View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16815_high_29 (Length: 420)

Name: NF16815_high_29
Description: NF16815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16815_high_29
NF16815_high_29
[»] chr5 (24 HSPs)
chr5 (1-400)||(30786092-30786491)
chr5 (49-247)||(12042099-12042299)
chr5 (45-246)||(19984974-19985176)
chr5 (45-225)||(17037543-17037723)
chr5 (45-225)||(5078984-5079164)
chr5 (45-225)||(7410824-7411004)
chr5 (126-246)||(9354390-9354510)
chr5 (56-246)||(31571008-31571203)
chr5 (82-221)||(23679445-23679584)
chr5 (82-221)||(23855227-23855366)
chr5 (126-246)||(9333562-9333682)
chr5 (144-225)||(31068982-31069062)
chr5 (162-246)||(18191886-18191970)
chr5 (146-246)||(10869417-10869516)
chr5 (46-247)||(38449889-38450088)
chr5 (101-196)||(37233061-37233156)
chr5 (185-246)||(17535350-17535411)
chr5 (101-194)||(42076078-42076171)
chr5 (103-210)||(40401987-40402094)
chr5 (129-246)||(15160366-15160483)
chr5 (206-248)||(42076044-42076086)
chr5 (182-246)||(12004567-12004630)
chr5 (144-247)||(30655195-30655298)
chr5 (195-247)||(19615102-19615154)
[»] chr1 (17 HSPs)
chr1 (45-247)||(28636881-28637084)
chr1 (34-246)||(897434-897646)
chr1 (36-247)||(18308126-18308338)
chr1 (34-225)||(51758753-51758944)
chr1 (144-246)||(5911683-5911785)
chr1 (93-246)||(12189931-12190084)
chr1 (129-225)||(16222778-16222874)
chr1 (45-246)||(39368558-39368761)
chr1 (88-225)||(1843953-1844089)
chr1 (159-225)||(37097374-37097440)
chr1 (144-225)||(15214327-15214408)
chr1 (144-247)||(17112903-17113006)
chr1 (144-205)||(3399642-3399703)
chr1 (129-216)||(13208621-13208708)
chr1 (144-206)||(15204613-15204675)
chr1 (165-225)||(15193919-15193979)
chr1 (188-233)||(10038903-10038948)
[»] chr7 (20 HSPs)
chr7 (36-247)||(26619014-26619224)
chr7 (59-247)||(26608472-26608661)
chr7 (36-247)||(26621001-26621213)
chr7 (80-244)||(30089716-30089880)
chr7 (45-225)||(4685323-4685503)
chr7 (45-221)||(9242404-9242580)
chr7 (37-241)||(20277270-20277476)
chr7 (76-225)||(10022124-10022273)
chr7 (82-222)||(26224935-26225075)
chr7 (82-225)||(26205372-26205515)
chr7 (79-246)||(3234306-3234473)
chr7 (45-237)||(8241586-8241778)
chr7 (185-246)||(14803120-14803181)
chr7 (185-246)||(15250114-15250175)
chr7 (144-221)||(16170275-16170352)
chr7 (101-193)||(16086519-16086611)
chr7 (34-99)||(3374523-3374589)
chr7 (143-200)||(3374326-3374383)
chr7 (129-173)||(2233417-2233461)
chr7 (129-246)||(24731759-24731876)
[»] chr8 (22 HSPs)
chr8 (34-225)||(17634380-17634571)
chr8 (45-223)||(45356032-45356210)
chr8 (45-246)||(5650864-5651066)
chr8 (45-246)||(14997600-14997802)
chr8 (45-245)||(29345411-29345613)
chr8 (45-221)||(19369830-19370006)
chr8 (45-225)||(25638807-25638987)
chr8 (45-221)||(19448452-19448628)
chr8 (45-221)||(19532448-19532624)
chr8 (45-225)||(28248999-28249175)
chr8 (34-225)||(5528743-5528934)
chr8 (45-225)||(25637644-25637823)
chr8 (37-246)||(6801736-6801951)
chr8 (107-246)||(6403572-6403711)
chr8 (36-192)||(6223434-6223592)
chr8 (85-246)||(31347328-31347489)
chr8 (126-247)||(29553607-29553728)
chr8 (45-221)||(18766921-18767097)
chr8 (147-243)||(5000661-5000757)
chr8 (182-247)||(19341477-19341543)
chr8 (173-246)||(7292813-7292885)
chr8 (182-246)||(29118587-29118650)
[»] chr6 (24 HSPs)
chr6 (45-221)||(14669266-14669442)
chr6 (45-225)||(12591833-12592013)
chr6 (45-225)||(16734805-16734985)
chr6 (44-246)||(1942548-1942751)
chr6 (45-225)||(11936687-11936867)
chr6 (45-225)||(15361715-15361895)
chr6 (45-221)||(17719643-17719819)
chr6 (45-213)||(11948667-11948835)
chr6 (109-248)||(29667899-29668040)
chr6 (93-246)||(4485533-4485686)
chr6 (45-242)||(23904270-23904469)
chr6 (101-225)||(6684094-6684217)
chr6 (34-206)||(10070674-10070845)
chr6 (129-249)||(23264500-23264622)
chr6 (111-243)||(9631141-9631273)
chr6 (182-244)||(6673675-6673737)
chr6 (144-225)||(15690438-15690519)
chr6 (128-225)||(27969920-27970017)
chr6 (146-237)||(4591138-4591229)
chr6 (81-224)||(34374826-34374971)
chr6 (144-247)||(6346877-6346980)
chr6 (144-244)||(10935800-10935901)
chr6 (195-247)||(14003851-14003903)
chr6 (195-247)||(16722338-16722390)
[»] chr3 (21 HSPs)
chr3 (45-223)||(2550168-2550346)
chr3 (45-221)||(13845996-13846172)
chr3 (45-225)||(7407674-7407854)
chr3 (75-225)||(1627897-1628047)
chr3 (45-220)||(2943135-2943309)
chr3 (45-225)||(1654576-1654756)
chr3 (73-246)||(9633390-9633563)
chr3 (45-248)||(27259373-27259568)
chr3 (105-246)||(16457311-16457452)
chr3 (34-157)||(28745043-28745167)
chr3 (83-246)||(5498457-5498619)
chr3 (103-245)||(26707839-26707981)
chr3 (93-220)||(36035294-36035421)
chr3 (129-231)||(1613217-1613319)
chr3 (93-243)||(27713407-27713554)
chr3 (168-246)||(36035451-36035529)
chr3 (93-176)||(26735683-26735766)
chr3 (74-200)||(35083001-35083127)
chr3 (165-246)||(36034998-36035079)
chr3 (195-248)||(23358526-23358579)
chr3 (195-248)||(23363347-23363400)
[»] chr4 (18 HSPs)
chr4 (45-223)||(43600269-43600447)
chr4 (47-225)||(47065956-47066134)
chr4 (45-221)||(1684872-1685048)
chr4 (129-246)||(4881073-4881190)
chr4 (45-221)||(1152048-1152224)
chr4 (75-225)||(53300351-53300501)
chr4 (110-238)||(4904125-4904253)
chr4 (34-209)||(21539181-21539355)
chr4 (101-246)||(24558971-24559116)
chr4 (45-246)||(37750911-37751110)
chr4 (181-246)||(4923689-4923754)
chr4 (45-157)||(27739693-27739807)
chr4 (147-216)||(48464049-48464118)
chr4 (165-243)||(26075290-26075368)
chr4 (128-176)||(21317487-21317535)
chr4 (218-246)||(26083909-26083937)
chr4 (195-247)||(28461067-28461119)
chr4 (195-247)||(54186507-54186559)
[»] chr2 (12 HSPs)
chr2 (45-225)||(31342636-31342816)
chr2 (47-225)||(30267003-30267181)
chr2 (34-247)||(24479130-24479344)
chr2 (76-225)||(15513667-15513816)
chr2 (45-245)||(7702409-7702610)
chr2 (73-225)||(40016591-40016744)
chr2 (45-225)||(7718185-7718365)
chr2 (45-225)||(44920958-44921137)
chr2 (101-241)||(11017441-11017581)
chr2 (129-246)||(41573372-41573489)
chr2 (73-247)||(22966501-22966677)
chr2 (86-244)||(26734732-26734887)
[»] scaffold0576 (1 HSPs)
scaffold0576 (45-225)||(6699-6879)
[»] scaffold0684 (1 HSPs)
scaffold0684 (45-221)||(667-843)
[»] scaffold0069 (1 HSPs)
scaffold0069 (45-218)||(40618-40791)
[»] scaffold0002 (1 HSPs)
scaffold0002 (108-239)||(446266-446397)
[»] scaffold0007 (1 HSPs)
scaffold0007 (162-246)||(8724-8807)


Alignment Details
Target: chr5 (Bit Score: 348; Significance: 0; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 1 - 400
Target Start/End: Complemental strand, 30786491 - 30786092
Alignment:
Q  1 aatagggagtaatttgcaattt-gatannnnnnnattgttattgatgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttaca 99  Q
    |||||||||||||||||||||| ||||       |||||||||||||||| |||| |||||||||||||| ||||||||||||||||||| |||||||||    
T  30786491 aatagggagtaatttgcaattttgatatttttttattgttattgatgataaaaaa-gtgttacaataatggatattttgcgacacttttttattgttaca 30786393  T
Q  100 aataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgat 199  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30786392 aataataacataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgat 30786293  T
Q  200 taagttacaattttcaagtgttactagatcttaattatgttgtagtgtttagaggctagtttttataatattcaattaaattatatacaagtagtaagta 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30786292 taagttacaattttcaagtgttactagatcttaattatgttgtagtgtttagaggctagtttttataatattcaattaaattatatacaagtagtaagta 30786193  T
Q  300 aagttaatattacgagacatagatatgtaaattaaatatcaataaaccaaatactatatgcttagagacaccatgcatggttttgaattttaaccctaat 399  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30786192 aagttaatattacgagacatagatatgtaaattaaatatcaataaaccaaatactatatgcttagagacaccatgcatggttttgaattttaaccctaat 30786093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 49 - 247
Target Start/End: Original strand, 12042099 - 12042299
Alignment:
Q  49 acaaaatgtgttacaataatgaat-attttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggca-ttt 146  Q
    |||||| |||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||| |||||| || |||||||| | |    |||    
T  12042099 acaaaaagtgttacaataatgtatcattttgcgacacttttttattattacaaataataatataaaatgtaactaaaactctttagtaataggtttcttt 12042198  T
Q  147 acctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||    
T  12042199 acctaacaattgttcaaatgttactaaattgaatcagtaacatttttcttgatttagttacaattttcaaatattactggatcttaattatgttgtagtg 12042298  T
Q  247 t 247  Q
    |    
T  12042299 t 12042299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 45 - 246
Target Start/End: Complemental strand, 19985176 - 19984974
Alignment:
Q  45 tgatacaaaatgtgttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggca 143  Q
    |||||||||| |||||||||||||| || ||||||| ||||||||||||| ||||| |||||| |||||||||| |||||| || |||||||||  ||      
T  19985176 tgatacaaaaagtgttacaataatgtaacattttgcaacactttttgattattacatataatactataaaatgtaactaaaactctttagtaacctggac 19985077  T
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgta 243  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||||| |||||| |||||| ||||||||||| || |||||||||||||    
T  19985076 tttacctaacaattattcaaatgttactaaatctaattagtaacattttccttgatttagttaccattttcgagtgttactagttcataattatgttgta 19984977  T
Q  244 gtg 246  Q
    |||    
T  19984976 gtg 19984974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 45 - 225
Target Start/End: Complemental strand, 17037723 - 17037543
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||||| |   ||||||||||||||| ||||||||| |||||| |||||||||| |||||| || ||||||||||  |  |    
T  17037723 tgatacaaaaagtgttacaataatgtaacatttgcgacactttttaattgttacagataatactataaaatgtaactaaaactctttagtaacactgact 17037624  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||| |||||| |||||||||||||||||    
T  17037623 ttacctaacaattgttcaaatgttactaaatttaattagtaacatttttcttgatttagttacgattttcaagtgttacta 17037543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 225
Target Start/End: Original strand, 5078984 - 5079164
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||| | |   ||||| ||||||||||||||||||| ||| || |||||||||| |||||| |  |||||||||| ||  |    
T  5078984 tgatacaaaaagtgttacaataaggtaccatttgcaacactttttgattgttacagatagtactataaaatgtaactaaaacactttagtaacacgggct 5079083  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||||| ||||| |||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  5079084 ttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagttacaattttcaagtgttacta 5079164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 225
Target Start/End: Complemental strand, 7411004 - 7410824
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||| | |   ||||| ||||||||||||||||||||||  || |||||||||| |||||| |  |||||||||| ||  |    
T  7411004 tgatacaaaaagtgttacaataaggtaccatttgcaacactttttgattgttacaaattgtactataaaatgtaactaaaacactttagtaacacgggct 7410905  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||||| ||||| |||| ||||||| ||| |||||||||||| |||||| |||||||||||| || ||||||||    
T  7410904 ttacctaacaattgttcaagtgttgctaaatttaattagtaacattttttttgatttagttacaattttgaaatgttacta 7410824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 126 - 246
Target Start/End: Original strand, 9354390 - 9354510
Alignment:
Q  126 ctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||||| ||  ||||||||||||||  |||||||||| |||||| ||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  9354390 ctttttagtaacatgggctttacctaacaattgctcaaatgttattaaatttaattagtaacatttttcttgattcagttacaattttcaattgttacta 9354489  T
Q  226 gatcttaattatgttgtagtg 246  Q
     |||| ||| |||||||||||    
T  9354490 aatctcaatcatgttgtagtg 9354510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 56 - 246
Target Start/End: Complemental strand, 31571203 - 31571008
Alignment:
Q  56 gtgttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaaca 154  Q
    |||||||||||||| || ||||||||||| ||||||| ||||||  |||||| |||| ||||   ||||| || |||||||||| ||  |||||||||||    
T  31571203 gtgttacaataatgtaacattttgcgacattttttgaatgttaccgataatactatataatggatctaaagctctttagtaacatgggttttacctaaca 31571104  T
Q  155 attattcaaat----gttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    ||| | || ||    |||||||| || |||||||||||||||||||| || | | ||||||||||||||||||||||| | |||||||||||||||    
T  31571103 attgtacatatatatgttactaattttaatcagtaacatttttcttgttttaataacaattttcaagtgttactagatgtcaattatgttgtagtg 31571008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 23679584 - 23679445
Alignment:
Q  82 cactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatc 181  Q
    |||||||| |||||||||||||||| |||||||||| |||||| || |||||||||| |   |||| |||| |||| ||| |||||| | ||||| |||     
T  23679584 cactttttaattgttacaaataatactataaaatgtaactaaaactctttagtaacacgaactttatctaataattgttcgaatgttgcaaaatttaatt 23679485  T
Q  182 agtaacatttttcttgattaagttacaattttcaagtgtt 221  Q
    | ||||||||||||||||| ||||||||||||||||||||    
T  23679484 aataacatttttcttgatttagttacaattttcaagtgtt 23679445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 23855227 - 23855366
Alignment:
Q  82 cactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatc 181  Q
    |||||||| |||||||||||||||| |||||||||| |||||| || |||||||||| |   |||| |||| |||| ||| |||||| | ||||| |||     
T  23855227 cactttttaattgttacaaataatactataaaatgtaactaaaactctttagtaacacgaactttatctaataattgttcgaatgttgcaaaatttaatt 23855326  T
Q  182 agtaacatttttcttgattaagttacaattttcaagtgtt 221  Q
    | ||||||||||||||||| ||||||||||||||||||||    
T  23855327 aataacatttttcttgatttagttacaattttcaagtgtt 23855366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 126 - 246
Target Start/End: Original strand, 9333562 - 9333682
Alignment:
Q  126 ctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    |||||||||||||  |  ||||||||||||||  ||||||||||||||||| ||| |||||||||||||||||||  |||||||||||||| |||||| |    
T  9333562 ctttttagtaacatcgactttacctaacaattgctcaaatgttactaaatttaattagtaacatttttcttgattttgttacaattttcaattgttacaa 9333661  T
Q  226 gatcttaattatgttgtagtg 246  Q
     |||| ||| |||||||||||    
T  9333662 aatctcaatcatgttgtagtg 9333682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 31068982 - 31069062
Alignment:
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    |||||||||||||| ||||| |||||||||||| ||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  31068982 tttacctaacaattgttcaa-tgttactaaatttaattagtaacatttttcttgatttagttacaatttttaagtgttacta 31069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 18191886 - 18191970
Alignment:
Q  162 aaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    ||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||||| |||||||| |||| |||||| ||||||||    
T  18191886 aaatgttactaaatttaattagtaacatttttcttaatttagttacaattttcaattgttactaaatctcaattattttgtagtg 18191970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 146 - 246
Target Start/End: Complemental strand, 10869516 - 10869417
Alignment:
Q  146 tacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagt 245  Q
    |||||||||||| |||||||||||||||||| ||| ||||||| ||||| ||||| || ||||||||| || |||  |||||||| ||||||||||||||    
T  10869516 tacctaacaattgttcaaatgttactaaatttaattagtaacaattttcatgatttag-tacaatttttaattgtatctagatctcaattatgttgtagt 10869418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 247
Target Start/End: Original strand, 38449889 - 38450088
Alignment:
Q  46 gatacaaaatgtgttacaataatga-atattttgcgacactttttgattgttacaaataataatataaaatgtgactaaat----ctttttagtaacaag 140  Q
    ||||||||| ||||||||| ||||| | |||||| ||||  |||| | ||||||| ||||||  ||||||||| ||||| |    || |||||||||| |    
T  38449889 gatacaaaaagtgttacaaaaatgatacattttgtgacaactttttaatgttacatataataccataaaatgtaactaattaaagctgtttagtaacatg 38449988  T
Q  141 gcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgtt 240  Q
       |||||||||||||||| ||||||||||| | ||       |||||||||||||||||  || |||||||||| |||||||||||| | |||||||||    
T  38449989 agctttacctaacaattatacaaatgttactgattt-------taacatttttcttgatttggtaacaattttcatgtgttactagatgtcaattatgtt 38450081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 37233156 - 37233061
Alignment:
Q  101 ataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttctt 196  Q
    |||||| |||||||||| ||| || ||||||||||||| ||  | ||||||||||||  ||||||||||||||||| ||| |||||| ||||||||    
T  37233156 ataatactataaaatgttactgaaactttttagtaacacggactatacctaacaattgctcaaatgttactaaatttaattagtaacttttttctt 37233061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 17535411 - 17535350
Alignment:
Q  185 aacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    |||||||||||||||| ||||||| |||||||  |||||||||||| |||| ||||||||||    
T  17535411 aacatttttcttgatttagttacatttttcaaccgttactagatctcaattttgttgtagtg 17535350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 194
Target Start/End: Complemental strand, 42076171 - 42076078
Alignment:
Q  101 ataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttc 194  Q
    |||||| |||||||| |  || || ||||||||||||| ||  |||| ||||||||| |||||||||||||||||| ||| ||||||| |||||    
T  42076171 ataatactataaaatattcctgaagctttttagtaacatggactttatctaacaattgttcaaatgttactaaatttaattagtaacaattttc 42076078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 210
Target Start/End: Original strand, 40401987 - 40402094
Alignment:
Q  103 aataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaa 202  Q
    |||| ||||||||||  || || |||||||| ||||  |  |||||||||||||| |||||| || |||||||| ||| ||||||||||||||| ||| |    
T  40401987 aatactataaaatgttgctgaagctttttagcaacacagactttacctaacaattgttcaaacgtaactaaatttaattagtaacatttttctttattta 40402086  T
Q  203 gttacaat 210  Q
    || |||||    
T  40402087 gtcacaat 40402094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 246
Target Start/End: Complemental strand, 15160483 - 15160366
Alignment:
Q  129 tttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacattt-ttcttgattaagttacaattttcaagtgttactaga 227  Q
    |||||||||| ||  ||||||||||| |||| |||||||||| | ||| ||  |||||||||| || |||||| | |||||||||| ||||||||||| |    
T  15160483 tttagtaacatgggctttacctaacatttat-caaatgttacaagatttaaatagtaacatttgtttttgatttatttacaattttgaagtgttactaaa 15160385  T
Q  228 tcttaattatgttgtagtg 246  Q
    ||| |  ||||||||||||    
T  15160384 tctcatatatgttgtagtg 15160366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 42076086 - 42076044
Alignment:
Q  206 acaattttcaagtgttactagatcttaattatgttgtagtgtt 248  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  42076086 acaattttcaattgttactagatctcaattatgttgtagtgtt 42076044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 12004567 - 12004630
Alignment:
Q  182 agtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    ||||||||||||||||||| ||||| || |||||| |||||||| || | |||||||||||||||    
T  12004567 agtaacatttttcttgatttagttagaa-tttcaattgttactaaatttcaattatgttgtagtg 12004630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 30655195 - 30655298
Alignment:
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacattt-ttcttgattaagttacaattttcaagtgttactagatcttaattatgttgt 242  Q
    ||||||||||| |||| |||||||||| | ||  ||  |||||||||| || |||||| |||||||||||| ||||||||||| |||| |  ||||||||    
T  30655195 tttacctaacatttat-caaatgttacaagatctaaatagtaacatttgtttttgatttagttacaattttgaagtgttactaaatctcatatatgttgt 30655293  T
Q  243 agtgt 247  Q
    |||||    
T  30655294 agtgt 30655298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 19615102 - 19615154
Alignment:
Q  195 ttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtgt 247  Q
    |||||| |||||||||||| ||||||||||| ||||||  ||||| |||||||    
T  19615102 ttgatttagttacaattttgaagtgttactaaatcttatatatgtagtagtgt 19615154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 7e-59; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 45 - 247
Target Start/End: Complemental strand, 28637084 - 28636881
Alignment:
Q  45 tgatacaaaatgtgttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggca 143  Q
    |||||||||| |||||||||||||| || ||| |||||||||||||||||||   | ||| || |||||||||| ||||||||| ||||| ||||  |      
T  28637084 tgatacaaaaagtgttacaataatgtaacattgtgcgacactttttgattgtcgtagatattactataaaatgtaactaaatctctttagcaacagtgac 28636985  T
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgta 243  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  28636984 tttacctaacaattattcaaatgttactaaattgaattagtaacatttttcttgatttagttacaatttttaaatgttactagatcttaattatgttgta 28636885  T
Q  244 gtgt 247  Q
    ||||    
T  28636884 gtgt 28636881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 34 - 246
Target Start/End: Complemental strand, 897646 - 897434
Alignment:
Q  34 attgttattgatgatacaaaatgtgttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatcttttta 132  Q
    ||||||| || |||||||||| |||||||||||||| || ||||||||| | ||||| | |||||||||||||  |||||||||| |||| | || ||||    
T  897646 attgttactggtgatacaaaaagtgttacaataatgtaacattttgcgagaattttttaatgttacaaataattgtataaaatgtaactatagctcttta 897547  T
Q  133 gtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatctta 232  Q
    |||||| |  | ||||||||||||| ||||| |||||||||||| ||| || |||||||||||| ||| ||| ||||||||||| ||| |||| ||||||    
T  897546 gtaacatga-acttacctaacaattgttcaattgttactaaatttaattaggaacatttttcttcatttagtaacaattttcaactgtaactatatctta 897448  T
Q  233 attatgttgtagtg 246  Q
    ||||||||||||||    
T  897447 attatgttgtagtg 897434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 36 - 247
Target Start/End: Complemental strand, 18308338 - 18308126
Alignment:
Q  36 tgttattgatgatacaaaatgtgttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagt 134  Q
    |||||| | |||||||||| |||||||||||||| || |||||| |||||||||||| ||||||||| |||| |||||||||| |||||| |  || |||    
T  18308338 tgttatcggtgatacaaaaagtgttacaataatgtaacattttgtgacactttttgaatgttacaaacaatactataaaatgtaactaaagcccttcagt 18308239  T
Q  135 aaca-aggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaa 233  Q
    |||| |||| |||||||||||||| |  |||||||| ||| |  |||| |||||||||||||||||| ||| ||||||||||| ||||||||||| | ||    
T  18308238 aacacaggc-tttacctaacaattgtagaaatgttaataattgtaatctgtaacatttttcttgatttagtaacaattttcaaatgttactagatgtcaa 18308140  T
Q  234 ttatgttgtagtgt 247  Q
    ||||||| ||||||    
T  18308139 ttatgttttagtgt 18308126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 34 - 225
Target Start/End: Complemental strand, 51758944 - 51758753
Alignment:
Q  34 attgttattgatgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttag 133  Q
    ||||||| || |||||||||| |||||||||||||| |   ||||| ||||||||| ||||||||| |||||| |||||||||| |||||| || |||||    
T  51758944 attgttactggtgatacaaaaagtgttacaataatgtaacatttgcaacactttttaattgttacagataatactataaaatgtaactaaaactctttag 51758845  T
Q  134 taacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||| | |   ||||||||| |||| ||| | |||| ||||||| ||| | ||||||||||||||||| ||||||||||||||| ||||||||    
T  51758844 taatacgagctttacctaataattgttcgagtgttgctaaatttaattactaacatttttcttgatttagttacaattttcaaatgttacta 51758753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 144 - 246
Target Start/End: Original strand, 5911683 - 5911785
Alignment:
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgta 243  Q
    |||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||| ||| |||| ||||||||    
T  5911683 tttacctaacaattgttcaagtgttactaaatttaatcagtaacatttttcttgatttagttaaaattttcaagtgttactatatcataatcatgttgta 5911782  T
Q  244 gtg 246  Q
    |||    
T  5911783 gtg 5911785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 93 - 246
Target Start/End: Complemental strand, 12190084 - 12189931
Alignment:
Q  93 tgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttt 192  Q
    |||||| ||||||| |||||||  | |||||| || |||||||||| ||  |||||||||||||| |||||||||||||||||| ||| ||||| |||||    
T  12190084 tgttactaataatactataaaaaattactaaaactctttagtaacacgggctttacctaacaattgttcaaatgttactaaatttaattagtaatatttt 12189985  T
Q  193 tcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    |||||||| ||||||| |||| || |||| |||  ||| |||||||||||||||    
T  12189984 tcttgatttagttacattttttaattgtttctaattctcaattatgttgtagtg 12189931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 16222874 - 16222778
Alignment:
Q  129 tttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    |||||||||| ||  |||||||||||||||||||| ||||||||||||  || ||||||||||||||||||| ||||||||||||||| ||||||||    
T  16222874 tttagtaacacgggctttacctaacaattattcaagtgttactaaattttattagtaacatttttcttgatttagttacaattttcaaatgttacta 16222778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 45 - 246
Target Start/End: Original strand, 39368558 - 39368761
Alignment:
Q  45 tgatacaaaatgtgttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaa-tgtgactaaatctttttagtaacaaggc 142  Q
    |||||||||| |||||||||||||| || ||||||||||||||||| | ||||||  |||||| ||||||| ||| ||| || || ||||||| || |      
T  39368558 tgatacaaaaagtgttacaataatgtaacattttgcgacactttttaaatgttactgataatactataaaaatgtaactgaagctctttagtagcatgtg 39368657  T
Q  143 atttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgt 242  Q
     ||| |||||||||| |  |||||| ||||| || ||| ||||||||||||||||||| ||| ||| |||||| | |||||||||| | ||||||||||     
T  39368658 ctttgcctaacaattgtataaatgtgactaattttaattagtaacatttttcttgatttagtaacatttttcatgggttactagatgtcaattatgttgc 39368757  T
Q  243 agtg 246  Q
    ||||    
T  39368758 agtg 39368761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 88 - 225
Target Start/End: Complemental strand, 1844089 - 1843953
Alignment:
Q  88 ttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaac 187  Q
    |||||||||||| |||||| |||||||||  | |||| |  || ||||||| ||  |||||||||||||| |||||||||||||||||| ||||||||||    
T  1844089 ttgattgttacagataatactataaaatgcaattaaagcccttcagtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaac 1843990  T
Q  188 atttttcttgattaagttacaattttcaagtgttacta 225  Q
    |||||||||  |  |||||||||||| |||||||||||    
T  1843989 atttttcttattccagttacaatttt-aagtgttacta 1843953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 37097374 - 37097440
Alignment:
Q  159 ttcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  37097374 ttcaaatgttactaaattttatcagtaacatttttcttgatttagttacaattttcaagtgttacta 37097440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 15214408 - 15214327
Alignment:
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    |||||| ||||||| ||||||| |||||||||| ||| ||||| ||||||||||||| |||| |||||||||||||||||||    
T  15214408 tttacccaacaattgttcaaatattactaaatttaattagtaaaatttttcttgatttagttgcaattttcaagtgttacta 15214327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 247
Target Start/End: Complemental strand, 17113006 - 17112903
Alignment:
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgta 243  Q
    |||| ||||||||| ||||| |||||| ||||| ||  ||||  ||||||||||||| ||| ||||||||||| | ||||||||| | ||||||||||||    
T  17113006 tttaactaacaattgttcaagtgttacaaaatttaactagtactatttttcttgatttagtaacaattttcaattattactagatttcaattatgttgta 17112907  T
Q  244 gtgt 247  Q
    ||||    
T  17112906 gtgt 17112903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 3399703 - 3399642
Alignment:
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagtt 205  Q
    |||||||||||||| |||||||||||||||||| ||| ||||||||||||| ||||| ||||    
T  3399703 tttacctaacaattgttcaaatgttactaaatttaattagtaacatttttcatgatttagtt 3399642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 13208708 - 13208621
Alignment:
Q  129 tttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaa 216  Q
    |||||||||| ||  |||||||||||||  ||||| || ||||||||| ||| ||||||||||||||| ||| | |||||||||||||    
T  13208708 tttagtaacacgggttttacctaacaatggttcaagtggtactaaatttaattagtaacatttttcttaatttaattacaattttcaa 13208621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 15204675 - 15204613
Alignment:
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagtta 206  Q
    |||||||||||||| ||||| |||||||||||| | | || |||||||||||||||| |||||    
T  15204675 tttacctaacaattgttcaagtgttactaaatttagttagcaacatttttcttgatttagtta 15204613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 15193979 - 15193919
Alignment:
Q  165 tgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||| |||||| ||| |||||||||||||||||||  ||| | |||||||||||||||||    
T  15193979 tgttaataaatttaattagtaacatttttcttgatttcgttgctattttcaagtgttacta 15193919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 10038903 - 10038948
Alignment:
Q  188 atttttcttgattaagttacaattttcaagtgttactagatcttaa 233  Q
    ||||||||||||| | |||||||||||||| ||||||| |||||||    
T  10038903 atttttcttgatttaattacaattttcaagcgttactatatcttaa 10038948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 6e-50; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 36 - 247
Target Start/End: Original strand, 26619014 - 26619224
Alignment:
Q  36 tgttattgatgatacaaaatgtgttacaataatgaat-attttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagt 134  Q
    |||||| | |||||||||| |||||||||||||| |  ||||||||||||||||||| |||||||||||||| ||| |||||| ||||||  | ||||||    
T  26619014 tgttatcggtgatacaaaaagtgttacaataatgtagcattttgcgacactttttgaatgttacaaataatactatcaaatgtaactaaagttctttagt 26619113  T
Q  135 aacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaat 234  Q
    ||||  | ||||||||| ||||| ||||||||||| |||||| ||||||||||||||||||||||| ||| |||| |||||||||||||||||| | |||    
T  26619114 aacataggatttaccta-caattgttcaaatgttaataaatttaatcagtaacatttttcttgatttagtaacaa-tttcaagtgttactagatgtcaat 26619211  T
Q  235 tatgttgtagtgt 247  Q
    |||||||||||||    
T  26619212 tatgttgtagtgt 26619224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 59 - 247
Target Start/End: Original strand, 26608472 - 26608661
Alignment:
Q  59 ttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaatt 157  Q
    ||||||||||| || ||||||||||||||||||||||||| | ||| || |||||||||  |||||| || |||||||||| ||  |||| |||||||||    
T  26608472 ttacaataatgtaacattttgcgacactttttgattgttatagatagtactataaaatgcaactaaagctctttagtaacatgggctttatctaacaatt 26608571  T
Q  158 attcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtgt 247  Q
     |||||||||||||||||| |||||||||||||||||||||||   | ||||||||||| ||||||||||| | ||||||||||||||||    
T  26608572 gttcaaatgttactaaatttaatcagtaacatttttcttgatttcataacaattttcaaatgttactagatgtcaattatgttgtagtgt 26608661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 36 - 247
Target Start/End: Original strand, 26621001 - 26621213
Alignment:
Q  36 tgttattgatgatacaaaatgtgttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagt 134  Q
    |||||| | |||||||| | ||||| |||||||| || |||||  |||||||||||| ||||||| |||||| |||||||||| |||||| || ||||||    
T  26621001 tgttatcggtgatacaacaagtgttgcaataatgtaacattttatgacactttttgaatgttacagataatactataaaatgtaactaaagctctttagt 26621100  T
Q  135 aacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaat 234  Q
    |||| ||| |||| ||||||||| || ||||||| ||||||| ||||||||||||||||||| ||| ||| ||||||||||||||||||||||| |  ||    
T  26621101 aacatggcttttatctaacaattgtttaaatgttgctaaatttaatcagtaacatttttcttaatttagtaacaattttcaagtgttactagatgtccat 26621200  T
Q  235 tatgttgtagtgt 247  Q
    || ||||||||||    
T  26621201 taagttgtagtgt 26621213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 80 - 244
Target Start/End: Complemental strand, 30089880 - 30089716
Alignment:
Q  80 gacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaa 179  Q
    |||||||||||| ||||| |||||||| |||||||||| |||||| || |||||||||| ||  ||| |||||||||| |||||||||||||||||  ||    
T  30089880 gacactttttgaatgttaaaaataatactataaaatgtaactaaagctctttagtaacatgggcttttcctaacaattgttcaaatgttactaaatataa 30089781  T
Q  180 tcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtag 244  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||| | |||||| ||||||    
T  30089780 tcagtaacatttttcttgatttagtaacagttttcaagtgttactagatgtcaattattttgtag 30089716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 225
Target Start/End: Original strand, 4685323 - 4685503
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||| | |   ||||||||||||||||||||||||| ||| || |||||||||| |||||| |  |||||||| | ||  |    
T  4685323 tgatacaaaaagtgttacaataaggtaccatttgcgacactttttgattgttacagatagtactataaaatgtaactaaaacactttagtaatacgggct 4685422  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||||| ||||| |||| ||||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  4685423 ttacctaacaattgttcaagtgttgctaaatttaattactaacatttttcttgatttagttacaattttcaagtgttacta 4685503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 9242404 - 9242580
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||||| |   ||||||||||||||| ||||||| | |||||| |||||||||| |||||| || |||||||||| ||  |    
T  9242404 tgatacaaaaagtgttacaataatgtaacatttgcgacactttttaattgttatagataatactataaaatgtaactaaaactctttagtaacatggact 9242503  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgtt 221  Q
    ||| ||||||||| ||||| |||||| ||||| ||| ||||||| ||||||||||| ||||||||||||||||||||    
T  9242504 ttatctaacaattgttcaagtgttacaaaatttaattagtaacaattttcttgatttagttacaattttcaagtgtt 9242580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 37 - 241
Target Start/End: Original strand, 20277270 - 20277476
Alignment:
Q  37 gttattgatgatacaaaatgtgttacaataatg-aatattttgcgacactttttg-attgttacaaataataatataaaatgtgactaaatctttttagt 134  Q
    ||||||| |||||||||| ||||| |||||||  || ||||||| ||| |||||  ||||||||| |||||| |||| ||||| |||||| || ||||||    
T  20277270 gttattggtgatacaaaaagtgtttcaataatataacattttgctacattttttttattgttacagataatactatataatgtaactaaagctctttagt 20277369  T
Q  135 aacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaat 234  Q
    |||| |   |||||||||||||| || ||||||||||||||| ||| | ||| |||||| |||||| ||||||||||||| ||||||||||| || ||||    
T  20277370 aacaggtgctttacctaacaattgtttaaatgttactaaatttaattaataatattttttttgatttagttacaattttcgagtgttactagttcataat 20277469  T
Q  235 tatgttg 241  Q
    |||||||    
T  20277470 tatgttg 20277476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 76 - 225
Target Start/End: Complemental strand, 10022273 - 10022124
Alignment:
Q  76 ttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaat 175  Q
    |||||||||||||| ||||||||| ||| ||||||||||||| ||||||  | |||||||||| |   |||||||||||||| ||||  ||||||||||     
T  10022273 ttgcgacactttttaattgttacagatagtaatataaaatgtaactaaaattctttagtaacacgagctttacctaacaattgttcatgtgttactaaac 10022174  T
Q  176 tgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    | ||| ||||||||||||  ||||| ||||||||||||||| ||||||||    
T  10022173 ttaattagtaacattttttctgatttagttacaattttcaattgttacta 10022124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 222
Target Start/End: Original strand, 26224935 - 26225075
Alignment:
Q  82 cactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatc 181  Q
    ||||||||||||||||||  || || |||||||||  |||||| || ||||||||||  |  ||||||||| |||| ||||| |||||||||||| |||     
T  26224935 cactttttgattgttacaggtagtattataaaatgaaactaaaactctttagtaacaccggctttacctaataattgttcaagtgttactaaatttaatt 26225034  T
Q  182 agtaacatttttcttgattaagttacaattttcaagtgtta 222  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  26225035 agtatcatttttcttgatttagttacaattttcaagtgtta 26225075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 225
Target Start/End: Original strand, 26205372 - 26205515
Alignment:
Q  82 cactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatc 181  Q
    ||||||||||||||||||| || || ||| |||||  |||||| || ||||||||||     |||||||| ||||| ||||| |||||||||||| |||     
T  26205372 cactttttgattgttacaagtagtactatcaaatgaaactaaaactctttagtaacaccagctttacctaccaatttttcaagtgttactaaatttaatt 26205471  T
Q  182 agtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||    
T  26205472 agtaacatttttcttgatttagttataattttcaagtgtcacta 26205515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 79 - 246
Target Start/End: Complemental strand, 3234473 - 3234306
Alignment:
Q  79 cgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaa-ttattcaaatgttactaaattg 177  Q
    ||||| ||||||| |||||| |||||||  || |||||| ||| || || |||||||||| ||  ||||||||| || ||  |||||||||||||||||     
T  3234473 cgacattttttgaatgttactaataatac-attaaatgttactgaagctatttagtaacacggactttacctaataaattggtcaaatgttactaaatta 3234375  T
Q  178 aatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    | | |||| ||||||| || ||| ||||||| ||||||| |||||||| |||||||||||| |||||||    
T  3234374 atttagtaccatttttttttatttagttacatttttcaactgttactaaatcttaattatgctgtagtg 3234306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 45 - 237
Target Start/End: Complemental strand, 8241778 - 8241586
Alignment:
Q  45 tgatacaaaatgtgttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggca 143  Q
    |||||||||| |||||||||||||  || || || || |||||||| ||| ||||  |||||| ||||| |||| ||| ||  | |||| ||||| ||      
T  8241778 tgatacaaaaagtgttacaataatctaacatattacggcacttttttatttttacggataatattataatatgtaactgaagttctttaataacatggat 8241679  T
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattat 237  Q
    |||| ||||||| | ||||||| ||| |||||| ||||||||||| ||||||| ||| ||||||||||| ||||| |||||| ||| |||||||    
T  8241678 tttatctaacaactgttcaaatattattaaattcaatcagtaaca-ttttcttcatttagttacaatttccaagtattactaaatcataattat 8241586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 14803120 - 14803181
Alignment:
Q  185 aacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    |||||||||||||||| ||||||| |||||||  |||||||||||| |||| ||||||||||    
T  14803120 aacatttttcttgatttagttacatttttcaaccgttactagatctcaattttgttgtagtg 14803181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 15250114 - 15250175
Alignment:
Q  185 aacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    |||||||||||||||| ||||||| |||||||  |||||||||||| |||| ||||||||||    
T  15250114 aacatttttcttgatttagttacatttttcaaccgttactagatctcaattttgttgtagtg 15250175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 16170352 - 16170275
Alignment:
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgtt 221  Q
    |||||||||||||| || || |||||||||||| ||| ||||||| ||||  |||||  |||||||||||||||||||    
T  16170352 tttacctaacaattgtttaagtgttactaaatttaattagtaacactttttgtgatttggttacaattttcaagtgtt 16170275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 16086611 - 16086519
Alignment:
Q  101 ataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacattttt 193  Q
    |||||| |||||||||| ||| || || || ||||||| |   |||||||||||||||||||||||||| |||||| ||| ||||||| ||||    
T  16086611 ataatactataaaatgttactgaagctattaagtaacatgagctttacctaacaattattcaaatgttattaaatttaattagtaacagtttt 16086519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 3374589 - 3374523
Alignment:
Q  34 attgttattgatgatacaaaatgtgttacaataatg-aatattttgcgacactttttgattgttaca 99  Q
    ||||||| || |||||||||| ||||||||||||||  ||||||||||| ||||||||| |||||||    
T  3374589 attgttactggtgatacaaaaagtgttacaataatgtgatattttgcgatactttttgaatgttaca 3374523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 3374383 - 3374326
Alignment:
Q  143 atttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgatt 200  Q
    |||||| | |||||| ||||||||||||| |||| ||||| |||||||||||||||||    
T  3374383 atttacttgacaattgttcaaatgttacttaatttaatcaataacatttttcttgatt 3374326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 2233461 - 2233417
Alignment:
Q  129 tttagtaacaaggcatttacctaacaattattcaaatgttactaa 173  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||||    
T  2233461 tttagtaacatggcatatacctaacacttattcaaatgttactaa 2233417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 246
Target Start/End: Original strand, 24731759 - 24731876
Alignment:
Q  129 tttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacattt-ttcttgattaagttacaattttcaagtgttactaga 227  Q
    |||||||||| ||  ||||||||||| |||| |||||||||| | ||  ||  |||||||||| || |||||| | |||||||||| ||||||||||| |    
T  24731759 tttagtaacatgggttttacctaacatttat-caaatgttacaagatctaaatagtaacatttatttttgatttaattacaattttgaagtgttactaaa 24731857  T
Q  228 tcttaattatgttgtagtg 246  Q
    ||| |  ||||||||||||    
T  24731858 tctcatatatgttgtagtg 24731876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 2e-47; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 34 - 225
Target Start/End: Original strand, 17634380 - 17634571
Alignment:
Q  34 attgttattgatgatacaaaatgtgttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatcttttta 132  Q
    |||||||||| ||||||| || |||||||||||||| |||| ||||||||||||||||||||||||| ||| || |||||||||| ||||||| | ||||    
T  17634380 attgttattggtgatacataaagtgttacaataatgtaata-tttgcgacactttttgattgttacagatagtactataaaatgtaactaaatttcttta 17634478  T
Q  133 gtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    |||||| ||  |||||||| ||||| ||||| ||||| |||||| ||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  17634479 gtaacacgggctttacctatcaattgttcaagtgttattaaatttaattagtaacatttttcttgatttagttacaattttcaaatgttacta 17634571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 45 - 223
Target Start/End: Original strand, 45356032 - 45356210
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||| | |   ||||||||||||||||||||||||| ||| || |||||||||| |||||| |  |||||||||| ||  |    
T  45356032 tgatacaaaaagtgttacaataaggtaccatttgcgacactttttgattgttacagatagtactataaaatgtaactaaaacactttagtaacacgggct 45356131  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttac 223  Q
    ||||||||||||| ||||| |||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||    
T  45356132 ttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagttacaattttcaagtgttac 45356210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 45 - 246
Target Start/End: Original strand, 5650864 - 5651066
Alignment:
Q  45 tgatacaaaatgtgttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggca 143  Q
    |||||||||| |||||||||||||| || |||||| |||||| ||||| ||||| | ||||||  ||||||||  |||||| |||||| |||||||||      
T  5650864 tgatacaaaaagtgttacaataatgtaacattttgtgacactatttgaatgttatagataataccataaaatgcaactaaagcttttttgtaacaagggt 5650963  T
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgta 243  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||| | | |||||||||||||||  | || |||||||||| |    
T  5650964 tttacctaacaattgttcaaatgttgctaaattgaattagtaacatttttcttgatttagtaatagttttcaagtgttactgaaactcaattatgttgca 5651063  T
Q  244 gtg 246  Q
    |||    
T  5651064 gtg 5651066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 45 - 246
Target Start/End: Complemental strand, 14997802 - 14997600
Alignment:
Q  45 tgatacaaaatgtgttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggca 143  Q
    |||||||||| |||||||||||||| ||| |||||||||| ||||||| |||||||  ||||| ||||||| || |||||| || |||||||||| ||      
T  14997802 tgatacaaaaagtgttacaataatgtaatgttttgcgacattttttgaatgttacagttaatactataaaaggtaactaaagctctttagtaacatgggt 14997703  T
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgta 243  Q
    |||||||||||||| | ||||||||||||| || || |||||||||||||||||| | ||| | ||||||||||||| ||||||| | ||| ||||||||    
T  14997702 tttacctaacaattctacaaatgttactaattttaaccagtaacatttttcttgaattagtaataattttcaagtgtcactagatgtcaatcatgttgta 14997603  T
Q  244 gtg 246  Q
    |||    
T  14997602 gtg 14997600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 45 - 245
Target Start/End: Complemental strand, 29345613 - 29345411
Alignment:
Q  45 tgatacaaaatgtgttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctt-tttagtaacaaggc 142  Q
    |||||||| | |||||||||||||| || ||||||| |||| || |||||||||||||||||| |||||||||| ||||||  || |||||||| | ||     
T  29345613 tgatacaagaagtgttacaataatgtaacattttgcaacacattctgattgttacaaataatactataaaatgtaactaaagtttgtttagtaagagggg 29345514  T
Q  143 atttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgt 242  Q
     |||||||||||||| |||||| ||||||||||| ||| ||||| ||||||||||||| ||||||||||||| ||||||||| | || ||||||| ||||    
T  29345513 ctttacctaacaattgttcaaaggttactaaatttaattagtaatatttttcttgatttagttacaattttcgagtgttactggttcataattatattgt 29345414  T
Q  243 agt 245  Q
    |||    
T  29345413 agt 29345411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 19369830 - 19370006
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||||| |   ||||||||||||||| ||||||||| |||||| |||||||||| |||||| || |||||||||| ||  |    
T  19369830 tgatacaaaaagtgttacaataatgtaacatttgcgacactttttaattgttacagataatactataaaatgtaactaaaactctttagtaacacggact 19369929  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgtt 221  Q
    ||| ||||||||| ||| | |||| | ||||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  19369930 ttatctaacaattgttcgagtgttgcaaaatttaattagtaacatttttcttgatttagttacaattttcaagtgtt 19370006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 225
Target Start/End: Complemental strand, 25638987 - 25638807
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||| | |   ||||||||| ||||||||||||||  ||| || |||||||||| |||||| |  |||||||||| ||  |    
T  25638987 tgatacaaaaagtgttacaataaggtaccatttgcgacattttttgattgttacggatagtactataaaatgtaactaaaacactttagtaacatgggtt 25638888  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||||| ||||| |||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  25638887 ttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagttacaattttcaagtgttacta 25638807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 45 - 221
Target Start/End: Complemental strand, 19448628 - 19448452
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||||| |   ||||||||||||||| ||||||||| |||||| |||||||| | |||||| || |||||||||| ||  |    
T  19448628 tgatacaaaaagtgttacaataatgtaacatttgcgacactttttaattgttacagataatactataaaatataactaaaactctttagtaacacggact 19448529  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgtt 221  Q
    ||| ||||||||| ||| | |||| | ||||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  19448528 ttatctaacaattgttcgagtgttgcaaaatttaattagtaacatttttcttgatttagttacaattttcaagtgtt 19448452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 19532448 - 19532624
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||||| |   ||||||||||||||| ||||||||| |||||| |||||||| | |||||| || |||||||||| ||  |    
T  19532448 tgatacaaaaagtgttacaataatgtaacatttgcgacactttttaattgttacagataatactataaaatataactaaaactctttagtaacacggact 19532547  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgtt 221  Q
    ||| ||||||||| ||| | |||| | ||||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  19532548 ttatctaacaattgttcgagtgttgcaaaatttaattagtaacatttttcttgatttagttacaattttcaagtgtt 19532624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 45 - 225
Target Start/End: Original strand, 28248999 - 28249175
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||| | |   |||||||||||||||||||||||||     || |||||||||| |||||| |  |||||||||| ||  |    
T  28248999 tgatacaaaaagtgttacaataaggtaccatttgcgacactttttgattgttacag----tactataaaatgtaactaaaacactttagtaacacgggct 28249094  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||||| ||||| |||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  28249095 ttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagttacaattttcaagtgttacta 28249175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 34 - 225
Target Start/End: Complemental strand, 5528934 - 5528743
Alignment:
Q  34 attgttattgatgatacaaaatgtgttacaataatgaatat-tttgcgacactttttgattgttacaaataataatataaaatgtgactaaatcttttta 132  Q
    ||||||| | ||||||||||| ||||||||||||||  ||| ||||||||||||||| | ||||||| |||||| | |||||||| |||||| || ||||    
T  5528934 attgttactaatgatacaaaaagtgttacaataatgt-tatatttgcgacactttttaactgttacagataatactgtaaaatgtaactaaaactcttta 5528836  T
Q  133 gtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||  |  |||| ||||||||| ||  | |||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  5528835 gtaacacagactttatctaacaattgtttgagtgttgctaaatttaattagtaacatttttcttgatttagttacaattttcaagtgttacta 5528743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 225
Target Start/End: Complemental strand, 25637823 - 25637644
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||||| |   ||||| ||||||||| |||||||||| ||||| |||||||||| ||||||  | |||||||||| ||  |    
T  25637823 tgatacaaaaagtgttacaataatgtagcatttgcaacactttttaattgttacaa-taatactataaaatgtaactaaaattctttagtaacacgggct 25637725  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||||| ||| | |||| ||||||| ||| ||||||| ||||||| ||| ||||||||||||||||||||||||    
T  25637724 ttacctaacaattgttcgagtgttgctaaatttaattagtaacagttttcttaatttagttacaattttcaagtgttacta 25637644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 6801736 - 6801951
Alignment:
Q  37 gttattgatgatacaaaatgtgttacaataatg-aatattttgcgaca-----ctttttgattgttacaaataataatataaaatgtgactaaatctttt 130  Q
    |||| ||||||||||||| |||||||||||||| || |||||||||||     |||||| | |||||||  ||||| | |||||||| |||||| || ||    
T  6801736 gttactgatgatacaaaaagtgttacaataatgtaacattttgcgacagtacacttttttaatgttacagctaatactctaaaatgtaactaaaactctt 6801835  T
Q  131 tagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatct 230  Q
    |||||||| ||  |||||||||||||| ||||| |||||||||||| ||| |||||||||||| |||||| ||| | | |||||||||||||||| ||||    
T  6801836 tagtaacaggggctttacctaacaattgttcaactgttactaaatttaattagtaacatttttattgatttagtaatagttttcaagtgttactaaatct 6801935  T
Q  231 taattatgttgtagtg 246  Q
     |  ||||||||||||    
T  6801936 catctatgttgtagtg 6801951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 107 - 246
Target Start/End: Complemental strand, 6403711 - 6403572
Alignment:
Q  107 atataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagtta 206  Q
    ||||||||||| ||| || ||||||| ||||| ||  ||||||||||||||  ||||||||||||||||| ||| ||||||||||||||| ||| |||||    
T  6403711 atataaaatgttactgaagctttttaataacacgggctttacctaacaattgctcaaatgttactaaatttaattagtaacatttttcttaatttagtta 6403612  T
Q  207 caattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    ||| |||||| |||||||| |||||||| |||||||||||    
T  6403611 caaatttcaattgttactaaatcttaatcatgttgtagtg 6403572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 192
Target Start/End: Complemental strand, 6223592 - 6223434
Alignment:
Q  36 tgttattgatgatacaaaatgtgttacaataatg-aatattttgcgacacttttt-gattgttacaaataataatataaaatgtgactaaatctttttag 133  Q
    ||||| || |||| ||||| |||||||||||||| || ||||||||||||||||| || ||||||| |||||| |||||| ||| |||||| || |||||    
T  6223592 tgttactggtgattcaaaaagtgttacaataatgtaacattttgcgacacttttttgaatgttacatataatattataaagtgtaactaaaactctttag 6223493  T
Q  134 taacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttt 192  Q
    ||||| |   |||||||||||||| | |||||||||||||||| |||||||||| ||||    
T  6223492 taacacgcgctttacctaacaattttacaaatgttactaaatttaatcagtaacgtttt 6223434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 85 - 246
Target Start/End: Complemental strand, 31347489 - 31347328
Alignment:
Q  85 tttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagt 184  Q
    ||||| ||||||||||||||| ||||||||||| ||| ||  |  |||||||||  | ||||| |||||||||  ||||||||||||||||| ||| |||    
T  31347489 ttttttattgttacaaataatgatataaaatgttactgaagatggttagtaacacaggatttatctaacaattgatcaaatgttactaaatttaattagt 31347390  T
Q  185 aacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    | ||||||||||||||  |||||||||||||| |||||||| || | ||| |||||| ||||    
T  31347389 agcatttttcttgatttggttacaattttcaattgttactaaatttcaatcatgttgcagtg 31347328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 126 - 247
Target Start/End: Complemental strand, 29553728 - 29553607
Alignment:
Q  126 ctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||||| |   |||| |||||||||  ||||||||| ||||||| ||| |||||||||||||||||||  |||||||||||||| ||||||||    
T  29553728 ctttttagtaacacgcgctttaactaacaattgctcaaatgttgctaaatttaattagtaacatttttcttgatttggttacaattttcaattgttacta 29553629  T
Q  226 gatcttaattatgttgtagtgt 247  Q
     |||| ||| ||||||||||||    
T  29553628 aatctcaatcatgttgtagtgt 29553607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 221
Target Start/End: Complemental strand, 18767097 - 18766921
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    ||||||||||  ||||||||||||| |   |||  |||||||||| ||||||  | |||||| |||||||||| |||||| || |||||||||| |   |    
T  18767097 tgatacaaaaaatgttacaataatgtaacatttatgacactttttaattgttctatataatactataaaatgtaactaaaactctttagtaacacgtact 18766998  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgtt 221  Q
    ||||||||||||| ||  | |||| | ||||| ||| | ||| ||||||||||||| ||||||||||||||||||||    
T  18766997 ttacctaacaattgtttgagtgttgcaaaatttaattaataatatttttcttgatttagttacaattttcaagtgtt 18766921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 5000757 - 5000661
Alignment:
Q  147 acctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgta 243  Q
    ||||||| |||  ||||||||||||||||| ||| ||||||| ||||  ||||  ||| ||||||||||| ||| ||||||||| ||||||||||||    
T  5000757 acctaactattgctcaaatgttactaaatttaattagtaacaattttgatgatgtagtaacaattttcaattgtaactagatctcaattatgttgta 5000661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 19341477 - 19341543
Alignment:
Q  182 agtaacattt-ttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtgt 247  Q
    |||||||||| || |||||| |||||||||||| || |||||||| ||||||  |||||||||||||    
T  19341477 agtaacatttatttttgatttagttacaattttgaattgttactaaatcttatatatgttgtagtgt 19341543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 7292885 - 7292813
Alignment:
Q  173 aattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    |||| ||| ||||||||||| | ||||| ||| ||||||||||||||||| || || | |||||||||||||||    
T  7292885 aatttaattagtaacatttt-catgattcagtaacaattttcaagtgttattaaatgtcaattatgttgtagtg 7292813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 29118587 - 29118650
Alignment:
Q  182 agtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    ||||||||| |||||| || ||  |||||||| |||||||||||||||| |||||| ||||||||    
T  29118587 agtaacattcttcttggtttagcaacaatttt-aagtgttactagatctcaattatattgtagtg 29118650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 4e-45; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 14669266 - 14669442
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||||| |   |||| |||||||||| |||||||||||||||| |||||||||| |||||| || |||||||||| ||  |    
T  14669266 tgatacaaaaagtgttacaataatgtaacatttgtgacactttttaattgttacaaataatactataaaatgtaactaaaactctttagtaacacggact 14669365  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgtt 221  Q
    ||||||||||||||||| | |||| | ||||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  14669366 ttacctaacaattattcgagtgttgcaaaatttaattagtaacatttttcttgatttagttacaattttcaagtgtt 14669442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 225
Target Start/End: Complemental strand, 12592013 - 12591833
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||||| |   ||||||||||||||| ||||||||| |||||| |||||| ||| |||||| || |||||||||| ||  |    
T  12592013 tgatacaaaaagtgttacaataatgtaacatttgcgacactttttaattgttacagataatactataaattgtaactaaaactctttagtaacacgggct 12591914  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||||| ||| |  ||||||||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  12591913 ttacctaacaattgttcgagcgttactaaatttaattactaacatttttcttgatttagttacaattttcaagtgttacta 12591833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 225
Target Start/End: Complemental strand, 16734985 - 16734805
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    ||||||| || |||||||||||| | |   ||||||| ||||||||||||||||| ||| || |||||||||| |||||| |  |||||||||| ||  |    
T  16734985 tgatacagaaagtgttacaataaggtaccatttgcgatactttttgattgttacagatagtactataaaatgtaactaaaacactttagtaacacgggct 16734886  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||||| |||||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  16734885 ttacctaacaattgttcaaatgttgctaaatttaattagtaacatttttcttgatttagttacaattttcaagtgttacta 16734805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 44 - 246
Target Start/End: Complemental strand, 1942751 - 1942548
Alignment:
Q  44 atgatacaaaatgtgttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggc 142  Q
    |||||||||||  ||||||||||||| || |||||||||||  |||| ||||||||| |||||| |||||||||| ||||||  | |||| |||||| |     
T  1942751 atgatacaaaagatgttacaataatgtaacattttgcgacatattttaattgttacagataatactataaaatgtaactaaagatatttaataacaaagg 1942652  T
Q  143 atttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgt 242  Q
     |||||||| |||||  |||||||||| ||||||  |||||||| ||||||||||||| |||||||||| |||| |||||| | ||||||||||||||||    
T  1942651 ttttacctagcaattgctcaaatgttattaaattttatcagtaatatttttcttgatttagttacaattatcaaatgttaccaaatcttaattatgttgt 1942552  T
Q  243 agtg 246  Q
    ||||    
T  1942551 agtg 1942548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 45 - 225
Target Start/End: Original strand, 11936687 - 11936867
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||| | |   ||||||||| ||||| ||||||||| ||| || |||||||||| |||||| |  |||||||||| ||  |    
T  11936687 tgatacaaaaagtgttacaataaggtaccatttgcgacatttttttattgttacagatagtactataaaatgtaactaaaacactttagtaacacgggct 11936786  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||| ||||||||| ||||| |||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  11936787 ttatctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagttacaattttcaagtgttacta 11936867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 45 - 225
Target Start/End: Complemental strand, 15361895 - 15361715
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| || ||||||||| | |   ||||| ||||||||||||||||||| ||| || |||||||||| |||||| | |||||||||||  |  |    
T  15361895 tgatacaaaaagttttacaataaggtaccatttgcaacactttttgattgttacagatagtactataaaatgtaactaaaacattttagtaacaccggct 15361796  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||||| ||||| |||| ||||||| ||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  15361795 ttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagttacaatttttaagtgttacta 15361715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 17719643 - 17719819
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||||| |   ||||||||||||||| ||||||||| |||||| |||||| ||| |||||| || |||||||||| ||  |    
T  17719643 tgatacaaaaagtgttacaataatgtaacatttgcgacactttttaattgttacagataatactataaattgtaactaaaactctttagtaacacggact 17719742  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgtt 221  Q
    ||| ||||||||| ||| | |||| | ||| | ||| ||||||||||||||||||| ||||||||||||||||||||    
T  17719743 ttatctaacaattgttcgagtgttgcaaaaattaattagtaacatttttcttgatttagttacaattttcaagtgtt 17719819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 45 - 213
Target Start/End: Original strand, 11948667 - 11948835
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||| | |   ||||||||| ||||| ||||||||| ||| || |||||||||| |||||| |  |||||||||| ||  |    
T  11948667 tgatacaaaaagtgttacaataaggtaccatttgcgacatttttttattgttacagatagtactataaaatgtaactaaaacactttagtaacacgggct 11948766  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaatttt 213  Q
    ||| ||||||||| ||||| |||| ||||||| ||| ||||||||||||||||||| ||||||||||||    
T  11948767 ttatctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagttacaatttt 11948835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 248
Target Start/End: Original strand, 29667899 - 29668040
Alignment:
Q  109 ataaaatgtgactaaatctttttagtaaca-aggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttc--ttgattaagtt 205  Q
    ||||||||| ||||||||| |||| ||||| | || |||||||||||||| |||||||||||||||||| ||| |||||||||||||  ||||||  |||    
T  29667899 ataaaatgttactaaatctctttaataacacaagc-tttacctaacaattgttcaaatgttactaaatttaattagtaacatttttcttttgatttcgtt 29667997  T
Q  206 acaattttcaagtgttactagatcttaattatgttgtagtgtt 248  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  29667998 acaattttcaattgttacaagatctcaattatgttgtagtgtt 29668040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 93 - 246
Target Start/End: Original strand, 4485533 - 4485686
Alignment:
Q  93 tgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttt 192  Q
    |||||| ||||||  |||| | ||| |||||| || |||| ||||| ||  |||||||||||||||||||||| |||||||||| ||| |||| ||||||    
T  4485533 tgttactaataattctatagattgttactaaaactatttaataacacggactttacctaacaattattcaaatattactaaatttaattagtaccatttt 4485632  T
Q  193 tcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
     ||||||| |||| || ||||||| || ||||||||||||||||||||||||||    
T  4485633 ccttgatttagttgcatttttcaactgatactagatcttaattatgttgtagtg 4485686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 45 - 242
Target Start/End: Original strand, 23904270 - 23904469
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaata--ttttgcgacactttttgattgttacaa-ataataatataaaatgtgactaaatctttttagtaacaagg 141  Q
    |||||||||| ||||||||||||||  ||  | ||| |||||||||||| |||||  | |||||| |||||| ||| | |||| || ||| |||| | ||    
T  23904270 tgatacaaaaagtgttacaataatgtttacatcttgtgacactttttgaatgttaagagataatactataaagtgtaa-taaacctcttttgtaagaggg 23904368  T
Q  142 catttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttg 241  Q
      |||||||||||||| |||||||||||||||||||| | |||||| |||||||| ||| |||  |||||||||||||||||||||||| ||||||||||    
T  23904369 gctttacctaacaattgttcaaatgttactaaattgatttagtaacttttttcttcatttagtagcaattttcaagtgttactagatctcaattatgttg 23904468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 101 - 225
Target Start/End: Complemental strand, 6684217 - 6684094
Alignment:
Q  101 ataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgatt 200  Q
    |||||| |||||||||| |||||| || |||||||||| ||  |||||||||||||  ||| | |||||||||||| ||| |||||||||||||||||||    
T  6684217 ataatactataaaatgtaactaaaactctttagtaacatggactttacctaacaatg-ttcgagtgttactaaatttaattagtaacatttttcttgatt 6684119  T
Q  201 aagttacaattttcaagtgttacta 225  Q
    ||||||||||||| |||||||||||    
T  6684118 aagttacaatttttaagtgttacta 6684094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 34 - 206
Target Start/End: Complemental strand, 10070845 - 10070674
Alignment:
Q  34 attgttattgatgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttag 133  Q
    ||||||| | ||||||||||| |||||||||||||| |   ||||||||||||||  |||||||||||||||| |||||||||| |||||| | ||||||    
T  10070845 attgttactaatgatacaaaaagtgttacaataatgtaacatttgcgacacttttaaattgttacaaataatactataaaatgtaactaaaac-ttttag 10070747  T
Q  134 taacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagtta 206  Q
    ||||| ||  ||||| |||||||||||  | ||||| |||||| ||| ||||||| |||| |||||| |||||    
T  10070746 taacacggactttacgtaacaattatttgagtgttattaaatttaattagtaacaattttgttgatttagtta 10070674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 249
Target Start/End: Original strand, 23264500 - 23264622
Alignment:
Q  129 tttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttca--agtgttactag 226  Q
    |||||||||| ||  |||||||||||||| ||| |||||||||||||| ||| ||||||| ||||||||||| ||| ||||||||||  | | |||||||    
T  23264500 tttagtaacacggattttacctaacaattgttcgaatgttactaaatttaattagtaacaattttcttgatttagtaacaattttcaatattcttactag 23264599  T
Q  227 atcttaattatgttgtagtgttt 249  Q
    |||| ||||||||||||||||||    
T  23264600 atctcaattatgttgtagtgttt 23264622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 111 - 243
Target Start/End: Original strand, 9631141 - 9631273
Alignment:
Q  111 aaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaat 210  Q
    ||||||| |||||| || | |||||||| ||  | | |||||||||| |||||||||||||||||| | | |||||| || ||||||||| ||| | | |    
T  9631141 aaaatgtaactaaaactctatagtaacaggggctatgcctaacaattgttcaaatgttactaaatttacttagtaacgttcttcttgatttagtaatagt 9631240  T
Q  211 tttcaagtgttactagatcttaattatgttgta 243  Q
    ||||||||||||||| |||| ||||||||||||    
T  9631241 tttcaagtgttactaaatctcaattatgttgta 9631273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 6673675 - 6673737
Alignment:
Q  182 agtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtag 244  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||| ||||||||||||||||||    
T  6673675 agtaacatttttcttgatttagttacatttttcaactgttactaaatcttaattatgttgtag 6673737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 15690519 - 15690438
Alignment:
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    |||| ||||||||| ||  | ||| |||||||| ||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  15690519 tttagctaacaattgtttgagtgtcactaaatttaattagtaacatttttcttgatttagttacaattttcaaatgttacta 15690438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 27969920 - 27970017
Alignment:
Q  128 ttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    |||||||||||  |  ||||||||||| || || ||||||| ||||||||||  |||||||| ||||||| ||  |||||||||||||| ||||||||    
T  27969920 ttttagtaacatagactttacctaacatttgttgaaatgttgctaaattgaaatagtaacatatttcttgctttggttacaattttcaaatgttacta 27970017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 4591229 - 4591138
Alignment:
Q  146 tacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattat 237  Q
    |||||||||||| | |||| |||| | | || |||| |||||||||||||||||| ||| | ||||||||| |||||||| || ||||||||    
T  4591229 tacctaacaattgtacaaaggttattgattttaatcggtaacatttttcttgatttagtaataattttcaaatgttactaaatgttaattat 4591138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 224
Target Start/End: Complemental strand, 34374971 - 34374826
Alignment:
Q  81 acactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattat--tcaaatgttactaaattga 178  Q
    ||||||| ||| ||||||  |||||| |||||||| | ||| || || ||||||||||  |  ||| |||||||||| |  ||||||||||| ||||  |    
T  34374971 acactttatgaatgttactcataatactataaaatattactcaaactctttagtaacacagattttgcctaacaattttgttcaaatgttacaaaatata 34374872  T
Q  179 atcagtaacatttttcttgattaagttacaattttcaagtgttact 224  Q
    || ||||||||||||||||||| | ||||| |||| || |||||||    
T  34374871 attagtaacatttttcttgatttaattacattttttaattgttact 34374826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 6346877 - 6346980
Alignment:
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacattt-ttcttgattaagttacaattttcaagtgttactagatcttaattatgttgt 242  Q
    ||||||||||| |||| |||||||||| ||||| ||  |||||||||| || |||||| |||||||||||| | ||||||||| |||| |  |||||||     
T  6346877 tttacctaacatttat-caaatgttacaaaatttaaatagtaacatttatttttgatttagttacaattttaatgtgttactaaatctcatatatgttgc 6346975  T
Q  243 agtgt 247  Q
    |||||    
T  6346976 agtgt 6346980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 244
Target Start/End: Original strand, 10935800 - 10935901
Alignment:
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttaca-attttcaagtgttactagatcttaattatgttgt 242  Q
    |||||||||||||| |||||||||||||  ||  ||| ||||||||||||| ||||| ||| | |  |||||||  |||| ||||||| |||| ||||||    
T  10935800 tttacctaacaattgttcaaatgttactggatataattagtaacatttttcatgatttagtaatattttttcaaacgttattagatctcaattttgttgt 10935899  T
Q  243 ag 244  Q
    ||    
T  10935900 ag 10935901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 14003903 - 14003851
Alignment:
Q  195 ttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtgt 247  Q
    |||||| |||||||||||| ||||||||||| ||||||  ||||| |||||||    
T  14003903 ttgatttagttacaattttgaagtgttactaaatcttatatatgtagtagtgt 14003851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 16722338 - 16722390
Alignment:
Q  195 ttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtgt 247  Q
    |||||| |||||||||||| ||||||||||| ||||||  ||||| |||||||    
T  16722338 ttgatttagttacaattttgaagtgttactaaatcttatatatgtagtagtgt 16722390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 45 - 223
Target Start/End: Complemental strand, 2550346 - 2550168
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaaca-aggca 143  Q
    |||||||||| |||||||||||| | |   ||||||||||||||||||||||||||||| || |||||||||| |||||| |  |||||||||| ||||     
T  2550346 tgatacaaaaagtgttacaataaggtaccatttgcgacactttttgattgttacaaatagtactataaaatgtaactaaaacactttagtaacacaggc- 2550248  T
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttac 223  Q
    |||||||||||||| ||||| |||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||    
T  2550247 tttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagttacaattttcaagtgttac 2550168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 221
Target Start/End: Complemental strand, 13846172 - 13845996
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||| | |   ||||||||||||||||||||||||| ||| || |||||||||| |||||| |  |||||||||| ||  |    
T  13846172 tgatacaaaaagtgttacaataaggtaccatttgcgacactttttgattgttacagatagtactataaaatgtaactaaaacactttagtaacacgggct 13846073  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgtt 221  Q
    ||||||||||||| ||||| |||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  13846072 ttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagttacaattttcaagtgtt 13845996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 225
Target Start/End: Original strand, 7407674 - 7407854
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||| | |   ||||||||||||||||||||||||  ||| || |||||||||| |||||| |  |||||||||| ||  |    
T  7407674 tgatacaaaaagtgttacaataaggtaccatttgcgacactttttgattgttactgatagtactataaaatgtaactaaaacactttagtaacacgggct 7407773  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||||| ||||| |||| ||||||| ||| ||||| ||||||||||||| ||||||||||||||||||||||||    
T  7407774 ttacctaacaattgttcaagtgttgctaaatttaattagtaatatttttcttgatttagttacaattttcaagtgttacta 7407854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 75 - 225
Target Start/End: Original strand, 1627897 - 1628047
Alignment:
Q  75 tttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaa 174  Q
    ||||||||||||||| ||||||||| |||||| |||||||||| |||||| || ||| |||||| ||  ||||| |||||||| ||||| ||||||||||    
T  1627897 tttgcgacactttttaattgttacatataatactataaaatgtaactaaaactcttttgtaacacggactttacttaacaattgttcaagtgttactaaa 1627996  T
Q  175 ttgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    || ||| ||||| ||||||||||||| ||||||||||||||||||||||||    
T  1627997 tttaattagtaatatttttcttgatttagttacaattttcaagtgttacta 1628047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 45 - 220
Target Start/End: Original strand, 2943135 - 2943309
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| ||||||||||| || | |  |||||||||||||| ||||||||| |||||| |||||||||| |||||| |  |||||||||| ||  |    
T  2943135 tgatacaaaaagtgttacaatagtgta-acattgcgacactttttaattgttacagataatactataaaatgtaactaaaacactttagtaacacgggct 2943233  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgt 220  Q
    | ||||||||||| ||| |||||||||||||| ||| ||||||||||||||||||| | |||||| ||||||||||    
T  2943234 taacctaacaattgttcgaatgttactaaatttaattagtaacatttttcttgatttaattacaaatttcaagtgt 2943309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 45 - 225
Target Start/End: Complemental strand, 1654756 - 1654576
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaaca-aggca 143  Q
    ||||||||||  ||||||||||| | |   ||||||||||||||||||||||||| ||| || |||||||||| |||||| |  |||| ||||| ||||     
T  1654756 tgatacaaaaaatgttacaataaggtaccatttgcgacactttttgattgttacagatagtactataaaatgtaactaaaacactttaataacacaggc- 1654658  T
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||| |||||||| ||||| |||| ||||||| ||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  1654657 tttacttaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagttacaattttcaattgttacta 1654576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 73 - 246
Target Start/End: Original strand, 9633390 - 9633563
Alignment:
Q  73 attttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttacta 172  Q
    ||||||||||| ||||||| ||||||| |||||  | |||||||| |||||| || |||||||||| ||  |||||||||||||| || |||||| ||||    
T  9633390 attttgcgacattttttgaatgttacatataatgctctaaaatgtaactaaaactctttagtaacaggggctttacctaacaattgtttaaatgtaacta 9633489  T
Q  173 aattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    |||| ||| |||||||||||| | |||| ||| | | |||||||||||||||| |||| |||||||||||||||    
T  9633490 aatttaattagtaacatttttttcgatttagtaatagttttcaagtgttactaaatctcaattatgttgtagtg 9633563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 248
Target Start/End: Original strand, 27259373 - 27259568
Alignment:
Q  45 tgatacaaaatgtgttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaa-ggc 142  Q
    |||||||||| |||||||||||||| || ||||| ||||||||||||| ||||||| |||||| | |||||||| |||||| || ||||||||||| ||     
T  27259373 tgatacaaaaagtgttacaataatgtaacattttacgacactttttgaatgttacagataatactctaaaatgtaactaaagctctttagtaacaaaggg 27259472  T
Q  143 atttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgt 242  Q
    |          |||| |||||||||||||||||| ||| ||||||||||| ||||||| ||| | | ||||||| |||||||| |||| |||||||||||    
T  27259473 a----------aattgttcaaatgttactaaatttaattagtaacattttgcttgatttagtaatagttttcaattgttactaaatctcaattatgttgt 27259562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 105 - 246
Target Start/End: Original strand, 16457311 - 16457452
Alignment:
Q  105 taatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagt 204  Q
    ||||||||||||| ||| || ||||||||||||| |   ||||||||||||||  ||||||||||||||||| ||| ||||||||||||||||||| |||    
T  16457311 taatataaaatgttactgaagctttttagtaacacgagctttacctaacaattgctcaaatgttactaaatttaattagtaacatttttcttgatttagt 16457410  T
Q  205 tacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    |||||||||||| ||||  |  |||| ||| |||||||||||    
T  16457411 tacaattttcaattgttgttgaatctcaatcatgttgtagtg 16457452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 28745167 - 28745043
Alignment:
Q  34 attgttattgatgatacaaaatgtgttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatcttttta 132  Q
    ||||||| ||||||||||||| |||||||||||||| || ||||||||||||||||||| |||||||||||||| | |||||||| |||||| || ||||    
T  28745167 attgttactgatgatacaaaaagtgttacaataatgtaaaattttgcgacactttttgaatgttacaaataatactctaaaatgtaactaaaactcttta 28745068  T
Q  133 gtaacaaggcatttacctaacaatt 157  Q
    |||||| |   ||||||||||||||    
T  28745067 gtaacatgtgctttacctaacaatt 28745043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 246
Target Start/End: Complemental strand, 5498619 - 5498457
Alignment:
Q  83 actttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatca 182  Q
    ||||| ||| |||||| |||||||  ||||||| | || ||| || ||||||||||  |  |||||||||||||| |||| | ||||||||||| ||| |    
T  5498619 actttatgaatgttactaataatac-ataaaatattaccaaaactctttagtaacataggttttacctaacaattgttcagaagttactaaatttaatta 5498521  T
Q  183 gtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    |||||||||||||||||| ||||||| |||| || |||||||| |||| |||||||||||||||    
T  5498520 gtaacatttttcttgatttagttacattttttaattgttactaaatctcaattatgttgtagtg 5498457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 103 - 245
Target Start/End: Complemental strand, 26707981 - 26707839
Alignment:
Q  103 aataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaa 202  Q
    |||| ||| |||||| ||| || || ||||||||||  |  |||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||| |    
T  26707981 aatactatgaaatgttactgaacctctttagtaacagagactttacctaacaattgttcaaatgttactaaatttaattagtaacatttttcttgattta 26707882  T
Q  203 gttacaattttcaagtgttactagatcttaattatgttgtagt 245  Q
    || || |||||||| ||||||| |||   |||||||| |||||    
T  26707881 gtaaccattttcaaatgttactcgattacaattatgtagtagt 26707839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 36035421 - 36035294
Alignment:
Q  93 tgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttt 192  Q
    ||||||| |||||| |||||||||| |||||| || |||||||||| |   |||||||||||||| | ||| |||||||||||| ||| ||||  |||||    
T  36035421 tgttacatataatactataaaatgtaactaaagctctttagtaacacgagctttacctaacaattgtacaattgttactaaatttaattagtattatttt 36035322  T
Q  193 tcttgattaagttacaattttcaagtgt 220  Q
    |||||||| |||  ||||||| ||||||    
T  36035321 tcttgatttagtaccaattttgaagtgt 36035294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 1613217 - 1613319
Alignment:
Q  129 tttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagat 228  Q
    |||||||||| ||  ||||||||| ||||  |||| |||||||||||| | | ||||||||||||||||||| ||||||| ||||||| |||||||| ||    
T  1613217 tttagtaacaggggctttacctaaaaattggtcaactgttactaaatttatttagtaacatttttcttgatttagttacatttttcaactgttactaaat 1613316  T
Q  229 ctt 231  Q
    |||    
T  1613317 ctt 1613319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 93 - 243
Target Start/End: Original strand, 27713407 - 27713554
Alignment:
Q  93 tgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttt 192  Q
    |||||| ||||||| |||||||| |  ||||| || ||||||||||  |  ||| ||||||||||||| ||||||||||||||| ||| ||||||   ||    
T  27713407 tgttactaataatactataaaatattgctaaaactatttagtaacataggttttgcctaacaattatttaaatgttactaaatttaattagtaac---tt 27713503  T
Q  193 tcttgattaagttacaattttcaagtgttactagatcttaattatgttgta 243  Q
    | |||| | ||||||| |||| || |||||||| |||| ||||||| ||||    
T  27713504 ttttgaattagttacattttttaaatgttactaaatctcaattatgctgta 27713554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 36035529 - 36035451
Alignment:
Q  168 tactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    |||||||||  |||||||  ||||||||||||  ||| |||||||| |||||||||||||| | |||||||||||||||    
T  36035529 tactaaatttgatcagtattatttttcttgatatagtaacaattttgaagtgttactagatgtcaattatgttgtagtg 36035451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 26735766 - 26735683
Alignment:
Q  93 tgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaatt 176  Q
    |||||| ||||||| ||| |||||| | | || || |||||||||| ||  |||||||||||||| ||||||||||||||||||    
T  26735766 tgttactaataatactatgaaatgttattgaagctctttagtaacatggattttacctaacaattgttcaaatgttactaaatt 26735683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 200
Target Start/End: Complemental strand, 35083127 - 35083001
Alignment:
Q  74 ttttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaa 173  Q
    ||||| |||||||||| | ||| | | |||||| |||||| ||| |||||| ||  ||  ||||||||  |||| ||||||||| ||||||| |||||||    
T  35083127 ttttgtgacactttttaaatgtcagagataatactataaattgtaactaaagctcatttctaacaagggttttatctaacaattgttcaaatattactaa 35083028  T
Q  174 attgaatcagtaacatttttcttgatt 200  Q
    ||| | | | |||||||||||||||||    
T  35083027 atttatttactaacatttttcttgatt 35083001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 36035079 - 36034998
Alignment:
Q  165 tgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    |||||||||||| ||| ||||  ||||||||||||| |||  ||||||| |||||| | ||||| | |||||||||||||||    
T  36035079 tgttactaaatttaattagtattatttttcttgatttagtaccaattttgaagtgtcattagatgtcaattatgttgtagtg 36034998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 23358526 - 23358579
Alignment:
Q  195 ttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtgtt 248  Q
    |||||| |||||||||||| ||||||||||| ||||||  ||||| ||||||||    
T  23358526 ttgatttagttacaattttgaagtgttactaaatcttatatatgtagtagtgtt 23358579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 23363347 - 23363400
Alignment:
Q  195 ttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtgtt 248  Q
    |||||| |||||||||||| ||||||||||| ||||||  ||||| ||||||||    
T  23363347 ttgatttagttacaattttgaagtgttactaaatcttatatatgtagtagtgtt 23363400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 45 - 223
Target Start/End: Complemental strand, 43600447 - 43600269
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||| | |   ||||||||||||||||||||||||| ||| || |||||||||| |||||| |  |||||||||| ||  |    
T  43600447 tgatacaaaaagtgttacaataaggtaccatttgcgacactttttgattgttacagatagtactataaaatgtaactaaaacactttagtaacacgggct 43600348  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttac 223  Q
    ||||||||||||| ||||| | || ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||    
T  43600347 ttacctaacaattgttcaagttttgctaaatttaattagtaacatttttcttgatttagttacaattttcaagtgttac 43600269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 47 - 225
Target Start/End: Original strand, 47065956 - 47066134
Alignment:
Q  47 atacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcattt 146  Q
    |||||||| ||||||||||| || |   ||||||||||||||||||||||||  ||| || |||||||||| |||||| || ||| |||||| ||  |||    
T  47065956 atacaaaaagtgttacaatagtgtaacatttgcgacactttttgattgttacggatagtactataaaatgtaactaaaactctttggtaacacgggcttt 47066055  T
Q  147 acctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||| ||||  |||||||||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  47066056 acctaacaattgttcaggtgttactaaatttaattactaacatttttcttgatttagttacaattttcaagtgttacta 47066134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 1684872 - 1685048
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| ||||||||||| || |   ||||||||||||||| ||||||||| |||||| |||||| ||| |||||| || |||||||||| ||  |    
T  1684872 tgatacaaaaagtgttacaatattgtaacatttgcgacactttttaattgttacagataatactataaattgtaactaaaactctttagtaacacggact 1684971  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgtt 221  Q
    ||| ||||||||| ||| | |||| | ||||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  1684972 ttatctaacaattgttcgagtgttgcaaaatttaattagtaacatttttcttgatttagttacaattttcaagtgtt 1685048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 129 - 246
Target Start/End: Original strand, 4881073 - 4881190
Alignment:
Q  129 tttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagat 228  Q
    |||||||||| ||  |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| |||    
T  4881073 tttagtaacacggactttacctaacaattatacaaatattactaaatttaatcagtaacatttttcttgatttagtaacaattttcaagtgttactggat 4881172  T
Q  229 cttaattatgttgtagtg 246  Q
     | |||||||||||||||    
T  4881173 gtcaattatgttgtagtg 4881190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 45 - 221
Target Start/End: Complemental strand, 1152224 - 1152048
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||||| |   |||| |||||||||| ||||||||| |||||| |||||| ||| |||||| || |||||||||| ||  |    
T  1152224 tgatacaaaaagtgttacaataatgtaacatttgagacactttttaattgttacagataatattataaactgtaactaaaactctttagtaacacggact 1152125  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgtt 221  Q
    ||| ||||||||| ||  | |||| | ||||| ||| ||||||||||||||| ||| ||||||||||||||||||||    
T  1152124 ttatctaacaattgtttgagtgttgcaaaatttaattagtaacatttttcttaatttagttacaattttcaagtgtt 1152048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 75 - 225
Target Start/End: Complemental strand, 53300501 - 53300351
Alignment:
Q  75 tttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaa 174  Q
    ||||||||||||||||||||||||  ||| ||  ||||||||| |||||| || ||| |||||| ||  |||||||||||||| || |  ||||||||||    
T  53300501 tttgcgacactttttgattgttacggatagtacgataaaatgtaactaaaactctttggtaacacgggctttacctaacaattgtttaggtgttactaaa 53300402  T
Q  175 ttgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    || ||| | ||||||||||||||||| | ||||||||||||||||||||||    
T  53300401 tttaattactaacatttttcttgatttaattacaattttcaagtgttacta 53300351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 4904125 - 4904253
Alignment:
Q  110 taaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaa 209  Q
    |||||||| |||||| |  ||||||||||||   |||||||||||||| | |||||||||||||||| ||||||||||||||||| ||||| ||| ||||    
T  4904125 taaaatgtaactaaagcactttagtaacaagtgctttacctaacaattgtacaaatgttactaaatttaatcagtaacatttttcatgatttagtaacaa 4904224  T
Q  210 ttttcaagtgttactagatcttaattatg 238  Q
    |||| |||||||||| ||| |||||||||    
T  4904225 tttttaagtgttactggatgttaattatg 4904253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 34 - 209
Target Start/End: Original strand, 21539181 - 21539355
Alignment:
Q  34 attgttattgatgatacaaaatgtgttacaataatga-atattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatcttttta 132  Q
    |||||||||| |||| ||||| |||||||||||||   | ||||||||| | ||| | |||||||| | ||||| || ||||||| ||||||||| ||||    
T  21539181 attgttattggtgatgcaaaaggtgttacaataatattacattttgcgatattttcttattgttacga-taatactaaaaaatgtaactaaatctcttta 21539279  T
Q  133 gtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaa 209  Q
    ||||||||| | ||| ||||||||| || ||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  21539280 gtaacaagg-acttatctaacaattgtttaaatgttactaaatttaatcagtaacattttccttgatttagttacaa 21539355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 101 - 246
Target Start/End: Original strand, 24558971 - 24559116
Alignment:
Q  101 ataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgatt 200  Q
    |||||| |||||||| | ||||||  | ||||||||||  ||  ||||||||||||  |||||||||||||||||| ||| |||||||||||||||||||    
T  24558971 ataatactataaaatatcactaaaattctttagtaacacagccgttacctaacaatcgttcaaatgttactaaatttaattagtaacatttttcttgatt 24559070  T
Q  201 aagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
     ||||||| |||| || |||||||| |||| ||||||||| |||||    
T  24559071 tagttacattttttaattgttactaaatctcaattatgttctagtg 24559116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 246
Target Start/End: Original strand, 37750911 - 37751110
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||||| |   ||||||||| ||||||| ||| | | |||||| |||||||||| |||||| ||| |||||||||  |  |    
T  37750911 tgatacaaaaagtgttacaataatgtaacatttgcgacattttttgaatgt-atagataatactataaaatgtaactaaagcttcttagtaacattggct 37751009  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtag 244  Q
    ||| |||||||||   ||||||||||| | || ||| |||||||||||| |||||| ||| ||||||||||  ||||||| ||| | |||||||||||||    
T  37751010 ttatctaacaattgcgcaaatgttactgattttaattagtaacattttt-ttgatttagtgacaattttcatatgttactggatgtcaattatgttgtag 37751108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 4923689 - 4923754
Alignment:
Q  181 cagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    |||||||||||||||||||| ||| |||||||| |||||||||| ||| |||||||||||||||||    
T  4923689 cagtaacatttttcttgatttagtaacaatttttaagtgttactggatgttaattatgttgtagtg 4923754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 27739693 - 27739807
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaata--ttttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggc 142  Q
    ||||||||||  ||||||||||||| | |  |||| ||||||||||||||| ||||| |||||| |||||||||| |||||| || || ||||||| ||     
T  27739693 tgatacaaaaaatgttacaataatgtaaaagtttttcgacactttttgattcttacagataatactataaaatgtaactaaagctcttcagtaacatggg 27739792  T
Q  143 atttacctaacaatt 157  Q
     ||||||||||||||    
T  27739793 ctttacctaacaatt 27739807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 48464118 - 48464049
Alignment:
Q  147 acctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaa 216  Q
    ||||||||||| |||||||||||||||||| ||| |||||||||||| || ||| ||| |||||||||||    
T  48464118 acctaacaattgttcaaatgttactaaatttaattagtaacatttttatttatttagtaacaattttcaa 48464049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 26075290 - 26075368
Alignment:
Q  165 tgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgta 243  Q
    |||||||||||| | | ||||||  ||||||||||  ||| ||||||||||| ||||| ||||| | ||||||||||||    
T  26075290 tgttactaaatttacttagtaaccattttcttgatctagtaacaattttcaattgttattagatttcaattatgttgta 26075368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 21317535 - 21317487
Alignment:
Q  128 ttttagtaacaaggcatttacctaacaattattcaaatgttactaaatt 176  Q
    |||||||||||  || |||||||||||||| || |||||||||||||||    
T  21317535 ttttagtaacacagcctttacctaacaattgttgaaatgttactaaatt 21317487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 246
Target Start/End: Original strand, 26083909 - 26083937
Alignment:
Q  218 tgttactagatcttaattatgttgtagtg 246  Q
    |||||||||||||||||||||||||||||    
T  26083909 tgttactagatcttaattatgttgtagtg 26083937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 28461119 - 28461067
Alignment:
Q  195 ttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtgt 247  Q
    |||||| |||||||||||| ||||||||||| ||||||  ||||| |||||||    
T  28461119 ttgatttagttacaattttgaagtgttactaaatcttatatatgtagtagtgt 28461067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 54186559 - 54186507
Alignment:
Q  195 ttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtgt 247  Q
    |||||| |||||||||||| ||||||||||| ||||||  ||||| |||||||    
T  54186559 ttgatttagttacaattttaaagtgttactaaatcttatatatgtagtagtgt 54186507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 225
Target Start/End: Original strand, 31342636 - 31342816
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||| | |   ||||| ||||||||||||||||||| ||| || |||||||||| |||||| |  |||||||||| ||  |    
T  31342636 tgatacaaaaagtgttacaataaggtaccatttgcaacactttttgattgttacagatagtactataaaatgtaactaaaacactttagtaacacgggct 31342735  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||| ||||||||| ||||| |||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  31342736 ttatctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagttacaattttcaagtgttacta 31342816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 47 - 225
Target Start/End: Complemental strand, 30267181 - 30267003
Alignment:
Q  47 atacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcattt 146  Q
    |||||||| ||||||||||| || |   ||||||||||||||||||||||||  ||| || |||||||||| |||||| || ||| |||||| ||  |||    
T  30267181 atacaaaaagtgttacaatagtgtaacatttgcgacactttttgattgttacggatagtactataaaatgtaactaaaactctttggtaacacgggcttt 30267082  T
Q  147 acctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||| ||||  |||||||||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  30267081 acctaacaattgttcaggtgttactaaatttaattactaacatttttcttgatttagttacaattttcaagtgttacta 30267003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 34 - 247
Target Start/End: Complemental strand, 24479344 - 24479130
Alignment:
Q  34 attgttattgatgatacaaaatgtgttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatcttttta 132  Q
    ||||||| || || |||||||  |||||||||| || ||  |||| ||||||||||||| ||||| | |||||| |||||||| | |||||| || ||||    
T  24479344 attgttaatggtggtacaaaaaatgttacaatagtgtaaccttttacgacactttttgaatgttatagataatactataaaatataactaaagctcttta 24479245  T
Q  133 gtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatctta 232  Q
    |||||| |   ||||||||| |||| |||||||||||||||||| ||| ||||||| || |||||||| ||| | |||||||||||||||||| |||| |    
T  24479244 gtaacacgagctttacctaagaattgttcaaatgttactaaatttaattagtaacagttatcttgatttagtaataattttcaagtgttactatatctca 24479145  T
Q  233 attatgttgtagtgt 247  Q
    |||||||| ||||||    
T  24479144 attatgttatagtgt 24479130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 76 - 225
Target Start/End: Complemental strand, 15513816 - 15513667
Alignment:
Q  76 ttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaat 175  Q
    ||||||||||||||||||| |||| ||| || |||||||||| |||||||||||||||||||| |   |||||||||||||| ||||| |||||| ||||    
T  15513816 ttgcgacactttttgattgatacagatagtactataaaatgtaactaaatctttttagtaacacgagctttacctaacaattgttcaagtgttacaaaat 15513717  T
Q  176 tgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    | ||  ||||||||||||||||||| | |||||||||| || ||||||||    
T  15513716 ttaactagtaacatttttcttgatttacttacaatttttaattgttacta 15513667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 245
Target Start/End: Complemental strand, 7702610 - 7702409
Alignment:
Q  45 tgatacaaaatgtgttacaataatg-aatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggca 143  Q
    |||||||||| |||||| ||||||| || ||||| ||||| ||||| | ||||||| |||||| || ||||||| |||||| || |||||||| | ||      
T  7702610 tgatacaaaaagtgttataataatgtaacattttacgacaatttttaaatgttacagataatactacaaaatgtaactaaagctctttagtaatatgggc 7702511  T
Q  144 tttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgta 243  Q
    |||||||||||||| | ||||||||||||| || ||| | |||||||||| || ||| ||| | |||||||| |||||||||||| | ||||||||||||    
T  7702510 tttacctaacaattgtacaaatgttactaattttaattaataacattttttttaatttagtaataattttcatgtgttactagatgtcaattatgttgta 7702411  T
Q  244 gt 245  Q
    ||    
T  7702410 gt 7702409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 73 - 225
Target Start/End: Complemental strand, 40016744 - 40016591
Alignment:
Q  73 attttgcgacactttttgattgttacaaataataatataaaatgtgactaaa-tctttttagtaacaaggcatttacctaacaattattcaaatgttact 171  Q
    ||||| ||| ||||||||| ||||||| ||||||  ||||||||| | |||| ||| |||||||| | ||  ||||||||||||||||||||||||||||    
T  40016744 attttacgatactttttgaatgttacagataatacaataaaatgtaattaaaatctctttagtaatagggtctttacctaacaattattcaaatgttact 40016645  T
Q  172 aaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||| ||||||||||||||| ||||||| | | | ||||||||||||||||||    
T  40016644 aaatttaatcagtaacattttacttgatttaataataattttcaagtgttacta 40016591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 45 - 225
Target Start/End: Complemental strand, 7718365 - 7718185
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| |||||||||||||| |   ||||||||| ||||| ||| ||||  ||| || |||||||||| | |||| || |||||||||| ||  |    
T  7718365 tgatacaaaaagtgttacaataatgcaacatttgcgacatttttttattattacggatagtactataaaatgtaattaaaactctttagtaacacggact 7718266  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||| ||||||||| ||||  |||||||||||| ||| ||||| ||||||||||||| ||||||||||||||||| ||||||    
T  7718265 ttatctaacaattgttcatgtgttactaaatttaattagtaatatttttcttgatttagttacaattttcaagtattacta 7718185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 45 - 225
Target Start/End: Complemental strand, 44921137 - 44920958
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| ||||||||||| || |   ||||||||| ||||| ||||||||  ||| || |||||||||| |||||| || |||||||||| |   |    
T  44921137 tgatacaaaaagtgttacaatagtgtaacatttgcgacatttttttattgttacggatagtactataaaatgtaactaaaactctttagtaacacgagct 44921038  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||||| || |  |||||||||||| ||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  44921037 ttacctaacaattgtttaggtgttactaaatttaattagtaacattttt-ttgatttagttacaattttcaagtgttacta 44920958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 101 - 241
Target Start/End: Complemental strand, 11017581 - 11017441
Alignment:
Q  101 ataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgatt 200  Q
    |||||| |||||| ||| ||| || ||||||||||||| ||  ||||||||||||||  ||||||||||||||||| ||| ||||||| ||||||| |||    
T  11017581 ataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaattttctttatt 11017482  T
Q  201 aagttacaattttcaagtgttactagatcttaattatgttg 241  Q
     ||| ||  ||||||| ||||||||||||| ||||||||||    
T  11017481 tagtaacggttttcaattgttactagatctcaattatgttg 11017441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 129 - 246
Target Start/End: Complemental strand, 41573489 - 41573372
Alignment:
Q  129 tttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagat 228  Q
    |||||||||| ||  |||||||||||||| || || |||||||||||| ||| ||||||||||||||||||| ||||||| ||||  | |||||||| ||    
T  41573489 tttagtaacacggggtttacctaacaattgtttaactgttactaaatttaattagtaacatttttcttgatttagttacattttttgaatgttactaaat 41573390  T
Q  229 cttaattatgttgtagtg 246  Q
    || |||| ||||||||||    
T  41573389 ctcaattttgttgtagtg 41573372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 73 - 247
Target Start/End: Complemental strand, 22966677 - 22966501
Alignment:
Q  73 attttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttacta 172  Q
    |||||||| || |||| || ||||||| |||||| | |||||||| ||||||  | |||||||||| ||  |||||||||||||| || |||||| ||||    
T  22966677 attttgcggcatttttcgaatgttacagataatactctaaaatgtaactaaaggtctttagtaacaggggctttacctaacaattgtttaaatgtaacta 22966578  T
Q  173 aattgaatcagtaacattt--ttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtgt 247  Q
    ||||  || ||||| ||||  || || ||| ||| | | |||||||||||||||| |||| |||||| |||||||||    
T  22966577 aatttcattagtaatattttattttttatttagtaatagttttcaagtgttactaaatctcaattatattgtagtgt 22966501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 26734887 - 26734732
Alignment:
Q  86 ttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagta 185  Q
    |||||| ||||||  |||||| | |||||||  |||||| || |||| ||| | ||  |||||||||||||||||||||| || ||||||| ||| | ||    
T  26734887 ttttgaatgttactgataatattgtaaaatgatactaaagctctttaataatatggactttacctaacaattattcaaatattgctaaatttaattaata 26734788  T
Q  186 acatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtag 244  Q
    |  ||||||||||||   | ||||||||||| ||||| || |||| ||||||| |||||    
T  26734787 agttttttcttgatt---taacaattttcaaatgttattatatctcaattatgctgtag 26734732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 45 - 225
Target Start/End: Complemental strand, 6879 - 6699
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| || ||||||||| | |   ||||| ||||||||||||||||||| ||| || |||||||||| |||||| | |||||||||||  |  |    
T  6879 tgatacaaaaagttttacaataaggtaccatttgcaacactttttgattgttacagatagtactataaaatgtaactaaaacattttagtaacaccggct 6780  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttacta 225  Q
    ||||||||||||| ||||| |||| ||||||| ||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  6779 ttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagttacaatttttaagtgttacta 6699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 667 - 843
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| ||||| |||||||| |   ||||||||||||||| ||||||| | |||||| |||||||||| |||||| || |||||||||| ||  |    
T  667 tgatacaaaaagtgttccaataatgtaacatttgcgacactttttaattgttatagataatactataaaatgtaactaaaactctttagtaacatggact 766  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgtt 221  Q
    ||| ||||||||| ||| | |||| | ||||| ||| ||||||| ||||||||||| ||||||||||||||||||||    
T  767 ttatctaacaattgttcgagtgttgcaaaatttaattagtaacaattttcttgatttagttacaattttcaagtgtt 843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 218
Target Start/End: Original strand, 40618 - 40791
Alignment:
Q  45 tgatacaaaatgtgttacaataatgaatattttgcgacactttttgattgttacaaataataatataaaatgtgactaaatctttttagtaacaaggcat 144  Q
    |||||||||| ||||||| |||||| |   |||| |||||||||| ||||||||| |||||| |||||||||| |||||| || |||||||||| ||  |    
T  40618 tgatacaaaaagtgttacgataatgtaacatttgagacactttttaattgttacagataatactataaaatgtaactaaaactctttagtaacatggact 40717  T
Q  145 ttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagt 218  Q
    ||| ||||||||| ||| | |||| | ||||| ||| ||||||| ||||||||||| |||||||||||||||||    
T  40718 ttatctaacaattgttcgagtgttgcaaaatttaattagtaacaattttcttgatttagttacaattttcaagt 40791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 446266 - 446397
Alignment:
Q  108 tataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttac 207  Q
    |||||| ||| |||||| || |||||||| | ||  ||| |||||||||| |||||||||||| ||||| |||  |||||| |||   ||||| ||||||    
T  446266 tataaagtgttactaaagctctttagtaatatggacttttcctaacaattgttcaaatgttaccaaatttaattggtaacaatttgtatgatttagttac 446365  T
Q  208 aattttcaagtgttactagatcttaattatgt 239  Q
    ||| ||| | ||||||||||||| ||||||||    
T  446366 aatcttcgattgttactagatctcaattatgt 446397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 8807 - 8724
Alignment:
Q  162 aaatgttactaaattgaatcagtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtg 246  Q
    ||||||||||| ||| | | |||||||||||  || ||| ||||||| ||||||| |||||||| ||||||||||||||||||||    
T  8807 aaatgttactatattcatttagtaacattttgttt-atttagttacatttttcaactgttactaaatcttaattatgttgtagtg 8724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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