View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16815_high_26 (Length: 429)
Name: NF16815_high_26
Description: NF16815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16815_high_26 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 18 - 413
Target Start/End: Complemental strand, 40062761 - 40062368
Alignment:
| Q |
18 |
ataaaatattcaaacaaaagaatgatcatctatctacttcactccattatgttttcccctaattaaaacaactattttccatcatatagtaacttttttc |
117 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
40062761 |
ataaaatattcaaacaaaagaatgatcatctatctacttcactccattatgtttttccctaataaaaacaactattttccatcatatagtaacttttttc |
40062662 |
T |
|
| Q |
118 |
ccctnnnnnnnnnncaatttcctctaaattttacattgatttaagtaaatcattgaaatcgaaatagttaaaaa-gttgacacgttgtgagggtagaacc |
216 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |
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| T |
40062661 |
ccctaaaaaaaaa-caatttcctctaaattttacattgatttaagtaaatcattgaaatcgaaatagttaaaaaagttgacacgttgtgagg-tagaacc |
40062564 |
T |
|
| Q |
217 |
aaacatacacctaattttcccttaaaaacataatttcctctcaatttcacatggtgatttaaggaaagcatcaaaatagttnnnnnnnngtttacacgtt |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
40062563 |
aaacatacacctaattttcccttaaaaacataatttcctctcaatttcacatggtgatttaaggaaagcatcaaaatagtt-aaaaaaagtttacacgtt |
40062465 |
T |
|
| Q |
317 |
aaagcactatgtttatcaaattttaatagttaacgtatcgaattttgtgatgctcttgaatgagtttgannnnnnngcccaaaggttgtagaccttt |
413 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
40062464 |
aaagcactatgtttatcaaattttaatagttaacgtatggaattttgtgatgctcttgaatgagtttgatttttttgcccaaaggttgtagaccttt |
40062368 |
T |
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