||||      
T  16616459 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcac 16616360  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    |  ||||||||||||||||    
T  16616359 cccgaaatcgtgtcacgat 16616341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 6439026 - 6439083
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  6439026 aaatcgtgtcacgatttctatgttcttccagaccataaatttgaagccaatttcaaca 6439083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 16579044 - 16579101
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16579044 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16579101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 16616336 - 16616279
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16616336 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16616279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 212 - 281
Target Start/End: Original strand, 22709480 - 22709549
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  22709480 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 22709549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 209 - 314
Target Start/End: Complemental strand, 27647635 - 27647530
Alignment:
Q  209 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgt 308  Q
    |||||||||||||||||||||   |||||||||||||||| ||  ||||||||||||||| ||  |||||||  |||||||||||  |  ||||||||||    
T  27647635 gatacttaacgagcaagtttcacgatcgtgtcacgatttctcacaatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgt 27647536  T
Q  309 cacgat 314  Q
    ||||||    
T  27647535 cacgat 27647530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 350
Target Start/End: Complemental strand, 5017028 - 5016976
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  5017028 tgaaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaat 5016976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 357
Target Start/End: Complemental strand, 5674281 - 5674229
Alignment:
Q  306 tgtcacgatttctctgttcttccagaccacaaatttgaagccaa-tatcaaca 357  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5674281 tgtcacgatttctctgttcttccagaccacaaatttgaagccaactatcaaca 5674229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 6027001 - 6026941
Alignment:
Q  209 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    ||||||||||||||||||||||| ||||||||||||||| || | ||||||||||||||||    
T  6027001 gatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttg 6026941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 350
Target Start/End: Complemental strand, 31086005 - 31085953
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  31086005 tgaaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaat 31085953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 6438666 - 6438776
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || ||||| || ||||  ||||| | ||||    
T  6438666 tatgaacccaaaatcccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccataggatcccctctttgatctcca 6438765  T
Q  115 agttctctctc 125  Q
    || | ||||||    
T  6438766 agatttctctc 6438776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 22709590 - 22709636
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  22709590 tcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaa 22709636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 33342507 - 33342581
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttccca-agatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||||||    
T  33342507 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttg 33342581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 6136490 - 6136547
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  6136490 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 6136547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 16554511 - 16554454
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16554511 aaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16554454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 16631067 - 16631010
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16631067 aaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16631010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 25420854 - 25420797
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  25420854 aaattgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 25420797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 360
Target Start/End: Original strand, 5344007 - 5344067
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagta 360  Q
    |||||||| ||||||||||||||||| ||| ||||||||||||||||||||  ||||||||    
T  5344007 aaatcgtgacacgatttctctgttctcccaaaccacaaatttgaagccaattccaacagta 5344067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 301 - 345
Target Start/End: Complemental strand, 27647524 - 27647480
Alignment:
Q  301 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  27647524 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 27647480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 16838911 - 16838977
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  16838911 tatgaaccctaaatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 16838977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 33330363 - 33330297
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  33330363 tatgaaccctaaatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33330297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 33335860 - 33335794
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  33335860 tatgaaccctaaatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33335794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 411851 - 411769
Alignment:
Q  212 acttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 293  Q
    ||||||||||||||||| |  ||||||||||||||||||||  |||||| |||||||||||  |||||| | |||||||||||    
T  411851 acttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggc 411769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 13151030 - 13150956
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  13151030 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 13150956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 16554634 - 16554516
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||||||| |||| ||  |||| ||  |||||||||||      
T  16554634 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacggcac 16554535  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    |  ||||||||||||||||    
T  16554534 cccgaaatcgtgtcacgat 16554516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 16631190 - 16631072
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||||||| |||| ||  |||| ||  |||||||||||      
T  16631190 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacggcac 16631091  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    |  ||||||||||||||||    
T  16631090 cccgaaatcgtgtcacgat 16631072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 26253644 - 26253602
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  26253644 tcgtgtcacgatttctctgttctttcagaccacaaatttgaag 26253602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 33342631 - 33342689
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 358  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||| |||| |||||||    
T  33342631 aaatcgtgtcacgatttccatgttcttccaaaccacaaatttgaagacaatctcaacag 33342689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 34164625 - 34164551
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  34164625 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttg 34164551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 34166847 - 34166773
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  34166847 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 34166773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 24714936 - 24714989
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccac-aaatttgaagccaat 350  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  24714936 tgaaatcgtgtcacgatttctctgtttttccaaaccacaaaatttgaagccaat 24714989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 25420977 - 25420904
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | ||||||||||||||||    
T  25420977 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgatttg 25420904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 34166723 - 34166678
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  34166723 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 34166678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 357
Target Start/End: Complemental strand, 6026890 - 6026834
Alignment:
Q  301 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||| || |||||||| ||||||||||||||| |||| ||||||    
T  6026890 aatcgtgtcacgatttccctattcttccaaaccacaaatttgaagacaatctcaaca 6026834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 18234648 - 18234700
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||  ||||||||||||||||| ||||||||||| ||||||||    
T  18234648 tgaaatcgtgtcaacatttctctgttcttccaaaccacaaatttaaagccaat 18234700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 411740 - 411698
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  411740 tcgtgtcacgatttccctattcttccagaccacaaatttgaag 411698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 349
Target Start/End: Original strand, 2172057 - 2172095
Alignment:
Q  311 cgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  2172057 cgatttctctgttcttccagaccacaaatttgaaaccaa 2172095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 3073178 - 3073280
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   |||||||||||||||||| |  |||||| |||||||||||  |||| | |  ||||||||||  |  |||||||||||||    
T  3073178 acttaacgagcaagtttgcaaatcgtgtcacgatttccaacaatcgtgtcacgatttggcaccctgtagaccagctcacggcatcacgaaatcgtgtcac 3073277  T
Q  312 gat 314  Q
    |||    
T  3073278 gat 3073280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 3073288 - 3073330
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  3073288 tcgtgtcacgattttcctgttcttccagaccacaaatttgaag 3073330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 16839273 - 16839323
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  16839273 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 16839323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 33329990 - 33329940
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  33329990 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33329940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 13150906 - 13150861
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||    
T  13150906 aaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 13150861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 22709241 - 22709327
Alignment:
Q  30 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 118  Q
    |||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  |||||||||    
T  22709241 ccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtt 22709327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 345
Target Start/End: Original strand, 23896899 - 23896944
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||||| ||||||||| || |||||||||||||||    
T  23896899 aaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaag 23896944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 33335477 - 33335437
Alignment:
Q  310 acgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  33335477 acgattcctctgttcttccaaaccacaaatttgaagccaat 33335437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 345
Target Start/End: Complemental strand, 34151884 - 34151840
Alignment:
Q  301 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||    
T  34151884 aatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 34151840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 345
Target Start/End: Complemental strand, 34164500 - 34164456
Alignment:
Q  301 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||    
T  34164500 aatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 34164456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 329
Target Start/End: Original strand, 603770 - 603801
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttcca 329  Q
    ||||||||||||||||||||||||||||||||    
T  603770 tgaaatcgtgtcacgatttctctgttcttcca 603801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 5017364 - 5017304
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  5017364 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 5017304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 5571808 - 5571761
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||||||||||| |||| ||| | |||||||||||||    
T  5571808 tgaaatcgtgtcacgatttctctattctcccaaaacacaaatttgaag 5571761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 6005584 - 6005650
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  6005584 tatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 6005650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 352
Target Start/End: Complemental strand, 21272514 - 21272467
Alignment:
Q  305 gtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 352  Q
    ||||||||||||| |||||| |||| | ||||||||||||||||||||    
T  21272514 gtgtcacgatttccctgttcctccaaaacacaaatttgaagccaatat 21272467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 31936804 - 31936892
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 118  Q
    |||||||||| |||||||||||  |||||||||| |||  ||| | |||||||||||||||||    ||| |||||||||| |||||||||    
T  31936804 acccaaggtgtttacaatgttt--cccaacccaatagatcctcactacaaagacactcaaccctaaagttacctcctttgcaatccaagtt 31936892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 6005949 - 6005999
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||| | ||||||| ||||||| ||||| ||||||||||||||||||||    
T  6005949 aaatcgcgacacgattcctctgtttttccaaaccacaaatttgaagccaat 6005999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 6097931 - 6097973
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||| |||||| ||||||||||| |||||||||||||||    
T  6097931 tcgtgtcaggatttccctgttcttccaaaccacaaatttgaag 6097973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 5343644 - 5343756
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 112  Q
    |||||||||  || |||||||||||||||||||  ||||||||||| ||||  |||||||| |||||  || || ||||  || ||||  ||||| ||||    
T  5343644 tatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagattcactctcatcaaaggaacacaccccaaaggatcccatctttgatatc 5343743  T
Q  113 caagttctctctc 125  Q
    |||||| ||||||    
T  5343744 caagttttctctc 5343756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 5757116 - 5757059
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    ||||||| |||||||||   ||||||||||||||||| ||| ||||| ||||||||||    
T  5757116 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaatcgtaccacgatttg 5757059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 23896792 - 23896849
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    ||||||| |||||||||   ||||||||||||||||| ||| ||||| ||||||||||    
T  23896792 acttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttg 23896849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 350
Target Start/End: Complemental strand, 10076724 - 10076672
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    ||||||| ||||||||||| ||||||||| || | ||||||||| ||||||||    
T  10076724 tgaaatcatgtcacgatttttctgttctttcaaaacacaaatttaaagccaat 10076672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 157; Significance: 3e-83; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 177 - 357
Target Start/End: Original strand, 8093 - 8273
Alignment:
Q  177 aacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcct 276  Q
    ||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8093 aacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcct 8192  T
Q  277 gcaaagtagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8193 gcaaactagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 8273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 4e-79; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 160 - 357
Target Start/End: Complemental strand, 10688815 - 10688618
Alignment:
Q  160 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 259  Q
    ||||||||||||| || | | ||| |||||  ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10688815 atcgtgtcacgatttgcatctgacccaaggttgacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 10688716  T
Q  260 ccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10688715 ccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 10688618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 153 - 357
Target Start/End: Complemental strand, 25327887 - 25327664
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||| ||| ||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25327887 tccctagatcgtgtcacgagctgcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 25327788  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaat-------------------cgtgtcacgatttctctgttcttccagacc 333  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||||||                   ||||||||||||||||||||||||||||||    
T  25327787 gatcgtgccatgatttggcgtcctgcaaactagctcacagccacttgaaatcgtgccacgaagccaaaatcgtgtcacgatttctctgttcttccagacc 25327688  T
Q  334 acaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||    
T  25327687 acaaatttgaagccaatatcaaca 25327664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 7289846 - 7289713
Alignment:
Q  13 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7289846 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 7289747  T
Q  113 caagttctctctcaaagctcatacaagctctctt 146  Q
    ||||||||||||| |||||| | |||||||||||    
T  7289746 caagttctctctctaagctcttccaagctctctt 7289713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 153 - 358
Target Start/End: Complemental strand, 10683962 - 10683738
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | | |  ||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10683962 tccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 10683863  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtca-------------------cgatttctctgttcttccagacc 333  Q
    ||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||                   |||||||||||||||||||||||    
T  10683862 gatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagacc 10683763  T
Q  334 acaaatttgaagccaatatcaacag 358  Q
    |||||||||||||||||||||||||    
T  10683762 acaaatttgaagccaatatcaacag 10683738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 160 - 314
Target Start/End: Original strand, 6311719 - 6311873
Alignment:
Q  160 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 259  Q
    ||||||||||||| || | | ||| |||||  ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6311719 atcgtgtcacgatttgcatctgacccaaggttgacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 6311818  T
Q  260 ccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 314  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  6311819 ccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgat 6311873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 160 - 358
Target Start/End: Complemental strand, 18852844 - 18852626
Alignment:
Q  160 atcgtgtcacgatctgtaacggactcaaggca-gacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 258  Q
    ||||||||||||||||   | ||| ||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18852844 atcgtgtcacgatctgcgtctgacccaaggtatgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 18852745  T
Q  259 gccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtca-------------------cgatttctctgttcttccagaccacaaat 339  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||||||                   |||||||||||||||||||||||||||||    
T  18852744 gccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtatcacgatttctctgttcttccagaccacaaat 18852645  T
Q  340 ttgaagccaatatcaacag 358  Q
    |||||||||||||||||||    
T  18852644 ttgaagccaatatcaacag 18852626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 6311532 - 6311649
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctcaa 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |    
T  6311532 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgctatccaagttctatctcta 6311631  T
Q  128 agctcatacaagctctct 145  Q
    ||||| | ||||||||||    
T  6311632 agctcttccaagctctct 6311649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 160 - 314
Target Start/End: Complemental strand, 18870238 - 18870083
Alignment:
Q  160 atcgtgtcacgatctgtaacggactcaaggca-gacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 258  Q
    ||||||||||||||||   | ||| ||||| | ||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18870238 atcgtgtcacgatctgcgtctgacccaaggtatgaccagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 18870139  T
Q  259 gccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 314  Q
    ||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||    
T  18870138 gccacgatttggcgtcctgcaaactagctcacgacatcttgaaatcgtgtcacgat 18870083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 7289651 - 7289489
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    |||| ||||||||||||||| || | | ||  ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  7289651 tcccaagatcgtgtcacgatttgcatctgatccaaggtagacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaa 7289552  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagctcacggc-cacttgaaatcgtgtcacgat 314  Q
    ||||||| ||||||||||||||||||||| ||||||| ||| | |||||||||||||||||||    
T  7289551 gatcgtgtcacgatttggcgtcctgcaaactagctcatggctcccttgaaatcgtgtcacgat 7289489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 196 - 357
Target Start/End: Original strand, 30656102 - 30656282
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  30656102 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 30656201  T
Q  296 cttgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30656202 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 30656282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 196 - 360
Target Start/End: Original strand, 36979834 - 36980017
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||      
T  36979834 agtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 36979933  T
Q  296 cttg-------------------aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagta 360  Q
    || |                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36979934 ctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagta 36980017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 30655880 - 30655996
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctcaa 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  |    
T  30655880 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaagttctctcttta 30655979  T
Q  128 agctcatacaagctctc 144  Q
    ||||| | |||||||||    
T  30655980 agctcttccaagctctc 30655996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 33037467 - 33037349
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||      
T  33037467 agtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcac 33037368  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    || ||||||||||||||||    
T  33037367 ctcgaaatcgtgtcacgat 33037349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 4759714 - 4759596
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  4759714 agtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 4759615  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    || ||||||||||||||||    
T  4759614 ctcgaaatcgtgtcacgat 4759596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 18853030 - 18852913
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||     
T  18853030 acccaaggtgattacaatatttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaagtttctctctct 18852931  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  18852930 aagctcttccaagctctc 18852913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 18870424 - 18870307
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| | |||||||||     
T  18870424 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccatgtttctctctct 18870325  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  18870324 aagctcttccaagctctc 18870307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 25328070 - 25327961
Alignment:
Q  16 atgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||| | |||||    
T  25328070 atgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcatcaaagacacacaacccataggatccctcctttgatctccaa 25327971  T
Q  116 gttctctctc 125  Q
    ||||||||||    
T  25327970 gttctctctc 25327961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 25328196 - 25328087
Alignment:
Q  16 atgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||| | |||||    
T  25328196 atgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcatcaaagacacacaacccataggatccctcctttgatctccaa 25328097  T
Q  116 gttctctctc 125  Q
    ||||||||||    
T  25328096 gttctctctc 25328087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 196 - 357
Target Start/End: Complemental strand, 25689721 - 25689561
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||   ||||||| |||||||||||  ||||||||||||||| ||  |||||||  ||||||||||| |    
T  25689721 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtgacgatttcccacaatcgtgccacgattttgcaccctgcaacctagctcacggc-a 25689623  T
Q  296 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  25689622 cccgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagacaatctcaaca 25689561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 10689003 - 10688884
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| |||||| ||     
T  10689003 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgttatccaagtttctctttct 10688904  T
Q  127 aagctcatacaagctctctt 146  Q
     ||||| | |||||||||||    
T  10688903 tagctcttccaagctctctt 10688884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 33037671 - 33037554
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||  ||||||| |||||||||     
T  33037671 acccaaggtgattacaatgtttttcccaacccaagagacactctctacgaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 33037572  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  33037571 aagctcttccaagctctc 33037554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 39784548 - 39784420
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| |||||||||||||| | |||||||||||||||||||||||||||||||    
T  39784548 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccaacaagtttctgaatcgtgtcacgatttcccaa 39784449  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  39784448 gatcgtgccacgattttgcatccagcaaa 39784420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 153 - 268
Target Start/End: Original strand, 35745755 - 35745870
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||  |||||||||| |||||||||||||||||||||||||||||||||    
T  35745755 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcatagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 35745854  T
Q  253 gatcgtgccacgattt 268  Q
    ||||||||||||||||    
T  35745855 gatcgtgccacgattt 35745870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 4759938 - 4759820
Alignment:
Q  28 acccaaggtgattacaatgttttt-cccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctc 125  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||| |||||||||| ||||||| |||||||||    
T  4759938 acccaaggtgattacaatgttttttcccaacccaagagactctctctacaaagacactcaaccctttggttacctcctttgcaatccaagattctctctc 4759839  T
Q  126 aaagctcatacaagctctc 144  Q
     |||||| | |||||||||    
T  4759838 taagctcttccaagctctc 4759820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 1261820 - 1261703
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  1261820 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 1261721  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  1261720 aagctcttccaagctctc 1261703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 36979611 - 36979726
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| |||||||||| |||||  ||||||| |||||||||     
T  36979611 acccaaggtgattacaatgtttt-cccaacctaagagacactctctacaaagacactcaaccctttggttcccttctttgtaatccaagtttctctctct 36979709  T
Q  127 aagctcatacaagctct 143  Q
    |||||| | ||||||||    
T  36979710 aagctcttccaagctct 36979726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 1261595 - 1261477
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  ||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  |||||||| |||||||||||      
T  1261595 agtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcat 1261496  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    |  ||||||||||||||||    
T  1261495 cacgaaatcgtgtcacgat 1261477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 4759591 - 4759534
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4759591 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 4759534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 18870078 - 18870021
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18870078 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 18870021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 33037344 - 33037287
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33037344 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 33037287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 39784382 - 39784324
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 358  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39784382 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaacag 39784324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 298 - 350
Target Start/End: Complemental strand, 5702011 - 5701959
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5702011 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5701959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 3439267 - 3439150
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  |||||||  |||||||||||      
T  3439267 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaacctagctcacggcac 3439169  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    |  ||||||||||||||||    
T  3439168 cccgaaatcgtgtcacgat 3439150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 39784742 - 39784632
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||| || ||||| || ||||  ||||| | ||||    
T  39784742 tatgaacccaaaatcccaaggtgattacaatgtttttcccaacctaagagactctctcatcaaaggcacacaccccataggatcccctctttgatctcca 39784643  T
Q  115 agttctctctc 125  Q
    || | ||||||    
T  39784642 agatttctctc 39784632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 357
Target Start/End: Complemental strand, 3439144 - 3439088
Alignment:
Q  301 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  3439144 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaatctcaaca 3439088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 4456573 - 4456624
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  4456573 tgaaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaa 4456624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 6311890 - 6311937
Alignment:
Q  312 gatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 359  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  6311890 gatttctctgttcttccagaccacaaatttgaagccaataacaacagt 6311937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 7289471 - 7289424
Alignment:
Q  313 atttctctgttcttccagaccacaaatttgaagccaatatcaacagta 360  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7289471 atttctctgttcttccagaccacaaatttgaagtcaatatcaacagta 7289424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 2627373 - 2627327
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  2627373 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 2627327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 2627483 - 2627381
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||| |||||||||||  | ||||||  |||||||||   |  |||||||||||||    
T  2627483 acttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccatgcaaaccagctcacggaatcacgaaatcgtgtcac 2627384  T
Q  312 gat 314  Q
    |||    
T  2627383 gat 2627381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 361
Target Start/End: Original strand, 7412894 - 7412956
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag-ccaatatcaacagtat 361  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||    
T  7412894 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtcaaatttcaacagtat 7412956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 26288462 - 26288504
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26288462 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26288504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 26301719 - 26301761
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26301719 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26301761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 26313713 - 26313755
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26313713 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26313755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 15290200 - 15290143
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  15290200 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 15290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 15470569 - 15470512
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  15470569 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 15470512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 26288121 - 26288226
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||| ||||||||||||||||||| |||||||  ||||| ||||||||| |||||||    |||||| ||||||  ||||||| |||||||||     
T  26288121 acccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctct 26288220  T
Q  127 aagctc 132  Q
    ||||||    
T  26288221 aagctc 26288226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 26288352 - 26288433
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 293  Q
    |||||||||||||||||   ||| |||||||||||||||||||| ||| |||||||||||  ||||||||  ||||||||||    
T  26288352 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggc 26288433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 26301378 - 26301483
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||| ||||||||||||||||||| |||||||  ||||| ||||||||| |||||||    |||||| ||||||  ||||||| |||||||||     
T  26301378 acccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctct 26301477  T
Q  127 aagctc 132  Q
    ||||||    
T  26301478 aagctc 26301483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 26301609 - 26301690
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 293  Q
    |||||||||||||||||   ||| |||||||||||||||||||| ||| |||||||||||  ||||||||  ||||||||||    
T  26301609 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggc 26301690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 26313372 - 26313477
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||| ||||||||||||||||||| |||||||  ||||| ||||||||| |||||||    |||||| ||||||  ||||||| |||||||||     
T  26313372 acccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctct 26313471  T
Q  127 aagctc 132  Q
    ||||||    
T  26313472 aagctc 26313477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 26313603 - 26313684
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 293  Q
    |||||||||||||||||   ||| |||||||||||||||||||| ||| |||||||||||  ||||||||  ||||||||||    
T  26313603 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggc 26313684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 42575852 - 42575909
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  42575852 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 42575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 31071095 - 31071035
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaac 88  Q
    |||||||||| |||||||||||||||||||||||||||  ||| | |||||||||||||||    
T  31071095 acccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaac 31071035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 42575723 - 42575802
Alignment:
Q  191 agacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 269  Q
    |||| |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  42575723 agaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttg 42575802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 15290324 - 15290250
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  15290324 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 15290250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 15470693 - 15470619
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  15470693 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 15470619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 31042963 - 31042921
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  31042963 tcgtgtcacgatttctctattcttccagaccacaaatttgaag 31042921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 350
Target Start/End: Complemental strand, 23799151 - 23799099
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    ||||||||||| ||||||||||||||||| || |||||||||||||| |||||    
T  23799151 tgaaatcgtgttacgatttctctgttctttcaaaccacaaatttgaaaccaat 23799099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 7412569 - 7412629
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| |||||||||||  ||||||||||||||  ||||| |||||||||||||||||    
T  7412569 acccaaggtgtttacaatgttt--cccaacccaagagatcctctctacaaagacactcaaccc 7412629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 35745921 - 35745971
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  35745921 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 35745971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 19175282 - 19175233
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||| |||||||| |||||||||||| ||| |||||||||||||||    
T  19175282 aaatcgtgacacgatttttctgttcttccaaaccgcaaatttgaagccaa 19175233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 4696476 - 4696416
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  4696476 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 4696416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 10684182 - 10684116
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  10684182 tatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 10684116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 35745558 - 35745624
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  35745558 tatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 35745624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 7289666 - 7289629
Alignment:
Q  232 aatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  7289666 aatcgtgccacgatttcccaagatcgtgtcacgatttg 7289629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 7412787 - 7412868
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 293  Q
    ||||||| |||||||||   ||||||||||||||||| ||| || || |||||||||| |  ||||||||  ||||||||||    
T  7412787 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtaccacgatttgacaccctgcaaaccagctcacggc 7412868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 23799441 - 23799384
Alignment:
Q  31 caaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    ||||||| ||||||||||   ||||||||||||||  ||||| |||||||||||||||||    
T  23799441 caaggtgtttacaatgttc--cccaacccaagagatcctctctacaaagacactcaaccc 23799384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 143; Significance: 7e-75; HSPs: 104)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 160 - 357
Target Start/End: Original strand, 43592656 - 43592854
Alignment:
Q  160 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 259  Q
    ||||||||||||| ||   | ||| ||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43592656 atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 43592755  T
Q  260 ccacgatttggcgtcctgcaaagtagctcacgg-ccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43592756 ccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 43592854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 43592444 - 43592587
Alignment:
Q  13 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43592444 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 43592543  T
Q  113 caagttctctctcaaagctcatacaagctctcttaagttctccc 156  Q
    ||||||||||||| |||||||| |||||||||||||||||||||    
T  43592544 caagttctctctctaagctcattcaagctctcttaagttctccc 43592587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 43598889 - 43599032
Alignment:
Q  13 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43598889 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 43598988  T
Q  113 caagttctctctcaaagctcatacaagctctcttaagttctccc 156  Q
    ||||||||||||| |||||||| |||||||||||||||||||||    
T  43598989 caagttctctctctaagctcattcaagctctcttaagttctccc 43599032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 43604381 - 43604524
Alignment:
Q  13 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43604381 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 43604480  T
Q  113 caagttctctctcaaagctcatacaagctctcttaagttctccc 156  Q
    ||||||||||||| |||||||| |||||||||||||||||||||    
T  43604481 caagttctctctctaagctcattcaagctctcttaagttctccc 43604524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 43609873 - 43610016
Alignment:
Q  13 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43609873 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 43609972  T
Q  113 caagttctctctcaaagctcatacaagctctcttaagttctccc 156  Q
    ||||||||||||| |||||||| |||||||||||||||||||||    
T  43609973 caagttctctctctaagctcattcaagctctcttaagttctccc 43610016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 196 - 357
Target Start/End: Original strand, 31180669 - 31180830
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |      
T  31180669 agtccttatcagtgatacttaacgagaaagtctctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgacac 31180768  T
Q  296 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31180769 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 31180830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 27445135 - 27445273
Alignment:
Q  13 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27445135 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 27445234  T
Q  113 caagttctctctcaaagctcatacaagctctcttaagtt 151  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  27445235 caagttctctctctaagctcattcaagctctcttaagtt 27445273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 27449979 - 27450117
Alignment:
Q  13 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27449979 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 27450078  T
Q  113 caagttctctctcaaagctcatacaagctctcttaagtt 151  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  27450079 caagttctctctctaagctcattcaagctctcttaagtt 27450117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 15044852 - 15044992
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcc 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15044852 tatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcc 15044951  T
Q  114 aagttctctct-caaagctcatacaagctctcttaagttct 153  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  15044952 aagttctctctacaaagctcatacaagctctcttaagttct 15044992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 13 - 143
Target Start/End: Complemental strand, 1457082 - 1456952
Alignment:
Q  13 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1457082 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 1456983  T
Q  113 caagttctctctcaaagctcatacaagctct 143  Q
    ||||||||||||| |||||| | ||||||||    
T  1456982 caagttctctctctaagctcttccaagctct 1456952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 160 - 314
Target Start/End: Original strand, 27445350 - 27445504
Alignment:
Q  160 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 259  Q
    ||||||||||||| ||   | ||| ||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27445350 atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 27445449  T
Q  260 ccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 314  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  27445450 ccacgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgat 27445504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 160 - 357
Target Start/End: Original strand, 27450193 - 27450409
Alignment:
Q  160 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 259  Q
    ||||||||||||| ||   | ||| ||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27450193 atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 27450292  T
Q  260 ccacgatttggcgtcctgcaaagtagctcacggccacttgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatt 340  Q
    |||||||||||||||||||||| |||||||||||| ||||||||                   |||||||||||||||||||||||||||||||||||||    
T  27450293 ccacgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 27450392  T
Q  341 tgaagccaatatcaaca 357  Q
    |||||||||||||||||    
T  27450393 tgaagccaatatcaaca 27450409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 1456861 - 1456700
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    |||| ||| ||||||||||| || | | ||| ||||| ||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  1456861 tcccaagaccgtgtcacgatttgcatctgacccaaggtagacaagtccttatcagggatacttaacaagcaagtttctgaatcgtgtcacgatttcccaa 1456762  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 314  Q
    ||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  1456761 gatcgtgccacgatttggcgtcctgtaaactagctcacggccccttgaaatcgtgtcacgat 1456700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 198 - 362
Target Start/End: Complemental strand, 29402728 - 29402545
Alignment:
Q  198 tccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccact 297  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  29402728 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcatggccact 29402629  T
Q  298 tgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagtatg 362  Q
    ||||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29402628 tgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaatatg 29402545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 153 - 357
Target Start/End: Original strand, 15045057 - 15045279
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||||| | |||  ||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15045057 tccctagatcgtgtcacgatctgcaacggaccccaggttgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaa 15045156  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccact-------tg-----------aaatcgtgtcacgatttctctgttcttccagacca 334  Q
    ||||||||||||||||||||||||||||| | |||||||||  ||       ||           |||||||||||||||||||||||||||||| || |    
T  15045157 gatcgtgccacgatttggcgtcctgcaaactggctcacggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccaaacta 15045256  T
Q  335 caaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||||||||    
T  15045257 caaatttgaagccaatatcaaca 15045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 160 - 357
Target Start/End: Original strand, 43599101 - 43599318
Alignment:
Q  160 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 259  Q
    ||||||||||||| ||   | ||| ||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43599101 atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 43599200  T
Q  260 ccacgatttggcgtcctgcaaagtagctcacgg-ccacttg-------------------aaatcgtgtcacgatttctctgttcttccagaccacaaat 339  Q
    |||||||||||||||||||||| |||||||||| || ||||                   ||||||||||||||||||||||||||||||||||||||||    
T  43599201 ccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 43599300  T
Q  340 ttgaagccaatatcaaca 357  Q
    ||||||||||||||||||    
T  43599301 ttgaagccaatatcaaca 43599318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 160 - 357
Target Start/End: Original strand, 43604593 - 43604810
Alignment:
Q  160 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 259  Q
    ||||||||||||| ||   | ||| ||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43604593 atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 43604692  T
Q  260 ccacgatttggcgtcctgcaaagtagctcacgg-ccacttg-------------------aaatcgtgtcacgatttctctgttcttccagaccacaaat 339  Q
    |||||||||||||||||||||| |||||||||| || ||||                   ||||||||||||||||||||||||||||||||||||||||    
T  43604693 ccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 43604792  T
Q  340 ttgaagccaatatcaaca 357  Q
    ||||||||||||||||||    
T  43604793 ttgaagccaatatcaaca 43604810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 160 - 357
Target Start/End: Original strand, 43610085 - 43610302
Alignment:
Q  160 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 259  Q
    ||||||||||||| ||   | ||| ||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43610085 atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 43610184  T
Q  260 ccacgatttggcgtcctgcaaagtagctcacgg-ccacttg-------------------aaatcgtgtcacgatttctctgttcttccagaccacaaat 339  Q
    |||||||||||||||||||||| |||||||||| || ||||                   ||||||||||||||||||||||||||||||||||||||||    
T  43610185 ccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 43610284  T
Q  340 ttgaagccaatatcaaca 357  Q
    ||||||||||||||||||    
T  43610285 ttgaagccaatatcaaca 43610302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 31180447 - 31180551
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctcaa 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |    
T  31180447 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaagttctctctcta 31180546  T
Q  128 agctc 132  Q
    |||||    
T  31180547 agctc 31180551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 30631640 - 30631734
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctct 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30631640 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgttatccaagttctct 30631734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 196 - 359
Target Start/End: Original strand, 30631768 - 30631950
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| | |||||||||      
T  30631768 agtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaaactggctcacggcac 30631867  T
Q  296 cttg-------------------aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 359  Q
    || |                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30631868 ctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 30631950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 33768548 - 33768676
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  33768548 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 33768647  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  33768648 gatcgtgccacgattttgcttccagcaaa 33768676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 33791680 - 33791808
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  33791680 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 33791779  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  33791780 gatcgtgccacgattttgcttccagcaaa 33791808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 2785739 - 2785867
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||  | | |||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  2785739 tccctagatcgtgtcacgatctgcaacgctccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 2785838  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  2785839 gatcgtgccacgattttgcttccagcaaa 2785867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 24136080 - 24136196
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||     
T  24136080 acccaaggtgattacaatgtttttcccaacccaagagacactttctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 24136179  T
Q  127 aagctcatacaagctct 143  Q
     ||||| | ||||||||    
T  24136180 tagctcttccaagctct 24136196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 28807299 - 28807171
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| | |||||||||| ||||||||||||||||||||    
T  28807299 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaa 28807200  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| ||  ||||||||    
T  28807199 gatcgtgccacgattttgcaccctgcaaa 28807171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 153 - 269
Target Start/End: Complemental strand, 37561170 - 37561054
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    |||||||||| |||||||||||| ||||| | | |||   || |||||||| ||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  37561170 tccctagatcatgtcacgatctgcaacggtccccaggttaaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaa 37561071  T
Q  253 gatcgtgccacgatttg 269  Q
    |||||||||||||||||    
T  37561070 gatcgtgccacgatttg 37561054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 31396712 - 31396585
Alignment:
Q  154 ccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 253  Q
    |||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| || ||||||| | ||||| ||||||||||||||||||||||||||    
T  31396712 ccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaaccaacaagtgtctgaatcgtgtcacgatttcccaag 31396613  T
Q  254 atcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||| |||||||| || ||| |||||    
T  31396612 atcgtggcacgattttgcttccagcaaa 31396585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 31401569 - 31401442
Alignment:
Q  154 ccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 253  Q
    |||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| || ||||||  |||||||||||||||| |||||||||||||||||    
T  31401569 ccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaagcagcaagtttctgaatcatgtcacgatttcccaag 31401470  T
Q  254 atcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||| |||||||| || ||| |||||    
T  31401469 atcgtggcacgattttgcttccagcaaa 31401442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 35387893 - 35388012
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| || ||||||     
T  35387893 acccaaggtgattacaatgttttttccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttttctctct 35387992  T
Q  127 aagctcatacaagctctctt 146  Q
    |||||| | |||||||||||    
T  35387993 aagctcttccaagctctctt 35388012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 196 - 314
Target Start/End: Original strand, 24136303 - 24136421
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  ||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  |||||||| |||||||||||      
T  24136303 agtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcat 24136402  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    |  ||||| ||||||||||    
T  24136403 cacgaaattgtgtcacgat 24136421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 1456695 - 1456638
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1456695 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 1456638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 27445509 - 27445566
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27445509 aaatcgtgtcacgatttctctgttcttctagaccacaaatttgaagccaatatcaaca 27445566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 269
Target Start/End: Complemental strand, 37556348 - 37556232
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| |    ||   || |||||||| ||| |||||||||| |||||||||||  |||||||||| |||||||||    
T  37556348 tccctagatcgtgtcacgatctgcaacggtcctctggttaaccagtccttatcagagatacttaaccagcaagtttctagatcgtgtcacaatttcccaa 37556249  T
Q  253 gatcgtgccacgatttg 269  Q
    |||||||||||||||||    
T  37556248 gatcgtgccacgatttg 37556232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 18442068 - 18442170
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   ||||||||||||||||||||  |||||| |||||||||||  ||||||||  ||||||||||  | ||||||||||||||    
T  18442068 acttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcatgaaatcgtgtcac 18442167  T
Q  312 gat 314  Q
    |||    
T  18442168 gat 18442170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 26177631 - 26177529
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   |||||||||||||||||||| ||||||| |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  26177631 acttaacgagcaagtttgcaaatcgtgtcacgatttcccatgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 26177532  T
Q  312 gat 314  Q
    |||    
T  26177531 gat 26177529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 38219629 - 38219734
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||| |||||||||||||||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  38219629 acccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 38219728  T
Q  127 aagctc 132  Q
    ||||||    
T  38219729 aagctc 38219734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 14520794 - 14520846
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14520794 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 14520846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 9789644 - 9789746
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   ||||||||||||||||||||  |||||| |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  9789644 acttaacgagcaagttttcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 9789743  T
Q  312 gat 314  Q
    |||    
T  9789744 gat 9789746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 10592901 - 10592843
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 358  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  10592901 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacag 10592843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 16407696 - 16407650
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  16407696 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 16407650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 314
Target Start/End: Original strand, 22536672 - 22536790
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||   |||||||||||||||||||  || |||||||||||| ||  |||||||  |||||||||||      
T  22536672 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaattgtgccacgattttgcaccctgcaacctagctcacggcac 22536771  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    |  ||||||||||||||||    
T  22536772 cccgaaatcgtgtcacgat 22536790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 25077886 - 25077813
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||    
T  25077886 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttg 25077813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 25135855 - 25135782
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||    
T  25135855 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttg 25135782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 37556182 - 37556133
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37556182 aaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaa 37556133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 37561004 - 37560955
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37561004 aaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaa 37560955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 357
Target Start/End: Original strand, 22536796 - 22536852
Alignment:
Q  301 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  22536796 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 22536852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 28807493 - 28807429
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaag 79  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| |||| ||||||||| |||||    
T  28807493 tatgaacccaaaatcccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaag 28807429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 29720131 - 29720028
Alignment:
Q  212 acttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtca 310  Q
    ||||||||||||||||| |  ||||||||||||||||||||  |||||| |||||||||||  |||||| | |||||||||||  |  ||||||||||||    
T  29720131 acttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcaccacgaaatcgtgtca 29720032  T
Q  311 cgat 314  Q
    ||||    
T  29720031 cgat 29720028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 357
Target Start/End: Original strand, 43625605 - 43625648
Alignment:
Q  314 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  43625605 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 43625648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 352
Target Start/End: Complemental strand, 12083710 - 12083656
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 352  Q
    |||||||||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  12083710 tgaaatcgtgtcacgatttctctgttcttccaaaccataaatttaaagccaatat 12083656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 15465070 - 15465116
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  15465070 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 15465116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 16407806 - 16407704
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   ||||||||||||||| | |||||||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  16407806 acttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 16407707  T
Q  312 gat 314  Q
    |||    
T  16407706 gat 16407704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 16409132 - 16409086
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  16409132 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 16409086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 26177521 - 26177475
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  26177521 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 26177475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 25077763 - 25077718
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  25077763 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 25077718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 25135732 - 25135687
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  25135732 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 25135687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 40379735 - 40379678
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  40379735 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 40379678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 11916504 - 11916453
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||| |||||||||||||||||||||| || |||||||||||||||||||    
T  11916504 tgaaattgtgtcacgatttctctgttctttcaaaccacaaatttgaagccaa 11916453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 24136429 - 24136484
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatatcaaca 357  Q
    |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||    
T  24136429 tcgtgtcacgatttctgtgttcttccagaccacaaatttgaaaccaaatatcaaca 24136484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 36931898 - 36931855
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 346  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  36931898 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagc 36931855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 9789754 - 9789796
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  9789754 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 9789796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 10593023 - 10592906
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | ||||||||||||||| ||  |||||||  || ||||||| ||    
T  10593023 agtccttatcacggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctatctcacgg-ca 10592925  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    |  | ||||||||||||||    
T  10592924 cccggaatcgtgtcacgat 10592906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 18442178 - 18442220
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  18442178 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 18442220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 26170522 - 26170420
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   |||  ||||||||||||||| ||||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  26170522 acttaacgagcaagtttgcaaattatgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 26170423  T
Q  312 gat 314  Q
    |||    
T  26170422 gat 26170420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 28807133 - 28807083
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  28807133 aaatcgtgacacgattcctctgttcttccagaccataaatttgaagccaat 28807083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 29720020 - 29719978
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  29720020 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 29719978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 29722207 - 29722165
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  29722207 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 29722165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 29752335 - 29752377
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  29752335 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 29752377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 16544051 - 16543994
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  16544051 aaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 16543994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 16546273 - 16546216
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  16546273 aaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 16546216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 345
Target Start/End: Original strand, 35388196 - 35388233
Alignment:
Q  308 tcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35388196 tcacgatttctctgttcttccagaccacaaatttgaag 35388233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 38219865 - 38219946
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 293  Q
    ||||||| |||||||||   ||||||||||| |||||||||||||||| |||||||||||  ||| ||||  ||||||||||    
T  38219865 acttaacaagcaagtttgaaaatcgtgtcacaatttcccaagatcgtgtcacgatttggcaccctacaaaccagctcacggc 38219946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 40381946 - 40381889
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||| ||||||||| |||||||| |||||||||||||||||| |||| ||||||    
T  40381946 aaatcgtggcacgatttccctgttctttcagaccacaaatttgaagacaatctcaaca 40381889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 9352864 - 9352816
Alignment:
Q  301 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||| |||||||||||||||||||| || |||||||||||||||||||    
T  9352864 aatcgcgtcacgatttctctgttctttcaaaccacaaatttgaagccaa 9352816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 24553395 - 24553307
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 118  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||||| |  ||| |||||||||  |||||||||    
T  24553395 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaacccttaagttacctcctttgtaatccaagtt 24553307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 29722318 - 29722215
Alignment:
Q  212 acttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtca 310  Q
    ||||||||||||||||| |  ||||||||||||||||||||  |||||| |||||||||||  | |||| | |||||||| ||  |  ||||||||||||    
T  29722318 acttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccatgcagactagctcacagcaccacgaaatcgtgtca 29722219  T
Q  311 cgat 314  Q
    ||||    
T  29722218 cgat 29722215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 306 - 345
Target Start/End: Original strand, 29751672 - 29751711
Alignment:
Q  306 tgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  29751672 tgtcacgatttccctgttcttccagaccacaaatttgaag 29751711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 2785905 - 2785955
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  2785905 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 2785955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 26170412 - 26170366
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  26170412 tcgtgtcacgatttccctgttcttccataccataaatttgaagccaa 26170366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 31396547 - 31396497
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  31396547 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 31396497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 33768714 - 33768764
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  33768714 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33768764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 33791846 - 33791896
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  33791846 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33791896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 37556541 - 37556432
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||| |||| |||||| || |||||  || || ||||| || ||||  ||||| | ||||    
T  37556541 tatgaacccaaaatcccaaggtgattacaatg-ttttcccaacctaagaaacactcacatcaaaggaacacaccccataggatcccctctttgatctcca 37556443  T
Q  115 agttctctctc 125  Q
    |||| ||||||    
T  37556442 agttttctctc 37556432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 37561363 - 37561254
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||| |||| |||||| || |||||  || || ||||| || ||||  ||||| | ||||    
T  37561363 tatgaacccaaaatcccaaggtgattacaatg-ttttcccaacctaagaaacactcacatcaaaggaacacaccccataggatcccctctttgatctcca 37561265  T
Q  115 agttctctctc 125  Q
    |||| ||||||    
T  37561264 agttttctctc 37561254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 9352972 - 9352891
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 293  Q
    ||||||| |||||||||   ||||||||||||||||| ||  |||||||||||||||| |  ||||||||  ||||||||||    
T  9352972 acttaaccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaaccagctcacggc 9352891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 2785542 - 2785608
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  2785542 tatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 2785608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 16409242 - 16409183
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc 271  Q
    |||||||||||||||||   ||||||||||||||| | |||||||||| ||| |||||||    
T  16409242 acttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacaatttggc 16409183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 29751564 - 29751615
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgattt 247  Q
    |||||||| ||  |||||||||||||||||||||  ||||||||||||||||    
T  29751564 agtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgattt 29751615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 31396909 - 31396843
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  31396909 tatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 31396843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 31401766 - 31401700
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  31401766 tatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 31401700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 33791483 - 33791549
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  33791483 tatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33791549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 36932216 - 36932128
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 118  Q
    |||||||||| |||||||||||  ||||||||||||||   || | | |||||||||||||||    |||||||||||||| |||||||||    
T  36932216 acccaaggtgtttacaatgttt--cccaacccaagagatcatcactataaagacactcaaccctaaagttccctcctttgcaatccaagtt 36932128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 11181700 - 11181641
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 89  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||||    
T  11181700 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaacc 11181641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 31401404 - 31401354
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||| ||||||| |||| |||| ||| ||||||||||||||||||||    
T  31401404 aaatcgtgacacgattcctctattctcccaaaccacaaatttgaagccaat 31401354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 7160770 - 7160712
Alignment:
Q  30 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    ||||||||||||||||||||  ||||| ||||||||  ||| | |||||||||||||||||    
T  7160770 ccaaggtgattacaatgttt--cccaatccaagagaacctcactacaaagacactcaaccc 7160712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 14520461 - 14520519
Alignment:
Q  30 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  14520461 ccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 14520519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 16544174 - 16544105
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 265  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||    
T  16544174 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 16544105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 16546396 - 16546327
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 265  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||    
T  16546396 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 16546327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 28832486 - 28832544
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaac 88  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||    
T  28832486 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaac 28832544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 33768365 - 33768417
Alignment:
Q  29 cccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  33768365 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33768417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 40379858 - 40379789
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 265  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||    
T  40379858 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 40379789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 40382069 - 40382000
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 265  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||    
T  40382069 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 40382000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #104
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 29752267 - 29752327
Alignment:
Q  254 atcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 314  Q
    ||||||||||||||||||  |||||||  |||||||||||  |  ||||||||||||||||    
T  29752267 atcgtgccacgatttggcaccctgcaacctagctcacggcagcacgaaatcgtgtcacgat 29752327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 7e-75; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 153 - 358
Target Start/End: Complemental strand, 9224122 - 9223898
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9224122 tccctagatcgtgtcacgatctgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 9224023  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtca-------------------cgatttctctgttcttccagacc 333  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||                   |||||||||||||||||||||||    
T  9224022 gatcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagacc 9223923  T
Q  334 acaaatttgaagccaatatcaacag 358  Q
    |||||||||||||||||||||||||    
T  9223922 acaaatttgaagccaatatcaacag 9223898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 9228909 - 9228748
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9228909 tccctagatcgtgtcacgatctgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 9228810  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 314  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  9228809 gatcgtgccacgatttggcgtcctgcaaacgagctcacggccacttgaaatcgtgtcacgat 9228748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 196 - 362
Target Start/End: Original strand, 29761078 - 29761244
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  29761078 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 29761177  T
Q  296 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagtatg 362  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  29761178 ctcgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcaaatatcaacaatatg 29761244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 155 - 314
Target Start/End: Complemental strand, 18712476 - 18712317
Alignment:
Q  155 cctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaga 254  Q
    ||||||| ||||||||||||  ||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18712476 cctagattgtgtcacgatcttcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaga 18712377  T
Q  255 tcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 314  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18712376 tcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgat 18712317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 51520622 - 51520759
Alignment:
Q  13 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  51520622 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctccttttctatc 51520721  T
Q  113 caagttctctctcaaagctcatacaagctctcttaagt 150  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  51520722 caagttctctctctaagctcattcaagctctcttaagt 51520759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 9224325 - 9224191
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9224325 tatgaaccctaaaacccaaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 9224226  T
Q  115 agttctctctcaaagctcatacaagctctcttaag 149  Q
    ||||||||||| |||||||||||||||||||||||    
T  9224225 agttctctctctaagctcatacaagctctcttaag 9224191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 9229112 - 9228978
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9229112 tatgaaccctaaaacccaaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 9229013  T
Q  115 agttctctctcaaagctcatacaagctctcttaag 149  Q
    ||||||||||| |||||||||||||||||||||||    
T  9229012 agttctctctctaagctcatacaagctctcttaag 9228978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 18712677 - 18712567
Alignment:
Q  22 cctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctc 121  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18712677 cctaaaacccaaggtgataacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctc 18712578  T
Q  122 tctcaaagctc 132  Q
    ||| |||||||    
T  18712577 tctaaaagctc 18712567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 196 - 357
Target Start/End: Original strand, 51520870 - 51521050
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  51520870 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccc 51520969  T
Q  296 cttgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51520970 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 51521050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 153 - 357
Target Start/End: Complemental strand, 56141735 - 56141511
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    |||| ||||||||||||||| || | | ||| ||||| |||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  56141735 tcccaagatcgtgtcacgatttgcatctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 56141636  T
Q  253 gatcgtgccacga-tttggcgtcctgcaaagtagctcacggccact--------tg-----------aaatcgtgtcacgatttctctgttcttccagac 332  Q
    ||||||||||||| |||||||||||||||| ||||||||| || ||        ||           |||||||||||||||||||||||||||||||||    
T  56141635 gatcgtgccacgattttggcgtcctgcaaactagctcacgacccctccaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagac 56141536  T
Q  333 cacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||||||||||    
T  56141535 cacaaatttgaagccaatatcaaca 56141511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 196 - 360
Target Start/End: Original strand, 24742397 - 24742580
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  24742397 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 24742496  T
Q  296 cttg-------------------aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagta 360  Q
    || |                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24742497 ctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagta 24742580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 153 - 314
Target Start/End: Original strand, 5733023 - 5733185
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  5733023 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 5733122  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagc-tcacggccacttgaaatcgtgtcacgat 314  Q
    ||||||| ||||||||||||||||||||| | || |||||||  |  ||||||||||||||||    
T  5733123 gatcgtgtcacgatttggcgtcctgcaaacttgcttcacggcaccacgaaatcgtgtcacgat 5733185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 153 - 357
Target Start/End: Original strand, 3814383 - 3814605
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacgga-ctcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttccca 251  Q
    |||||||||| |||||||||||| |||||  |||| ||  ||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  3814383 tccctagatcttgtcacgatctgcaacggttctca-ggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttccca 3814481  T
Q  252 agatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaat-------------------cgtgtcacgatttctctgttcttccagac 332  Q
    | |||||| |||||||||||||| |||||| | ||| |||| ||||||||||                   |||||||||||||||||||||||||||||    
T  3814482 a-atcgtgacacgatttggcgtcttgcaaacttgcttacggtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagac 3814580  T
Q  333 cacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||||||||||    
T  3814581 cacaaatttgaagccaatatcaaca 3814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 24742174 - 24742291
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||     
T  24742174 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 24742273  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  24742274 aagctcttccaagctctc 24742291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 153 - 320
Target Start/End: Complemental strand, 45357021 - 45356854
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| |||||   | |||  ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  45357021 tccctagatcgtgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 45356922  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa-gtagctcacggccacttgaaatcgtgtcacgatttctct 320  Q
    |||||||||||||||| || ||| |||||  | |||||||| ||  | |||||||||||||| ||||||    
T  45356921 gatcgtgccacgattttgcatccagcaaacttggctcacgg-catctcaaatcgtgtcacganttctct 45356854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 45347540 - 45347412
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| |||||   | |||  ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  45347540 tccctagatcgtgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 45347441  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  45347440 gatcgtgccacgattttgcatccagcaaa 45347412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 3814189 - 3814299
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| || ||||| || ||||||||||| | ||||    
T  3814189 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaagacacacaccccataggatccctcctttgatgtcca 3814288  T
Q  115 agttctctctc 125  Q
    |||| ||||||    
T  3814289 agttttctctc 3814299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 18856086 - 18856214
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    |||||||||| |||||||||||| |||||   | |||  ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  18856086 tccctagatcatgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 18856185  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||| ||||||||||| || ||| |||||    
T  18856186 gatcttgccacgattttgcatccagcaaa 18856214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 29760874 - 29760965
Alignment:
Q  28 acccaaggtgattacaatgtttt-tcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 118  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  |||||||||    
T  29760874 acccaaggtgattacaatgttttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtt 29760965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 9228743 - 9228686
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9228743 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 9228686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 18856252 - 18856309
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18856252 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 18856309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 18860464 - 18860521
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18860464 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 18860521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 45347735 - 45347658
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat 92  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| || |||||    
T  45347735 tatgaaccctaaaccccaaggtgattacaatgtttttcccaacctaagagacactctcatcaaaggcacacaccccat 45347658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 352
Target Start/End: Complemental strand, 16628405 - 16628351
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 352  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16628405 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 16628351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 352
Target Start/End: Complemental strand, 38151970 - 38151916
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 352  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38151970 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 38151916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 5733190 - 5733247
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  5733190 aaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatatcaaca 5733247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 7122447 - 7122374
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  7122447 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttg 7122374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 7124669 - 7124596
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  7124669 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttg 7124596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 352
Target Start/End: Original strand, 3778116 - 3778167
Alignment:
Q  301 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 352  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3778116 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 3778167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 8393039 - 8392980
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 359  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  8393039 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacagt 8392980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 5143809 - 5143859
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5143809 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5143859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 5732834 - 5732940
Alignment:
Q  19 aaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 118  Q
    |||||| || |||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| || ||||| || ||||  ||||| | ||||||||    
T  5732834 aacccttaatcccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaaggcacacaccccataggatcccctctttgatctccaagtt 5732933  T
Q  119 ctctctc 125  Q
     ||||||    
T  5732934 ttctctc 5732940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 8393167 - 8393089
Alignment:
Q  191 agacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    |||| |||||||| ||  ||||||||||||||||||||||| ||||||||||||||| || | ||||||||||||||||    
T  8393167 agaccagtccttatcacggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttg 8393089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 8689094 - 8689044
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8689094 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 8689044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 13992714 - 13992816
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||| |||||||||||  ||||||||  |||||||| |  |  |||||||||||||    
T  13992714 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacgacatcacgaaatcgtgtcac 13992813  T
Q  312 gat 314  Q
    |||    
T  13992814 gat 13992816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 13992824 - 13992870
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  13992824 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 13992870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 352
Target Start/End: Complemental strand, 16622826 - 16622772
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 352  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  16622826 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaatat 16622772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 31495737 - 31495839
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   ||||||||||||||||||||  |||||| |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  31495737 acttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 31495836  T
Q  312 gat 314  Q
    |||    
T  31495837 gat 31495839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 45347374 - 45347324
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45347374 aaatcgtgtcacgatttctttgttcttccagaccacaaatttgaagccaat 45347324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 45357215 - 45357105
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || ||||| || ||||  ||||| | ||||    
T  45357215 tatgaaccctaaaccccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccataggatcccctctttgatctcca 45357116  T
Q  115 agttctctctc 125  Q
    || | ||||||    
T  45357115 agatttctctc 45357105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 8395248 - 8395191
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  8395248 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 8395191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 298 - 351
Target Start/End: Original strand, 10047930 - 10047983
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 351  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  10047930 tgaaatcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaata 10047983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 28468142 - 28468061
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 293  Q
    |||||||||||||||||   |||||||||||||||| ||||||||||| |||||||||||  ||||||||  ||||||||||    
T  28468142 acttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggc 28468061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 28468404 - 28468287
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||| ||||||| |||||||||||||||||||  ||| | ||||||||||| |||||    |||||||||||||  ||||||| |||||||||     
T  28468404 acccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacacttaaccctagagttccctcctttgtaatccaagtttctctctct 28468305  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  28468304 aagctcttccaagctctc 28468287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 350
Target Start/End: Complemental strand, 6742948 - 6742896
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  6742948 tgaaatcgtgtcacgatttctctgttcttccaaaccataaatttgaagccaat 6742896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 5148244 - 5148294
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  5148244 aaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaat 5148294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 5268749 - 5268699
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  5268749 aaatcctgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5268699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 28468032 - 28467986
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  28468032 tcgtgtcacgatttctctgttcttccataccacaaatttgaagccaa 28467986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 54867743 - 54867795
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  54867743 tgaaatcgtgtcacgacttctctattcttccaaaccacaaatttgaagccaat 54867795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 7122324 - 7122266
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 358  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||  |||||||    
T  7122324 aaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaactcaacag 7122266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 298 - 351
Target Start/End: Original strand, 9194162 - 9194216
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagccaata 351  Q
    |||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  9194162 tgaaatcgtgtcacaatttctctgttcttccaaaaccacaaatttgaagccaata 9194216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 31495847 - 31495889
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  31495847 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 31495889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 31985182 - 31985136
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||    
T  31985182 tcgtgtcacgatttctctgttctttcagatcacaaatttgaagccaa 31985136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 5135706 - 5135649
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||    
T  5135706 aaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaatctcaaca 5135649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 5135817 - 5135756
Alignment:
Q  209 gatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 269  Q
    ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  5135817 gatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttg 5135756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 5137932 - 5137875
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||    
T  5137932 aaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaatctcaaca 5137875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 5138043 - 5137982
Alignment:
Q  209 gatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 269  Q
    ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  5138043 gatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttg 5137982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 7124546 - 7124501
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  7124546 aaatcgtgtcacgatttccctgttcttccacaccacaaatttgaag 7124501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 8395371 - 8395298
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||| || |||||||||||| || | ||||||| ||||||||    
T  8395371 agtccttatcacggatacttaacgagcaagtttctggattgtgtcacgattttcccaaatcgtgctacgatttg 8395298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 18855892 - 18855956
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || |||||||||||||||||||||||||||||| |||| || |||||| |||||    
T  18855892 tatgaacccacaatcccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaag 18855956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 346
Target Start/End: Complemental strand, 36314763 - 36314715
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 346  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||||||    
T  36314763 tgaaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaagc 36314715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 346
Target Start/End: Complemental strand, 36328972 - 36328924
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 346  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||||||    
T  36328972 tgaaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaagc 36328924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 5112466 - 5112523
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 87  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| ||||||||||||||||    
T  5112466 acccaaggtgtttacaatgttt--cccaacccaagagaacctcacaacaaagacactcaa 5112523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 346
Target Start/End: Complemental strand, 5396223 - 5396176
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 346  Q
    |||||||||| |||||||||||||||||| || ||||||||||||||||    
T  5396223 tgaaatcgtg-cacgatttctctgttctttcaaaccacaaatttgaagc 5396176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 16628740 - 16628655
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaa 115  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    ||| |||||||||| ||||||    
T  16628740 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgcaatccaa 16628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 3777778 - 3777838
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  3777778 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 3777838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 5396539 - 5396479
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  5396539 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 5396479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 16623161 - 16623101
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  16623161 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 16623101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 5269066 - 5269008
Alignment:
Q  30 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  5269066 ccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 5269008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 56141750 - 56141713
Alignment:
Q  232 aatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  56141750 aatcgtgccacgatttcccaagatcgtgtcacgatttg 56141713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 6743283 - 6743226
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 87  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||    
T  6743283 acccaaggtgtttacaatgttt--cccaacccaagagatcctcgctacaaagacactcaa 6743226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 25861898 - 25861841
Alignment:
Q  31 caaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    ||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  25861898 caaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 25861841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 137; Significance: 3e-71; HSPs: 81)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 12397076 - 12397216
Alignment:
Q  13 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12397076 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 12397175  T
Q  113 caagttctctctcaaagctcatacaagctctcttaagttct 153  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  12397176 caagttctctctctaagctcatacaagctctcttaagttct 12397216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 160 - 357
Target Start/End: Original strand, 12406641 - 12406857
Alignment:
Q  160 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 259  Q
    ||||||||||||| || ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12406641 atcgtgtcacgatttgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 12406740  T
Q  260 ccacgatttggcgtcctgcaaagtagctcacggccacttgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatt 340  Q
    ||||||||||||||| |||||| |||||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||    
T  12406741 ccacgatttggcgtcttgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 12406840  T
Q  341 tgaagccaatatcaaca 357  Q
    |||||||||||||||||    
T  12406841 tgaagccaatatcaaca 12406857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 153 - 357
Target Start/End: Original strand, 4873498 - 4873721
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    |||||||||||||||||||| || ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  4873498 tccctagatcgtgtcacgatttgcaacggacccaaggaagacaagtccttatcagtgatacttaacgagcaagtttctgaattgtgtcacgatttcccaa 4873597  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaat-------------------cgtgtcacgatttctctgttcttccagacc 333  Q
    ||||||||||||||||||||||||||||| || || |||||||||||||||                   ||||||||||||||||||||||||||||||    
T  4873598 gatcgtgccacgatttggcgtcctgcaaactatcttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagacc 4873697  T
Q  334 acaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||    
T  4873698 acaaatttgaagccaatatcaaca 4873721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 24024244 - 24024115
Alignment:
Q  16 atgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaa 115  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24024244 atgaaccctaaaacccacggtgattacaatgtttttccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaa 24024145  T
Q  116 gttctctctcaaagctcatacaagctctct 145  Q
    ||||||||||||||||||||||||||||||    
T  24024144 gttctctctcaaagctcatacaagctctct 24024115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 24024042 - 24023881
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24024042 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 24023943  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 314  Q
    ||||||||||||||||||||||||||||| |||||| | |||||||||||||||| ||||||    
T  24023942 gatcgtgccacgatttggcgtcctgcaaactagctctctgccacttgaaatcgtgccacgat 24023881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 31109294 - 31109132
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  31109294 tccctagatcgtgtcacgatctgcaacggccccaaggcagacaagtccttatcagttatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 31109195  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa-gtagctcacggccacttgaaatcgtgtcacgat 314  Q
    |||||||||||||||||||||||||||||  ||||| || | |||||||||||||| ||||||    
T  31109194 gatcgtgccacgatttggcgtcctgcaaacttagcttacaggcacttgaaatcgtgccacgat 31109132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 30 - 153
Target Start/End: Original strand, 4873310 - 4873433
Alignment:
Q  30 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctcaaag 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  4873310 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgttatccaagttctctctctaag 4873409  T
Q  130 ctcatacaagctctcttaagttct 153  Q
    ||| | ||||||||||||||||||    
T  4873410 ctcttccaagctctcttaagttct 4873433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 31109502 - 31109369
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat-tggttccctcctttgctatcc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31109502 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccatatggttccctcctttgctatcc 31109403  T
Q  114 aag-ttctctctc-aaagctcatacaagctctct 145  Q
    ||| || ||||||  |||||||||||||||||||    
T  31109402 aagtttttctctcttaagctcatacaagctctct 31109369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 357
Target Start/End: Original strand, 2058425 - 2058604
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  2058425 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 2058524  T
Q  296 ct-------tg-----------aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||       ||           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2058525 ctcaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 2058604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 2058202 - 2058320
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctcaa 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  |||||||||||||||| |    
T  2058202 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagttctctctcta 2058301  T
Q  128 agctcatacaagctctctt 146  Q
    ||||| | |||||||||||    
T  2058302 agctcttccaagctctctt 2058320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 196 - 357
Target Start/End: Original strand, 21640243 - 21640423
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||      
T  21640243 agtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcac 21640342  T
Q  296 cttgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    || |||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21640343 ctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 21640423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 209 - 314
Target Start/End: Complemental strand, 20357195 - 20357090
Alignment:
Q  209 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgt 308  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  20357195 gatacttaacgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgt 20357096  T
Q  309 cacgat 314  Q
    ||||||    
T  20357095 cacgat 20357090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 20357410 - 20357306
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctcaa 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| | |    
T  20357410 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaagttctctcacta 20357311  T
Q  128 agctc 132  Q
    |||||    
T  20357310 agctc 20357306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 12406496 - 12406585
Alignment:
Q  13 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctc 102  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12406496 aatatgaaccctaaaagccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctc 12406585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 1533307 - 1533190
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||     
T  1533307 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 1533208  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  1533207 aagctcttccaagctctc 1533190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 160 - 314
Target Start/End: Original strand, 12397289 - 12397430
Alignment:
Q  160 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 259  Q
    ||||||||||||| || ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  12397289 atcgtgtcacgatttgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcat- 12397387  T
Q  260 ccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 314  Q
                | |||||||| ||||||||||||||||||||||||||||||||    
T  12397388 ------------ggcctgcaaactagctcacggccacttgaaatcgtgtcacgat 12397430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 24265900 - 24265772
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | | |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  24265900 tccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 24265801  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  24265800 gatcgtgccacgattttgcttccagcaaa 24265772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 24789607 - 24789489
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||      
T  24789607 agtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgccacgatttggcaccctgcaaactagctcacggcac 24789508  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    |  ||||||||||||||||    
T  24789507 cacgaaatcgtgtcacgat 24789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 16880437 - 16880565
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| || ||||||| ||||||||||||||||||||||| |||||||||    
T  16880437 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaa 16880536  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    ||||||| |||||||| || ||| |||||    
T  16880537 gatcgtgacacgattttgcttccagcaaa 16880565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 16885292 - 16885420
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| || ||||||| ||||||||||||||||||||||| |||||||||    
T  16885292 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaa 16885391  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    ||||||| |||||||| || ||| |||||    
T  16885392 gatcgtgacacgattttgcttccagcaaa 16885420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 21811962 - 21811834
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    |||| |||||||| ||| ||||| ||||| ||| |||  ||| |||||||| ||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  21811962 tcccaagatcgtgacacaatctgcaacggtctccaggttgaccagtccttatcagagatacttaactagcaagtttctggatcgtgtcacgatttcccaa 21811863  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| ||  ||||||||    
T  21811862 gatcgtgccacgattttgcaccctgcaaa 21811834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 20357085 - 20357028
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20357085 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 20357028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 21640039 - 21640156
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  21640039 acccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 21640138  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  21640139 aagctcttccaagctctc 21640156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 196 - 268
Target Start/End: Complemental strand, 24261001 - 24260929
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 268  Q
    |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24261001 agtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattt 24260929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 1533084 - 1532966
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  ||||||||||||| |||||||  |||||||||||||||||||||||||||| |||||||||||  |||||||| ||||||| |||      
T  1533084 agtccttatcaaggatacttaacgagtaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcatggcac 1532985  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    ||  ||||| |||||||||    
T  1532984 ctcaaaatcatgtcacgat 1532966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 12397435 - 12397492
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12397435 aaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 12397492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 209 - 314
Target Start/End: Original strand, 21646475 - 21646580
Alignment:
Q  209 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgt 308  Q
    ||||||||||||||||||||   |||||||||||||||| ||||||||||| |||||||||||  ||||||||  ||||||||||  |  ||||||||||    
T  21646475 gatacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgt 21646574  T
Q  309 cacgat 314  Q
    ||||||    
T  21646575 cacgat 21646580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 301 - 357
Target Start/End: Complemental strand, 24023875 - 24023819
Alignment:
Q  301 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24023875 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagctaatatcaaca 24023819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 25767381 - 25767483
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||| |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  25767381 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 25767480  T
Q  312 gat 314  Q
    |||    
T  25767481 gat 25767483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 43504556 - 43504658
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   |||||||||||||||||||| ||||||| |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  43504556 acttaacgagcaagtttgcaaatcgtgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 43504655  T
Q  312 gat 314  Q
    |||    
T  43504656 gat 43504658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 18408993 - 18409110
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||| |||||||||||||||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  ||| ||| |||||||||     
T  18408993 acccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatctaagtttctctctct 18409092  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  18409093 aagctcttccaagctctc 18409110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 18413869 - 18413986
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||| ||||| |||||||||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  18413869 acccaaggtgtttacattgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 18413968  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  18413969 aagctcttccaagctctc 18413986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 18414110 - 18414191
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 293  Q
    ||||||| |||||||||  ||||||||| ||||||||||||||||||| |||||||||||| ||||||||  ||||||||||    
T  18414110 acttaacaagcaagtttgagaatcgtgttacgatttcccaagatcgtgtcacgatttggcgccctgcaaaccagctcacggc 18414191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 31109127 - 31109070
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  31109127 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatttcaaca 31109070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 21646237 - 21646353
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||    ||| |||||||||  ||| ||| |||||||||     
T  21646237 acccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagtttcctcctttgtaatctaagtttctctctct 21646336  T
Q  127 aagctcatacaagctct 143  Q
    |||||| | ||||||||    
T  21646337 aagctcttccaagctct 21646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 21983807 - 21983859
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21983807 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 21983859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 1532939 - 1532884
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1532939 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatatcaaca 1532884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 352
Target Start/End: Original strand, 79953 - 80007
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 352  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  79953 tgaaatcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaatat 80007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 20343680 - 20343562
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| || ||| ||||  |||||||||||      
T  20343680 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcatccggcaacctagctcacggcac 20343581  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    |  ||||||||||||||||    
T  20343580 cccgaaatcgtgtcacgat 20343562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 39730988 - 39730942
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  39730988 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39730942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 48408563 - 48408461
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   ||||||||||||||||| |||||||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  48408563 acttaacgagcaagtttgcaaatcgtgtcacgatttctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 48408464  T
Q  312 gat 314  Q
    |||    
T  48408463 gat 48408461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 1562530 - 1562587
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  1562530 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 1562587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 6592741 - 6592814
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||| ||||||||||||||| || | ||||||||||||||||    
T  6592741 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttg 6592814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 6592864 - 6592921
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  6592864 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 6592921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 6594957 - 6595030
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||| ||||||||||||||| || | ||||||||||||||||    
T  6594957 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttg 6595030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 32060831 - 32060888
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  32060831 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 32060888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 21989471 - 21989522
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  21989471 tgaaatcttgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21989522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 18409234 - 18409336
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    ||||||| |||||||||  |||||||||||||||||| |||||||||| || ||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  18409234 acttaacaagcaagtttgagaatcgtgtcacgatttctcaagatcgtgtcatgatttggcaccctgcaaaccagctcacggcaccacaaaatcgtgtcac 18409333  T
Q  312 gat 314  Q
    |||    
T  18409334 gat 18409336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 18414220 - 18414266
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  18414220 tcgtgtcacgatttctctgttcttccagaccataaatttgaagccaa 18414266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 20343556 - 20343498
Alignment:
Q  301 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 359  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  20343556 aatcgcgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacagt 20343498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 39731098 - 39730996
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   ||||||||||||||| | |||||||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  39731098 acttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 39730999  T
Q  312 gat 314  Q
    |||    
T  39730998 gat 39730996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 48408453 - 48408407
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  48408453 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 48408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 6595080 - 6595137
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||    
T  6595080 aaatcgtgtcacgatttccctgtttttccagaccacaaatttgaagacaatctcaaca 6595137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 21811796 - 21811747
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  21811796 aaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 21811747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 32060708 - 32060781
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||  ||||||||||||||| || | ||||||||||||||||    
T  32060708 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaatcgtgccacgatttg 32060781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 47264209 - 47264258
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  47264209 aaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaa 47264258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 21646590 - 21646634
Alignment:
Q  305 gtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  21646590 gtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21646634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 346
Target Start/End: Original strand, 43504666 - 43504709
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 346  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  43504666 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagc 43504709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 18392723 - 18392781
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 358  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||| |||| |||||||    
T  18392723 aaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaacag 18392781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 18409344 - 18409390
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||    
T  18409344 tcgtgttacgatttctctgttcttccagaacacaaatttgaagccaa 18409390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 2479902 - 2479951
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||| |||||||||||||| || |||||||||||||||||||    
T  2479902 aaatcgtgtcacaatttctctgttcttacaaaccacaaatttgaagccaa 2479951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 44847677 - 44847628
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||||||  | |||||||||||||||||||    
T  44847677 aaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaagccaa 44847628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 350
Target Start/End: Complemental strand, 46515862 - 46515809
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagccaat 350  Q
    ||||||||||||||||||||||||||||||| | |||| |||||||||||||||    
T  46515862 tgaaatcgtgtcacgatttctctgttcttccaaaaccataaatttgaagccaat 46515809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 268
Target Start/End: Original strand, 1562407 - 1562479
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 268  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| |||| |||||| ||||||||    
T  1562407 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaccaaaatcgtgacacgattt 1562479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 24260878 - 24260819
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 359  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||  |||||||    
T  24260878 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattccaacagt 24260819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 19992479 - 19992544
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgttttt-cccaacccaagagacactctcaacaaag 79  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||||| |||| |||||| || |||||    
T  19992479 tatgaacccaaaatcccaaggtgattacaatgtttttccccaacctaagaaacactcacatcaaag 19992544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 21812157 - 21812092
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgttttt-cccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || ||||||||||||||||||||||| ||||||| |||| ||||||||| |||||    
T  21812157 tatgaacccataatcccaaggtgattacaatgtttttccccaacctaagaaacactctcatcaaag 21812092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 357
Target Start/End: Original strand, 18390506 - 18390562
Alignment:
Q  301 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||| ||||||||| ||||||||| | ||||||||||||||| |||| ||||||    
T  18390506 aatcgtggcacgatttccctgttcttctaaaccacaaatttgaagacaatctcaaca 18390562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 49092238 - 49092282
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 344  Q
    |||||||||||| ||||||||||||||||| || |||||||||||    
T  49092238 aaatcgtgtcacaatttctctgttcttccaaactacaaatttgaa 49092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 2479565 - 2479653
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 118  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | | |||||||||||||||    |||||||||||||  |||||||||    
T  2479565 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactataaagacactcaaccctaaagttccctcctttgtaatccaagtt 2479653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 2580619 - 2580706
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 118  Q
    |||||||||| ||||||||||||  |||||||||||||  ||| | |||||||||||||||||    ||| |||||||||| |||||||||    
T  2580619 acccaaggtgtttacaatgtttt--ccaacccaagagaacctcac-acaaagacactcaaccctaaagttacctcctttgcaatccaagtt 2580706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 20284318 - 20284378
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  20284318 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 20284378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 23402881 - 23402821
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  23402881 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 23402821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 24266120 - 24266054
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  24266120 tatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 24266054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 4796536 - 4796477
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 89  Q
    |||||||||| ||||||||||||  |||||||||||||  ||| | ||||||||||||||||    
T  4796536 acccaaggtgtttacaatgtttt--ccaacccaagagatcctcactacaaagacactcaacc 4796477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 46516173 - 46516070
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||| |||||||||||  |||||| |||||||  ||| | |||||||||||||||||    ||| |||||||||  ||||||| |||||||||     
T  46516173 acccaaggtgtttacaatgttt--cccaactcaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 46516076  T
Q  127 aagctc 132  Q
    ||||||    
T  46516075 aagctc 46516070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 18389164 - 18389233
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 265  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||    
T  18389164 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 18389233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 18392600 - 18392669
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 265  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||    
T  18392600 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 18392669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 44847991 - 44847933
Alignment:
Q  30 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  44847991 ccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 44847933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 350
Target Start/End: Complemental strand, 2647230 - 2647179
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    ||||||||||| ||||||||||||||| || | |||| |||||||||||||||    
T  2647230 tgaaatcgtgttacgatttctctgttc-tcaaaaccataaatttgaagccaat 2647179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 21989137 - 21989194
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 87  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||    
T  21989137 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaa 21989194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 2e-69; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 196 - 357
Target Start/End: Complemental strand, 24793827 - 24793666
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  24793827 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 24793728  T
Q  296 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24793727 ctcgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 24793666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 153 - 359
Target Start/End: Original strand, 41398618 - 41398823
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| | ||||| | |||  ||| |||||||| || |||||||||| ||||||||||||||||||||||||||||||||||    
T  41398618 tccctagatcgtgtcacgatctgcagcggaccccaggttgaccagtccttatcaatgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaa 41398717  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 352  Q
    ||||||||||||||||||||||||||||| | |||||||| ||  | ||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  41398718 gatcgtgccacgatttggcgtcctgcaaactggctcacgg-catctcaaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaaat 41398816  T
Q  353 caacagt 359  Q
    |||||||    
T  41398817 caacagt 41398823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 41398402 - 41398542
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgctatcc 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41398402 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttgctatcc 41398501  T
Q  114 aagttctctctc-aaagctcatacaagctctcttaagttct 153  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  41398502 aagttctctctcaaaagctcatacaagctctcttaagttct 41398542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 41390747 - 41390887
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgctatcc 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  41390747 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaatccatttggttccctcctttgctatcc 41390846  T
Q  114 aagttctctctc-aaagctcatacaagctctcttaagttct 153  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  41390847 aagttctctctcaaaagctcatacaagctctcttaagttct 41390887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 153 - 357
Target Start/End: Original strand, 41390963 - 41391185
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| | ||||| | |||  ||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  41390963 tccctagatcgtgtcacgatctgcagcggaccccaggttgaccagtccttatcagtgatacttaatgagcaagtttctgaatcatgtcacgatttcccaa 41391062  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccact-------tg-----------aaatcgtgtcacgatttctctgttcttccagacca 334  Q
    ||||||||||||||||||||||||||||| | |||||||||  ||       ||           |||||||||||||||||||||||||||||||||||    
T  41391063 gatcgtgccacgatttggcgtcctgcaaactggctcacggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagacca 41391162  T
Q  335 caaatttgaagccaatatcaaca 357  Q
    ||||||||||||||| |||||||    
T  41391163 caaatttgaagccaaaatcaaca 41391185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 24787226 - 24787111
Alignment:
Q  29 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctcaaa 128  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||    
T  24787226 cccaaggtgattataatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaagttctctctctaa 24787127  T
Q  129 gctcatacaagctctc 144  Q
    |||| | |||||||||    
T  24787126 gctcttccaagctctc 24787111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 1054737 - 1054609
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| |||||   | |||  ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  1054737 tccctagatcgtgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaa 1054638  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||||||||||||||||    
T  1054637 gatcgtgccacgatttggcgtcctgcaaa 1054609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 39445859 - 39445987
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  39445859 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaacgagcaagtttctggatcgtgtcatgatttcccaa 39445958  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||||||||||||||||    
T  39445959 gatcgtgccacgatttggcgtcctgcaaa 39445987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 196 - 293
Target Start/End: Complemental strand, 24787005 - 24786908
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 293  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24787005 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggc 24786908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 44023600 - 44023472
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  44023600 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 44023501  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  44023500 gatcgtgccacgattttgcatccagcaaa 44023472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 25439622 - 25439494
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||| | | | |||  ||| |||||||| ||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  25439622 tccctagatcgtgtcacgatctgcaacagtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaa 25439523  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || |||||||||    
T  25439522 gatcgtgccacgattttgcatcctgcaaa 25439494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 24202635 - 24202517
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  24202635 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctaaagttccctcctttgtaatccaagtttctctctct 24202536  T
Q  127 aagctcatacaagctctct 145  Q
    |||||| | ||||||||||    
T  24202535 aagctcttccaagctctct 24202517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 25444815 - 25444687
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| | |||||||||| ||||||||||||||||||||    
T  25444815 tccctagatcgtgtcacgatctgcaacggtccctaggttgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaa 25444716  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || |||| ||||    
T  25444715 gatcgtgccacgattttgcatcctacaaa 25444687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 43988172 - 43988044
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    |||||||||||||||||||| || ||||| | | | |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||| ||||    
T  43988172 tccctagatcgtgtcacgatatgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttaccaa 43988073  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    ||||||| |||||||| || ||| |||||    
T  43988072 gatcgtggcacgattttgcttccagcaaa 43988044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 196 - 314
Target Start/End: Original strand, 20622640 - 20622758
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||  ||||||||||||||||||||  |||||| |||||||||||  |||||| | |||||||||||      
T  20622640 agtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcac 20622739  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    |  ||||||||||||||||    
T  20622740 cacgaaatcgtgtcacgat 20622758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 39446025 - 39446082
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39446025 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 39446082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 44023434 - 44023377
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  44023434 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 44023377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 19361077 - 19360975
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  19361077 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 19360978  T
Q  312 gat 314  Q
    |||    
T  19360977 gat 19360975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 1054571 - 1054514
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1054571 aaatcgtgacacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 1054514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 19366174 - 19366057
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||| ||||||| |||||||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  19366174 acccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 19366075  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  19366074 aagctcttccaagctctc 19366057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 13598965 - 13599017
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13598965 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 13599017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 214 - 314
Target Start/End: Complemental strand, 19365931 - 19365831
Alignment:
Q  214 ttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacga 313  Q
    |||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||||    
T  19365931 ttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacga 19365832  T
Q  314 t 314  Q
    |    
T  19365831 t 19365831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 21536172 - 21536121
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21536172 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21536121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 24202306 - 24202260
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  24202306 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 24202260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 25439456 - 25439406
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25439456 aaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25439406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 25439815 - 25439705
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || ||||| || ||||  ||||| | ||||    
T  25439815 tatgaaccctaaatcccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccataggatcccctctttgatctcca 25439716  T
Q  115 agttctctctc 125  Q
    || | ||||||    
T  25439715 agatttctctc 25439705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 25444649 - 25444599
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25444649 aaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25444599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 25445008 - 25444898
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || ||||| || ||||  ||||| | ||||    
T  25445008 tatgaaccctaaatcccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccataggatcccctctttgatctcca 25444909  T
Q  115 agttctctctc 125  Q
    || | ||||||    
T  25444908 agatttctctc 25444898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 51765155 - 51765053
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   ||||||||||||||| | |||||||||| |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  51765155 acttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 51765056  T
Q  312 gat 314  Q
    |||    
T  51765055 gat 51765053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 9036060 - 9036003
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  9036060 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 9036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 44203275 - 44203218
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  44203275 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 44203218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 44203398 - 44203325
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||| ||||||||||||||| || | ||||||||||||||||    
T  44203398 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttg 44203325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 37070332 - 37070384
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  37070332 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaaaccaat 37070384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 298 - 357
Target Start/End: Original strand, 13659838 - 13659897
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  13659838 tgaaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 13659897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 303 - 358
Target Start/End: Complemental strand, 21053594 - 21053539
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 358  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  21053594 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacag 21053539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 1054931 - 1054821
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || ||||| || ||||  ||||| | ||||    
T  1054931 tatgaacccaaaatcccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccataggatcccctctttgatctcca 1054832  T
Q  115 agttctctctc 125  Q
    || | ||||||    
T  1054831 agatttctctc 1054821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 19360967 - 19360921
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  19360967 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 19360921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 39445665 - 39445775
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || ||||| || ||||  ||||| | ||||    
T  39445665 tatgaacccaaaatcccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccataggatcccctctttgatctcca 39445764  T
Q  115 agttctctctc 125  Q
    || | ||||||    
T  39445765 agatttctctc 39445775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 44023793 - 44023683
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || ||||| || ||||  ||||| | ||||    
T  44023793 tatgaacccaaaatcccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccataggatcccctctttgatctcca 44023694  T
Q  115 agttctctctc 125  Q
    || | ||||||    
T  44023693 agatttctctc 44023683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 51765045 - 51764999
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  51765045 tcgtgtcacgatttctctgttcttccagaccacaaatttaaagccaa 51764999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 19358709 - 19358593
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||| |||||||||||| |||||||||| |||  ||| | |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  19358709 acccaaggtgtttacaatgtttt-cccaacccaaaagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 19358611  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  19358610 aagctcttccaagctctc 19358593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 19361298 - 19361182
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||| |||||||||||| ||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  ||| ||| |||||||||     
T  19361298 acccaaggtgtttacaatgtttt-cccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatctaagtttctctctct 19361200  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  19361199 aagctcttccaagctctc 19361182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 301 - 345
Target Start/End: Complemental strand, 13604152 - 13604108
Alignment:
Q  301 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  13604152 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 13604108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 3282271 - 3282322
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  3282271 tgaaatcgtgtcacgatttttctgttcttcctaaccacaaatttgaagccaa 3282322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 9986950 - 9986891
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc 271  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||| |||||||||||    
T  9986950 acttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggc 9986891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 9986840 - 9986798
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  9986840 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 9986798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 19365823 - 19365781
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  19365823 tcgtgtcacgatttctctgttctttcagaccacaaatttgaag 19365781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 20622766 - 20622808
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  20622766 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 20622808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 350
Target Start/End: Complemental strand, 16124240 - 16124188
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| || |||||    
T  16124240 tgaaatcgtatcacgatttctctgttcttccaaaccacaaatttaaaaccaat 16124188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 40282124 - 40282021
Alignment:
Q  212 acttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtca 310  Q
    ||||||||||||||||| |  |||||||||||||||| |||  |||||| |||||||||||  |||||||  |||||||||||  |   |||||||||||    
T  40282124 acttaacgagcaagtttgcacaatcgtgtcacgatttaccacaatcgtgtcacgatttggcaccctgcaacctagctcacggcaccactaaatcgtgtca 40282025  T
Q  311 cgat 314  Q
    ||||    
T  40282024 cgat 40282021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 9036183 - 9036065
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||   |||||||||||||||  ||| || ||| ||||| || ||  |||||||  |||||||||||      
T  9036183 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaacaaaatagtgacacgaatttgcaccctgcaacctagctcacggcac 9036084  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    |  ||||||||||||||||    
T  9036083 cccgaaatcgtgtcacgat 9036065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 26644431 - 26644381
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    ||||||| |||||||| ||||||||||||| ||||||||||| ||||||||    
T  26644431 aaatcgtatcacgattcctctgttcttccaaaccacaaatttaaagccaat 26644381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 40282013 - 40281971
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  40282013 tcgtgtcacgatttccctattcttccagaccacaaatttgaag 40281971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 21053705 - 21053645
Alignment:
Q  212 acttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc 271  Q
    ||||||||||||||||| |  ||||||||||||||||||||  |||||| |||||||||||    
T  21053705 acttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggc 21053645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 13604490 - 13604402
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 118  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||| |||||||||    |||||||||||||  |||||||||    
T  13604490 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagatactcaaccctaaagttccctcctttgtaatccaagtt 13604402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 29652379 - 29652418
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaa 337  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  29652379 tgaaatcgtatcacgatttctctgttcttccaaaccacaa 29652418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 43988380 - 43988314
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  43988380 tatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 43988314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 47098693 - 47098633
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  47098693 acccaaggtgtttacaatgttt--cccaacccaagagaacctcgctacaaagacactcaaccc 47098633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 47102707 - 47102647
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  47102707 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 47102647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 3281936 - 3281995
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 89  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||||    
T  3281936 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacc 3281995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 351
Target Start/End: Complemental strand, 10924860 - 10924807
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 351  Q
    |||||||||||||||||||||||||| ||| |   ||||| |||||||||||||    
T  10924860 tgaaatcgtgtcacgatttctctgtttttcaacttcacaattttgaagccaata 10924807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 37069998 - 37070055
Alignment:
Q  30 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 89  Q
    |||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||||    
T  37069998 ccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacc 37070055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 4e-67; HSPs: 124)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 196 - 357
Target Start/End: Complemental strand, 8738703 - 8738542
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||      
T  8738703 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcacggcac 8738604  T
Q  296 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8738603 cttgaaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 8738542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 196 - 357
Target Start/End: Complemental strand, 9090941 - 9090780
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||      
T  9090941 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcacggcac 9090842  T
Q  296 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9090841 cttgaaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 9090780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 13 - 143
Target Start/End: Complemental strand, 22173115 - 22172985
Alignment:
Q  13 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22173115 aatatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctactttgctatc 22173016  T
Q  113 caagttctctctcaaagctcatacaagctct 143  Q
    |||||||||| || |||||||||||||||||    
T  22173015 caagttctctttctaagctcatacaagctct 22172985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 28503542 - 28503381
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    |||| ||||||||||||||| ||   | ||| |||||  |||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||    
T  28503542 tcccaagatcgtgtcacgatttgcgtctgacccaaggttgacaagtccttatcagggatacttaacgagcaagtttctgaattgtgtcacgatttcccaa 28503443  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 314  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||    
T  28503442 gatcgtgccacgatttggcgtccagcaaactagctcacggccccttgaaatcgtgtcacgat 28503381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 196 - 357
Target Start/End: Original strand, 7167702 - 7167882
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  7167702 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 7167801  T
Q  296 cttgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||                   |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7167802 cttgaaattgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaacacaaatttgaagccaatatcaaca 7167882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 192 - 314
Target Start/End: Complemental strand, 28501336 - 28501214
Alignment:
Q  192 gacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacg 291  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  28501336 gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggtgtcctgcaaactagctcacg 28501237  T
Q  292 gccacttgaaatcgtgtcacgat 314  Q
    ||| |||||||||||||||||||    
T  28501236 gccccttgaaatcgtgtcacgat 28501214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 160 - 314
Target Start/End: Complemental strand, 22172878 - 22172724
Alignment:
Q  160 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 259  Q
    ||||||||||||| || ||||||  |||||  ||| |||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22172878 atcgtgtcacgatttgcaacggaaccaaggttgaccagtccttatcagagatccttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 22172779  T
Q  260 ccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 314  Q
    |||||||||||||||||||||| | |||||||||  || ||||||||||||||||    
T  22172778 ccacgatttggcgtcctgcaaactggctcacggcacctcgaaatcgtgtcacgat 22172724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 153 - 314
Target Start/End: Original strand, 18656805 - 18656967
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  18656805 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 18656904  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagc-tcacggccacttgaaatcgtgtcacgat 314  Q
    ||||||| ||||||||||||||||||||| | || |||||||  |  ||||||||||||||||    
T  18656905 gatcgtgtcacgatttggcgtcctgcaaacttgcttcacggcaccacgaaatcgtgtcacgat 18656967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 40372436 - 40372318
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  40372436 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 40372337  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    || ||||||||||||||||    
T  40372336 ctcgaaatcgtgtcacgat 40372318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 27352261 - 27352143
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||||||      
T  27352261 agtccttatcagtgataattaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggtgttctgcaaacaagctcacggcac 27352162  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    |||||||||||||||||||    
T  27352161 cttgaaatcgtgtcacgat 27352143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 8738926 - 8738809
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||     
T  8738926 acccaaggtgattacaatgtttttcccaacccaagagatactctctacaaagacactcaacccattggttccctcctttgcaatccaagtttctctctct 8738827  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  8738826 aagctcttccaagctctc 8738809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 40372659 - 40372539
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||     
T  40372659 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 40372560  T
Q  127 aagctcatacaagctctctta 147  Q
    |||||| | ||||||||||||    
T  40372559 aagctcttccaagctctctta 40372539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 2671245 - 2671127
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||      
T  2671245 agtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcac 2671146  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    ||||||||| |||||||||    
T  2671145 cttgaaatcatgtcacgat 2671127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 7167478 - 7167595
Alignment:
Q  28 acccaaggtgattacaatgtttt-tcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctc 125  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  7167478 acccaaggtgattacaatgttttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaagtttctctctc 7167577  T
Q  126 aaagctcatacaagctct 143  Q
     |||||| | ||||||||    
T  7167578 taagctcttccaagctct 7167595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 28 - 143
Target Start/End: Complemental strand, 2671449 - 2671333
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||     
T  2671449 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 2671350  T
Q  127 aagctcatacaagctct 143  Q
    |||||| | ||||||||    
T  2671349 aagctcttccaagctct 2671333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 8477598 - 8477717
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||     
T  8477598 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctctgtaatccaagtttctctctct 8477697  T
Q  127 aagctcatacaagctctctt 146  Q
    |||||| | |||||||||||    
T  8477698 aagctcttccaagctctctt 8477717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 196 - 314
Target Start/End: Original strand, 8477822 - 8477940
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||      
T  8477822 agtccttatcaaggatacttaacgagcaagtttctcaatcgtgtcacgatttcccaagatcgtgccacgatttggcatccagcaaactagctcacggcac 8477921  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    || ||||||||||||||||    
T  8477922 ctcgaaatcgtgtcacgat 8477940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 28501560 - 28501462
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc-attggttccctcctttgctatccaagttctctctc 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||| |||||||||||||||||    
T  28501560 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcatcccttttggttccctcctttgttatccaagttctctctc 28501462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 28503727 - 28503629
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc-attggttccctcctttgctatccaagttctctctc 125  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  28503727 acccaaggtgattacaatatttttcccaacccaagagacactctcaacaaagacactcaacccttttggttccctcctttgttatccaagttctctctc 28503629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 196 - 357
Target Start/End: Complemental strand, 6718449 - 6718288
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |||||||  |||||||||||      
T  6718449 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcac 6718350  T
Q  296 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |  ||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  6718349 cccgaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 6718288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 9091164 - 9091047
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||     
T  9091164 acccaaggtgattacaatgtttttcccaacccaagagatactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 9091065  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  9091064 aagctcttccaagctctc 9091047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 212 - 349
Target Start/End: Original strand, 32143782 - 32143919
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   ||||||||||||||| | |||||||||| |||||||||||  |||||||| |||||||||||  |   ||||||||||||    
T  32143782 acttaacgagcaagtttgaaaatcgtgtcacgattccacaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacaaaatcgtgtcac 32143881  T
Q  312 gatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  32143882 gatttctctgttctttcagaccacaaatttgaagccaa 32143919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 2672642 - 2672514
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  2672642 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 2672543  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    ||||||| |||||||| || ||| |||||    
T  2672542 gatcgtggcacgattttgcttccagcaaa 2672514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 8512604 - 8512732
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | | |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  8512604 tccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 8512703  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  8512704 gatcgtgccacgattttgcttccagcaaa 8512732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 8517484 - 8517612
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | | |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  8517484 tccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 8517583  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  8517584 gatcgtgccacgattttgcttccagcaaa 8517612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 196 - 357
Target Start/End: Complemental strand, 45282746 - 45282585
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||| ||||| || ||  |||||||  |||||||||||      
T  45282746 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaacctagctcacggcac 45282647  T
Q  296 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |  ||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  45282646 cccgaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 45282585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 2676798 - 2676670
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  2676798 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagattcttaaccagcaagtttctgaatcgtgtcacgatttcccaa 2676699  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    ||||||| |||||||| || ||| |||||    
T  2676698 gatcgtggcacgattttgcttccagcaaa 2676670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 24968481 - 24968609
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||| |||||| || ||||| | | |||  ||| |||||||| ||| || ||||||| |||||||||||||||||||||||||||||||||    
T  24968481 tccctagatcgtggcacgatttgcaacggtccccaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 24968580  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  24968581 gatcgtgccacgattttgcttccagcaaa 24968609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 153 - 268
Target Start/End: Original strand, 32475848 - 32475963
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    |||||||||||||||||||| || ||||| | | | |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  32475848 tccctagatcgtgtcacgatatgcaacggtccccaagatgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 32475947  T
Q  253 gatcgtgccacgattt 268  Q
    ||||||| ||||||||    
T  32475948 gatcgtgtcacgattt 32475963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 153 - 268
Target Start/End: Original strand, 32480706 - 32480821
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    |||||||||||||||||||| || ||||| | | | |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  32480706 tccctagatcgtgtcacgatatgcaacggtccccaagatgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 32480805  T
Q  253 gatcgtgccacgattt 268  Q
    ||||||| ||||||||    
T  32480806 gatcgtgtcacgattt 32480821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 22172719 - 22172662
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22172719 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 22172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 40372313 - 40372256
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40372313 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 40372256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 1306439 - 1306541
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||  ||||||||  |||||||| |  |  |||||||||||||    
T  1306439 acttaacgagcaagtttgagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccacgaaatcgtgtcac 1306538  T
Q  312 gat 314  Q
    |||    
T  1306539 gat 1306541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 28501209 - 28501152
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28501209 aaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaatatcaaca 28501152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 28503376 - 28503319
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28503376 aaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaatatcaaca 28503319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 212 - 344
Target Start/End: Complemental strand, 27986103 - 27985971
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    ||||||| |||||||||   ||||||||||||||| | ||  |||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  27986103 acttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 27986004  T
Q  312 gatttctctgttcttccagaccacaaatttgaa 344  Q
    |||||||||||| ||||| ||||||||||||||    
T  27986003 gatttctctgttattccaaaccacaaatttgaa 27985971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 352
Target Start/End: Complemental strand, 30709318 - 30709264
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 352  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30709318 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 30709264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 18656972 - 18657029
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  18656972 aaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatatcaaca 18657029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 36029659 - 36029711
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 352  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36029659 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 36029711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 191 - 311
Target Start/End: Complemental strand, 54634895 - 54634775
Alignment:
Q  191 agacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcac 290  Q
    |||| |||||||| ||  |||||||||||||||||||||   |||||||||||||||||||  ||||||||||||||| ||  |||||||  ||||||||    
T  54634895 agaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattttgcaccctgcaacttagctcac 54634796  T
Q  291 ggccacttgaaatcgtgtcac 311  Q
    |||  |  |||||||||||||    
T  54634795 ggcaccccgaaatcgtgtcac 54634775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 350
Target Start/End: Original strand, 21711767 - 21711818
Alignment:
Q  299 gaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21711767 gaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 21711818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 349
Target Start/End: Complemental strand, 27974537 - 27974442
Alignment:
Q  254 atcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||| |  ||||||||  ||||||||||      |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27974537 atcgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 27974442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 6716265 - 6716147
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  |||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |||||||  |||||||||||      
T  6716265 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcac 6716166  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    |  ||||||||||||||||    
T  6716165 cccgaaatcgtgtcacgat 6716147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 18656604 - 18656710
Alignment:
Q  19 aaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 118  Q
    |||||| || |||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| || ||||| || ||||  ||||| | ||||||||    
T  18656604 aacccttaatcccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaaggcacacaccccataggatcccctctttgatctccaagtt 18656703  T
Q  119 ctctctc 125  Q
     ||||||    
T  18656704 ttctctc 18656710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 23198475 - 23198521
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  23198475 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 23198521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 23200674 - 23200720
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  23200674 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 23200720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 26928135 - 26928089
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  26928135 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 26928089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 1306179 - 1306296
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||| |||||||||||||||||||||||||||  ||| | ||||||||||||||| |    ||||||||||||   ||||||| |||||||||     
T  1306179 acccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaactctagagttccctcctttataatccaagtttctctctct 1306278  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  1306279 aagctcttccaagctctc 1306296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 3617091 - 3617034
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  3617091 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 3617034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 352
Target Start/End: Original strand, 16264895 - 16264948
Alignment:
Q  299 gaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 352  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  16264895 gaaatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaatat 16264948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 443 - 499
Target Start/End: Complemental strand, 17354635 - 17354581
Alignment:
Q  443 ctattattgggtggattatagagggtgagcactccatcaagtccctcaccagtgaag 499  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  17354635 ctattattgggtggattatag--ggtgagcactccatcaagtccctcaccagtgaag 17354581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 54634767 - 54634710
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  54634767 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 54634710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 350
Target Start/End: Complemental strand, 39032077 - 39032025
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  39032077 tgaaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaat 39032025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 298 - 357
Target Start/End: Complemental strand, 16498696 - 16498637
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  16498696 tgaaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 16498637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 298 - 345
Target Start/End: Original strand, 27027271 - 27027318
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  27027271 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 27027318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 40734134 - 40734087
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  40734134 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 40734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 800850 - 800748
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   ||||||||||||||||||||  |||||| |||||||||||  || |||||  ||||||||||  |  |||||||||||||    
T  800850 acttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccccgcaaaccagctcacggcatcacgaaatcgtgtcac 800751  T
Q  312 gat 314  Q
    |||    
T  800750 gat 800748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 4598926 - 4599000
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttccca-agatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||||||    
T  4598926 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttg 4599000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 4601147 - 4601221
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttccca-agatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||||||    
T  4601147 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttg 4601221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 352
Target Start/End: Original strand, 35926055 - 35926108
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 352  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  35926055 tgaaatcgtgtcacgatttctctgttcttccaaacc-caaatttgaagccaatat 35926108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 37726244 - 37726290
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  37726244 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 37726290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 2672476 - 2672427
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  2672476 aaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 2672427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 2676632 - 2676583
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  2676632 aaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 2676583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 4599050 - 4599107
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  4599050 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 4599107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 4601271 - 4601328
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  4601271 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 4601328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 6716142 - 6716085
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||    
T  6716142 aaatcgtgtcacgatttccctgttcttccagaccacaaatttcaagacaatctcaaca 6716085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 8477958 - 8478003
Alignment:
Q  313 atttctctgttcttccagaccacaaatttgaagccaatatcaacag 358  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  8477958 atttctctgttcttccagaccacaaatttgaagccaatgtcaacag 8478003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 361
Target Start/End: Complemental strand, 10055862 - 10055801
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagtat 361  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||  ||||||||||    
T  10055862 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaacagtat 10055801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 25637193 - 25637120
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  |||||||||||||||||||||   |||||||||||||||||||  ||||||||||||||||    
T  25637193 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgatttg 25637120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 351
Target Start/End: Original strand, 48438780 - 48438833
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 351  Q
    ||||||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  48438780 tgaaatcgtgtcacgatttctctgttcttacaaaccacaaatttaaagccaata 48438833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 301 - 357
Target Start/End: Complemental strand, 25637069 - 25637013
Alignment:
Q  301 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||    
T  25637069 aatcgtgtcacgatttccctgttcttccagaccacaaatttaaagacaatctcaaca 25637013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 27038606 - 27038658
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  27038606 tgaaatcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaat 27038658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 37408093 - 37408045
Alignment:
Q  301 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||    
T  37408093 aatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaa 37408045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 298 - 350
Target Start/End: Complemental strand, 40592304 - 40592252
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    ||||||| |||||||||||||| ||||||||| ||||||||||||||||||||    
T  40592304 tgaaatcatgtcacgatttctccgttcttccaaaccacaaatttgaagccaat 40592252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 1306552 - 1306595
Alignment:
Q  306 tgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  1306552 tgtcacgatttctctgttcttccagaccataaatttgaagccaa 1306595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 350
Target Start/End: Complemental strand, 1730959 - 1730916
Alignment:
Q  307 gtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  1730959 gtcacgatttctctgttcttccaaaccacaaatttgaagccaat 1730916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 2677005 - 2676939
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  2677005 tatgaaccctaaatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 2676939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 24968274 - 24968340
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  24968274 tatgaaccctaaatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 24968340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 7782657 - 7782703
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  7782657 tcgtgtcacgatttccctgttcttctagaccacaaatttgaagccaa 7782703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 10055986 - 10055912
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  10055986 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 10055912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 10058208 - 10058134
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  10058208 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 10058134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 10060430 - 10060356
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  10060430 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 10060356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 10062652 - 10062578
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  10062652 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 10062578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 10064874 - 10064800
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  10064874 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 10064800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 10067096 - 10067022
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  10067096 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 10067022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 10208959 - 10208885
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  |||| |||||||||||||||||  |||||||||||| |||||||| ||||||||||||||||    
T  10208959 agtccttatcaaggatatttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgccacgatttg 10208885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 10211159 - 10211085
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||  ||||||||| || |||||||| ||||||||||||||||    
T  10211159 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcatgattttcccaaaatcgtgccacgatttg 10211085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 298 - 351
Target Start/End: Complemental strand, 24694708 - 24694654
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagccaata 351  Q
    ||||||||| ||||||||||||||||||||| | |||||||||||||||||||||    
T  24694708 tgaaatcgtatcacgatttctctgttcttccaaaaccacaaatttgaagccaata 24694654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 33386192 - 33386146
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||    
T  33386192 tcgtgtcacgatttctctgttctttcggaccacaaatttgaagccaa 33386146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 10058084 - 10058039
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  10058084 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10058039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 10060306 - 10060261
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  10060306 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10060261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 10062528 - 10062483
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  10062528 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10062483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 10064750 - 10064705
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  10064750 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10064705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 10066972 - 10066927
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  10066972 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10066927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 10208835 - 10208778
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  10208835 aaatcgtgtcatgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 10208778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 10211035 - 10210978
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||| ||||||||||| ||| |||| ||||||    
T  10211035 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttaaagacaatctcaaca 10210978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 26928245 - 26928164
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 293  Q
    |||||||||||||||||   ||||||||||||||| | |||||| ||| |||||||||||  ||||||||  ||||||||||    
T  26928245 acttaacgagcaagtttgaaaatcgtgtcacgattccacaagattgtgtcacgatttggcaccctgcaaaccagctcacggc 26928164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 2672849 - 2672783
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||| |||| |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  2672849 tatgaaccttaaatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 2672783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 27986313 - 27986225
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 118  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  |||||||||    
T  27986313 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttccctcctttgtaatccaagtt 27986225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 40735065 - 40735018
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||||||| ||||||| |||| |||||||||||||||    
T  40735065 tgaaatcgtgtcacgatttatctgttcatccaaaccacaaatttgaag 40735018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 800740 - 800698
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||| |||||||||||||||||||||| ||||    
T  800740 tcgtgtcacgatttccctgttcttccagaccacaaattcgaag 800698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 23198365 - 23198467
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   ||||||||||||||| | | | |||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  23198365 acttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 23198464  T
Q  312 gat 314  Q
    |||    
T  23198465 gat 23198467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 27453526 - 27453572
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  27453526 tcgtgtcacaatttctctgctctttcagaccacaaatttgaagccaa 27453572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 32476014 - 32476064
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  32476014 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 32476064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 32480872 - 32480922
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  32480872 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 32480922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 33386302 - 33386200
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    ||||||| |||||||||   ||||||||||||||| | ||| |||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  33386302 acttaaccagcaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 33386203  T
Q  312 gat 314  Q
    |||    
T  33386202 gat 33386200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 306 - 351
Target Start/End: Complemental strand, 47923371 - 47923326
Alignment:
Q  306 tgtcacgatttctctgttcttccagaccacaaatttgaagccaata 351  Q
    |||||||||||||||||| || || |||||||||||||||||||||    
T  47923371 tgtcacgatttctctgttttttcaaaccacaaatttgaagccaata 47923326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 3617201 - 3617141
Alignment:
Q  209 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||||||    
T  3617201 gatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgacacgatttg 3617141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 4386831 - 4386774
Alignment:
Q  31 caaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  4386831 caaggtgattacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 4386774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 8512384 - 8512450
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  8512384 tatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 8512450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 8517264 - 8517330
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  8517264 tatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 8517330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 23392106 - 23392166
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  23392106 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 23392166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 24695023 - 24694963
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  24695023 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 24694963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 26928456 - 26928396
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  26928456 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 26928396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 36029322 - 36029382
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  36029322 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 36029382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 40592639 - 40592579
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  40592639 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 40592579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 329
Target Start/End: Original strand, 43404484 - 43404515
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttcca 329  Q
    ||||||||||||||||||||||||||||||||    
T  43404484 tgaaatcgtgtcacgatttctctgttcttcca 43404515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 23200564 - 23200642
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcac 290  Q
    |||||||||||||||||   ||||||||||||||| | | | |||||| |||||||||||  ||||||||  |||||||    
T  23200564 acttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcac 23200642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 28503557 - 28503520
Alignment:
Q  232 aatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  28503557 aatcgtgccacgatttcccaagatcgtgtcacgatttg 28503520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 345
Target Start/End: Original strand, 40845221 - 40845266
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||    
T  40845221 aaatcgtgtcacgatttctctgttctcccaaaacataaatttgaag 40845266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 21711454 - 21711511
Alignment:
Q  31 caaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    ||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  21711454 caaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 21711511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 23410529 - 23410586
Alignment:
Q  31 caaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    ||||||| ||||||||||||  |||||||||||||  ||| | |||||||||||||||||    
T  23410529 caaggtgtttacaatgtttt--ccaacccaagagaacctcactacaaagacactcaaccc 23410586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #123
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 32143552 - 32143629
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 107  Q
    |||||||||| ||||||||||||  |||||||||||||   || | |||||||||||||||||    |||||||||||||    
T  32143552 acccaaggtgtttacaatgtttt--ccaacccaagagatcatcactacaaagacactcaaccctagagttccctcctttg 32143629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #124
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 47923761 - 47923704
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 87  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||    
T  47923761 acccaaggtgtttacaatgttt--cccaacccaagagattctcactacaaagacactcaa 47923704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 153 - 358
Target Start/End: Complemental strand, 34777 - 34553
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34777 tccctagatcgtgtcacgatctgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 34678  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttg-------------------aaatcgtgtcacgatttctctgttcttccagacc 333  Q
    |||||||||||||||||||||| ||||||  | || |||||||||||                   ||||||||||||||||||||||||||||||||||    
T  34677 gatcgtgccacgatttggcgtcatgcaaacaaactaacggccacttgaaatagtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagacc 34578  T
Q  334 acaaatttgaagccaatatcaacag 358  Q
    |||||||||||||||||||||||||    
T  34577 acaaatttgaagccaatatcaacag 34553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 34980 - 34846
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34980 tatgaaccctaaaacccaaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 34881  T
Q  115 agttctctctcaaagctcatacaagctctcttaag 149  Q
    ||||||||||| |||||||||||||||||||||||    
T  34880 agttctctctctaagctcatacaagctctcttaag 34846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 9e-65; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 39811700 - 39811539
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  39811700 tccctagatcgtgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 39811601  T
Q  253 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 314  Q
    ||||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||    
T  39811600 gatcgtgccacgatttggcgtcctgcaaacttgcttacggtcacttgaaatcgtgtcacgat 39811539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 39811907 - 39811775
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgctatcc 113  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39811907 tatgaaccctaaaacccaaggtgattacaatgtttttctcaacctaagagacactctcaacaaagacactcaacccatttggttccctcctttgctatcc 39811808  T
Q  114 aagttctctct-caaagctcatacaagctctct 145  Q
    ||||||||| | |||||||||||||||||||||    
T  39811807 aagttctctgtacaaagctcatacaagctctct 39811775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 196 - 357
Target Start/End: Complemental strand, 11098567 - 11098387
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  11098567 agtccttatcagtgatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 11098468  T
Q  296 cttgaaatcgtg-------------------tcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11098467 cttgaaatcgtgtcactatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 11098387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 196 - 358
Target Start/End: Original strand, 14291945 - 14292126
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  14291945 agtccttatcagtggtacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 14292044  T
Q  296 cttg-------------------aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 358  Q
    || |                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14292045 ctcgagatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 14292126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 9296042 - 9295924
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 295  Q
    |||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||      
T  9296042 agtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcac 9295943  T
Q  296 cttgaaatcgtgtcacgat 314  Q
    |||||||||||||||||||    
T  9295942 cttgaaatcgtgtcacgat 9295924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 28 - 143
Target Start/End: Complemental strand, 11098790 - 11098674
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||     
T  11098790 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 11098691  T
Q  127 aagctcatacaagctct 143  Q
    |||||| | ||||||||    
T  11098690 aagctcttccaagctct 11098674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 14291722 - 14291840
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||||  ||||||| |||||||||     
T  14291722 acccaaggtgattacaatgtttttcccaacccaagagacactatctacaaagacgctcaaccctttggttccctcctttgtaatccaagtttctctctct 14291821  T
Q  127 aagctcatacaagctctct 145  Q
    |||||| | ||||||||||    
T  14291822 aagctcttccaagctctct 14291840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 9296265 - 9296148
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||| ||||||||||||||||  ||||||| || ||||||     
T  9296265 acccaaggtgattacaatgtttttcccaacccaatagacactttctacaaagacactcaaccctttggttccctcctttgtaatccaagtttttctctct 9296166  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  9296165 aagctcttccaagctctc 9296148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 19344786 - 19344914
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    |||||||||||||||| |||||| ||||| | | |||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  19344786 tccctagatcgtgtcatgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 19344885  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||| ||||| || ||| |||||    
T  19344886 gatcgtgccatgattttgcttccagcaaa 19344914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 19349644 - 19349772
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| |   |||  ||| |||||||| ||| |||||||||| | |||||||||||||||||||||||||||||||    
T  19349644 tccctagatcgtgtcacgatctgcaacggtcctcaggttgaccagtccttatcagagatacttaaccaacaagtttctgaatcgtgtcacgatttcccaa 19349743  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  19349744 gatcgtgccacgattttgcttccagcaaa 19349772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 3492212 - 3492314
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  3492212 acttaacgagcaagtttcagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 3492311  T
Q  312 gat 314  Q
    |||    
T  3492312 gat 3492314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 9295919 - 9295862
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9295919 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 9295862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 212 - 349
Target Start/End: Complemental strand, 28258815 - 28258678
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    ||||||| |||||||||   ||||||||||||||||| ||| || ||||||||||||| |  ||||||||  ||||||||||      ||||||||||||    
T  28258815 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcac 28258716  T
Q  312 gatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  28258715 gatttctctgtttttccaaaccacaaatttgaagccaa 28258678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 32247295 - 32247352
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32247295 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 32247352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 39811534 - 39811477
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39811534 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 39811477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 44310528 - 44310471
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44310528 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 44310471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 30833086 - 30832984
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  30833086 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 30832987  T
Q  312 gat 314  Q
    |||    
T  30832986 gat 30832984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 32247150 - 32247244
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgattt 247  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||| ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  32247150 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtctttatcagtgatacttaacgagcaagtttctgaatcgtgccacgattt 32247244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 25409860 - 25409976
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||    |||||||||| ||  ||||||| |||||||||     
T  25409860 acccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagtgttccctcctctgtaatccaagtttctctctct 25409959  T
Q  127 aagctcatacaagctct 143  Q
    |||||| | ||||||||    
T  25409960 aagctcttccaagctct 25409976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 4484758 - 4484860
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   ||||||||||||||| |  ||||||||| |||||||||||  |||||||| |||||||||||  | ||||||||||||||    
T  4484758 acttaacgagcaagtttgcaaatcgtgtcacgattccttaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcatgaaatcgtgtcac 4484857  T
Q  312 gat 314  Q
    |||    
T  4484858 gat 4484860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 352
Target Start/End: Complemental strand, 8389683 - 8389629
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 352  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8389683 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 8389629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 32246954 - 32247064
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| || ||||| ||  |||  ||||| | ||||    
T  32246954 tatgaaccctaaatcccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaaggcacacaccccataggaccccctctttgatctcca 32247053  T
Q  115 agttctctctc 125  Q
    |||| ||||||    
T  32247054 agttttctctc 32247064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 209 - 314
Target Start/End: Original strand, 25410098 - 25410203
Alignment:
Q  209 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgt 308  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  ||||||||  | ||||||||  |   |||||||||    
T  25410098 gatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccatctcacggcatcacaaaatcgtgt 25410197  T
Q  309 cacgat 314  Q
    ||||||    
T  25410198 cacgat 25410203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 352
Target Start/End: Complemental strand, 10706785 - 10706731
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 352  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  10706785 tgaaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaatat 10706731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 25410211 - 25410257
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  25410211 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 25410257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 32289203 - 32289157
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32289203 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 32289157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 12647787 - 12647860
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  |||||||||||||||||||| || |||||||||||||||||||  ||||||||||||||||    
T  12647787 agtccttatcaaggatacttaacgagcaagtttatggatcgtgtcacgatttcccacaatcgtgccacgatttg 12647860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 12647910 - 12647967
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  12647910 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 12647967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 298 - 351
Target Start/End: Original strand, 21630509 - 21630562
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 351  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  21630509 tgaaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaata 21630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 298 - 351
Target Start/End: Original strand, 39483441 - 39483494
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 351  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  39483441 tgaaatcgtgtcacaatttctctgttcttccaaaccacaaatttgaagccaata 39483494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 350
Target Start/End: Complemental strand, 33528157 - 33528105
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  33528157 tgaaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 33528105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 306 - 349
Target Start/End: Complemental strand, 30832973 - 30832930
Alignment:
Q  306 tgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  30832973 tgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30832930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 4484868 - 4484910
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4484868 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 4484910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 352
Target Start/End: Complemental strand, 23078004 - 23077950
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 352  Q
    |||||||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  23078004 tgaaatcgtgtcacgatttctctgttcttccaaaccaaaattttgaagccaatat 23077950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 36757475 - 36757425
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  36757475 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaat 36757425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 40739402 - 40739448
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  40739402 tcgtgtcacgatttgtctgttcttccagaccacaaatttgaagccaa 40739448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 3491981 - 3492085
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    |||||||||| ||||||||||||| |||||||||||||  ||| | |||||||||||||||||     ||||||||||||  ||||||| |||||||||     
T  3491981 acccaaggtgtttacaatgttttttccaacccaagagatcctcactacaaagacactcaaccctagatttccctcctttgtaatccaagtttctctctct 3492080  T
Q  127 aagct 131  Q
    |||||    
T  3492081 aagct 3492085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 20522794 - 20522838
Alignment:
Q  306 tgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  20522794 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 20522838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 6266439 - 6266337
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||| ||||||   ||||||||||||||||||||  |||||| |||||||||||  ||||||||  ||||||||||  |  ||||| |||||||    
T  6266439 acttaacgagtaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaattgtgtcac 6266340  T
Q  312 gat 314  Q
    |||    
T  6266339 gat 6266337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 32289313 - 32289211
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   ||||||||||||||| | |||||||||| || ||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  32289313 acttaacgagcaagttttcaaatcgtgtcacgattcctcaagatcgtgtcaagatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 32289214  T
Q  312 gat 314  Q
    |||    
T  32289213 gat 32289211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 40739063 - 40739151
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 118  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  |||||||||    
T  40739063 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtt 40739151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 6266329 - 6266287
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  6266329 tcgtgtcacgatttccatgttcttccagaccacaaatttgaag 6266287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 352
Target Start/End: Original strand, 13569894 - 13569948
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 352  Q
    ||||||| ||||| ||||| ||||||||| || ||||||||||||||||||||||    
T  13569894 tgaaatcatgtcatgatttttctgttctttcaaaccacaaatttgaagccaatat 13569948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 19344952 - 19345002
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  19344952 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 19345002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 40739292 - 40739373
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 293  Q
    |||||||||||||||||   ||| ||||||| ||| | |||||||||| |||||||||||  ||||||||  ||||||||||    
T  40739292 acttaacgagcaagtttgaaaattgtgtcacaattccacaagatcgtgtcacgatttggcaccctgcaaaccagctcacggc 40739373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 3492332 - 3492368
Alignment:
Q  313 atttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||| ||||||||||||||||||||||    
T  3492332 atttctctgttctttcagaccacaaatttgaagccaa 3492368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 23078339 - 23078251
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 118  Q
    |||||||||| |||||||||||  ||||||||||||||  |||   ||||||||||||||||||   ||| |||||||||  |||||||||    
T  23078339 acccaaggtgtttacaatgttt--cccaacccaagagattctcatcacaaagacactcaacccaaaagttacctcctttgtaatccaagtt 23078251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 36757630 - 36757570
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  36757630 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 36757570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 39483162 - 39483222
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| ||||||| |||  ||||||||||||||  ||| |||||||||||||||||||    
T  39483162 acccaaggtgtttacaatattt--cccaacccaagagatcctcacaacaaagacactcaaccc 39483222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 17865434 - 17865529
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctc 125  Q
    |||||||||| ||||||||  |||||||||||||||||   || | |||||||||||||||||    ||| |||||||||  ||||||||||| ||||    
T  17865434 acccaaggtgtttacaatg--tttcccaacccaagagatcttcactacaaagacactcaaccctaaagttacctcctttgtaatccaagttctgtctc 17865529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 19344588 - 19344655
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtt---tttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || ||||||||||||||||||||   |||||||||| |||| ||||||||| |||||    
T  19344588 tatgaacccataatcccaaggtgattacaatgttgtttttcccaacctaagaaacactctcatcaaag 19344655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 19349446 - 19349513
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtt---tttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || ||||||||||||||||||||   |||||||||| |||| ||||||||| |||||    
T  19349446 tatgaacccataatcccaaggtgattacaatgttgtttttcccaacctaagaaacactctcatcaaag 19349513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 350
Target Start/End: Original strand, 19349819 - 19349860
Alignment:
Q  309 cacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    ||||||| ||||||||||||| |||||||||||||| |||||    
T  19349819 cacgattcctctgttcttccaaaccacaaatttgaaaccaat 19349860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 21630174 - 21630232
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaac 88  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||    
T  21630174 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaac 21630232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 20522471 - 20522511
Alignment:
Q  50 ttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||||||||| |||| | |||||||||||||||||    
T  20522471 ttcccaacccaagagatactcactacaaagacactcaaccc 20522511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 29867840 - 29867780
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca 91  Q
    |||||||||| ||||||||  ||||||||||||||||| ||||| | ||||||| |||||||||    
T  29867840 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccca 29867780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 41586419 - 41586358
Alignment:
Q  28 acccaaggtgattacaa-tgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| |||||| ||||||  |||||||||||||  |||||| ||||||||||||||||    
T  41586419 acccaaggtgtttacaactgtttt--ccaacccaagagaagctctcaccaaagacactcaaccc 41586358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 116; Significance: 9e-59; HSPs: 4)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 155 - 314
Target Start/End: Complemental strand, 3558 - 3399
Alignment:
Q  155 cctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaga 254  Q
    ||||||||||||||||||||| ||||| | | |||  ||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  3558 cctagatcgtgtcacgatctgcaacggtccccaggttgactagtccttatcattgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaga 3459  T
Q  255 tcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 314  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  3458 tcgtgccacgatttggcgtccttcaaactagctcacggccacttgaaatcgtgtcacgat 3399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 3767 - 3627
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgctatcc 113  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3767 tatgaaccctaaaacccaaggtgattacaatgtttttcctaacctaagagacactctcaacaaagacactcaacccatttggttccctcctttgctatcc 3668  T
Q  114 aagttctctct-caaagctcatacaagctctcttaagttct 153  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  3667 aagttctctctacaaagctcatacaatctctcttaagttct 3627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 3394 - 3337
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3394 aaatcgtgtcacgatttctcttttcttccagaccacaaatttgaagccaatatcaaca 3337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 9562 - 9514
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaaga 63  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9562 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacctaaga 9514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 22119 - 22002
Alignment:
Q  197 gtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccac 296  Q
    ||||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||  |    
T  22119 gtccttatcagtgatacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacc 22020  T
Q  297 ttgaaatcgtgtcacgat 314  Q
    | ||||||||||||||||    
T  22019 tcgaaatcgtgtcacgat 22002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 349
Target Start/End: Complemental strand, 21986 - 21948
Alignment:
Q  311 cgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  21986 cgatttctctgttcttccagaccacaaatttgaaaccaa 21948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 81; Significance: 7e-38; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 176673 - 176545
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||||| ||| |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  176673 tccctagatcgtgtcacgatctgcaacggacccaaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 176574  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  176573 gatcgtgccacgattttgcttccagcaaa 176545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 176895 - 176829
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  176895 tatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 176829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 722 - 850
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||||  ||| |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  722 tccctagatcgtgtcacgatctgcaacggaaccaaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 821  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  822 gatcgtgccacgattttgcatccagcaaa 850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 888 - 945
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  888 aaatcgtgtcacgatttctctgttcttccataccacaaatttgaagccaatttcaaca 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 528 - 638
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatcca 114  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || ||||| || ||||  ||||| | ||||    
T  528 tatgaacccaaaatcccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccataggatcccctctttgatctcca 627  T
Q  115 agttctctctc 125  Q
    || | ||||||    
T  628 agatttctctc 638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 1962 - 1834
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | |||||  ||| |||||||| ||| || ||||||| |||||||||||||||||||||||||||||||||    
T  1962 tccctagatcgtgtcacgatctgcaacggtcccaaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 1863  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  1862 gatcgtgccacgattttgcttccagcaaa 1834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 2169 - 2103
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  2169 tatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 2103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 1796 - 1746
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||| ||||||| ||||||||||||| ||||| ||||||||| ||||    
T  1796 aaatcgtgacacgattcctctgttcttccaaaccactaatttgaagtcaat 1746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 148667 - 148539
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | |||||  ||| |||||||| ||| || ||||||| |||||||||||||||||||||||||||||||||    
T  148667 tccctagatcgtgtcacgatctgcaacggtcccaaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 148568  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  148567 gatcgtgccacgattttgcttccagcaaa 148539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 148874 - 148808
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  148874 tatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 148808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 148501 - 148451
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||| ||||||| ||||||||||||| ||||| ||||||||| ||||    
T  148501 aaatcgtgacacgattcctctgttcttccaaaccactaatttgaagtcaat 148451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 73; Significance: 4e-33; HSPs: 5)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 14007 - 13879
Alignment:
Q  153 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 252  Q
    ||||||||||||||||||||||| ||||| | | | |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  14007 tccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 13908  T
Q  253 gatcgtgccacgatttggcgtcctgcaaa 281  Q
    |||||||||||||||| || ||| |||||    
T  13907 gatcgtgccacgattttgcttccagcaaa 13879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 157 - 281
Target Start/End: Complemental strand, 18883 - 18759
Alignment:
Q  157 tagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatc 256  Q
    |||||||||||||||| || ||||| | | |||  ||| |||| ||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  18883 tagatcgtgtcacgatttgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatc 18784  T
Q  257 gtgccacgatttggcgtcctgcaaa 281  Q
    ||| |||||||| || ||| |||||    
T  18783 gtggcacgattttgcttccagcaaa 18759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 14227 - 14161
Alignment:
Q  15 tatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||  || |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  14227 tatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 14161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 18721 - 18671
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||| | ||||||| ||||||||| ||| ||||||||||||||||||||    
T  18721 aaatcgcgacacgattcctctgttctcccaaaccacaaatttgaagccaat 18671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 19068 - 19017
Alignment:
Q  30 ccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 79  Q
    |||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  19068 ccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 19017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 62; Significance: 1e-26; HSPs: 4)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 17818 - 17701
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  17818 acccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 17719  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  17718 aagctcttccaagctctc 17701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 23911 - 23794
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 126  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  23911 acccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 23812  T
Q  127 aagctcatacaagctctc 144  Q
    |||||| | |||||||||    
T  23811 aagctcttccaagctctc 23794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 209 - 314
Target Start/End: Complemental strand, 17599 - 17494
Alignment:
Q  209 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgt 308  Q
    ||||||||||||||||||||   |||| ||||||||||||||||||||||| |||||||||||  ||||||||  ||||||||||  |  ||||||||||    
T  17599 gatacttaacgagcaagtttgaaaatcatgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgt 17500  T
Q  309 cacgat 314  Q
    ||||||    
T  17499 cacgat 17494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 17486 - 17440
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17486 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 17440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 1766 - 1709
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1766 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 1709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 51; Significance: 5e-20; HSPs: 4)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 11589 - 11690
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||| |||||||||||  ||||||||  ||||||||||  | ||||||||||||||    
T  11589 acttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcatgaaatcgtgtcac 11687  T
Q  312 gat 314  Q
    |||    
T  11688 gat 11690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 9253 - 9299
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  9253 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 9144 - 9245
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    |||||||||||||||||   ||||||||||||||||||||| ||| || |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  9144 acttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atcatgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 9242  T
Q  312 gat 314  Q
    |||    
T  9243 gat 9245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 11698 - 11744
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  11698 tcgtgtcacgatttctctgttcttccagaccacaattttgaagccaa 11744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 4130 - 4203
Alignment:
Q  196 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    |||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  4130 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttg 4203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 4253 - 4310
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  4253 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 4310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 349
Target Start/End: Original strand, 45678 - 45795
Alignment:
Q  232 aatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgatttctctgttcttccaga 331  Q
    ||||||||||||||||| ||  |||||||||||||||| |  ||||||||  |||||||| |      |||| ||||||||||||||||||||||||| |    
T  45678 aatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaatcagctcacgacattacaaaattgtgtcacgatttctctgttcttccaaa 45777  T
Q  332 ccacaaatttgaagccaa 349  Q
    ||||||||||||||||||    
T  45778 ccacaaatttgaagccaa 45795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 49; Significance: 8e-19; HSPs: 5)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 6250 - 6302
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6250 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 6302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 3058 - 3110
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 350  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  3058 tgaaatcgtgtcatgatttctctgttcttccaaaccacaaatttgaagccaat 3110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 298 - 357
Target Start/End: Original strand, 149599 - 149658
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    ||||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  149599 tgaaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 149658  T

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Target: scaffold0006; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 301 - 345
Target Start/End: Complemental strand, 132809 - 132765
Alignment:
Q  301 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  132809 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 132765  T

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Target: scaffold0006; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 133147 - 133059
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 118  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||| |||||||||    |||||||||||||  |||||||||    
T  133147 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagaaactcaaccctaaagttccctcctttgtaatccaagtt 133059  T

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Target: scaffold0565 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 269
Target Start/End: Original strand, 3019 - 3078
Alignment:
Q  210 atacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    |||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  3019 atacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttg 3078  T

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Target: scaffold0565; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 3128 - 3185
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  3128 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 3185  T

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Target: scaffold1519 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 647 - 545
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 311  Q
    ||||||||||||| |||   ||||||||||||||| | |||||||||| |||||||||||  |||||||| |||||||||||  |  |||||||||||||    
T  647 acttaacgagcaaatttgaaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaatcgtgtcac 548  T
Q  312 gat 314  Q
    |||    
T  547 gat 545  T

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Target: scaffold0140 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 7966 - 7920
Alignment:
Q  303 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  7966 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 7920  T

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Target: scaffold0140; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 8285 - 8197
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 118  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  |||||||||    
T  8285 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttccctcctttgtaatccaagtt 8197  T

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Target: scaffold0087 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 236 - 350
Target Start/End: Complemental strand, 36446 - 36332
Alignment:
Q  236 gtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccac 335  Q
    |||||||| |||| ||| |||||||||||||||| |  ||||||||  |||||||| |      ||||||| ||| |||||||||||||||||| |||||    
T  36446 gtgtcacgttttcacaaaatcgtgccacgatttgacaccctgcaaaccagctcacgacattacaaaatcgtatcatgatttctctgttcttccaaaccac 36347  T
Q  336 aaatttgaagccaat 350  Q
    |||||||||||||||    
T  36346 aaatttgaagccaat 36332  T

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Target: scaffold0087; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 43491 - 43443
Alignment:
Q  301 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 349  Q
    |||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  43491 aatcgtgtcacgatttctctattcttccaaaccataaatttgaagccaa 43443  T

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Target: scaffold0087; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 36700 - 36640
Alignment:
Q  28 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 90  Q
    |||||||||| ||||||||||||  |||||||||||||  ||| | |||||||||||||||||    
T  36700 acccaaggtgtttacaatgtttt--ccaacccaagagatcctcactacaaagacactcaaccc 36640  T

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Target: scaffold0137 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 5916 - 5859
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 357  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  5916 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 5859  T

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Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 352
Target Start/End: Original strand, 86151 - 86206
Alignment:
Q  298 tgaaatcgtgtcacgatttctctgttcttccagaccac-aaatttgaagccaatat 352  Q
    ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  86151 tgaaatcgtgtcacgatttctctattcttccaaaccacaaaatttgaagccaatat 86206  T

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Target: scaffold0510 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 1141 - 1096
Alignment:
Q  300 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 345  Q
    ||||||||||||||||| ||||||||| || |||||||||||||||    
T  1141 aaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaag 1096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 1248 - 1191
Alignment:
Q  212 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 269  Q
    ||||||| |||||||||   ||||||||||||||||| ||| ||||| ||||||||||    
T  1248 acttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttg 1191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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