View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16815_high_50 (Length: 282)

Name: NF16815_high_50
Description: NF16815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16815_high_50
NF16815_high_50
[»] chr4 (28 HSPs)
chr4 (1-272)||(11432481-11432752)
chr4 (88-272)||(6893051-6893234)
chr4 (104-265)||(4576719-4576880)
chr4 (14-272)||(7912706-7912964)
chr4 (104-266)||(22319889-22320051)
chr4 (106-272)||(23620961-23621127)
chr4 (170-272)||(34510363-34510465)
chr4 (20-264)||(41819318-41819560)
chr4 (104-272)||(55957638-55957806)
chr4 (81-272)||(10183549-10183739)
chr4 (106-272)||(30920382-30920547)
chr4 (14-272)||(12154294-12154552)
chr4 (105-272)||(37666004-37666171)
chr4 (166-272)||(32519703-32519809)
chr4 (87-156)||(22749052-22749121)
chr4 (115-272)||(37244078-37244235)
chr4 (165-272)||(36105730-36105837)
chr4 (105-266)||(40629976-40630137)
chr4 (152-253)||(52973655-52973756)
chr4 (186-264)||(4435275-4435353)
chr4 (165-267)||(26660097-26660198)
chr4 (106-262)||(6829073-6829229)
chr4 (144-232)||(43024764-43024852)
chr4 (165-246)||(52264294-52264375)
chr4 (121-253)||(43588265-43588397)
chr4 (182-265)||(32526372-32526455)
chr4 (14-55)||(26659988-26660029)
chr4 (140-253)||(33051989-33052101)
[»] chr1 (40 HSPs)
chr1 (82-272)||(45377693-45377883)
chr1 (14-272)||(16010643-16010901)
chr1 (22-272)||(2758844-2759094)
chr1 (81-272)||(4362088-4362279)
chr1 (106-264)||(30562185-30562343)
chr1 (85-272)||(4441201-4441388)
chr1 (105-267)||(642723-642885)
chr1 (117-266)||(10158025-10158174)
chr1 (95-272)||(45338978-45339155)
chr1 (169-272)||(47295746-47295849)
chr1 (127-265)||(3839366-3839504)
chr1 (82-272)||(51370103-51370293)
chr1 (140-272)||(7287248-7287380)
chr1 (185-272)||(27089687-27089774)
chr1 (121-253)||(6213145-6213277)
chr1 (106-265)||(17391691-17391850)
chr1 (87-272)||(45756227-45756412)
chr1 (83-265)||(8424476-8424643)
chr1 (123-267)||(25412322-25412466)
chr1 (132-264)||(28397334-28397466)
chr1 (163-267)||(46998056-46998160)
chr1 (105-272)||(41158050-41158217)
chr1 (118-271)||(14346306-14346459)
chr1 (166-247)||(29639674-29639755)
chr1 (85-201)||(7799201-7799316)
chr1 (97-272)||(23757285-23757459)
chr1 (82-272)||(39737195-39737378)
chr1 (170-272)||(11751654-11751756)
chr1 (93-201)||(1826495-1826603)
chr1 (106-229)||(3022574-3022697)
chr1 (82-253)||(4402245-4402416)
chr1 (209-272)||(20953031-20953094)
chr1 (105-267)||(22863163-22863323)
chr1 (14-64)||(28397258-28397308)
chr1 (193-262)||(756461-756530)
chr1 (104-205)||(37696700-37696801)
chr1 (194-262)||(1825226-1825293)
chr1 (165-265)||(35718394-35718494)
chr1 (109-212)||(6135915-6136018)
chr1 (17-55)||(45756446-45756484)
[»] chr7 (29 HSPs)
chr7 (14-261)||(41015852-41016098)
chr7 (105-272)||(25685208-25685375)
chr7 (14-272)||(32555774-32556032)
chr7 (102-272)||(5034004-5034174)
chr7 (13-272)||(9270969-9271230)
chr7 (15-272)||(32420178-32420435)
chr7 (85-272)||(42672655-42672842)
chr7 (106-272)||(39727153-39727319)
chr7 (82-260)||(18330833-18331011)
chr7 (104-272)||(40727175-40727343)
chr7 (109-272)||(9479205-9479368)
chr7 (170-272)||(34653942-34654044)
chr7 (82-267)||(25072577-25072762)
chr7 (104-264)||(41937807-41937967)
chr7 (115-272)||(42766622-42766779)
chr7 (83-265)||(22166057-22166239)
chr7 (83-265)||(22224764-22224946)
chr7 (104-266)||(21144543-21144707)
chr7 (116-221)||(22541181-22541286)
chr7 (165-246)||(44073529-44073610)
chr7 (110-272)||(38566540-38566699)
chr7 (106-186)||(39725444-39725524)
chr7 (174-229)||(28032058-28032113)
chr7 (168-251)||(37155631-37155714)
chr7 (109-267)||(29171597-29171757)
chr7 (130-232)||(32684169-32684271)
chr7 (106-186)||(39723574-39723654)
chr7 (105-205)||(18793580-18793680)
chr7 (224-272)||(18879693-18879741)
[»] chr5 (32 HSPs)
chr5 (15-272)||(36439739-36439996)
chr5 (88-272)||(40201871-40202055)
chr5 (105-266)||(6391491-6391652)
chr5 (104-272)||(35319211-35319379)
chr5 (116-255)||(40417402-40417541)
chr5 (82-272)||(28207357-28207546)
chr5 (81-267)||(40514657-40514844)
chr5 (81-264)||(8570278-8570461)
chr5 (116-255)||(39981544-39981683)
chr5 (115-272)||(42108442-42108599)
chr5 (141-267)||(28022690-28022816)
chr5 (135-272)||(333637-333774)
chr5 (105-272)||(12580153-12580320)
chr5 (85-272)||(16885344-16885531)
chr5 (81-266)||(29570964-29571138)
chr5 (125-272)||(41386971-41387118)
chr5 (106-272)||(15530002-15530168)
chr5 (105-272)||(19298104-19298272)
chr5 (163-267)||(17742945-17743049)
chr5 (165-266)||(16844557-16844658)
chr5 (104-272)||(22859698-22859866)
chr5 (115-266)||(38876548-38876700)
chr5 (165-264)||(11422667-11422766)
chr5 (170-266)||(39963915-39964011)
chr5 (170-246)||(18988527-18988603)
chr5 (169-267)||(14830573-14830671)
chr5 (196-264)||(32906826-32906893)
chr5 (173-253)||(35412342-35412422)
chr5 (165-272)||(2823533-2823640)
chr5 (169-264)||(18731159-18731254)
chr5 (172-246)||(15680310-15680384)
chr5 (108-149)||(10622595-10622636)
[»] chr8 (37 HSPs)
chr8 (20-253)||(25107434-25107666)
chr8 (82-266)||(1222364-1222548)
chr8 (117-272)||(21019681-21019836)
chr8 (20-266)||(10710147-10710393)
chr8 (81-272)||(39139235-39139426)
chr8 (14-272)||(22738423-22738680)
chr8 (165-266)||(40691140-40691241)
chr8 (101-267)||(2062672-2062838)
chr8 (22-260)||(2621410-2621648)
chr8 (85-272)||(2374176-2374363)
chr8 (82-272)||(30469274-30469453)
chr8 (117-267)||(19973003-19973152)
chr8 (168-272)||(9617276-9617380)
chr8 (165-272)||(31587974-31588081)
chr8 (117-272)||(3457928-3458083)
chr8 (127-272)||(10811829-10811974)
chr8 (115-262)||(17988962-17989107)
chr8 (165-267)||(31955730-31955832)
chr8 (104-264)||(38996126-38996286)
chr8 (104-264)||(44602148-44602308)
chr8 (82-205)||(2510377-2510500)
chr8 (18-136)||(18020353-18020471)
chr8 (165-272)||(17006299-17006405)
chr8 (165-272)||(17570843-17570949)
chr8 (115-205)||(44652617-44652707)
chr8 (82-261)||(254746-254924)
chr8 (82-261)||(660934-661112)
chr8 (104-267)||(35458698-35458861)
chr8 (14-99)||(40691031-40691116)
chr8 (15-73)||(44652731-44652789)
chr8 (223-272)||(2510494-2510543)
chr8 (82-242)||(846751-846910)
chr8 (115-230)||(17948929-17949044)
chr8 (184-246)||(9552501-9552563)
chr8 (88-150)||(39629158-39629220)
chr8 (88-150)||(39638708-39638770)
chr8 (170-246)||(40554397-40554473)
[»] chr3 (23 HSPs)
chr3 (81-264)||(43464542-43464725)
chr3 (9-267)||(9503642-9503900)
chr3 (81-272)||(29697374-29697565)
chr3 (12-267)||(22990328-22990583)
chr3 (95-272)||(29563674-29563845)
chr3 (12-267)||(11836942-11837197)
chr3 (14-265)||(20601402-20601665)
chr3 (104-266)||(36159084-36159246)
chr3 (14-272)||(21523842-21524089)
chr3 (106-267)||(31132901-31133055)
chr3 (82-267)||(44890550-44890735)
chr3 (105-272)||(51880286-51880457)
chr3 (104-267)||(52426213-52426376)
chr3 (170-272)||(45613225-45613327)
chr3 (82-253)||(27483384-27483555)
chr3 (107-191)||(980845-980929)
chr3 (108-265)||(43946710-43946869)
chr3 (165-264)||(27048541-27048640)
chr3 (169-264)||(33458660-33458755)
chr3 (182-264)||(30643188-30643270)
chr3 (96-125)||(22771160-22771189)
chr3 (14-55)||(29563874-29563915)
chr3 (214-255)||(29719350-29719391)
[»] chr2 (22 HSPs)
chr2 (11-272)||(9716306-9716566)
chr2 (116-272)||(16054892-16055048)
chr2 (106-272)||(43897988-43898153)
chr2 (88-272)||(5880133-5880316)
chr2 (82-267)||(39848541-39848726)
chr2 (14-248)||(16202142-16202376)
chr2 (165-272)||(4816726-4816833)
chr2 (152-272)||(9730100-9730219)
chr2 (165-267)||(32700587-32700689)
chr2 (139-272)||(38556514-38556647)
chr2 (165-272)||(5442919-5443026)
chr2 (169-267)||(16735032-16735130)
chr2 (168-272)||(1845216-1845320)
chr2 (172-272)||(5712574-5712674)
chr2 (108-253)||(7598853-7598999)
chr2 (180-262)||(10057215-10057297)
chr2 (170-231)||(29037674-29037735)
chr2 (164-252)||(12677840-12677928)
chr2 (196-245)||(37259358-37259407)
chr2 (82-126)||(5712699-5712743)
chr2 (168-230)||(2764246-2764308)
chr2 (14-55)||(39848753-39848794)
[»] chr6 (16 HSPs)
chr6 (24-246)||(5331269-5331491)
chr6 (14-272)||(33247883-33248141)
chr6 (81-272)||(24073594-24073784)
chr6 (93-272)||(24556654-24556834)
chr6 (81-272)||(10667453-10667644)
chr6 (132-272)||(9952789-9952929)
chr6 (170-264)||(26244338-26244432)
chr6 (120-272)||(33614459-33614611)
chr6 (105-230)||(8351296-8351421)
chr6 (119-266)||(13640730-13640877)
chr6 (108-246)||(5167129-5167267)
chr6 (165-266)||(6248850-6248951)
chr6 (139-253)||(5423086-5423200)
chr6 (181-230)||(2803825-2803874)
chr6 (11-48)||(24556875-24556912)
chr6 (199-231)||(6228374-6228406)
[»] scaffold0036 (1 HSPs)
scaffold0036 (170-272)||(53062-53164)
[»] scaffold0330 (1 HSPs)
scaffold0330 (82-263)||(11006-11186)
[»] scaffold0373 (1 HSPs)
scaffold0373 (106-262)||(7191-7347)
[»] scaffold0003 (1 HSPs)
scaffold0003 (170-263)||(324970-325063)
[»] scaffold0504 (1 HSPs)
scaffold0504 (130-246)||(11948-12064)


Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 11432752 - 11432481
Alignment:
Q  1 cactagatgcaattagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggccta 100  Q
    |||||||||||||||||||||| |||||||||| || |||||||||||||||||| ||||||||| |||||||       ||||||||||||||||||||    
T  11432752 cactagatgcaattagggatggaaataggctagaccaagctaagctttgtaaggcctgaacctggcctgccaatttttttgaaggcctaagcctggccta 11432653  T
Q  101 cgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctt 200  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  11432652 cgacctgtcatagacttactttttaggcctgagtctgaccttttaaaagcttgatatggtctgttagcctgtttaaaagcctatttcatataaatatctt 11432553  T
Q  201 taaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11432552 taaatcagtaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcttttg 11432481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 88 - 272
Target Start/End: Complemental strand, 6893234 - 6893051
Alignment:
Q  88 taagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttc 187  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||| |||| |||||||||||| ||||| | || | |||| ||||||||||||||||||    
T  6893234 taagcctggcctacgacctgtcatatacttactttttaggcatgaatctggccttctgaaagcctgatacggtctgctagcatgtttaaaagcctatttc 6893135  T
Q  188 atataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||| || || ||||||| ||||||||||||| |||||||||||| ||||||||| |||||||||||| ||||||||||| ||||    
T  6893134 atatgaacatttttaaataagcaatgtgatctgagtttaaatagactagcgaact-atatatcaattagattaaactctcttttg 6893051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 104 - 265
Target Start/End: Complemental strand, 4576880 - 4576719
Alignment:
Q  104 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 203  Q
    ||||||||||||||||||||||||||| |||||| |||||| ||||||||||| |    | |||||||||||||||||| |||||||| || ||||||||    
T  4576880 cctgtcatagacttactttttaggcctaagtctggccttctaaaagcttgatacggcttgctagcctgtttaaaagcctgtttcatatgaaaatctttaa 4576781  T
Q  204 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 265  Q
    || |||||||||||||||||||||||||| || ||||||||||||||||||| ||| |||||    
T  4576780 ataagcaatgtgatctaagtttaaatagactaacgaactaatatatcaattagattcaactc 4576719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 14 - 272
Target Start/End: Original strand, 7912706 - 7912964
Alignment:
Q  14 tagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatag 113  Q
    ||||| |||||||||||||||| ||||||  ||||| || || ||| ||||  |||||||       ||||||||||| ||||||| ||   ||||||||    
T  7912706 taggggtgggaataggctaggctgagctagactttgcaaagcctgagcctgtcctgccaaattttttgaaggcctaagtctggcctgcggtatgtcatag 7912805  T
Q  114 acttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatg 213  Q
    |||||||||||||| | ||||||| |||||||||||| ||||| || |   || ||| |||||||| ||||||| ||| || || ||||| | |||||||    
T  7912806 acttactttttaggtccgagtctggccttctgaaagcctgatacgacctactaacctatttaaaagtctatttcttatgaacatttttaattaagcaatg 7912905  T
Q  214 tgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    | |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  7912906 ttatctaagtttaaatagattagcgaactaatatatcaattagattaaactctcttttg 7912964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 104 - 266
Target Start/End: Original strand, 22319889 - 22320051
Alignment:
Q  104 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 203  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||| |  | | || ||||||||||||| |||||||||| ||||| |||||    
T  22319889 cctgtcataggcttactttttaggcctgagtctgaccttctgaaagcctgatacggcctgctaacctgtttaaaagcatatttcatatgaatatgtttaa 22319988  T
Q  204 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactct 266  Q
    || | ||| ||||| |||||||||||||| |||| ||||||||||||||||  ||||||||||    
T  22319989 ataaacaacgtgatataagtttaaatagactagcaaactaatatatcaatttgattaaactct 22320051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 106 - 272
Target Start/End: Complemental strand, 23621127 - 23620961
Alignment:
Q  106 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 205  Q
    |||||||  |||||||||||||||||||||| ||||||| |||||||  || || | |||||||| |||||||| |||| |||||| || || |||||||    
T  23621127 tgtcatatgcttactttttaggcctgagtctaaccttctaaaagctttctacgacctgttagcctatttaaaagtctatatcatatgaacatatttaaat 23621028  T
Q  206 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
     |||||||||||||||||||||||||| |||| || ||||| |||||||| ||||||||||| ||||    
T  23621027 aagcaatgtgatctaagtttaaatagactagcaaattaatagatcaattagattaaactctcttttg 23620961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 170 - 272
Target Start/End: Original strand, 34510363 - 34510465
Alignment:
Q  170 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcct 269  Q
    |||||||||||||||||||||| || |||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||| |    
T  34510363 tgtttaaaagcctatttcatatgaacatctttaaataagcaatgtaatctaagtttaaatagactagcgaactaatatatcaattagattaaactctctt 34510462  T
Q  270 ttg 272  Q
    |||    
T  34510463 ttg 34510465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 264
Target Start/End: Complemental strand, 41819560 - 41819318
Alignment:
Q  20 tgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttac 119  Q
    |||||||||| |||||||||||| |||||||||||| ||| ||||| |||||||       |||||| |||| ||||| | |   ||||||||  |||||    
T  41819560 tgggaataggttaggccgagctatgctttgtaaggcttgagcctggcctgccaaatttgttgaaggcataagtctggcatgctgtctgtcatatgcttac 41819461  T
Q  120 tttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatct 219  Q
    |||| ||| ||||||||| | |||| ||||  ||||| ||   | |||||||||||||  |||||||||||| || |||||||||  | ||||| |||||    
T  41819460 ttttaaggtctgagtctggctttctaaaagtctgatacgacatgctagcctgtttaaagacctatttcatatgaacatctttaaa--aacaatgcgatct 41819363  T
Q  220 aagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    ||||||||||||| |||| ||||||||||||||||| ||||||||    
T  41819362 aagtttaaatagactagcaaactaatatatcaattagattaaact 41819318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 104 - 272
Target Start/End: Complemental strand, 55957806 - 55957638
Alignment:
Q  104 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 203  Q
    |||||||||  | ||||||||||||||||| ||| |||| ||||||| |||||||| | | |||||||||||||||||||| || ||| || ||||||||    
T  55957806 cctgtcataagcctactttttaggcctgagcctggccttttgaaagcctgatatgacctgctagcctgtttaaaagcctatatcttatgaacatctttaa 55957707  T
Q  204 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    || | ||||||||||||||||||| | || ||||||| |||||  ||||||| ||||||||||| ||||    
T  55957706 ataaccaatgtgatctaagtttaagtggactagcgaaataatagttcaattagattaaactctcttttg 55957638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 81 - 272
Target Start/End: Original strand, 10183549 - 10183739
Alignment:
Q  81 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 180  Q
    ||||||||||||||||||| |||||| |||||| |||||||||| ||||| ||| || |||| ||||| | ||||| |  | | ||||||||||||||      
T  10183549 gaaggcctaagcctggcctgcgacctttcataggcttactttttcggcctaagtttggccttgtgaaaacctgatacggcctgctagcctgtttaaaaat 10183648  T
Q  181 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||||||||||||| || ||||||| || ||| |||  ||| |||||||||||||||||||||| |||||||||| | ||||||||| ||||    
T  10183649 ctatttcatataaacatttttaaataagtaat-tgagttaaatttaaatagattagcgaactaacatatcaattagagtaaactctcttttg 10183739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 106 - 272
Target Start/End: Complemental strand, 30920547 - 30920382
Alignment:
Q  106 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 205  Q
    |||||||  ||||||||||| | |||||||||||||||||||| ||||||||  || |||||  |||||||| |  ||||||||||| | ||||||||||    
T  30920547 tgtcatatgcttactttttaagtctgagtctgaccttctgaaa-cttgatatagtctgttagtttgtttaaaggtttatttcatatagacatctttaaat 30920449  T
Q  206 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
     || |||| |||||||| ||||||| ||||| |||||||||||||||| | ||||||||||| ||||    
T  30920448 aagtaatgcgatctaaggttaaataaattagtgaactaatatatcaataatattaaactctcttttg 30920382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 272
Target Start/End: Complemental strand, 12154552 - 12154294
Alignment:
Q  14 tagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatag 113  Q
    ||||||| |||||||||||||  || ||| |||||| ||||| | ||||||| |||||||        ||| |||||||||  ||| ||  |||||||||    
T  12154552 tagggataggaataggctagggtgaactaggctttgcaaggcctaaacctggcctgccaattttttttaagacctaagcctaacctgcggtctgtcatag 12154453  T
Q  114 acttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatg 213  Q
     ||||||||||||||||||| ||| | |||| ||||| ||||| |  |   ||||||||||||||||||||||||||| || |||||||||| | |||||    
T  12154452 gcttactttttaggcctgagcctggcattcttaaagcctgatacggccttctagcctgtttaaaagcctatttcatatgaacatctttaaataaacaatg 12154353  T
Q  214 tgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
     |||  ||||||||||||  ||| |||||||||  ||| ||| ||||||||||| ||||    
T  12154352 cgattgaagtttaaatagtctagagaactaatagctcagttagattaaactctcttttg 12154294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 272
Target Start/End: Complemental strand, 37666171 - 37666004
Alignment:
Q  105 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 204  Q
    ||||||||| |||||||||| || ||||||||||| |||||||||  |||||||||  |||||||||||||||   ||||||||||| || || ||||      
T  37666171 ctgtcataggcttactttttcggtctgagtctgacattctgaaagtctgatatgatttgttagcctgtttaaatatctatttcatatgaacatatttacg 37666072  T
Q  205 tcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    | ||  ||||||| |||||||||||| | ||  |||| |||||||| |||| ||||||||||| ||||    
T  37666071 taagtcatgtgatttaagtttaaatataatattgaacgaatatatcgattagattaaactctcatttg 37666004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 272
Target Start/End: Original strand, 32519703 - 32519809
Alignment:
Q  166 agcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 265  Q
    ||||||||||||||||||| |||||| || |||||||||| ||||||||| |  ||||||||||||  ||||||| ||||| |||||||| |||||||||    
T  32519703 agcctgtttaaaagcctatctcatatgaacatctttaaataagcaatgtggttgaagtttaaatagtctagcgaattaatagatcaattagattaaactc 32519802  T
Q  266 tcctttg 272  Q
    || ||||    
T  32519803 tcttttg 32519809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 22749052 - 22749121
Alignment:
Q  87 ctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgata 156  Q
    |||||||||||||||| |||||||||| | ||||||||||||||||||||| ||||||||||||||||||    
T  22749052 ctaagcctggcctacggcctgtcataggcctactttttaggcctgagtctggccttctgaaagcttgata 22749121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 115 - 272
Target Start/End: Complemental strand, 37244235 - 37244078
Alignment:
Q  115 cttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgt 214  Q
    ||||| ||||||||||||| |||||||| ||||| | ||||| || | | || ||||||||||||||||| || ||| || || ||||||| ||||||||    
T  37244235 cttacattttaggcctgagcctgaccttatgaaaacctgatacgacctgataacctgtttaaaagcctatatcttatgaacatttttaaataagcaatgt 37244136  T
Q  215 gatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||  ||||||||||| | ||| |||| |||| ||||||||  ||||||||| |||||    
T  37244135 gatgcaagtttaaataaactagtgaacaaatagatcaattaggttaaactcttctttg 37244078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 272
Target Start/End: Original strand, 36105730 - 36105837
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    |||| |||||||||||||||||||||| || || |||||||    ||||||||  ||||||||||||| || ||||||||||||||||| | ||||||||    
T  36105730 tagcgtgtttaaaagcctatttcatatgaacatttttaaatatttaatgtgattcaagtttaaatagactaacgaactaatatatcaatgagattaaact 36105829  T
Q  265 ctcctttg 272  Q
    ||| ||||    
T  36105830 ctcttttg 36105837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 40630137 - 40629976
Alignment:
Q  105 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 204  Q
    ||||||||| |||||||| ||||  | ||||||||||| ||||||||||||| |    | |||||| |||||||||||||||||||| || || ||||||    
T  40630137 ctgtcataggcttactttgtaggttttagtctgaccttttgaaagcttgatacggcttgctagcctttttaaaagcctatttcatatgaacat-tttaaa 40630039  T
Q  205 tcagcaatgtgatctaagtttaaatagattagcgaact-aatatatcaattaaattaaactct 266  Q
      || ||||||||| |||| |||||  ||||| ||||| ||||||||||| | ||||||||||    
T  40630038 gaagtaatgtgatcaaagtgtaaatgaattagtgaactaaatatatcaatgagattaaactct 40629976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 52973655 - 52973756
Alignment:
Q  152 tgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatca 251  Q
    |||||||| | | |||| ||||||||| ||||||| || | || |||||||||| || ||||||||||||||| ||||||| ||||||||||||| ||||    
T  52973655 tgatatgacctgatagcttgtttaaaaacctattttatttgaacatctttaaataagtaatgtgatctaagttaaaatagactagcgaactaatagatca 52973754  T
Q  252 at 253  Q
    ||    
T  52973755 at 52973756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 264
Target Start/End: Complemental strand, 4435353 - 4435275
Alignment:
Q  186 tcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    |||||| || |||||||||| | ||||||||| |||||||||||||| |||| |||||||| |||||||| ||||||||    
T  4435353 tcatatgaacatctttaaataaacaatgtgatataagtttaaatagactagcaaactaatagatcaattagattaaact 4435275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 267
Target Start/End: Original strand, 26660097 - 26660198
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    ||||||||||||| ||||||||||||| |  |||||||||| || ||||||||| ||| ||||||||| ||| || |||||| |||||| | ||||||||    
T  26660097 tagcctgtttaaa-gcctatttcatatgatcatctttaaataagtaatgtgatccaaggttaaatagactagtgagctaataaatcaataatattaaact 26660195  T
Q  265 ctc 267  Q
    |||    
T  26660196 ctc 26660198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 262
Target Start/End: Complemental strand, 6829229 - 6829073
Alignment:
Q  106 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 205  Q
    |||||||||||||||||||||| || || ||  |||| ||||||| ||||  ||   | |||||| |||||||| |||||||||||||| ||||||||||    
T  6829229 tgtcatagacttactttttaggtcttagcctagccttatgaaagcctgattagacttgctagcctatttaaaagtctatttcatataaacatctttaaat 6829130  T
Q  206 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaa 262  Q
     || |||| |||||||  |||||| || || | | |||||| |||||| | ||||||    
T  6829129 aagtaatgcgatctaatgttaaattgactaccaagctaatagatcaatgatattaaa 6829073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 43024852 - 43024764
Alignment:
Q  144 tgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaataga 232  Q
    |||||| ||||||||||| |||| ||| ||||||||  | |||||||| ||| ||||||||| |  |||||||||||||||||||||||    
T  43024852 tgaaagtttgatatgatctgttaacctatttaaaagtatgtttcatatgaatttctttaaataaataatgtgatctaagtttaaataga 43024764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 52264294 - 52264375
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaata 246  Q
    |||||| ||||||| | |||||||||| || |||||| ||| || |||||||| |||||||||||| | |||||||||||||    
T  52264294 tagcctatttaaaaacatatttcatatgaacatctttgaataagtaatgtgatataagtttaaataaactagcgaactaata 52264375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 253
Target Start/End: Original strand, 43588265 - 43588397
Alignment:
Q  121 ttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatcta 220  Q
    |||||||  ||| ||||||||||| |||| ||||||| |   |||||  |||||||||| ||||||||||| || |||||||||| || ||| ||||  |    
T  43588265 ttttaggtatgaatctgaccttctaaaagtttgatatcacatgttagtttgtttaaaagtctatttcatatcaacatctttaaataagtaatctgattga 43588364  T
Q  221 agtttaaatagattagcgaactaatatatcaat 253  Q
    ||| ||||||||  | | |||||||||||||||    
T  43588365 agtctaaatagaccaacaaactaatatatcaat 43588397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 265
Target Start/End: Original strand, 32526372 - 32526455
Alignment:
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 265  Q
    |||||||||| || |  ||||||| || || | ||||||||||||||||||||||| |||||||| |||||| | |||||||||    
T  32526372 tatttcatatgaacaaatttaaataagtaacgcgatctaagtttaaatagattagcaaactaataaatcaataagattaaactc 32526455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 26659988 - 26660029
Alignment:
Q  14 tagggatgggaataggctaggccgagctaagctttgtaaggc 55  Q
    ||||||||||||||||||||||||||||| |||||| |||||    
T  26659988 tagggatgggaataggctaggccgagctaggctttgcaaggc 26660029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 253
Target Start/End: Complemental strand, 33052101 - 33051989
Alignment:
Q  140 cttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcga 239  Q
    ||||| |||| ||||||||||  ||||| |||||||||||  |||| ||||| ||||| ||||||  || || |||||||||| |||||| || | ||||    
T  33052101 cttctaaaagtttgatatgatttgttagtctgtttaaaagtttattgcatatgaatatttttaaa-aagtaaagtgatctaaggttaaattgactggcga 33052003  T
Q  240 actaatatatcaat 253  Q
    | || |||||||||    
T  33052002 attattatatcaat 33051989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 3e-63; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 82 - 272
Target Start/End: Original strand, 45377693 - 45377883
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 181  Q
    |||||||||||||||||| || | |||||||||||||||||||| |||||||| || |||||||||||| ||||| | || | |||||||||||||||||    
T  45377693 aaggcctaagcctggcctgcggcttgtcatagacttactttttaagcctgagtttggccttctgaaagcctgatacggtctgctagcctgtttaaaagcc 45377792  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||||||||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  45377793 tatttcatatgaatatctttaaatcaacaatgtgatctaagtgtaaatagactagcgaactaatatatcaattagattaaactctcttttg 45377883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 14 - 272
Target Start/End: Complemental strand, 16010901 - 16010643
Alignment:
Q  14 tagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatag 113  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||  |||| |||||||       ||||||||||| ||||  | ||  ||||||||     
T  16010901 tagggatgggaataggctaggccgagctaggctttgtaaggcctgagtctggcctgccaattcttttgaaggcctaagtctggtttgcggtctgtcataa 16010802  T
Q  114 acttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatg 213  Q
     ||||||||||||||||||| ||| |||||||||||| ||||| |  | | |||||| |||||||| ||||||||||| || |||||||||||| |||||    
T  16010801 gcttactttttaggcctgagcctggccttctgaaagcctgatacggcctgctagcctttttaaaagtctatttcatatgaacatctttaaatcatcaatg 16010702  T
Q  214 tgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||| ||||| |||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  16010701 tgatttaagtgtaaatagactagcgaactaatatatcaattatattaaactctcttttg 16010643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 272
Target Start/End: Original strand, 2758844 - 2759094
Alignment:
Q  22 ggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttactt 121  Q
    |||||||| |||||||||||| |||||| ||||  ||| ||||| |||||||        ||||||||| ||||||||  ||||||||||||||||||||    
T  2758844 ggaataggttaggccgagctaggctttgcaagggttgagcctggcctgccaattttttttaaggcctaatcctggcctgtgacctgtcatagacttactt 2758943  T
Q  122 tttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaa 221  Q
    |||||| ||||| ||  |||||| ||||| ||||| ||   | ||||||||||||||||||||||||||| || || ||||||| | |||||||||||||    
T  2758944 tttaggtctgagccttgccttctcaaagcctgatacgacatgctagcctgtttaaaagcctatttcatatgaacatatttaaataaacaatgtgatctaa 2759043  T
Q  222 gtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||| ||||    
T  2759044 gtttaaattgattagcgaactaatatatcaattagattaaactctcttttg 2759094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 81 - 272
Target Start/End: Original strand, 4362088 - 4362279
Alignment:
Q  81 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 180  Q
    ||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |  |   ||||||||||||||||    
T  4362088 gaaggcctaagcctgacctgcggcctgtcatagacttactttttaggcttgagtctgaccttctgaaagcctgatacggcctactagcctgtttaaaagc 4362187  T
Q  181 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    ||||||||||| || || ||||||| ||||||||||| |||||||||||||| ||| | |||||||||| ||||| ||||||||||||||||    
T  4362188 ctatttcatatgaacatttttaaataagcaatgtgatttaagtttaaatagactagtggactaatatataaattagattaaactctcctttg 4362279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 106 - 264
Target Start/End: Original strand, 30562185 - 30562343
Alignment:
Q  106 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 205  Q
    |||||||| ||||||||||||||||| ||||| |||||||||||  |||||  | | | ||||||||||||||||||||||||||| || ||||||||||    
T  30562185 tgtcataggcttactttttaggcctgcgtctggccttctgaaagtctgatacaacctgctagcctgtttaaaagcctatttcatatgaacatctttaaat 30562284  T
Q  206 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
     | |||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  30562285 aatcaatgtgatctaagtttaaatagactagcaaactaatatatcaattatattaaact 30562343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 272
Target Start/End: Complemental strand, 4441388 - 4441201
Alignment:
Q  85 gcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctat 184  Q
    |||||||| |||||| ||||||||||||  | ||| |||||||||||||| || |||||||||||  ||||| | || | ||||||||||||||||||||    
T  4441388 gcctaagcttggcctgcgacctgtcataagcctaccttttaggcctgagtttggccttctgaaagtctgatacggtctgctagcctgtttaaaagcctat 4441289  T
Q  185 ttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
     || ||| || ||||||||||  | |||||||||||||||||||| || ||| |||||||||  ||||||| ||||||||||| ||||    
T  4441288 atcttatgaacatctttaaatatgaaatgtgatctaagtttaaatggactagtgaactaataattcaattagattaaactctcttttg 4441201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 105 - 267
Target Start/End: Complemental strand, 642885 - 642723
Alignment:
Q  105 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 204  Q
    ||||||||| | ||||||||| || |||||||| |||||||||||  ||||||  |  |||||||||||||||||||||| || ||| || |||| ||||    
T  642885 ctgtcataggcctactttttatgcttgagtctggccttctgaaagtctgatattgtttgttagcctgtttaaaagcctatatcttatgaacatctctaaa 642786  T
Q  205 tcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    | ||||||||||||||||||||||| || ||| |||||||||  |||||||||||||||||||    
T  642785 taagcaatgtgatctaagtttaaatggactagtgaactaatagttcaattaaattaaactctc 642723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 117 - 266
Target Start/End: Complemental strand, 10158174 - 10158025
Alignment:
Q  117 tactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtga 216  Q
    ||||||||||||||||||||| |||||||||||| ||||||||   | | ||||||||||| | |||| || ||| || |||||||||| ||||||||||    
T  10158174 tactttttaggcctgagtctggccttctgaaagcctgatatgacatgcttgcctgtttaaatgtctatatcttattaacatctttaaataagcaatgtga 10158075  T
Q  217 tctaagtttaaatagattagcgaactaatatatcaattaaattaaactct 266  Q
    |||||||||||||||| |||  ||||||||  ||||||||||||||||||    
T  10158074 tctaagtttaaatagactagtaaactaatagttcaattaaattaaactct 10158025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 95 - 272
Target Start/End: Original strand, 45338978 - 45339155
Alignment:
Q  95 ggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaa 194  Q
    ||||| || |||||||||| | |||||||||| | |||||||| |||| ||||||  ||||| |  |  |||||||||||||||||||||||||||| ||    
T  45338978 ggcctgcggcctgtcataggcatactttttagacatgagtctggccttttgaaagtctgatacggcctattagcctgtttaaaagcctatttcatatgaa 45339077  T
Q  195 tatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
     |||||| ||| ||||||  |||||||||||||||||| |||| ||||||||||||||||| |||| |||||| ||||    
T  45339078 catcttttaataagcaatacgatctaagtttaaatagactagcaaactaatatatcaattagattatactctcttttg 45339155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 169 - 272
Target Start/End: Complemental strand, 47295849 - 47295746
Alignment:
Q  169 ctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcc 268  Q
    ||||||||||| ||||||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||     
T  47295849 ctgtttaaaagtctatttcatatgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcatttatattaaactctct 47295750  T
Q  269 tttg 272  Q
    ||||    
T  47295749 tttg 47295746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 265
Target Start/End: Complemental strand, 3839504 - 3839366
Alignment:
Q  127 gcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagttta 226  Q
    |||| ||||||||||||| ||||| ||||| || | | |||||||||||||||||||| || ||| || |||||||||| ||||||||||||||||||||    
T  3839504 gcctaagtctgaccttcttaaagcctgatacgacctgatagcctgtttaaaagcctatatcttatgaacatctttaaataagcaatgtgatctaagttta 3839405  T
Q  227 aatagattagcgaactaatatatcaattaaattaaactc 265  Q
    || | | || ||||||||||  ||||||| |||||||||    
T  3839404 aacaaactaacgaactaatagttcaattagattaaactc 3839366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 272
Target Start/End: Original strand, 51370103 - 51370293
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 181  Q
    ||||| |||| ||||| | || |||||||||| |||||    || |||||||  ||||||||||||||  ||||| |  | | ||||||||| ||||| |    
T  51370103 aaggcttaagtctggcatgcggcctgtcataggcttacaaagtaagcctgagcttgaccttctgaaagtctgatacgtcctgctagcctgttaaaaagtc 51370202  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||||||||| || || ||||||| ||||||||||||||||||||| |||| || ||||| ||||||||||||| ||||||||||| ||||    
T  51370203 tatttcatatgaacatatttaaataagcaatgtgatctaagtttaactagactaacgaacaaatatatcaattagattaaactctcttttg 51370293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 7287380 - 7287248
Alignment:
Q  140 cttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcga 239  Q
    ||||||||||| ||||| | || | |||||||||||||| | ||| || ||| || |||||||||| ||||||||||||||||||||||| || ||  ||    
T  7287380 cttctgaaagcctgatacggtctgctagcctgtttaaaaacatatatcttatgaacatctttaaataagcaatgtgatctaagtttaaatggactaatga 7287281  T
Q  240 actaatatatcaattaaattaaactctcctttg 272  Q
    |||||||  ||||||||||||||||||| ||||    
T  7287280 actaatagttcaattaaattaaactctcttttg 7287248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 185 - 272
Target Start/End: Original strand, 27089687 - 27089774
Alignment:
Q  185 ttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    ||||||| ||||||||| ||| | |||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||||    
T  27089687 ttcatatgaatatcttttaataaacaatgtgatctaagtttagatagactagcgaactaatatatcaattagattaaactctcttttg 27089774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 253
Target Start/End: Complemental strand, 6213277 - 6213145
Alignment:
Q  121 ttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatcta 220  Q
    ||||||| |||||||||||||| ||||||||||||||| || |||| ||||||||||| | |||||||||| || || ||||||   | |||||||||||    
T  6213277 ttttaggtctgagtctgaccttttgaaagcttgatatggtctgttaacctgtttaaaaacttatttcatatgaacatttttaaaaatgtaatgtgatcta 6213178  T
Q  221 agtttaaatagattagcgaactaatatatcaat 253  Q
    ||||| ||| || |  |||||||||| ||||||    
T  6213177 agtttcaatcgacttacgaactaatagatcaat 6213145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 265
Target Start/End: Complemental strand, 17391850 - 17391691
Alignment:
Q  106 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 205  Q
    |||||||||||||||||||| || |||||||||| |||||||||  | || || || | ||  ||||||||||  |||||| |||| || ||||||||||    
T  17391850 tgtcatagacttactttttaagcatgagtctgactttctgaaagtctaatgtggtctgctaaactgtttaaaaaactattttatatgaacatctttaaat 17391751  T
Q  206 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 265  Q
     || |||||||| | | ||||||| || || ||||||||||||| ||| |||||||||||    
T  17391750 aagtaatgtgatattaatttaaatggactaacgaactaatatatgaataaaattaaactc 17391691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 272
Target Start/End: Complemental strand, 45756412 - 45756227
Alignment:
Q  87 ctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctattt 186  Q
    ||||| ||||||| || |||||||||| | |||||||| ||  |||||| |||||||||||||  ||||| |  | | |||||| |||||||| |||| |    
T  45756412 ctaagtctggcctgcggcctgtcataggcatactttttgggtttgagtcggaccttctgaaagtctgatacggcctgctagcctatttaaaagtctatat 45756313  T
Q  187 catataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    | ||| || || |||||||  |||||||||||||||||||||| || || |||| |||||  || |||| ||||||||||| ||||    
T  45756312 cttatgaacatatttaaatatgcaatgtgatctaagtttaaatggactaacgaattaatagttctattagattaaactctcttttg 45756227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 265
Target Start/End: Complemental strand, 8424643 - 8424476
Alignment:
Q  83 aggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcct 182  Q
    |||| |||| ||||||| || ||||||||||||||||||||||||| |||||||| |||||||||||| ||||| || | | |||||                 
T  8424643 aggcttaagtctggcctgcggcctgtcatagacttactttttaggcatgagtctgcccttctgaaagcctgatacgacctgctagcc------------- 8424557  T
Q  183 atttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 265  Q
      ||||||| || |||||||||| | |||||||||| || |||||||||| || ||||||||||||||| ||| |||||||||    
T  8424556 --ttcatatgaacatctttaaataaacaatgtgatcaaaatttaaatagactaacgaactaatatatcagttagattaaactc 8424476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 267
Target Start/End: Complemental strand, 25412466 - 25412322
Alignment:
Q  123 ttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaag 222  Q
    ||||||||||| ||| ||||||||||||  ||||    | |||||||||||||||||| ||| |  ||| || |||||||||| || ||||||||||||     
T  25412466 ttaggcctgagcctggccttctgaaagccggatacagcctgttagcctgtttaaaagcttatattttatgaacatctttaaataagtaatgtgatctaaa 25412367  T
Q  223 tttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    ||||||| || || | ||||||||  |||||||||||||||||||    
T  25412366 tttaaatggactaacaaactaatagttcaattaaattaaactctc 25412322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 264
Target Start/End: Original strand, 28397334 - 28397466
Alignment:
Q  132 agtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatag 231  Q
    |||||||||||||||||    || |||| | | |||| ||||||||| | ||||||||||||| |||||||||| || |||||  | |||||||||||||    
T  28397334 agtctgaccttctgaaaaacagacatgacctgctagcatgtttaaaaacttatttcatataaaaatctttaaataagtaatgtagtataagtttaaatag 28397433  T
Q  232 attagcgaactaatatatcaattaaattaaact 264  Q
    ||||||||||| ||| |||||| | ||||||||    
T  28397434 attagcgaacttatagatcaataagattaaact 28397466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 267
Target Start/End: Original strand, 46998056 - 46998160
Alignment:
Q  163 gttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaa 262  Q
    ||||||||||||||||||   |||||||| || |||||| ||| ||||||||||||||||||||||||||  | | || |||||||| ||||| ||||||    
T  46998056 gttagcctgtttaaaagctcgtttcatatgaacatcttttaataagcaatgtgatctaagtttaaatagaccaacaaattaatatattaattagattaaa 46998155  T
Q  263 ctctc 267  Q
    |||||    
T  46998156 ctctc 46998160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 272
Target Start/End: Complemental strand, 41158217 - 41158050
Alignment:
Q  105 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 204  Q
    ||||||||| | ||||||||||||||||| |||  |||||||||||   ||| |  | |||||||||||||||||||||  || ||| || ||||| ||     
T  41158217 ctgtcataggcctactttttaggcctgagcctggtcttctgaaagcccaatacggcctgttagcctgtttaaaagcctaaatcttatgaacatcttcaag 41158118  T
Q  205 tcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    | | ||||| ||||||||||||||| || ||| ||||| |||  ||||||| ||||||||||| ||||    
T  41158117 taaccaatgagatctaagtttaaatggactagagaacttatagttcaattagattaaactctcatttg 41158050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 271
Target Start/End: Complemental strand, 14346459 - 14346306
Alignment:
Q  118 actttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgat 217  Q
    |||||| |||| ||||| ||||||||||||||  | || ||| | | || ||||||| ||||| ||||||||| ||| |||||||||| || ||||||||    
T  14346459 acttttcaggcatgagtttgaccttctgaaagtctcatgtgacctgctaacctgttttaaagcatatttcataaaaacatctttaaataagtaatgtgat 14346360  T
Q  218 ctaagtttaaatagattagcgaactaatatatcaattaaattaaactctccttt 271  Q
     |||  ||||||||| |||| |||||||| |||| ||   ||||||||||||||    
T  14346359 ttaaagttaaatagactagcaaactaatagatcatttgtgttaaactctccttt 14346306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 29639755 - 29639674
Alignment:
Q  166 agcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatat 247  Q
    ||||| ||||||||| ||| |||||| ||||||||||||| | ||||||||| |||||||||||||| ||||||| ||||||    
T  29639755 agcctatttaaaagcatatatcatatgaatatctttaaataaacaatgtgatataagtttaaatagactagcgaattaatat 29639674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 7799201 - 7799316
Alignment:
Q  85 gcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctat 184  Q
    ||||||| |||| || || |||||||||| |||||||||| ||| |||| |||||||||||||||| |||||  | | | ||||||||||||||||||||    
T  7799201 gcctaagactggtctgcggcctgtcataggcttactttttgggcatgagcctgaccttctgaaagcctgata-cagctgctagcctgtttaaaagcctat 7799299  T
Q  185 ttcatataaatatcttt 201  Q
    || |||| || ||||||    
T  7799300 tttatatgaacatcttt 7799316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 272
Target Start/End: Complemental strand, 23757459 - 23757285
Alignment:
Q  97 cctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaata 196  Q
    |||||||||||| ||||||||  ||||||||| || ||| |||||| ||||| |  ||||||  |   ||||||||||||||  |||||| |||| || |    
T  23757459 cctacgacctgtgatagacttg-tttttaggcatgtgtccgaccttatgaaaacccgatatggcctaatagcctgtttaaaaatctattttatatgaaca 23757361  T
Q  197 tctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    ||||||||| |  |||||| |||||||||||||| | ||||||||||||| || ||| | | ||||||||| ||||    
T  23757360 tctttaaataatgaatgtggtctaagtttaaataaactagcgaactaatagataaatgagactaaactctcatttg 23757285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 272
Target Start/End: Original strand, 39737195 - 39737378
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 181  Q
    |||||||||| ||||| | || |||||||||  ||||| |||||||| ||| |||| |||||||||||| ||||| || | | ||| |||||||||||||    
T  39737195 aaggcctaagtctggcatgcggcctgtcatatgcttaccttttaggcatgactctggccttctgaaagcctgatacgacctgctagtctgtttaaaagcc 39737294  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    ||    ||||   |   ||||  | |||||||| ||||||||||||||||| || | ||| ||||||||||||| ||||||||||| ||||    
T  39737295 ta----atat---ttcatttacgtaagcaatgtaatctaagtttaaatagactaacaaacaaatatatcaattagattaaactctcttttg 39737378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 272
Target Start/End: Complemental strand, 11751756 - 11751654
Alignment:
Q  170 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcct 269  Q
    ||||||||||| ||| |  ||| || ||||||| || | ||||||||||||||||||||||||  ||| |||||||| |||||||| ||||||||||| |    
T  11751756 tgtttaaaagcttatatgttatgaacatctttacataaacaatgtgatctaagtttaaatagaccagcaaactaatagatcaattagattaaactctctt 11751657  T
Q  270 ttg 272  Q
    |||    
T  11751656 ttg 11751654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 1826603 - 1826495
Alignment:
Q  93 ctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatata 192  Q
    ||||| |||| |||||||||| ||||||||||||||||||| |||||||| ||||||| |  || |    | ||||||||||||||| |||||| ||||     
T  1826603 ctggcatacggcctgtcataggcttactttttaggcctgagcctgaccttatgaaagcctcgtacggcttgctagcctgtttaaaagtctattttatatg 1826504  T
Q  193 aatatcttt 201  Q
    |||||||||    
T  1826503 aatatcttt 1826495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 3022574 - 3022697
Alignment:
Q  106 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 205  Q
    ||||||||||||| |||||||| |||| |  ||| |||| ||||| |||| ||    | || |||||||||||| ||| ||||||| || ||||||||||    
T  3022574 tgtcatagacttattttttaggtctgaattcgacattctaaaagcctgatgtggcatgctaacctgtttaaaagtctacttcatatgaacatctttaaat 3022673  T
Q  206 cagcaatgtgatctaagtttaaat 229  Q
     |||||||||||| ||||||||||    
T  3022674 aagcaatgtgatcgaagtttaaat 3022697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 253
Target Start/End: Complemental strand, 4402416 - 4402245
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 181  Q
    |||||||||  ||||| | ||| ||||||||| ||||||||| ||  |||||| || | ||||||||  ||||||||||| | ||||||||||||||| |    
T  4402416 aaggcctaactctggcatgcgatctgtcataggcttacttttcagatctgagtttggctttctgaaaatttgatatgatctgctagcctgtttaaaagtc 4402317  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaat 253  Q
    || ||| ||| || || ||||||  || |||||||  |||| ||||||| | || | |||||||| ||||||    
T  4402316 taattcgtatgaacatttttaaacaagtaatgtgaaataaggttaaataaactaacaaactaataaatcaat 4402245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 272
Target Start/End: Original strand, 20953031 - 20953094
Alignment:
Q  209 caatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    ||||||| |||||||||||||||||||||  |||||||||||||||| ||| ||||||| ||||    
T  20953031 caatgtggtctaagtttaaatagattagcagactaatatatcaattagattgaactctcttttg 20953094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 267
Target Start/End: Original strand, 22863163 - 22863323
Alignment:
Q  105 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 204  Q
    ||||||||  |||||||||||| |||||||||| |||| ||||||  ||||  |  | | |||| ||||||||||  ||||| |||| || |||||||||    
T  22863163 ctgtcataagcttactttttagacctgagtctggccttatgaaagtctgattaggcctgctagcttgtttaaaagtttattttatatgaacatctttaaa 22863262  T
Q  205 tcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    | || ||||  ||  ||| |||||||||| |||||||||||| |||||| | |||||||||||    
T  22863263 taagtaatg--atacaaggttaaatagatcagcgaactaatagatcaatgatattaaactctc 22863323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 28397258 - 28397308
Alignment:
Q  14 tagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctg 64  Q
    ||||| |||||||||||||||||||||||| ||||||||||| ||| ||||    
T  28397258 taggggtgggaataggctaggccgagctaacctttgtaaggcctgagcctg 28397308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 756530 - 756461
Alignment:
Q  193 aatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaa 262  Q
    ||||||||||||| | |||| |||| ||||||||||||||||| | || ||||| |||||| ||||||||    
T  756530 aatatctttaaattaacaatatgatataagtttaaatagattaacaaattaatagatcaatgaaattaaa 756461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 37696801 - 37696700
Alignment:
Q  104 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 203  Q
    |||||| ||||| |||||||||||||| |||||| | |||| ||||||||||| || | ||||  |||||||||||| ||| || ||| || || |||||    
T  37696801 cctgtcgtagacctactttttaggcctaagtctggctttctaaaagcttgatacgacctgttaatctgtttaaaagcatatatcttatgaacatttttaa 37696702  T
Q  204 at 205  Q
    ||    
T  37696701 at 37696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 1825293 - 1825226
Alignment:
Q  194 atatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaa 262  Q
    |||||||| ||| |||||||| ||| || ||||||||||||||||||||||| |||| |||| ||||||    
T  1825293 atatcttttaataagcaatgtaatc-aactttaaatagattagcgaactaatttatctattagattaaa 1825226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 265
Target Start/End: Original strand, 35718394 - 35718494
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    |||| |||||||||| |||||||||||| | |||| || || |  || ||||||||||||| ||| || ||  |||||||||||||| | ||||||||||    
T  35718394 tagcttgtttaaaagtctatttcatatagacatctctagataattaacgtgatctaagtttcaatcgactaatgaactaatatatcattgaaattaaact 35718493  T
Q  265 c 265  Q
    |    
T  35718494 c 35718494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 6135915 - 6136018
Alignment:
Q  109 catagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcag 208  Q
    ||||||||||| ||| ||| |||| |||| | || ||||||  || ||||| | | || ||| |||||||||||||||||||| || |||||||||| ||    
T  6135915 catagacttacatttcaggtctgaatctggcgttttgaaagtctggtatgacctgctatcctatttaaaagcctatttcatatgaacatctttaaataag 6136014  T
Q  209 caat 212  Q
    ||||    
T  6136015 caat 6136018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 45756484 - 45756446
Alignment:
Q  17 ggatgggaataggctaggccgagctaagctttgtaaggc 55  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  45756484 ggatgggaataggctaggccgagcaaggctttgtaaggc 45756446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 4e-56; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 14 - 261
Target Start/End: Complemental strand, 41016098 - 41015852
Alignment:
Q  14 tagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatag 113  Q
    |||||||| |||||||||| |||||||||||||||| ||||| ||| ||||  |||||||       ||||||||||||||||||| || ||||||||||    
T  41016098 tagggatgagaataggctaagccgagctaagctttggaaggcctgagcctgacctgccaacttttttgaaggcctaagcctggcctgcggcctgtcatag 41015999  T
Q  114 acttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatg 213  Q
     ||||||||||||||||||||||| |||| ||||||  |||||||  |   |||| ||||||||||| ||||| |||| || |||||| | |||||||||    
T  41015998 gcttactttttaggcctgagtctggccttatgaaagtctgatatggcctactagcatgtttaaaagcatattttatatgaacatcttt-agtcagcaatg 41015900  T
Q  214 tgatctaagtttaaatagattagcgaactaatatatcaattaaattaa 261  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||    
T  41015899 tgatctaagtttaaatagactaacgaactaatatatcaattaaattaa 41015852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 105 - 272
Target Start/End: Original strand, 25685208 - 25685375
Alignment:
Q  105 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 204  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||||||||| || |   ||||||||||||||||||||||||||| ||||| ||||||    
T  25685208 ctgtcatagacttactttttaggtctgggtctggccttctgaaagcttgatacgacctactagcctgtttaaaagcctatttcatatgaatatatttaaa 25685307  T
Q  205 tcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    | |||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  25685308 taagcaatatgatctaagtttaaatagactagcgaactaatatatcaattagattaaactctcttttg 25685375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 14 - 272
Target Start/End: Complemental strand, 32556032 - 32555774
Alignment:
Q  14 tagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatag 113  Q
    |||||||||||||| | |||| ||||||| |||||| ||||| ||| | | || ||| ||       ||||||| ||| ||||| | |||||||||||||    
T  32556032 tagggatgggaatatgttaggtcgagctaggctttgcaaggcctgagcttcgtttgctaattcttttgaaggccaaagtctggcatgcgacctgtcatag 32555933  T
Q  114 acttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatg 213  Q
     |||||||||||||| ||||||||||||||||||||| ||||| | || | |||||||||||||||||| ||| |||| || || ||||||| |||||||    
T  32555932 gcttactttttaggcttgagtctgaccttctgaaagcctgatacggtctgctagcctgtttaaaagcctgttttatatgaacatttttaaataagcaatg 32555833  T
Q  214 tgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    ||||||||||||||||||| ||| |||| ||||||||||||| ||| ||||||| ||||    
T  32555832 tgatctaagtttaaatagactagtgaacaaatatatcaattagatttaactctcttttg 32555774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 272
Target Start/End: Original strand, 5034004 - 5034174
Alignment:
Q  102 gacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatcttt 201  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||| ||||| | |  | | ||||||||||||||||||||||||| || || |||    
T  5034004 gacctgtcacaggcttactttttaggcctgagtctgaccttctgaaagcctgatacggtatgcttgcctgtttaaaagcctatttcatatgaacatattt 5034103  T
Q  202 aaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||| ||||||||  |||||||||| ||||    
T  5034104 aaataagcaatgtgatcaaagtttaaatagactagcgaactaatagatcaattaggttaaactctcttttg 5034174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 13 - 272
Target Start/End: Original strand, 9270969 - 9271230
Alignment:
Q  13 ttagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcata 112  Q
    |||||| || ||||||||||||||||| || |||||| ||||  ||| ||||  ||| |||       ||||||||||||||||||| || ||| |||||    
T  9270969 ttaggggtgagaataggctaggccgagttaggctttgcaaggtctgagcctgacctgtcaaatgttttgaaggcctaagcctggcctgcggcctatcata 9271068  T
Q  113 ga--cttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagca 210  Q
     |  |||||||||||||| |||||||||||||| |||| | ||||| |  | | || |||||||||| ||||||||||||| || |||||||||| ||||    
T  9271069 taggcttactttttaggcttgagtctgaccttccgaaatcctgatacggcctgctaacctgtttaaaggcctatttcatatgaacatctttaaataagca 9271168  T
Q  211 atgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||||||||| ||||||||||| ||||||||||| |||| ||||| |||||| |||| ||||    
T  9271169 atgtgatctaggtttaaatagactagcgaactaaaatattaattagattaaaatctcttttg 9271230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 32420178 - 32420435
Alignment:
Q  15 agggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnn-gaaggcctaagcctggcctacgacctgtcatag 113  Q
    |||| ||||||||||||||||||||||| |||||| ||||| | | ||||| |||||||        ||| || || ||||||| | || ||||||||||    
T  32420178 aggggtgggaataggctaggccgagctaggctttgcaaggcctaagcctggcctgccaatttttgatgaatgcataggcctggcttgcggcctgtcatag 32420277  T
Q  114 acttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatg 213  Q
     ||| |||||||||||| |||||| |||||||||||| | ||| |  | | |||||||||||||||||||| ||||||||| || ||||||| |||||||    
T  32420278 gcttgctttttaggcctaagtctggccttctgaaagcct-atacggcctgctagcctgtttaaaagcctatatcatataaacatttttaaataagcaatg 32420376  T
Q  214 tgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    ||||||||||||||| | | |||| ||||||||||||||||  ||||||||||| ||||    
T  32420377 tgatctaagtttaaacaaactagcaaactaatatatcaattggattaaactctcttttg 32420435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 85 - 272
Target Start/End: Original strand, 42672655 - 42672842
Alignment:
Q  85 gcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctat 184  Q
    |||||| ||| |||| || |||||||||| |||||||||||||| |||| ||| |||||||||||| ||||| |  | | || | ||||||||||| | |    
T  42672655 gcctaaacctagcctgcggcctgtcataggcttactttttaggcatgagcctggccttctgaaagcctgatacggcctgctaacttgtttaaaagcttgt 42672754  T
Q  185 ttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    ||||||| || ||||| |||| ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  42672755 ttcatatcaacatcttaaaataagcaatgtgatataagtttaaatagactagcgaactaatatatcaattagattaaactctcttttg 42672842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 106 - 272
Target Start/End: Original strand, 39727153 - 39727319
Alignment:
Q  106 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 205  Q
    |||||||| ||| |||||||||| ||||| |  | |||||||||| ||||||| || | |||||||||||||||||||||| |||| |  || |||||||    
T  39727153 tgtcataggctttctttttaggcatgagtatagctttctgaaagcctgatatggtctgctagcctgtttaaaagcctattttatatgagcatatttaaat 39727252  T
Q  206 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
     |||||||| ||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||||    
T  39727253 gagcaatgttatctaagtttaaatagactagcgaactaatatatcaattagattaaattctcttttg 39727319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 82 - 260
Target Start/End: Complemental strand, 18331011 - 18330833
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 181  Q
    ||||||||||||| || | ||||||| |||||||||||||||||||||||||  ||  ||||||||||  || || || | | |||||||||||||||||    
T  18331011 aaggcctaagcctagcatgcgacctgacatagacttactttttaggcctgagcttggtcttctgaaagtctgttacgacctgctagcctgtttaaaagcc 18330912  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaatta 260  Q
    ||| |||||| || |||||||||| | ||||||||| ||||||||||||||| ||| ||| |||| |||||||| ||||    
T  18330911 tatatcatatgaacatctttaaataaacaatgtgatataagtttaaatagatcagccaaccaataaatcaattagatta 18330833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 104 - 272
Target Start/End: Complemental strand, 40727343 - 40727175
Alignment:
Q  104 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 203  Q
    |||||||||| | ||||||||||| | |||||||  ||||| ||||||||||| | || |||| | ||||||||||||||| |  ||| || ||||||||    
T  40727343 cctgtcataggcctactttttaggtccgagtctggtcttctaaaagcttgatacggtctgttaacatgtttaaaagcctatattttatgaacatctttaa 40727244  T
Q  204 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    || ||||||||||||||||||||||| || || ||||||||||  ||||||||||||||||||| ||||    
T  40727243 ataagcaatgtgatctaagtttaaatggactaacgaactaatagttcaattaaattaaactctcttttg 40727175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 272
Target Start/End: Original strand, 9479205 - 9479368
Alignment:
Q  109 catagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcag 208  Q
    ||||| ||||| |||||||| ||||||||||||| ||||||| | ||| | || | |||| ||||||||||  |||||||||| || || ||||||| ||    
T  9479205 cataggcttacattttaggcatgagtctgaccttttgaaagccttatacggtctgctagcatgtttaaaagaatatttcatatgaacatatttaaataag 9479304  T
Q  209 caatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    ||||| |||||| ||||||||||| ||||  ||||||||||||||||  ||||| |||| ||||    
T  9479305 caatgcgatctatgtttaaatagactagctgactaatatatcaattagtttaaattctcttttg 9479368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 272
Target Start/End: Complemental strand, 34654044 - 34653942
Alignment:
Q  170 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcct 269  Q
    |||||||||| |||||| || | ||||| ||||||| || |||||||||||| |||||||||| |||||||||||||||||||| | ||||||||||| |    
T  34654044 tgtttaaaagtctatttaatgtgaatatatttaaataagtaatgtgatctaattttaaatagactagcgaactaatatatcaatgagattaaactctctt 34653945  T
Q  270 ttg 272  Q
    |||    
T  34653944 ttg 34653942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 82 - 267
Target Start/End: Original strand, 25072577 - 25072762
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 181  Q
    ||||||||||||||| || || | | |||||  |||||||||||||| | ||||||||||| |||| |  ||||  |  | | |||||||||||||| ||    
T  25072577 aaggcctaagcctggtctgcggcatatcatatgcttactttttaggcttaagtctgaccttatgaaggtctgattaggcctgctagcctgtttaaaatcc 25072676  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    |||||||||| || |||||||||| || ||||||||  ||| ||||||||| || ||| |||||| |||||| | |||||||||||    
T  25072677 tatttcatatgaacatctttaaataagtaatgtgattcaaggttaaatagactaacgagctaatagatcaatgatattaaactctc 25072762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 41937967 - 41937807
Alignment:
Q  104 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 203  Q
    |||||||||| | |||||||||| |||||||||| ||||||||||| || ||| ||   ||||| ||||||||||||  || || ||| || ||||||||    
T  41937967 cctgtcataggcctactttttagccctgagtctggccttctgaaagtttaatacgacatgttagtctgtttaaaagctcatatcttatgaacatctttaa 41937868  T
Q  204 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    || | ||||| ||| |||||||||||||| ||| || ||||||  ||||||| ||||||||    
T  41937867 ataaacaatgcgatttaagtttaaatagactagagatctaatagttcaattatattaaact 41937807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 272
Target Start/End: Complemental strand, 42766779 - 42766622
Alignment:
Q  115 cttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgt 214  Q
    |||| ||||||| ||||  |||| |||||| ||||  ||||||| || | ||| |||||| ||||  |||| ||||| ||||||||||||| || ||  |    
T  42766779 cttattttttagacctgcatctggccttctaaaagtctgatatggtctgctagtctgtttgaaagtttattacatatgaatatctttaaataagtaaatt 42766680  T
Q  215 gatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||||||| ||||||||| |||||||||| ||||||||| | ||||| ||||||||||    
T  42766679 gatctaaggttaaatagactagcgaactattatatcaatgagattaatctctcctttg 42766622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 265
Target Start/End: Complemental strand, 22166239 - 22166057
Alignment:
Q  83 aggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaag-cttgatatgatccgttagcctgtttaaaagcc 181  Q
    |||| |||| || ||| ||||| ||||||||||||| |||||| ||||||||||| | |   ||||| || | | ||| | |||||| || |||||| ||    
T  22166239 aggcataagtcttgccgacgacttgtcatagacttattttttaagcctgagtctggcatgtcgaaagtctggttttga-ctgttagcttggttaaaatcc 22166141  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 265  Q
    ||||||||||||| |||||||||| |  |||||||| ||||||| |||  | || |||||||||| ||||||||||||||||||    
T  22166140 tatttcatataaacatctttaaataaataatgtgatttaagttttaatcaactaacgaactaatagatcaattaaattaaactc 22166057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 265
Target Start/End: Complemental strand, 22224946 - 22224764
Alignment:
Q  83 aggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaag-cttgatatgatccgttagcctgtttaaaagcc 181  Q
    |||| |||| || ||| ||||| ||||||||||||| |||||| ||||||||||| | |   ||||| || | | ||| | |||||| || |||||| ||    
T  22224946 aggcataagtcttgccgacgacttgtcatagacttattttttaagcctgagtctggcatgtcgaaagtctggttttga-ctgttagcttggttaaaatcc 22224848  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 265  Q
    ||||||||||||| |||||||||| |  |||||||| ||||||| |||  | || |||||||||| ||||||||||||||||||    
T  22224847 tatttcatataaacatctttaaataaataatgtgatttaagttttaatcaactaacgaactaatagatcaattaaattaaactc 22224764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 266
Target Start/End: Complemental strand, 21144707 - 21144543
Alignment:
Q  104 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatata--aatatcttt 201  Q
    |||||||||| | |||||||||||| ||||| |||||||||||||| |||||| |    | || | |||||||||| |||| |  ||||  || ||||||    
T  21144707 cctgtcataggcctactttttaggcatgagtttgaccttctgaaagtttgatacggcatgctaacatgtttaaaagtctatatgttatatgaacatcttt 21144608  T
Q  202 aaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactct 266  Q
    ||||    |||||||| |||||||||||||| ||| ||||||||| |||||||| ||||||||||    
T  21144607 aaatacttaatgtgatataagtttaaatagactagtgaactaatagatcaattagattaaactct 21144543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 22541181 - 22541286
Alignment:
Q  116 ttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtg 215  Q
    ||||||||||| || |||| | ||| | ||||||   ||||||||| ||||| ||||||||||  ||||||||||| ||||||||||||| |  ||||||    
T  22541181 ttactttttagacccgagttttaccatttgaaagtcagatatgatctgttagtctgtttaaaaatctatttcatatgaatatctttaaataaataatgtg 22541280  T
Q  216 atctaa 221  Q
    ||||||    
T  22541281 atctaa 22541286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 44073610 - 44073529
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaata 246  Q
    |||||||||||||| | |||||||||| ||||| ||||||| || ||| |||| | ||||| |||||| |||||||||||||    
T  44073610 tagcctgtttaaaaacatatttcatatgaatatttttaaataagtaatatgatatgagtttgaatagaatagcgaactaata 44073529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 272
Target Start/End: Original strand, 38566540 - 38566699
Alignment:
Q  110 atagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagc 209  Q
    ||||||||||||||||||| ||||||||||||||| ||||  |   ||||   | |||  |||||||||  ||||||||||| ||   | |||||| ||     
T  38566540 atagacttactttttaggcatgagtctgaccttctaaaagtctctcatgagttgctagtttgtttaaaaatctatttcatatgaa---cattaaataagt 38566636  T
Q  210 aatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    | |||||||||| ||||||||||||  | |||||||| |||||| | ||||||||||| ||||    
T  38566637 attgtgatctaaatttaaatagattgtctaactaatagatcaatgagattaaactctcttttg 38566699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 39725444 - 39725524
Alignment:
Q  106 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctattt 186  Q
    ||||| || |||||||||||||| ||||| |  |||||||||||| ||||| | || |||||| |||||||||||||||||    
T  39725444 tgtcacaggcttactttttaggcatgagtatagccttctgaaagcctgatacggtctgttagcatgtttaaaagcctattt 39725524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 28032113 - 28032058
Alignment:
Q  174 taaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaat 229  Q
    |||||||||||||||| | || |||||||||| ||||||||| |||||||||||||    
T  28032113 taaaagcctatttcatgtgaacatctttaaataagcaatgtgttctaagtttaaat 28032058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 37155714 - 37155631
Alignment:
Q  168 cctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatca 251  Q
    |||||||||||||||||||||||  || |||||||||| || ||| ||||| ||| ||||||||| || ||| |||||| ||||    
T  37155714 cctgtttaaaagcctatttcatacgaacatctttaaataagtaatatgatccaaggttaaatagactaacgagctaatagatca 37155631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 267
Target Start/End: Complemental strand, 29171757 - 29171597
Alignment:
Q  109 catagacttactttttaggcctgagtctgaccttctgaaagcttga-tatgatccgttagcctgtttaaaagcctatttcatat--aaatatctttaaat 205  Q
    |||| |||||||||||||| |||||||||||||| ||||||| | | |||| || | |||  ||||||||||||||||||||||  | |||| |||||||    
T  29171757 cataaacttactttttaggtctgagtctgaccttatgaaagcctcattatg-tctgctagtatgtttaaaagcctatttcatatgaacatatatttaaat 29171659  T
Q  206 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
     || || ||||||  |  ||||||||| |||||| |||||| ||| |  | |||||||||||    
T  29171658 aagtaacgtgatcccaagttaaatagactagcgagctaataaatcgacgatattaaactctc 29171597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 232
Target Start/End: Original strand, 32684169 - 32684271
Alignment:
Q  130 tgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaat 229  Q
    ||||| ||||||  |||||| || |||||||| | || ||||||||||||| |||||||||| |   ||||||||| |  |||||||||||| |||||||    
T  32684169 tgagtttgacctattgaaagtttcatatgatctgctatcctgtttaaaagcatatttcatatgaccgtctttaaataaataatgtgatctaaatttaaat 32684268  T
Q  230 aga 232  Q
    |||    
T  32684269 aga 32684271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 39723574 - 39723654
Alignment:
Q  106 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctattt 186  Q
    |||||||| |||||||||||||| ||||| |  |||||||||||| ||||| | || | |||| | |||||||||||||||    
T  39723574 tgtcataggcttactttttaggcatgagtatagccttctgaaagcctgatacggtctgctagcatatttaaaagcctattt 39723654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 18793580 - 18793680
Alignment:
Q  105 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 204  Q
    |||||||||||||||||||||||  ||||  ||  ||||||||||| ||||||| |  ||||  || ||||||||| |||| ||||| || || ||||||    
T  18793580 ctgtcatagacttactttttaggtttgagattggtcttctgaaagcctgatatggtatgttaatctatttaaaagcttattgcatatgaacatatttaaa 18793679  T
Q  205 t 205  Q
    |    
T  18793680 t 18793680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 18879741 - 18879693
Alignment:
Q  224 ttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||||| || || ||||||||||  ||||||||||||||||||||||||    
T  18879741 ttaaatggactaacgaactaatagttcaattaaattaaactctcctttg 18879693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 7e-55; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 36439739 - 36439996
Alignment:
Q  15 agggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcataga 114  Q
    |||| |||||||||| ||||||||| || |||||| ||||| ||| |||| |||| |||       ||||| ||||| |||| || ||  |||||||| |    
T  36439739 aggggtgggaataggttaggccgagttaggctttgcaaggcctgagcctgatctgtcaaattttatgaaggactaagtctggtctgcggtctgtcataaa 36439838  T
Q  115 cttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgt 214  Q
    ||||||||||||| |||||||| |||||||||||| |||||| | || | |||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  36439839 cttactttttaggtctgagtctaaccttctgaaagtttgatacggtctgctagcctgtttaaaagcatatttcatataaacatctttaaataagcaatgt 36439938  T
Q  215 gatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
     ||||||||||||||||| || |||||||||||||||| || ||||||||||| ||||    
T  36439939 tatctaagtttaaatagactaacgaactaatatatcaaatagattaaactctcttttg 36439996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 88 - 272
Target Start/End: Complemental strand, 40202055 - 40201871
Alignment:
Q  88 taagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttc 187  Q
    ||||| |||||| || |||||||||||||||||||||||||||||||||| |||||||||||  ||||| | |  | ||| ||||||||||| |||||||    
T  40202055 taagcttggcctgcggcctgtcatagacttactttttaggcctgagtctggccttctgaaagtctgatacggtatgctagtctgtttaaaagtctatttc 40201956  T
Q  188 atataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    || | || |||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||||||| ||| ||||||| ||||    
T  40201955 atttcaacatcttttaataagcaatgtgatctaagtttaaatagactagcaaactaatatatcaattagattgaactctcttttg 40201871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 6391652 - 6391491
Alignment:
Q  105 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 204  Q
    ||||||||||||||||||||||||||||||| | |||||||||||  ||||| |    | |||||| |||||  ||||||||||||| || |||||||||    
T  6391652 ctgtcatagacttactttttaggcctgagtcaggccttctgaaagtctgatacggcttgctagcctatttaacggcctatttcatatgaacatctttaaa 6391553  T
Q  205 tcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactct 266  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  6391552 taagcaatgtgatctaagtttaaatagactagcgaactaatatatcaattagattaaactct 6391491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 104 - 272
Target Start/End: Original strand, 35319211 - 35319379
Alignment:
Q  104 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 203  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||  ||||| |  | | ||||||||||||||||||  |||| ||||| || |||||    
T  35319211 cctgtcataggcttactttttaggcctgagtctgaccttttgaaagtctgatacggcctgctagcctgtttaaaagcctgcttcagataaacatatttaa 35319310  T
Q  204 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    || |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||| |||| ||||    
T  35319311 ataagcaatgtgatctaagtttaaatagactagggaactaatatatcaattagattaaagtctcttttg 35319379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 40417541 - 40417402
Alignment:
Q  116 ttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtg 215  Q
    ||||||||||||| ||| |||||| |||||||||| ||||| | || | || |||||||||||||||||||||||| || |||||||||| |||||||||    
T  40417541 ttactttttaggcatgaatctgacattctgaaagcctgatacggtctgctaacctgtttaaaagcctatttcatatgaacatctttaaataagcaatgtg 40417442  T
Q  216 atctaagtttaaatagattagcgaactaatatatcaatta 255  Q
    ||| ||||||||||||| ||| ||||||||||||||||||    
T  40417441 atcgaagtttaaatagactagtgaactaatatatcaatta 40417402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 82 - 272
Target Start/End: Complemental strand, 28207546 - 28207357
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 181  Q
    |||| |||||||||| || || |||||||||| | |||||||||||||||||  |||||||||||||||  |||| || | | ||||||||||||||| |    
T  28207546 aaggtctaagcctggtctgcggcctgtcataggcctactttttaggcctgagcttgaccttctgaaagccagatacgacctgctagcctgtttaaaagtc 28207447  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    ||| |  ||| || || ||||||| ||||||||||||||||||||||| || |||||||||||||  ||||||||||||||||||| ||||    
T  28207446 tatatt-tatgaacatttttaaataagcaatgtgatctaagtttaaatggactagcgaactaatagttcaattaaattaaactctcttttg 28207357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 81 - 267
Target Start/End: Original strand, 40514657 - 40514844
Alignment:
Q  81 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 180  Q
    |||||||||| ||||  ||||| | ||||||| |||||| ||||||| ||||| |||||||||||||||  ||||||| || | ||| ||||||||||||    
T  40514657 gaaggcctaaacctgatctacggcttgtcatatacttacattttaggtctgagcctgaccttctgaaagtctgatatggtctgctagtctgtttaaaagc 40514756  T
Q  181 ctatttcatataaatatctttaaatcagcaatgtg--atctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    | ||||||||| || |||||||||| | |||||||  || |||||||||||| | ||||||| |||||||||||||| |||||||||||    
T  40514757 c-atttcatatgaacatctttaaataaacaatgtgatatttaagtttaaatatactagcgaagtaatatatcaattagattaaactctc 40514844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 81 - 264
Target Start/End: Complemental strand, 8570461 - 8570278
Alignment:
Q  81 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 180  Q
    |||||||||||  || | | ||||||||||||  ||||||||| |||| ||| |||  | |||||||||||| |||||||| | |||||||||||||| |    
T  8570461 gaaggcctaagtttgacatgcgacctgtcatatgcttacttttaaggcatgaatcttgctttctgaaagcttaatatgatctgctagcctgtttaaaaac 8570362  T
Q  181 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    ||||||||||| ||  | ||||||| || |||||||||||| |||||||||| || | ||||||||||||||||| ||||||||    
T  8570361 ctatttcatatgaacgtatttaaataagtaatgtgatctaaatttaaatagactaacaaactaatatatcaattagattaaact 8570278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 39981544 - 39981683
Alignment:
Q  116 ttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtg 215  Q
    ||||||||||||| |||||||| | |||||||||| ||||| |  | | || |||||||||||||||||||||||| || || ||||||| |||||||||    
T  39981544 ttactttttaggcatgagtctggcattctgaaagcctgatacggcctgctaacctgtttaaaagcctatttcatatgaacatatttaaataagcaatgtg 39981643  T
Q  216 atctaagtttaaatagattagcgaactaatatatcaatta 255  Q
    ||| ||||||||||||| ||| ||||||||||||||||||    
T  39981644 atcgaagtttaaatagactagtgaactaatatatcaatta 39981683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 115 - 272
Target Start/End: Original strand, 42108442 - 42108599
Alignment:
Q  115 cttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgt 214  Q
    |||||||||||||| ||||| || |||||||||||| | ||| |    ||||||||||||||||| || |||  ||| || |||||||||| |||||| |    
T  42108442 cttactttttaggcttgagtttggccttctgaaagcctaatacggcatgttagcctgtttaaaagtctgttttgtattaacatctttaaataagcaatat 42108541  T
Q  215 gatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||| ||||||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  42108542 gatccaagtttaaatagactagcgaactaatatatcaattagattaaactctcttttg 42108599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 141 - 267
Target Start/End: Original strand, 28022690 - 28022816
Alignment:
Q  141 ttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaa 240  Q
    ||||||||| ||||||| ||  | ||||||||||||||| |||| |||||| || |||||||||| |||||||||||||||||| |||||||||||||||    
T  28022690 ttctgaaagtttgatataattggatagcctgtttaaaagtctatatcatatgaacatctttaaataagcaatgtgatctaagttaaaatagattagcgaa 28022789  T
Q  241 ctaatatatcaattaaattaaactctc 267  Q
    |||||  ||||| || |||||||||||    
T  28022790 ctaattgatcaactagattaaactctc 28022816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 272
Target Start/End: Original strand, 333637 - 333774
Alignment:
Q  135 ctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagatt 234  Q
    |||||||||||||||| | ||| || | | |||||||||||||||||||| || ||| |||| |||||||| ||||||||||||||| ||||||| || |    
T  333637 ctgaccttctgaaagcctaatacgacctgctagcctgtttaaaagcctatatcttatgaatacctttaaataagcaatgtgatctaaatttaaatggact 333736  T
Q  235 agcgaactaatatatcaattaaattaaactctcctttg 272  Q
    ||||||||||||  ||||||| ||||||||||| ||||    
T  333737 agcgaactaatagttcaattagattaaactctcttttg 333774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 272
Target Start/End: Complemental strand, 12580320 - 12580153
Alignment:
Q  105 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 204  Q
    ||||||||| | ||||||||| | |||||  ||||||||||||||  |||||   ||   |||||||| ||||||||||| || ||| || |||||||||    
T  12580320 ctgtcataggcctactttttaagtctgagcatgaccttctgaaagtctgatacagtctactagcctgtctaaaagcctatatcttatgaacatctttaaa 12580221  T
Q  205 tcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    | ||||||||||||||||||||||| || |||||||||||||  ||||||| ||||||||||| ||||    
T  12580220 taagcaatgtgatctaagtttaaatggactagcgaactaatagttcaattagattaaactctcttttg 12580153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 85 - 272
Target Start/End: Original strand, 16885344 - 16885531
Alignment:
Q  85 gcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctat 184  Q
    ||||||| ||||| | || |||||||||  | ||||||||| || |||||||| |||||||||||| ||||| |  | |  |||||||||||||| ||||    
T  16885344 gcctaagtctggcttgcggcctgtcatatgcctactttttatgcatgagtctggccttctgaaagcctgatacggcctgcgagcctgtttaaaagtctat 16885443  T
Q  185 ttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
     || ||| || |||||||||| |||||||| |||||||||||||| ||  ||||||||||||  ||||||| ||||||||||| ||||    
T  16885444 atcttatgaacatctttaaataagcaatgtaatctaagtttaaatggaccagcgaactaatagttcaattagattaaactctcttttg 16885531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 81 - 266
Target Start/End: Original strand, 29570964 - 29571138
Alignment:
Q  81 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 180  Q
    |||||| |||| ||||||||||  ||||||||||||||||||||||||||||  |||||||||||||||| ||||| |  | | ||||  ||||||||||    
T  29570964 gaaggcttaagtctggcctacggtctgtcatagacttactttttaggcctgaacctgaccttctgaaagcctgatacgggctgctagctcgtttaaaagc 29571063  T
Q  181 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactct 266  Q
    |||||| |||| || ||||| |||| |||||           |||||||||| |||||||||||||||||||||| ||||||||||    
T  29571064 ctattttatatgaacatcttcaaataagcaa-----------tttaaatagactagcgaactaatatatcaattagattaaactct 29571138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 272
Target Start/End: Complemental strand, 41387118 - 41386971
Alignment:
Q  125 aggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtt 224  Q
    |||||| || |||||||| ||||||| |||||||    |  ||||||||||||||| |||||||||| || ||||||| || ||||| ||||| ||||||    
T  41387118 aggcctaagcctgaccttgtgaaagcctgatatggcttgcaagcctgtttaaaagcttatttcatatgaacatctttatataagcaaagtgatataagtt 41387019  T
Q  225 taaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||||||| |||||||||||||||||||||| || |||||||| ||||    
T  41387018 taaatagactagcgaactaatatatcaattagatcaaactctcttttg 41386971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 106 - 272
Target Start/End: Original strand, 15530002 - 15530168
Alignment:
Q  106 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 205  Q
    |||||||| | |||||||||||||||||  || ||||| |||||  ||||| | || | |||||||||||||||||||| || ||| || ||||||||||    
T  15530002 tgtcataggcctactttttaggcctgagcttggccttccgaaagtctgatacggtctgctagcctgtttaaaagcctatatcttatgaacatctttaaat 15530101  T
Q  206 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
     | ||||||||||||| ||||||| || | |||||||||||  ||||||| ||||||||||| ||||    
T  15530102 aaacaatgtgatctaaatttaaatggactggcgaactaatagttcaattagattaaactctcttttg 15530168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 272
Target Start/End: Complemental strand, 19298272 - 19298104
Alignment:
Q  105 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatcttt-aa 203  Q
    |||| |||| |||| ||||||||| | ||||||||||||||||||  ||||| |    | ||||||||||||||||||||||  ||| || || ||| ||    
T  19298272 ctgtgataggcttattttttaggcttaagtctgaccttctgaaagtctgatacgtcttgctagcctgtttaaaagcctatttagtatgaacattttttaa 19298173  T
Q  204 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    || |||||||||||||||||||||||||| || | |||||||||||||| || ||||||||||| ||||    
T  19298172 ataagcaatgtgatctaagtttaaatagactacctaactaatatatcaactagattaaactctcttttg 19298104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 163 - 267
Target Start/End: Complemental strand, 17743049 - 17742945
Alignment:
Q  163 gttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaa 262  Q
    ||||| |||||||||||| || ||||||| |||||||||  || ||||||||||| ||||||| |||||| |||| ||||||||||||||||| ||||||    
T  17743049 gttagtctgtttaaaagcataattcatatgaatatcttttgataagcaatgtgatttaagtttcaatagactagcaaactaatatatcaattagattaaa 17742950  T
Q  263 ctctc 267  Q
    |||||    
T  17742949 ctctc 17742945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 165 - 266
Target Start/End: Complemental strand, 16844658 - 16844557
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    |||||||||||||||| ||| || ||| || |||||||||| || |||||||||||||||||||| || |||||||||||||  ||||||| ||||||||    
T  16844658 tagcctgtttaaaagcatatatcttatgaacatctttaaataagaaatgtgatctaagtttaaatggactagcgaactaatagttcaattagattaaact 16844559  T
Q  265 ct 266  Q
    ||    
T  16844558 ct 16844557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 272
Target Start/End: Complemental strand, 22859866 - 22859698
Alignment:
Q  104 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 203  Q
    |||||||||||||||||||||||| ||||||||| |||| ||| ||| ||||  |  | | |||| | ||||||| |||||||||||| || ||||||||    
T  22859866 cctgtcatagacttactttttaggtctgagtctggccttatgagagcctgattaggcctgctagcatttttaaaaacctatttcatatgaacatctttaa 22859767  T
Q  204 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    || || || |||||| ||| ||||| ||| || ||| |||||| |||||| | ||||||||||| ||||    
T  22859766 ataagtaaggtgatccaaggttaaaaagactaacgagctaatagatcaatgatattaaactctcttttg 22859698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 266
Target Start/End: Original strand, 38876548 - 38876700
Alignment:
Q  115 cttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgt 214  Q
    ||||||||||||| || | || | |||||||||||  ||||| | |  | |||||||||||||||| || ||||||| || |||||||||| | |||||     
T  38876548 cttactttttaggtctaaatccggccttctgaaagtatgatacggtttgctagcctgtttaaaagcgtacttcatatgaacatctttaaataaacaatga 38876647  T
Q  215 gatctaagtttaaatagattagcgaactaata-tatcaattaaattaaactct 266  Q
    ||||||||||||||||||  ||| |||||||| ||||||||| ||||||||||    
T  38876648 gatctaagtttaaatagaccagcaaactaatattatcaattagattaaactct 38876700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 165 - 264
Target Start/End: Complemental strand, 11422766 - 11422667
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    ||||||| |||||| | |||||| ||| || || ||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||| ||||||||    
T  11422766 tagcctgattaaaaacatatttcttatgaacatttttaaataagcattgtgatctaagtttaaatagattagcgaatttatatatcaattagattaaact 11422667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 39963915 - 39964011
Alignment:
Q  170 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactct 266  Q
    |||||||||| |||| |||||| || |||||||||| || ||| | ||||||||||||||||| || |||||||||| ||||| || ||||||||||    
T  39963915 tgtttaaaagactatatcatatgaacatctttaaataagtaatataatctaagtttaaatagactaacgaactaataaatcaactagattaaactct 39964011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 18988527 - 18988603
Alignment:
Q  170 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaata 246  Q
    |||||||||| ||||||||||| ||||||||||||  || |||||||| |||||||||| | || ||| ||||||||    
T  18988527 tgtttaaaagtctatttcatatcaatatctttaaacaagtaatgtgatttaagtttaaacaaatcagcaaactaata 18988603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 14830573 - 14830671
Alignment:
Q  169 ctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    |||||||||||| ||| |  ||| || |||||||| | |||||| |||||||||||||||| || |||| ||||||||  ||||||  |||||||||||    
T  14830573 ctgtttaaaagcatatattttatgaacatctttaagtaagcaatatgatctaagtttaaatggactagcaaactaatagttcaattggattaaactctc 14830671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 32906826 - 32906893
Alignment:
Q  196 atctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    |||||||||| | ||||||||| |||||||||||||  ||||||||| ||| ||||||| |||||||||    
T  32906826 atctttaaataaacaatgtgatataagtttaaataggctagcgaact-atagatcaatttaattaaact 32906893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 253
Target Start/End: Original strand, 35412342 - 35412422
Alignment:
Q  173 ttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaat 253  Q
    ||||||| ||||||||| | || |||||||||| || ||| |||||||||||| | |||| ||| ||||||||| ||||||    
T  35412342 ttaaaagtctatttcatttgaacatctttaaataagtaatatgatctaagtttgagtagactagtgaactaataaatcaat 35412422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 272
Target Start/End: Complemental strand, 2823640 - 2823533
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    |||| ||||||||||  |||||||||| || ||  |||||| || |||||||| |||| ||||||| | || |||||||||  |||||| | ||||||||    
T  2823640 tagcatgtttaaaagtttatttcatatgaacattattaaataagtaatgtgatataaggttaaataaactaacgaactaatggatcaatgatattaaact 2823541  T
Q  265 ctcctttg 272  Q
    ||| ||||    
T  2823540 ctcttttg 2823533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 18731254 - 18731159
Alignment:
Q  169 ctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    ||||||||||| ||||||||||| || || | | ||| |  ||||  ||||||| ||||||||||||| ||||||||| |||||| | ||||||||    
T  18731254 ctgtttaaaagtctatttcatatgaacatttgttaataaataatgcaatctaagcttaaatagattagtgaactaatagatcaatgatattaaact 18731159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 246
Target Start/End: Original strand, 15680310 - 15680384
Alignment:
Q  172 tttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaata 246  Q
    |||||||| ||||||||||| || |||||||||| |  |||  ||| |||||||||||| |||| ||||||||||    
T  15680310 tttaaaagtctatttcatatgaacatctttaaataactaatacgatataagtttaaataaattaacgaactaata 15680384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 10622595 - 10622636
Alignment:
Q  108 tcatagacttactttttaggcctgagtctgaccttctgaaag 149  Q
    |||||| ||||||||||| || ||||||||||||||||||||    
T  10622595 tcataggcttactttttaagcttgagtctgaccttctgaaag 10622636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 1e-47; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 253
Target Start/End: Complemental strand, 25107666 - 25107434
Alignment:
Q  20 tgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttac 119  Q
    |||||||||| |||||| |||||||||||  ||||| ||| |||||| ||||||       |||||||||||||||  | | |  |||||||||||||||    
T  25107666 tgggaataggttaggccaagctaagctttacaaggcctgagcctggtatgccaaattttttgaaggcctaagcctgatcaaaggtctgtcatagacttac 25107567  T
Q  120 tttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatct 219  Q
    ||||| |||||||| ||| |||||||||||| ||||| || | ||||| |||||||||||||||||||| || || |||||||||| |||||||| ||||    
T  25107566 tttttgggcctgag-ctggccttctgaaagcctgatacgacctgttagtctgtttaaaagcctatttcaaatgaacatctttaaataagcaatgtaatct 25107468  T
Q  220 aagtttaaatagattagcgaactaatatatcaat 253  Q
    ||||||||||||  ||||||||||||||||||||    
T  25107467 aagtttaaataggctagcgaactaatatatcaat 25107434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 82 - 266
Target Start/End: Complemental strand, 1222548 - 1222364
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 181  Q
    ||||||| || ||||||| || |||||||||| |||||||| ||||| | || ||||||||||||||   ||||| | || | |||||||||||||| ||    
T  1222548 aaggcctgagtctggcctgcggcctgtcataggcttactttctaggcttaagcctgaccttctgaaaatctgatacggtctgctagcctgtttaaaaacc 1222449  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactct 266  Q
    |||||||||| || |||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  1222448 tatttcatatgaaaatctttaaataagcaatgtgatctaagtttaaatagactagcgaaccaatatatcaattagattaaactct 1222364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 117 - 272
Target Start/End: Original strand, 21019681 - 21019836
Alignment:
Q  117 tactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtga 216  Q
    |||||||||||||||||||| ||||||||||||  |||||||||| | |||| ||||||||||  ||| || ||| || |||||||||| ||||||||||    
T  21019681 tactttttaggcctgagtctaaccttctgaaagtctgatatgatctgctagcatgtttaaaagtttatatcttatgaacatctttaaataagcaatgtga 21019780  T
Q  217 tctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  21019781 tctaagtttaaatagactagcgaactaatagatcaattaaattaaactctcttttg 21019836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 20 - 266
Target Start/End: Complemental strand, 10710393 - 10710147
Alignment:
Q  20 tgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttac 119  Q
    ||||||||||||| |||||  || |||||| ||||||||| ||||| ||||||        ||||| |||||| |||||| | |||||||||||| ||||    
T  10710393 tgggaataggctatgccgatttaggctttgcaaggcatgagcctggcctgccatattttttgaaggtctaagcttggcctgcaacctgtcatagatttac 10710294  T
Q  120 tttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatct 219  Q
    |||||||||||||| || ||||| ||||||| |||||  | | |||||||||||||||| | ||||| |||| || || ||| ||| ||||||||| |||    
T  10710293 tttttaggcctgagccttaccttttgaaagcctgatacaacctgttagcctgtttaaaaacatattttatatgaacatattttaataagcaatgtgctct 10710194  T
Q  220 aagtttaaatagattagcgaactaatatatcaattaaattaaactct 266  Q
    | |||||| |||| |||| ||||||||||||||||||||||||||||    
T  10710193 atgtttaagtagactagcaaactaatatatcaattaaattaaactct 10710147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 81 - 272
Target Start/End: Original strand, 39139235 - 39139426
Alignment:
Q  81 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 180  Q
    ||||||||||||||||| | || |||||||||| ||||| ||||||| |||||| || |||||||||||  ||||| |||| | ||| ||||||| ||||    
T  39139235 gaaggcctaagcctggcatgcgccctgtcataggcttacgttttaggtctgagtttggccttctgaaagtctgatacgatctgctagtctgtttacaagc 39139334  T
Q  181 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    || ||| |||| || | |||||||| || |||||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||| ||||    
T  39139335 ctgttttatatgaacacctttaaataagtaatgtgatctaagtttaaatagaccagcgaactaatatatcaattagattaatctctcttttg 39139426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 14 - 272
Target Start/End: Original strand, 22738423 - 22738680
Alignment:
Q  14 tagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatag 113  Q
    ||||| |||||||| |||||||||||||| |||||| ||||| |||  ||||  ||||||       |||||| ||||| |||||| || ||||||||||    
T  22738423 taggggtgggaataagctaggccgagctaggctttgcaaggcctgagtctggcttgccaagttttttgaaggcataagcttggcctgcggcctgtcatag 22738522  T
Q  114 acttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatg 213  Q
     | || ||||||||||||||| || |||||| ||||  ||||| |  | | |||||||||||||||||||| | |||| || |||||||||| || |||     
T  22738523 gcatattttttaggcctgagtttggccttct-aaagtctgatacggccagctagcctgtttaaaagcctatattatatgaacatctttaaataaggaata 22738621  T
Q  214 tgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| ||||||||||| ||||    
T  22738622 tgatctaagtttaaatagactagtgaactaatatattaattagattaaactctcttttg 22738680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 165 - 266
Target Start/End: Original strand, 40691140 - 40691241
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  40691140 tagcctgtttaaaagcctatttcatatgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcaattagattaaact 40691239  T
Q  265 ct 266  Q
    ||    
T  40691240 ct 40691241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 101 - 267
Target Start/End: Complemental strand, 2062838 - 2062672
Alignment:
Q  101 cgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctt 200  Q
    |||||||| ||||||||||||||||| ||| ||||||  |||  |||||||| ||| || | |||||| ||||||||| | |||||||||| || |||||    
T  2062838 cgacctgttatagacttactttttagacctaagtctggtctttcgaaagcttaatacgacctgttagcatgtttaaaatcatatttcatatgaacatctt 2062739  T
Q  201 taaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    ||||| |||||||||||| ||||||||||||| ||||||  ||||| |||||||| |||||||||||    
T  2062738 taaataagcaatgtgatcgaagtttaaatagactagcgatttaatagatcaattagattaaactctc 2062672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 2621648 - 2621410
Alignment:
Q  22 ggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttactt 121  Q
    |||||||||||||||||| || | |||||||||| |||   ||| |||||||       ||||||| |||||||  || |||||| |||||| |||||||    
T  2621648 ggaataggctaggccgagttaggttttgtaaggcctgagtttggcctgccaatttttttgaaggccaaagcctgatctgcgacctatcataggcttactt 2621549  T
Q  122 tttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaa 221  Q
    |||||| ||||||||| |||||||||||   ||||   || | || | |||||||||| ||||||||||| || || ||||||| |||||| ||||||||    
T  2621548 tttagggctgagtctggccttctgaaagtcggatacagtctgctaacatgtttaaaaggctatttcatattaacatatttaaataagcaatatgatctaa 2621449  T
Q  222 gtttaaatagattagcgaactaatatatcaattaaatta 260  Q
    ||||||||||  || ||||||||||||||||||| ||||    
T  2621448 gtttaaatagtctaacgaactaatatatcaattagatta 2621410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 272
Target Start/End: Original strand, 2374176 - 2374363
Alignment:
Q  85 gcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctat 184  Q
    ||||||||||||| | |  |||||||||| | ||||||||||||||||| |||||||| ||||||||||||| || |   || | ||||||||||| |||    
T  2374176 gcctaagcctggcatgcagcctgtcataggcctactttttaggcctgagcctgaccttatgaaagcttgatacgaccttctaacttgtttaaaagcttat 2374275  T
Q  185 ttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
     || ||  || || ||||||| ||||||||||||||||||||||| || |||| ||||||||| ||||||| | ||||||||| ||||    
T  2374276 atcttacgaacatatttaaataagcaatgtgatctaagtttaaatggactagcaaactaatatttcaattagaataaactctcttttg 2374363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 272
Target Start/End: Original strand, 30469274 - 30469453
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 181  Q
    |||||||||||||| |||  | |||||||||| ||||| ||||||| ||||||| |||||||||||||| ||||||  | | | |||||||||||         
T  30469274 aaggcctaagcctgacctgtggcctgtcataggcttaccttttaggtctgagtcagaccttctgaaagcctgatat--tgcctgagcctgtttaa----- 30469366  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
        |||||| || |||||||||| ||||||||||||||||||| |||||| |||| ||||||||||||||||| ||||||||||| ||||    
T  30469367 ----tcatatgaacatctttaaataagcaatgtgatctaagtttgaatagactagcaaactaatatatcaattacattaaactctcttttg 30469453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 117 - 267
Target Start/End: Complemental strand, 19973152 - 19973003
Alignment:
Q  117 tactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtga 216  Q
    |||||||||||||||||||| ||||||||||||  |||||||||| | |||| ||||||||||  ||| || ||| || |||||||||| ||||||||||    
T  19973152 tactttttaggcctgagtctaaccttctgaaagtctgatatgatctgctagcatgtttaaaagtttatatcttatgaacatctttaaataagcaatgtga 19973053  T
Q  217 tctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    |||||| ||||||||| ||| || |||||| ||||| ||||| ||||||||    
T  19973052 tctaag-ttaaatagactagggagctaatagatcaaataaatgaaactctc 19973003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 272
Target Start/End: Original strand, 9617276 - 9617380
Alignment:
Q  168 cctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    |||||||||||| ||||||||||| || || ||||||| |||||||| |||||| || |||||||||| |||||||||||||||||||||||||||||||    
T  9617276 cctgtttaaaagtctatttcatatgaacatatttaaataagcaatgtaatctaaattcaaatagattaacgaactaatatatcaattaaattaaactctc 9617375  T
Q  268 ctttg 272  Q
     ||||    
T  9617376 ttttg 9617380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 165 - 272
Target Start/End: Complemental strand, 31588081 - 31587974
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    |||||| ||||||||| | |||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||| | ||||||||    
T  31588081 tagcctctttaaaagcttgtttcatatgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatattaataagattaaact 31587982  T
Q  265 ctcctttg 272  Q
    ||| ||||    
T  31587981 ctcttttg 31587974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 272
Target Start/End: Complemental strand, 3458083 - 3457928
Alignment:
Q  117 tactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtga 216  Q
    |||||||||| | ||||| ||  ||| ||||||| |||||||||  | |||| ||||||||||||||| || ||| || |||||||| | ||||||||||    
T  3458083 tactttttagccttgagtttggacttttgaaagcctgatatgatatgctagcatgtttaaaagcctatatcttatgaacatctttaagtaagcaatgtga 3457984  T
Q  217 tctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    | ||||||||||| |||||| |||||||||  ||||||| ||||||||||| ||||    
T  3457983 tttaagtttaaatggattagtgaactaatagttcaattagattaaactctcttttg 3457928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 272
Target Start/End: Original strand, 10811829 - 10811974
Alignment:
Q  127 gcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagttta 226  Q
    |||| ||||||  ||||||||||| ||||| | || | |||||||||||||||||||| || ||| || | |||||||| ||||||||||||||||||||    
T  10811829 gcctaagtctggtcttctgaaagcctgatacggtctgctagcctgtttaaaagcctatatcttatgaacaactttaaataagcaatgtgatctaagttta 10811928  T
Q  227 aatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    ||| || || |||||||||   ||||||| ||||||||||| ||||    
T  10811929 aatggactaacgaactaatggttcaattagattaaactctcttttg 10811974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 115 - 262
Target Start/End: Complemental strand, 17989107 - 17988962
Alignment:
Q  115 cttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgt 214  Q
    |||||||||||||||||||||||  ||||||||||  ||||    | |  |||||||||||||||||||||| | || || |||||||||| ||||||||    
T  17989107 cttactttttaggcctgagtctggtcttctgaaagtctgatggcctac--tagcctgtttaaaagcctattttacatgaacatctttaaataagcaatgt 17989010  T
Q  215 gatctaagtttaaatagattagcgaactaatatatcaattaaattaaa 262  Q
     || |||||||||||||| ||  |||||||||||||||||| ||||||    
T  17989009 aatttaagtttaaatagactaaggaactaatatatcaattagattaaa 17988962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 31955832 - 31955730
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    |||||||||||||||| ||| || ||| || || ||||||| ||||||| |||||||||||||||||| || |||||||||||||| |||| ||||||||    
T  31955832 tagcctgtttaaaagcatatatcgtattaacatttttaaataagcaatgcgatctaagtttaaatagactaacgaactaatatatcgattagattaaact 31955733  T
Q  265 ctc 267  Q
    |||    
T  31955732 ctc 31955730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 38996286 - 38996126
Alignment:
Q  104 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 203  Q
    |||||||||| ||||||||||||| |||| |||   |||||| |||  ||| |||| |   ||  |||||||||||| |||||| ||| || || |||||    
T  38996286 cctgtcataggcttactttttaggtctgattctagtcttctggaagtctgacatgacctactaatctgtttaaaagcatatttcgtattaacatttttaa 38996187  T
Q  204 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    || ||||||| ||| |||||||||||||| ||| |||||||||||||||||| ||||||||    
T  38996186 ataagcaatgcgatgtaagtttaaatagactagtgaactaatatatcaattagattaaact 38996126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 44602308 - 44602148
Alignment:
Q  104 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 203  Q
    |||||||||| ||||||||||||| |||| |||   |||||| |||  ||| |||| |   ||  |||||||||||| |||||| ||| || || |||||    
T  44602308 cctgtcataggcttactttttaggtctgattctagtcttctggaagtctgacatgacctactaatctgtttaaaagcatatttcgtattaacatttttaa 44602209  T
Q  204 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    || ||||||| ||| |||||||||||||| ||| |||||||||||||||||| ||||||||    
T  44602208 ataagcaatgcgatgtaagtttaaatagactagtgaactaatatatcaattagattaaact 44602148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 82 - 205
Target Start/End: Original strand, 2510377 - 2510500
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 181  Q
    ||||||| |||||||||| || |||||||||| ||||||||||||| |||||||||  |||||||| || ||||| || | | ||| |||||||||||||    
T  2510377 aaggcctgagcctggcctgcggcctgtcataggcttactttttaggtctgagtctggtcttctgaaggcctgatacgacctgctagtctgtttaaaagcc 2510476  T
Q  182 tatttcatataaatatctttaaat 205  Q
    ||||| |||| || || |||||||    
T  2510477 tattttatatgaacatttttaaat 2510500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 18020471 - 18020353
Alignment:
Q  18 gatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagactt 117  Q
    ||||||||||||||||||| ||||| ||||| |||||| | |  |||||||| |||       ||||| |||| |||||||| || ||||||||||||||    
T  18020471 gatgggaataggctaggccaagctaggctttttaaggcctaagtctggtctgtcaatttttttgaaggtctaaccctggcctgcggcctgtcatagactt 18020372  T
Q  118 actttttaggcctgagtct 136  Q
    |||||||||||||||||||    
T  18020371 actttttaggcctgagtct 18020353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 272
Target Start/End: Original strand, 17006299 - 17006405
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    |||||||||||||||| ||| |||||| || |||||||| | | |||| |||||||||||||||||||  ||| |||||||| ||||||| |||||||||    
T  17006299 tagcctgtttaaaagcatatatcatatgaacatctttaagtaaacaatatgatctaagtttaaatagaccagccaactaata-atcaatttaattaaact 17006397  T
Q  265 ctcctttg 272  Q
    ||| ||||    
T  17006398 ctcttttg 17006405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 272
Target Start/End: Complemental strand, 17570949 - 17570843
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    |||||||||||||||| ||| |||||| || |||||||| | | |||| |||||||||||||||||||  ||| |||||||| ||||||| |||||||||    
T  17570949 tagcctgtttaaaagcatatatcatatgaacatctttaagtaaacaatatgatctaagtttaaatagaccagccaactaata-atcaatttaattaaact 17570851  T
Q  265 ctcctttg 272  Q
    ||| ||||    
T  17570850 ctcttttg 17570843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 44652707 - 44652617
Alignment:
Q  115 cttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 205  Q
    ||||||||||||| ||||||||| |||||||||||| ||||| |  | | |||||||||||||||| |||||||||| || ||||||||||    
T  44652707 cttactttttaggtctgagtctggccttctgaaagcctgatacggcctgctagcctgtttaaaagcttatttcatatgaacatctttaaat 44652617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 261
Target Start/End: Original strand, 254746 - 254924
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 181  Q
    |||||||| | ||||||  || ||||| |||  ||||||||||||| ||||| |||||||| ||||||| |  ||   || | ||| ||||||||||| |    
T  254746 aaggcctatgtctggcccgcggcctgttataagcttactttttaggtctgagcctgacctt-tgaaagcctattacagtctgctagtctgtttaaaagtc 254844  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaa 261  Q
    ||| |||||| || |||||||||| | ||||||||| |||||||||| ||| ||||||||||| |  ||||||| |||||    
T  254845 tatatcatatgaacatctttaaataaacaatgtgatataagtttaaaaagactagcgaactaacaggtcaattagattaa 254924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 261
Target Start/End: Complemental strand, 661112 - 660934
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 181  Q
    |||||||| | ||||||  || ||||| |||  ||||||||||||| ||||| |||||||| ||||||| |  ||   || | ||| ||||||||||| |    
T  661112 aaggcctatgtctggcccgcggcctgttataagcttactttttaggtctgagcctgacctt-tgaaagcctattacagtctgctagtctgtttaaaagtc 661014  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaa 261  Q
    ||| |||||| || |||||||||| | ||||||||| |||||||||| ||| ||||||||||| |  ||||||| |||||    
T  661013 tatatcatatgaacatctttaaataaacaatgtgatataagtttaaaaagactagcgaactaacaggtcaattagattaa 660934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 267
Target Start/End: Original strand, 35458698 - 35458861
Alignment:
Q  104 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 203  Q
    |||||||||  ||||||||||||| |  |||||| |||| ||||||| ||||  |  | | ||| |||||||||||| |||||||||| ||  | |||||    
T  35458698 cctgtcataagcttactttttaggtccaagtctggccttatgaaagcctgattaggcctgctagtctgtttaaaagcatatttcatatgaacgtttttaa 35458797  T
Q  204 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    || || ||||||||| ||  ||||||||| |||||| |||||| |||||| | |||||||||||    
T  35458798 ataagtaatgtgatccaaagttaaatagactagcgagctaatagatcaatgatattaaactctc 35458861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 40691031 - 40691116
Alignment:
Q  14 tagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcct 99  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||  |||| |||||||       |||||||||||||||||||    
T  40691031 tagggatgggaataggctaggccgagctaggctttgcaaggcctgagtctggcctgccaatttttttgaaggcctaagcctggcct 40691116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 44652789 - 44652731
Alignment:
Q  15 agggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaa 73  Q
    |||||||||||||||||||||||||||| |||||| ||||| ||| ||||| |||||||    
T  44652789 agggatgggaataggctaggccgagctaggctttgcaaggcctgagcctggcctgccaa 44652731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 2510494 - 2510543
Alignment:
Q  223 tttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  2510494 tttaaatagactagcgaactaatatatcaattagattaaactctcttttg 2510543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 242
Target Start/End: Complemental strand, 846910 - 846751
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 181  Q
    |||||||| | ||||||  || ||||| |||  ||||||||||||| ||||| |||||||| ||||||| |  ||   || | ||| ||||||||||| |    
T  846910 aaggcctatgtctggcccgcggcctgttataagcttactttttaggtctgagcctgacctt-tgaaagcctattacagtctgctagtctgtttaaaagtc 846812  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaact 242  Q
    ||| |||||| || ||||||||||   ||||||||| |||||||||| ||| |||||||||    
T  846811 tatatcatatgaacatctttaaatacacaatgtgatataagtttaaaaagactagcgaact 846751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 17948929 - 17949044
Alignment:
Q  115 cttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgt 214  Q
    |||| |||||||| |||||||||||||||| ||||  || || || | | ||||||||| ||||| |||| |||||| || || ||||||| | |||| |    
T  17948929 cttaatttttaggtctgagtctgaccttctaaaagtctgttacgacctgctagcctgttgaaaagtctatatcatatgaacatttttaaataaacaatat 17949028  T
Q  215 gatctaagtttaaata 230  Q
     || ||||||||||||    
T  17949029 aatataagtttaaata 17949044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 9552501 - 9552563
Alignment:
Q  184 tttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaata 246  Q
    |||||||| || || ||||||| | |||||||||||||||||||||| | || ||||||||||    
T  9552501 tttcatatgaacatatttaaataaacaatgtgatctaagtttaaataaactaacgaactaata 9552563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 39629220 - 39629158
Alignment:
Q  88 taagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagc 150  Q
    |||||||||||| || |||| | ||| ||||||||||||| || |||||| ||||||||||||    
T  39629220 taagcctggcctgcggcctgacgtaggcttactttttaggtctaagtctggccttctgaaagc 39629158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 39638770 - 39638708
Alignment:
Q  88 taagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagc 150  Q
    |||||||||||| || |||| | ||| ||||||||||||| || |||||| ||||||||||||    
T  39638770 taagcctggcctgcggcctgacgtaggcttactttttaggtctaagtctggccttctgaaagc 39638708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 40554473 - 40554397
Alignment:
Q  170 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaata 246  Q
    |||||||||| |||| | | || || |||||||||  || ||||||||||||||||||||||| || |||| |||||    
T  40554473 tgtttaaaagtctatcttaaatgaacatctttaaaaaagtaatgtgatctaagtttaaatagactaacgaattaata 40554397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 4e-47; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 81 - 264
Target Start/End: Complemental strand, 43464725 - 43464542
Alignment:
Q  81 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 180  Q
    |||||||||| |||||| | ||||||||||||| |||||||||||||| |||| |||||||||||||||  || || || | | ||||| ||||||||||    
T  43464725 gaaggcctaaacctggcatgcgacctgtcataggcttactttttaggcttgagcctgaccttctgaaagtctggtacgacctgctagcccgtttaaaagc 43464626  T
Q  181 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    || ||||||||  | |||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  43464625 ctgtttcatatggacatctttaaataagcaatgtgatctaagtttaaatagactagcgaattaatatatcaattagattaaact 43464542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 267
Target Start/End: Original strand, 9503642 - 9503900
Alignment:
Q  9 gcaattagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgt 108  Q
    |||||||||||| |||||||| ||||||||| || |||||| ||||| | | ||||| ||||||         || ||||||| ||| |||    |||||    
T  9503642 gcaattagggataggaataggttaggccgagttaggctttgcaaggcctaagcctggcctgccatattttttaaaagcctaagtctgacctgttgcctgt 9503741  T
Q  109 catagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcag 208  Q
    ||||||| ||||||| |||| ||||||||||||| ||||||  |||||||| | | |||||||||||||||||||| || ||| || |||||||||| ||    
T  9503742 catagacctacttttaaggcttgagtctgaccttttgaaagtctgatatgacctgctagcctgtttaaaagcctatatcttatgaacatctttaaataag 9503841  T
Q  209 caatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    ||||||||||||||||||||| || |||||||||||||  ||||||| |||||||||||    
T  9503842 caatgtgatctaagtttaaatggactagcgaactaataattcaattagattaaactctc 9503900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 272
Target Start/End: Original strand, 29697374 - 29697565
Alignment:
Q  81 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 180  Q
    ||||| ||||| |||||||||| ||| |||||||||||||||||| || ||||||||||||| ||||||  ||||| | || |  ||| ||||||||  |    
T  29697374 gaaggtctaagtctggcctacggcctatcatagacttactttttatgcttgagtctgaccttttgaaagtctgatacggtctgcaagcatgtttaaagac 29697473  T
Q  181 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    ||||||||||| || |||||||||| ||||||| |||||||||||||||||| || ||||||||||||| ||||| ||||||||||| ||||    
T  29697474 ctatttcatatgaacatctttaaataagcaatgcgatctaagtttaaatagactaacgaactaatatattaattagattaaactctcttttg 29697565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 12 - 267
Target Start/End: Original strand, 22990328 - 22990583
Alignment:
Q  12 attagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcat 111  Q
    ||||||| |||||||||| ||||| ||| || |||||| ||||| ||||||| | |||||||       |||||||||||||||| ||| | ||||||||    
T  22990328 attaggggtgggaataggataggctgagttaggctttgcaaggcttgaacctagcctgccaaatttttcgaaggcctaagcctggtctatggcctgtcat 22990427  T
Q  112 agacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaa 211  Q
    || |||||||||| |||||||||||| |||||| ||||  ||||| |    |||||| ||||||||||||||||| | |  || |||||| ||| |||||    
T  22990428 aggcttacttttttggcctgagtctgcccttctaaaagtctgatacggcatgttagcttgtttaaaagcctattttacacgaacatcttttaataagcaa 22990527  T
Q  212 tgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    |||||| |||||||||||||| || | || |||||||||||||| |||||||||||    
T  22990528 tgtgatataagtttaaatagactaacaaattaatatatcaattagattaaactctc 22990583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 95 - 272
Target Start/End: Complemental strand, 29563845 - 29563674
Alignment:
Q  95 ggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaa 194  Q
    |||||||  |||||||||||||||||||||||||||||||||| |||||||  ||| ||||| ||   ||||||||||||||||| || |||||||| ||    
T  29563845 ggcctacagcctgtcatagacttactttttaggcctgagtctggccttctggtagcctgatacgacatgttagcctgtttaaaagtctgtttcatatgaa 29563746  T
Q  195 tatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
     |||||||||| ||||||||||||      |||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  29563745 catctttaaataagcaatgtgatc------taaatagactagcgaactaatatatcaattagattaaactctcttttg 29563674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 12 - 267
Target Start/End: Complemental strand, 11837197 - 11836942
Alignment:
Q  12 attagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcat 111  Q
    |||| ||||| ||||||| |||||||||||| |||||| ||||  | | ||||| ||| |||        ||||| |||||||||||| | |||||||||    
T  11837197 attaaggatgagaataggttaggccgagctaggctttgcaaggtctaagcctggcctgtcaaatttttgtaaggcttaagcctggcctgcaacctgtcat 11837098  T
Q  112 agacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaa 211  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||  |  |   |||| ||||||||||| | |||||||| || | |||||||| || ||    
T  11837097 agacttacattttaggcctgagtctgaccttatgaaagcctgattaggcctactagcttgtttaaaagcatgtttcatatcaacacctttaaataagtaa 11836998  T
Q  212 tgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    ||||||| ||| ||||||||| |||||| ||||||||||||| | |||||||||||    
T  11836997 tgtgatcaaaggttaaatagactagcgagctaatatatcaatgatattaaactctc 11836942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 265
Target Start/End: Original strand, 20601402 - 20601665
Alignment:
Q  14 tagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatag 113  Q
    ||||| ||||| ||||||||||||||||| |||||| ||||| ||| ||||| |||||||       ||||||||||||||||||| ||  |||||||||    
T  20601402 taggggtgggagtaggctaggccgagctaggctttgcaaggcctgagcctggcctgccaaattttttgaaggcctaagcctggcctgcggtctgtcatag 20601501  T
Q  114 acttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaat- 212  Q
    |||||||||||||| ||||||||  |||||||||||| || || |  | | |||||| |||||| ||||||||||||| || |||||||||| ||||||     
T  20601502 acttactttttaggtctgagtcttgccttctgaaagcctgctaaggcctgctagcctatttaaatgcctatttcatatgaacatctttaaataagcaatt 20601601  T
Q  213 -----------gtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 265  Q
               | | | |||||||||||||| || ||||||||||||||||||| |||||||||    
T  20601602 aaataagtaatgcgttataagtttaaatagactaacgaactaatatatcaattagattaaactc 20601665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 104 - 266
Target Start/End: Original strand, 36159084 - 36159246
Alignment:
Q  104 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 203  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||  ||||  |  | |||||| ||||||||||||||||| |||| || || |||||    
T  36159084 cctgtcatagacttattttttaggcctgagtctgaccttatgaaagtctgattaggcctgttagcatgtttaaaagcctattttatatgaacatatttaa 36159183  T
Q  204 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactct 266  Q
    || || ||| ||||| ||| ||||||||  |||||| ||||||||||||||| ||||||||||    
T  36159184 ataagtaatatgatccaagattaaatagcctagcgagctaatatatcaattatattaaactct 36159246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 14 - 272
Target Start/End: Complemental strand, 21524089 - 21523842
Alignment:
Q  14 tagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatag 113  Q
    |||||||||||||||| ||||| ||| || |||||| ||||  ||| ||||| || | ||       ||||||||||||||||||| ||   | ||||||    
T  21524089 tagggatgggaataggataggctgagttaggctttgcaaggtctgagcctggcctacaaatttttttgaaggcctaagcctggcctgcggtatatcatag 21523990  T
Q  114 acttacttttt-aggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaat 212  Q
     |||||||||| ||||||||||||| |||||||||||| ||||| |        ||||| |    ||||| |||||||| || |||||||||| ||||||    
T  21523989 gcttacttttttaggcctgagtctggccttctgaaagcctgatacg--------gcctgct----agcctgtttcatatgaacatctttaaataagcaat 21523902  T
Q  213 gtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||    
T  21523901 gtgatctaagtttaaatagactagcgaactaatatatcaattagattaatctctcttttg 21523842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 106 - 267
Target Start/End: Original strand, 31132901 - 31133055
Alignment:
Q  106 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 205  Q
    ||||||||||||||||||||||||||||| || |||||||||| | |||||        || ||||||||||||| |||||||||| || ||||||||||    
T  31132901 tgtcatagacttactttttaggcctgagtttggccttctgaaatcatgatac-------taacctgtttaaaagcttatttcatatgaacatctttaaat 31132993  T
Q  206 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
     || ||||||||||||||||||||| | || | |||||||| |||||| | |||||||||||    
T  31132994 aagtaatgtgatctaagtttaaatatactatcaaactaatagatcaatgagattaaactctc 31133055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 82 - 267
Target Start/End: Original strand, 44890550 - 44890735
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 181  Q
    |||||||||| |||| ||||| | |||||||  ||||||||||||||||||||||| |||  ||||||||||||  |    | ||||||||||||||| |    
T  44890550 aaggcctaagtctggtctacggcatgtcataagcttactttttaggcctgagtctggcctaatgaaagcttgattaggcttgctagcctgtttaaaagtc 44890649  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    ||||| |||| || |||||||||| || ||||||||  ||| ||||||||| ||||||  ||||| |||||| | |||||||||||    
T  44890650 tatttaatatgaacatctttaaataagtaatgtgattcaaggttaaatagactagcgagataatagatcaatgatattaaactctc 44890735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 105 - 272
Target Start/End: Complemental strand, 51880457 - 51880286
Alignment:
Q  105 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatt----tcatataaatatctt 200  Q
    ||||||||| | |||||||||||||||||||||  ||| ||||||| |||||||  | | ||||||||||||||||||  |    || ||| ||||||||    
T  51880457 ctgtcataggcctactttttaggcctgagtctggtcttatgaaagcctgatatggcctgctagcctgtttaaaagcctgatatggtcttatgaatatctt 51880358  T
Q  201 taaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    ||| | ||||||||||||||||||||||| || |||| |||||||   ||||||| ||||||||||| ||||    
T  51880357 taagtaagcaatgtgatctaagtttaaatggactagcaaactaattgttcaattagattaaactctcttttg 51880286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 267
Target Start/End: Original strand, 52426213 - 52426376
Alignment:
Q  104 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 203  Q
    |||||||||| ||||||||||||| ||||||||| |||| ||||||  ||||  |  |   ||||||||||||||||||||||||||| |||||||||||    
T  52426213 cctgtcataggcttactttttaggtctgagtctggccttatgaaagtctgattaggcctactagcctgtttaaaagcctatttcatatgaatatctttaa 52426312  T
Q  204 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    || || | ||| ||| ||  ||||||||| |||| | || ||| |||||| | |||||||||||    
T  52426313 ataagtagtgtaatccaatgttaaatagactagctagctgatagatcaatgatattaaactctc 52426376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 272
Target Start/End: Complemental strand, 45613327 - 45613225
Alignment:
Q  170 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcct 269  Q
    |||||||||| |||||| |||| ||||||||||||| | ||||||| ||| ||||||| |||| || ||||||||| ||||||||| ||||||||||| |    
T  45613327 tgtttaaaagtctattttatatgaatatctttaaataaacaatgtggtcttagtttaactagactaacgaactaatgtatcaattagattaaactctctt 45613228  T
Q  270 ttg 272  Q
    |||    
T  45613227 ttg 45613225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 253
Target Start/End: Complemental strand, 27483555 - 27483384
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 181  Q
    |||||||||||||| | ||| |||| |||||  ||||||||||||| |||||| ||||||| | ||||  ||||  || |   ||  ||||||||||| |    
T  27483555 aaggcctaagcctgacttacaacctatcataatcttactttttaggtctgagtatgaccttataaaagtctgattagacctactaatctgtttaaaagtc 27483456  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaat 253  Q
    |||||||||| || || ||||||| || |||||||| |||| ||||||||| ||| || |||||| ||||||    
T  27483455 tatttcatatgaacatatttaaataagtaatgtgatttaagattaaatagactagtgagctaatagatcaat 27483384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 107 - 191
Target Start/End: Original strand, 980845 - 980929
Alignment:
Q  107 gtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatat 191  Q
    ||||||| ||||||||||||||||||||| || |||||||||||  |||  |||| |||||||| ||||||| | ||||||||||    
T  980845 gtcataggcttactttttaggcctgagtccgatcttctgaaagcccgattcgatctgttagcctatttaaaaacttatttcatat 980929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 265
Target Start/End: Complemental strand, 43946869 - 43946710
Alignment:
Q  108 tcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatca 207  Q
    ||||||||| | ||||| | | ||| ||||| |||||||||| ||||| ||||| |||| | |||| |||||  ||||||||||  |||||||||||| |    
T  43946869 tcatagactaattttttggacatgaatctgatcttctgaaagtttgatgtgatctgttaacttgttgaaaagtttatttcatatgtatatctttaaataa 43946770  T
Q  208 gcaa--tgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 265  Q
    | ||  |||||| |||||||||||||| |  | |||||||| |||||| | |||||||||    
T  43946769 gtaatgtgtgatttaagtttaaatagactgacaaactaataaatcaataacattaaactc 43946710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 264
Target Start/End: Original strand, 27048541 - 27048640
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    |||||||||||||||||||| ||||||  | |||||||||| |  ||||| || |||||||||||||| || |||| ||||| |||||| | ||||||||    
T  27048541 tagcctgtttaaaagcctatatcatatggacatctttaaataactaatgtaatataagtttaaatagactaccgaattaatagatcaataagattaaact 27048640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 33458755 - 33458660
Alignment:
Q  169 ctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    ||||||||||| | ||||||||  || || ||||||  || |||||||| |||||||||| ||| ||| |||||||||||||||  ||||||||||    
T  33458755 ctgtttaaaagtccatttcatacgaacatttttaaagaagtaatgtgatttaagtttaaagagactagtgaactaatatatcaacgaaattaaact 33458660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 30643270 - 30643188
Alignment:
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    ||||| |||||||||||||||| | |  | |||||||||| ||||||||||  || ||||||||| |||||| | ||||||||    
T  30643270 tattttatataaatatctttaattaattagtgtgatctaaatttaaatagacaagtgaactaataaatcaatgagattaaact 30643188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 125
Target Start/End: Complemental strand, 22771189 - 22771160
Alignment:
Q  96 gcctacgacctgtcatagacttacttttta 125  Q
    ||||||||||||||||||||||||||||||    
T  22771189 gcctacgacctgtcatagacttacttttta 22771160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 29563915 - 29563874
Alignment:
Q  14 tagggatgggaataggctaggccgagctaagctttgtaaggc 55  Q
    ||||| ||||||||||||||||||||||| |||||| |||||    
T  29563915 taggggtgggaataggctaggccgagctaggctttgcaaggc 29563874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 29719350 - 29719391
Alignment:
Q  214 tgatctaagtttaaatagattagcgaactaatatatcaatta 255  Q
    ||||||||||||  ||||| ||||||||||||||||||||||    
T  29719350 tgatctaagtttgcatagactagcgaactaatatatcaatta 29719391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 272
Target Start/End: Complemental strand, 9716566 - 9716306
Alignment:
Q  11 aattagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtca 110  Q
    |||||||||||||||||||||||||||||||| |||||| ||| | | |   ||| ||||||         ||| |||||| ||||||| |  ||| |||    
T  9716566 aattagggatgggaataggctaggccgagctaggctttgcaagacctaagtttggcctgccatattttttaaag-cctaagtctggcctgcagcctatca 9716468  T
Q  111 tagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagca 210  Q
    ||| | |||||||||||||||||| ||||||||||||||  ||||| |  | | |||||||||||||||||||| || ||| ||||||||||||| ||||    
T  9716467 taggcctactttttaggcctgagtttgaccttctgaaagtctgatacggcctgctagcctgtttaaaagcctatatcttatgaatatctttaaataagca 9716368  T
Q  211 atgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||||||||||||||| || || |||||||||||||  ||||||| ||||||||||| ||||    
T  9716367 atgtgatctaagtttacattgactagcgaactaatagttcaattagattaaactctcttttg 9716306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 116 - 272
Target Start/End: Original strand, 16054892 - 16055048
Alignment:
Q  116 ttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtg 215  Q
    |||||||||||| ||||| | |||||||||||||| ||||| ||   | || | |||||||||||||||||||||| || |||||| ||| | ||||||     
T  16054892 ttactttttaggtctgagcccgaccttctgaaagcatgatacgacatgctaacatgtttaaaagcctatttcatatgaacatctttgaataaacaatgta 16054991  T
Q  216 atctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  16054992 atctaagtttaaatagactagcgaactaatatatcaattagattaaactctcttttg 16055048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 106 - 272
Target Start/End: Original strand, 43897988 - 43898153
Alignment:
Q  106 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 205  Q
    |||||||  |||||||||||||| |||||||| | |||||||||||||||| || | | ||   ||||||||||| ||||||||||||  ||||||||||    
T  43897988 tgtcatatgcttactttttaggcatgagtctggcattctgaaagcttgataagacctgctattttgtttaaaagcttatttcatataac-atctttaaat 43898086  T
Q  206 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
     | |||||||||||||||||||||||  |||| ||||||||||||||||| ||||||||||| ||||    
T  43898087 aaacaatgtgatctaagtttaaatagtctagcaaactaatatatcaattagattaaactctcttttg 43898153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 272
Target Start/End: Original strand, 5880133 - 5880316
Alignment:
Q  88 taagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttc 187  Q
    |||||||||| | || |||||||||| | ||| |||||||| |||||||| |||||||||||||||||||   | | ||| |||||||||||| ||| ||    
T  5880133 taagcctggcatgcggcctgtcataggcctacattttaggcttgagtctggccttctgaaagcttgatatagcctgctagactgtttaaaagcttatatc 5880232  T
Q  188 atataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
     ||| || |||||||||| ||||||||||||||||||||||| || |||||||||||||   |||||| ||||||||||| ||||    
T  5880233 ttatgaacatctttaaataagcaatgtgatctaagtttaaatggactagcgaactaata-gccaattagattaaactctcttttg 5880316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 82 - 267
Target Start/End: Complemental strand, 39848726 - 39848541
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 181  Q
    ||||||||||||||| || |  ||| |||||| ||||| |||||||| ||||| || |||| ||||||| ||||  |  | | ||| || ||||||||||    
T  39848726 aaggcctaagcctggtctgcagcctatcataggcttacattttaggcttgagtatggccttatgaaagcctgattaggccagctagactatttaaaagcc 39848627  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    |||||||||| || |||||||||| || ||||||||  ||||||||||||| ||||||||||||| |||| | | |||||||||||    
T  39848626 tatttcatatgaacatctttaaataagtaatgtgattcaagtttaaatagactagcgaactaatagatcagtgatattaaactctc 39848541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 248
Target Start/End: Complemental strand, 16202376 - 16202142
Alignment:
Q  14 tagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatag 113  Q
    ||||||||||||||||||| ||||||||| |||||| ||||| | |  |||| ||| |||        |||||||||||||||| | || ||| ||||||    
T  16202376 tagggatgggaataggctaagccgagctaggctttgcaaggcctaagtctggcctgtcaaacttttgtaaggcctaagcctggcttgcggcctatcatag 16202277  T
Q  114 acttactttttaggcctgagtctgaccttctgaaagcttgat-atgatccgt-tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaa 211  Q
     ||||||||||| || |||| |||||||| ||||||| |||| |||  || | ||||||||||||||||||| ||||||| || |||||||||| || ||    
T  16202276 gcttactttttaagcttgaggctgaccttatgaaagcctgattatg--ccttctagcctgtttaaaagcctacttcatatgaacatctttaaataagtaa 16202179  T
Q  212 tgtgatctaagtttaaatagattagcgaactaatata 248  Q
    ||||||  ||| ||||||||| | |||| ||||||||    
T  16202178 tgtgattcaaggttaaatagacttgcgagctaatata 16202142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 272
Target Start/End: Complemental strand, 4816833 - 4816726
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    |||||||||||||||||||| || ||| || || ||||||| ||||||||| ||||||||||||| ||  ||||||||||||  ||||||||||||||||    
T  4816833 tagcctgtttaaaagcctatatcttatgaacatatttaaataagcaatgtggtctaagtttaaatggaccagcgaactaatagttcaattaaattaaact 4816734  T
Q  265 ctcctttg 272  Q
    ||| ||||    
T  4816733 ctcttttg 4816726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 9730100 - 9730219
Alignment:
Q  152 tgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatca 251  Q
    |||||||||| | |||| |||||||||||  ||| ||||| || |||||||||| ||||||||| | ||| |||| ||||| ||||||||||||| ||||    
T  9730100 tgatatgatctgctagcatgtttaaaagctgatt-catatgaacatctttaaataagcaatgtggtataaatttagatagactagcgaactaatagatca 9730198  T
Q  252 attaaattaaactctcctttg 272  Q
    |||||||||||||||| ||||    
T  9730199 attaaattaaactctcttttg 9730219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 267
Target Start/End: Original strand, 32700587 - 32700689
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    ||||||||||||| | ||||||||||| || |||||||||| || ||||||||  ||| ||||||||| ||||||||||||| |||||| | ||||||||    
T  32700587 tagcctgtttaaatgtctatttcatatgaacatctttaaataagtaatgtgattcaaggttaaatagactagcgaactaataaatcaatgatattaaact 32700686  T
Q  265 ctc 267  Q
    |||    
T  32700687 ctc 32700689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 38556647 - 38556514
Alignment:
Q  139 ccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcg 238  Q
    |||||||||||| | |||||| | | ||| |||||||||||||||| || |||||| || ||||||| ||||||||||| ||||||||||| || | |||    
T  38556647 ccttctgaaagcctaatatgacctgctagtctgtttaaaagcctatatcttataaacatatttaaataagcaatgtgatataagtttaaatggactggcg 38556548  T
Q  239 aactaatatatcaattaaattaaactctcctttg 272  Q
    |||||| |  ||||| | ||||||||||| ||||    
T  38556547 aactaaaagttcaatcagattaaactctcttttg 38556514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 272
Target Start/End: Original strand, 5442919 - 5443026
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    |||| |||||||||| |||| | ||||  | || ||||||| ||||||| |||||||||||||||||| || |||||||||| |||||||| ||||||||    
T  5442919 tagcatgtttaaaagtctatattatatgcacatatttaaataagcaatgcgatctaagtttaaatagactaacgaactaatagatcaattagattaaact 5443018  T
Q  265 ctcctttg 272  Q
    ||| ||||    
T  5443019 ctcttttg 5443026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 16735032 - 16735130
Alignment:
Q  169 ctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    ||||||||||| |||| || ||| || |||||||||| || |||||||| ||||||||||| || |||||||||||||  ||||||||| |||||||||    
T  16735032 ctgtttaaaagtctatatcttatgaacatctttaaataagtaatgtgatgtaagtttaaatggactagcgaactaatagttcaattaaactaaactctc 16735130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 272
Target Start/End: Original strand, 1845216 - 1845320
Alignment:
Q  168 cctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 267  Q
    |||||||||||| |||| || ||| || |||||||||| |||| | |||||||| ||||||| || |||||||||||||  | ||||| |||||||||||    
T  1845216 cctgtttaaaagtctatatcttatgaacatctttaaataagcattatgatctaattttaaatggactagcgaactaatagtttaattagattaaactctc 1845315  T
Q  268 ctttg 272  Q
     ||||    
T  1845316 ttttg 1845320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 272
Target Start/End: Complemental strand, 5712674 - 5712574
Alignment:
Q  172 tttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctccttt 271  Q
    |||||||| ||||||||||| || || ||||||| || ||||||||||||| ||||||||| |||| |  ||||| |||||| | ||||||||||| |||    
T  5712674 tttaaaagtctatttcatatgaacatatttaaataagtaatgtgatctaaggttaaatagactagcaagttaatagatcaatgatattaaactctctttt 5712575  T
Q  272 g 272  Q
    |    
T  5712574 g 5712574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 253
Target Start/End: Original strand, 7598853 - 7598999
Alignment:
Q  108 tcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatcc-gttagcctgtttaaaagcctatttcatataaatatctttaaatc 206  Q
    ||||||||||| |||||||||||||||| | ||| |||||||  || | || ||| | |||  ||||||||||| ||||| |||| || || |||||||     
T  7598853 tcatagacttattttttaggcctgagtcaggcctcctgaaagtctgttgtggtcctggtagtgtgtttaaaagcatattttatatgaacatatttaaata 7598952  T
Q  207 agcaatgtgatctaagtttaaatagattagcgaactaatatatcaat 253  Q
    || || ||||||| | ||| |||||| || |||||||||||||||||    
T  7598953 agtaacgtgatctgaatttgaatagactatcgaactaatatatcaat 7598999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 10057215 - 10057297
Alignment:
Q  180 cctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaa 262  Q
    ||||| |||||| ||  ||||||||| | ||||||||| |||||||||||||| ||||||| ||||| |||||||| ||||||    
T  10057215 cctatatcatatgaacttctttaaataaacaatgtgatataagtttaaatagactagcgaattaatagatcaattagattaaa 10057297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 29037674 - 29037735
Alignment:
Q  170 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatag 231  Q
    ||||||||||| ||||||||||||| |||||||||| || |||| | |||||||||||||||    
T  29037674 tgtttaaaagcttatttcatataaacatctttaaataagtaatgcggtctaagtttaaatag 29037735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 12677928 - 12677840
Alignment:
Q  164 ttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaa 252  Q
    |||| |||||||||| | |||||||||| ||||||||||||| ||||| | | ||||| |||||||| | ||| | |||||||||||||    
T  12677928 ttagtctgtttaaaaacttatttcatatgaatatctttaaataagcaacgcgttctaaatttaaataaactagtggactaatatatcaa 12677840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 37259407 - 37259358
Alignment:
Q  196 atctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaat 245  Q
    ||||||||||||| |||||||||||||||||||||||  | |||||||||    
T  37259407 atctttaaatcagtaatgtgatctaagtttaaatagacaaacgaactaat 37259358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 5712743 - 5712699
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttag 126  Q
    |||||||||| |||||||||| ||||||||| |||||||||||||    
T  5712743 aaggcctaagtctggcctacggcctgtcatacacttactttttag 5712699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 2764308 - 2764246
Alignment:
Q  168 cctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaata 230  Q
    ||||||||||||||||||| ||||||| || ||||||| |  |||||  ||||||||||||||    
T  2764308 cctgtttaaaagcctatttaatataaaaatatttaaattaataatgttttctaagtttaaata 2764246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 39848794 - 39848753
Alignment:
Q  14 tagggatgggaataggctaggccgagctaagctttgtaaggc 55  Q
    ||||||||||||||||||||||||||| | |||||| |||||    
T  39848794 tagggatgggaataggctaggccgagcaaggctttgcaaggc 39848753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 9e-39; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 24 - 246
Target Start/End: Complemental strand, 5331491 - 5331269
Alignment:
Q  24 aataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttactttt 123  Q
    |||||||||||||||| ||  ||||| ||||| | | |||||||||||||        || |||||| |||||||| || |||||||||||| |||||||    
T  5331491 aataggctaggccgagatagactttgcaaggcctaagcctggtctgccaaatttttttaaagcctaaacctggcctgcggcctgtcatagacctactttt 5331392  T
Q  124 taggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagt 223  Q
     ||||||||||||| |||||||||||||||||| |  | | || ||||||||||| ||||| || ||| ||||||||||||| |||||||||| ||||||    
T  5331391 aaggcctgagtctggccttctgaaagcttgatacggcctgctaacctgtttaaaaacctatatcttatgaatatctttaaataagcaatgtgacctaagt 5331292  T
Q  224 ttaaatagattagcgaactaata 246  Q
    |||||| || || ||||||||||    
T  5331291 ttaaatggactaacgaactaata 5331269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 272
Target Start/End: Original strand, 33247883 - 33248141
Alignment:
Q  14 tagggatgggaataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatag 113  Q
    |||||||| |||||||||||||| ||| | |||| ||||||| ||| | ||  |||||||       ||||| ||||| ||||| |  | ||||||||||    
T  33247883 tagggatgagaataggctaggccaagcaaggcttcgtaaggcctgagcttgacctgccaatttttttgaaggtctaagtctggcatgtggcctgtcatag 33247982  T
Q  114 acttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatg 213  Q
    ||||||||||||| ||||||| ||   |||||||||  ||||| ||   |||| ||||||||||||||||||||||||||| || ||| |||  ||||||    
T  33247983 acttactttttagacctgagtttggatttctgaaagtctgatacgacatgttatcctgtttaaaagcctatttcatataaacatatttcaatttgcaatg 33248082  T
Q  214 tgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    | |||||||| |||||||| || | |||||| |||||||||||||||||||||| ||||    
T  33248083 ttatctaagtgtaaatagactaacaaactaagatatcaattaaattaaactctcttttg 33248141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 272
Target Start/End: Complemental strand, 24073784 - 24073594
Alignment:
Q  81 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 180  Q
    |||||||||||||||||||||| |||||||| | || || ||||||||||||||||| ||||| |||| | ||||| || | | |||||||| |||||||    
T  24073784 gaaggcctaagcctggcctacggcctgtcattggctcaccttttaggcctgagtctggccttcggaaaacctgatacgacctgctagcctgtctaaaagc 24073685  T
Q  181 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    | ||||||||| || |||||| ||| |||||||||||||  | ||||||||| |||| ||| ||||||||||||| |||||| |||| ||||    
T  24073684 ccatttcatatgaacatcttttaataagcaatgtgatct-gggttaaatagactagcaaaccaatatatcaattagattaaattctcttttg 24073594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 93 - 272
Target Start/End: Complemental strand, 24556834 - 24556654
Alignment:
Q  93 ctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatata 192  Q
    ||||||| || |||||||||||| ||||||||| || | || ||||||||||| |||| ||||| |  | | |||||||||||||||  ||| || |||     
T  24556834 ctggcctgcggcctgtcatagacctactttttaagctttagcctgaccttctgtaagcctgatacggcctgctagcctgtttaaaaggatatatcttatg 24556735  T
Q  193 aatatctttaaatcagcaatgtgatctaa-gtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    || |||||||||| ||||||||||||||| ||||||||||| |||||||||||||  ||||||| ||||||||||| ||||    
T  24556734 aacatctttaaataagcaatgtgatctaaagtttaaatagactagcgaactaatagttcaattagattaaactctcttttg 24556654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 272
Target Start/End: Original strand, 10667453 - 10667644
Alignment:
Q  81 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 180  Q
    ||||||||||| ||||| | ||  || |||||  |||| ||||||||  |||||||| |||||||||||| || || |  | | ||| ||||||||||||    
T  10667453 gaaggcctaagtctggcttgcggtctatcatatgcttaatttttaggtatgagtctggccttctgaaagcctgctacggcctgctagtctgtttaaaagc 10667552  T
Q  181 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    ||||||||||| || ||||||  || || ||||||||||||||||||||||| |||| |||| ||| |||||||| | ||||||||| ||||    
T  10667553 ctatttcatatgaacatctttgtataagtaatgtgatctaagtttaaatagactagcaaactcatagatcaattagaataaactctcttttg 10667644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 132 - 272
Target Start/End: Complemental strand, 9952929 - 9952789
Alignment:
Q  132 agtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatag 231  Q
    |||||| |||||||||||||||||| | || | ||||||||||||||| |||| |  ||| || |||||||||| | |||||||||||| |||||||| |    
T  9952929 agtctggccttctgaaagcttgatacggtctgctagcctgtttaaaagtctatatattatgaacatctttaaataaacaatgtgatctacgtttaaatgg 9952830  T
Q  232 attagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    | || ||||||||||  ||||||| ||||||||||| ||||    
T  9952829 actaccgaactaatagttcaattagattaaactctcttttg 9952789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 26244432 - 26244338
Alignment:
Q  170 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    ||||||||||| ||| |||| | ||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||    
T  26244432 tgtttaaaagcatatatcatgtgaatatatttaaataagcaatgtgatctaagtttcaatagattagtgaactaataaatcaattagattaaact 26244338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 272
Target Start/End: Original strand, 33614459 - 33614611
Alignment:
Q  120 tttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatct 219  Q
    ||||||||| ||| |||||| |||||||||  |||||| |  |||||| || ||||||| ||||||||||||||| || |||||||    ||||| || |    
T  33614459 tttttaggcttgattctgactttctgaaagtctgatataacacgttagtctatttaaaaacctatttcatataaacatatttaaatatataatgtaatat 33614558  T
Q  220 aagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 272  Q
    |||||||||||||| | ||||||||||||||||| | ||| ||||||| ||||    
T  33614559 aagtttaaatagatcaacgaactaatatatcaatgagattgaactctcttttg 33614611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 230
Target Start/End: Complemental strand, 8351421 - 8351296
Alignment:
Q  105 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 204  Q
    ||||||||||||||||||||||| |||| || || ||||| ||||||||||||||   | |||| ||||||||||| |||||||||| ||   |||||||    
T  8351421 ctgtcatagacttactttttaggtctgaatccgatcttctaaaagcttgatatgacgtgctagcttgtttaaaagcatatttcatatgaacgcctttaaa 8351322  T
Q  205 tcagcaatgtgatctaagtttaaata 230  Q
    | || |||||||| |||| |||||||    
T  8351321 taagtaatgtgatataagattaaata 8351296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 266
Target Start/End: Original strand, 13640730 - 13640877
Alignment:
Q  119 ctttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatc 218  Q
    |||||||||  |||||||| | |||||||||| |||||  | |   |||| |||| |||||| ||| || ||| || ||| |||||| |||||||||||     
T  13640730 ctttttaggtatgagtctggctttctgaaagcctgatacaaccttctagcatgttcaaaagcatatatcttatgaacatcattaaataagcaatgtgata 13640829  T
Q  219 taagtttaaatagattagcgaactaatatatcaattaaattaaactct 266  Q
    ||||||| |||||| |||| |||||||| |||||||||||||||||||    
T  13640830 taagttttaatagactagctaactaataaatcaattaaattaaactct 13640877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 246
Target Start/End: Original strand, 5167129 - 5167267
Alignment:
Q  108 tcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatca 207  Q
    ||||||||||||||||||||||||||| ||  ||||||||||| ||||| |  |   ||| |||||||||||||||| || ||| |  ||||||||||      
T  5167129 tcatagacttactttttaggcctgagtttggtcttctgaaagcctgatacggcctactagtctgtttaaaagcctatatcttatgatcatctttaaatat 5167228  T
Q  208 gcaatgtgatctaagtttaaatagattagcgaactaata 246  Q
    ||||| | |||||||||||||| ||  ||||||||||||    
T  5167229 gcaatataatctaagtttaaatggacgagcgaactaata 5167267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 266
Target Start/End: Complemental strand, 6248951 - 6248850
Alignment:
Q  165 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 264  Q
    |||||||||||||||  ||| || ||| || || ||||||| ||||||||  |||||||||||||||| | ||||| |||||||||| ||| ||||||||    
T  6248951 tagcctgtttaaaagattatatcttattaacatatttaaataagcaatgttgtctaagtttaaatagactggcgaattaatatatcagttagattaaact 6248852  T
Q  265 ct 266  Q
    ||    
T  6248851 ct 6248850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 253
Target Start/End: Complemental strand, 5423200 - 5423086
Alignment:
Q  139 ccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcg 238  Q
    |||| ||||||| |||||||  ||| ||| ||||  ||||| ||||||||||| ||||||||||||| |  | |||||| ||| ||||||||||| |||     
T  5423200 ccttttgaaagcatgatatggcccgatagtctgtgcaaaagtctatttcatattaatatctttaaataaatattgtgatataaatttaaatagatgagca 5423101  T
Q  239 aactaatatatcaat 253  Q
    |||||||| ||||||    
T  5423100 aactaatagatcaat 5423086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 2803825 - 2803874
Alignment:
Q  181 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaata 230  Q
    ||||||||||| ||||||||||||| || |||||||||||| ||||||||    
T  2803825 ctatttcatatgaatatctttaaataagtaatgtgatctaattttaaata 2803874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 24556912 - 24556875
Alignment:
Q  11 aattagggatgggaataggctaggccgagctaagcttt 48  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  24556912 aattagggatgggaataggctaggtcgagctaggcttt 24556875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 231
Target Start/End: Complemental strand, 6228406 - 6228374
Alignment:
Q  199 tttaaatcagcaatgtgatctaagtttaaatag 231  Q
    ||||||| |||||||||||||||||||||||||    
T  6228406 tttaaataagcaatgtgatctaagtttaaatag 6228374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 170 - 272
Target Start/End: Complemental strand, 53164 - 53062
Alignment:
Q  170 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcct 269  Q
    |||||||||||||||||||||| || |||||||||| | ||||  ||||||||||||||||||||| |||||||||||||| |||||||||||||||| |    
T  53164 tgtttaaaagcctatttcatatgaacatctttaaataaacaattagatctaagtttaaatagattaacgaactaatatatcgattaaattaaactctctt 53065  T
Q  270 ttg 272  Q
    |||    
T  53064 ttg 53062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 263
Target Start/End: Complemental strand, 11186 - 11006
Alignment:
Q  82 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 181  Q
    |||||||||| ||||||| || ||| |||||| ||||| |||||| | ||||||||||||||  ||||  |  || | || | || |||||||||| ||     
T  11186 aaggcctaagtctggccttcggcctatcataggcttacgttttagacttgagtctgaccttccaaaagtcttctacggtctgctaacctgtttaaa-gca 11088  T
Q  182 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaac 263  Q
    |||||||||| || |||||||||| |||||| ||||||||||||||||||| || | ||||||||||| ||||| |||||||    
T  11087 tatttcatatgaacatctttaaataagcaatatgatctaagtttaaatagactatcaaactaatatataaattatattaaac 11006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 262
Target Start/End: Original strand, 7191 - 7347
Alignment:
Q  106 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 205  Q
    |||||||||||||||||||||| || || ||  |||| ||||||| ||||  ||   | |||||| |||||||| |||||||||||||| ||||||||||    
T  7191 tgtcatagacttactttttaggtcttagcctagccttatgaaagcctgattagacttgctagcctatttaaaagtctatttcatataaacatctttaaat 7290  T
Q  206 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaa 262  Q
     || |||| |||||||  |||||| || || | | |||||| |||||| | ||||||    
T  7291 aagtaatgcgatctaatgttaaattgactaccaagctaatagatcaatgatattaaa 7347  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 325063 - 324970
Alignment:
Q  170 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaac 263  Q
    ||||||||||||||||| || | || |||||||||| || ||||||||||||  ||||||||| || |||| ||||| |||||| | |||||||    
T  325063 tgtttaaaagcctattttatttgaagatctttaaataagtaatgtgatctaatgttaaatagactaacgaattaataaatcaatgatattaaac 324970  T

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Target: scaffold0504 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 246
Target Start/End: Complemental strand, 12064 - 11948
Alignment:
Q  130 tgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaat 229  Q
    ||||||||||||||| ||||  | ||| |||| | ||| ||||||||||  |||| |||||| |||||||||| || | ||||||||| |||||| ||||    
T  12064 tgagtctgaccttctaaaagtctaatacgatctgctagtctgtttaaaaatctatatcatatgaatatctttatataaacaatgtgatttaagttgaaat 11965  T
Q  230 agattagcgaactaata 246  Q
    | | ||| |||||||||    
T  11964 aaactagagaactaata 11948  T

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