View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16815_high_57 (Length: 272)
Name: NF16815_high_57
Description: NF16815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16815_high_57 |
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Alignment Details
Target: chr5 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 40839476 - 40839732
Alignment:
| Q |
1 |
tggcaaatatgtaccatggtatctgatccctatgattgcctttgttccaatcatttcagccctattccctggattcacaccccatcctatccacccatcc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40839476 |
tggcaaatatgtaccatggtatctgatccctatgattgcctttgttccaatcatttcagccctattccctggattcacaccccatcctatccacccatcc |
40839575 |
T |
|
| Q |
101 |
ccttgacctatatttgcaccaaataagatttcaagtattgtggttgagtttgtgccgttgtggtaattccaagcaaattcggctcctagagttcgtaatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40839576 |
ccttgacctatatttgcaccaaataagatttcaagtattgtggttgagtttgtgccgttgtggtaattccaagcaaattcggctcctagagttcgtaatg |
40839675 |
T |
|
| Q |
201 |
gtttgcattttgttatgtttcttttttccatgagtttcgcgaatttatggctgcatg |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
40839676 |
gtttgcattttgttatgtttcttttttccatgagtttcgcaaatttatggctgcatg |
40839732 |
T |
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