View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16815_low_64 (Length: 268)
Name: NF16815_low_64
Description: NF16815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16815_low_64 |
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Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 361371 - 361623
Alignment:
| Q |
1 |
catatattgtaaccgaaaaactacatgtgaaaatttcgtgtcattattttcgaacactagacatatcttcaatatgatttgtgatgtgtcaatgctaaat |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
361371 |
catatattgtaaccgaaaaactacatgtgaaaatttcgtgtcattattttccaacactagacatatcttcaatatgatttgtgatgtgtcaatgctaaat |
361470 |
T |
|
| Q |
101 |
tgttaggtagctaattagttggaacatatacacttcattatggtctccgacactaatacgacaactatatacacatgtgattatattcaataaatttcta |
200 |
Q |
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||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
361471 |
tgttaggtagctaattagttgaaacatatacacttcatcatggtctccaacactaatacgacaactatatacacatgtgattatattcaataaattttta |
361570 |
T |
|
| Q |
201 |
acattattactagtgtccatatgttagtgtaccctaccgacacacgtgattac |
253 |
Q |
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|||||||||| |||||||||||||||||||||| |||||| |||||||||||| |
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| T |
361571 |
acattattacaagtgtccatatgttagtgtaccataccgatacacgtgattac |
361623 |
T |
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