View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16815_high_54 (Length: 273)
Name: NF16815_high_54
Description: NF16815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16815_high_54 |
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Alignment Details
Target: chr2 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 139 - 269
Target Start/End: Complemental strand, 698222 - 698092
Alignment:
| Q |
139 |
gggtgggttagccaatgaaatttaaacgagatattataaagaaaatgtaattgattaatttggtattttaaaataacttactgtttgtttgattttacct |
238 |
Q |
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| T |
698222 |
gggtgggttagccaatgaaatttaaacgagatattataaagaaaatgtaattgattaatttggtattttaaaataacttactgtgtgtttgattttacct |
698123 |
T |
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| Q |
239 |
ttgaagagttaatagtgattcatgcattcat |
269 |
Q |
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| T |
698122 |
ttaaagagttaagagtgattcatgcattcat |
698092 |
T |
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