View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16816_high_6 (Length: 444)

Name: NF16816_high_6
Description: NF16816
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16816_high_6
NF16816_high_6
[»] chr7 (34 HSPs)
chr7 (43-429)||(38656207-38656592)
chr7 (32-100)||(9363387-9363455)
chr7 (32-100)||(17945068-17945135)
chr7 (32-100)||(36703875-36703943)
chr7 (32-100)||(45815259-45815327)
chr7 (32-97)||(26018043-26018108)
chr7 (32-100)||(35600671-35600739)
chr7 (32-99)||(38340386-38340453)
chr7 (43-110)||(46260106-46260173)
chr7 (32-102)||(6269364-6269434)
chr7 (32-109)||(2756933-2757009)
chr7 (32-99)||(19880309-19880370)
chr7 (32-92)||(33776367-33776427)
chr7 (32-100)||(41430155-41430223)
chr7 (32-100)||(42584802-42584870)
chr7 (32-100)||(47012573-47012641)
chr7 (33-100)||(47448826-47448893)
chr7 (34-100)||(12007191-12007257)
chr7 (32-102)||(33212040-33212109)
chr7 (34-100)||(35586778-35586844)
chr7 (34-100)||(37899323-37899389)
chr7 (34-100)||(46829479-46829545)
chr7 (32-101)||(17500696-17500764)
chr7 (32-101)||(17552450-17552518)
chr7 (32-101)||(34108858-34108927)
chr7 (32-101)||(34978295-34978364)
chr7 (32-105)||(40854658-40854731)
chr7 (32-105)||(47954105-47954178)
chr7 (32-100)||(13152593-13152660)
chr7 (32-100)||(18111615-18111683)
chr7 (32-100)||(21752658-21752725)
chr7 (32-100)||(30941386-30941453)
chr7 (32-100)||(31398124-31398191)
chr7 (32-100)||(41893915-41893983)
[»] chr6 (26 HSPs)
chr6 (32-101)||(10335549-10335618)
chr6 (32-100)||(18141304-18141372)
chr6 (32-100)||(2242025-2242093)
chr6 (32-104)||(6531186-6531258)
chr6 (32-100)||(8505777-8505845)
chr6 (33-101)||(11635539-11635607)
chr6 (32-100)||(16337926-16337994)
chr6 (33-109)||(18065094-18065170)
chr6 (32-100)||(20822871-20822939)
chr6 (34-97)||(34570600-34570663)
chr6 (32-101)||(1376363-1376432)
chr6 (32-101)||(1384111-1384180)
chr6 (32-101)||(25811842-25811910)
chr6 (32-101)||(34047386-34047454)
chr6 (32-100)||(552793-552860)
chr6 (32-108)||(5522641-5522717)
chr6 (32-100)||(9188948-9189015)
chr6 (32-100)||(16368050-16368118)
chr6 (32-100)||(17551382-17551450)
chr6 (32-100)||(19789080-19789147)
chr6 (32-100)||(22079567-22079634)
chr6 (32-100)||(24842368-24842436)
chr6 (32-100)||(25127836-25127904)
chr6 (36-100)||(30906671-30906734)
chr6 (32-100)||(32046698-32046766)
chr6 (32-100)||(32459520-32459588)
[»] chr3 (36 HSPs)
chr3 (32-101)||(536279-536348)
chr3 (32-110)||(14207261-14207339)
chr3 (32-110)||(14215009-14215087)
chr3 (32-100)||(48152289-48152357)
chr3 (32-102)||(29030810-29030880)
chr3 (34-102)||(29573361-29573429)
chr3 (32-100)||(37894246-37894314)
chr3 (33-100)||(10811135-10811202)
chr3 (32-102)||(51137039-51137109)
chr3 (43-100)||(19150333-19150390)
chr3 (32-109)||(29917027-29917104)
chr3 (32-109)||(29966180-29966257)
chr3 (32-100)||(41670585-41670653)
chr3 (32-100)||(55399999-55400067)
chr3 (34-105)||(27718791-27718862)
chr3 (36-107)||(34057960-34058031)
chr3 (32-102)||(16969570-16969639)
chr3 (32-102)||(48352994-48353064)
chr3 (32-101)||(26014811-26014879)
chr3 (32-101)||(37302545-37302613)
chr3 (32-100)||(7218-7285)
chr3 (32-100)||(288725-288793)
chr3 (32-112)||(3953478-3953558)
chr3 (32-100)||(16479632-16479699)
chr3 (32-100)||(24095409-24095477)
chr3 (32-100)||(26550237-26550305)
chr3 (32-100)||(26996316-26996384)
chr3 (32-100)||(27168685-27168753)
chr3 (36-104)||(31017402-31017469)
chr3 (32-104)||(32457759-32457830)
chr3 (32-100)||(40159842-40159909)
chr3 (32-100)||(45293032-45293100)
chr3 (32-96)||(45693750-45693814)
chr3 (32-100)||(48405410-48405478)
chr3 (32-100)||(49021711-49021779)
chr3 (32-100)||(49417575-49417643)
[»] chr1 (47 HSPs)
chr1 (32-109)||(37516515-37516592)
chr1 (32-100)||(34254354-34254422)
chr1 (32-100)||(49660179-49660247)
chr1 (32-104)||(49931549-49931621)
chr1 (34-100)||(33070602-33070668)
chr1 (32-100)||(30535991-30536059)
chr1 (32-108)||(43560196-43560272)
chr1 (32-102)||(47642610-47642680)
chr1 (32-101)||(15470060-15470129)
chr1 (32-101)||(23645410-23645478)
chr1 (32-101)||(49020407-49020476)
chr1 (32-100)||(649768-649836)
chr1 (32-100)||(1689391-1689459)
chr1 (32-100)||(9566964-9567032)
chr1 (32-100)||(10890049-10890117)
chr1 (32-100)||(11947795-11947863)
chr1 (32-100)||(13489662-13489730)
chr1 (32-100)||(15705065-15705133)
chr1 (32-100)||(21433404-21433472)
chr1 (32-100)||(37619544-37619611)
chr1 (32-100)||(51286370-51286438)
chr1 (32-100)||(52362482-52362550)
chr1 (33-100)||(4213072-4213139)
chr1 (32-103)||(5771751-5771822)
chr1 (32-111)||(29359628-29359706)
chr1 (32-102)||(30744983-30745054)
chr1 (32-102)||(30766434-30766505)
chr1 (33-104)||(51436776-51436847)
chr1 (36-107)||(52714908-52714979)
chr1 (34-100)||(48983673-48983739)
chr1 (32-101)||(2362355-2362423)
chr1 (32-101)||(37685330-37685398)
chr1 (32-101)||(37700120-37700188)
chr1 (32-97)||(39712381-39712446)
chr1 (32-65)||(42539441-42539474)
chr1 (32-68)||(7171239-7171275)
chr1 (32-100)||(12999826-12999893)
chr1 (32-100)||(25702219-25702286)
chr1 (32-100)||(32915075-32915143)
chr1 (32-100)||(33076119-33076187)
chr1 (33-101)||(35414594-35414661)
chr1 (32-100)||(44672034-44672101)
chr1 (81-109)||(46758369-46758397)
chr1 (32-100)||(47214208-47214276)
chr1 (32-100)||(48858823-48858891)
chr1 (74-110)||(50239198-50239234)
chr1 (32-100)||(52437494-52437562)
[»] scaffold0432 (1 HSPs)
scaffold0432 (33-100)||(6524-6591)
[»] chr4 (23 HSPs)
chr4 (32-112)||(36123463-36123544)
chr4 (32-100)||(21025601-21025669)
chr4 (32-100)||(24509391-24509459)
chr4 (32-111)||(1795985-1796064)
chr4 (34-101)||(3078913-3078980)
chr4 (32-102)||(46634098-46634167)
chr4 (32-101)||(39881034-39881102)
chr4 (32-100)||(34363553-34363621)
chr4 (32-100)||(39158105-39158173)
chr4 (32-100)||(44257733-44257801)
chr4 (32-107)||(13139141-13139216)
chr4 (34-100)||(37514137-37514203)
chr4 (34-100)||(42815404-42815470)
chr4 (34-100)||(51255746-51255812)
chr4 (32-101)||(149488-149557)
chr4 (34-99)||(2401611-2401676)
chr4 (32-97)||(42916653-42916718)
chr4 (32-103)||(53796659-53796723)
chr4 (32-100)||(5249868-5249936)
chr4 (32-100)||(5932767-5932835)
chr4 (32-100)||(17363230-17363297)
chr4 (32-100)||(41609683-41609750)
chr4 (32-100)||(55609169-55609236)
[»] chr8 (31 HSPs)
chr8 (32-100)||(33100472-33100540)
chr8 (32-100)||(43285966-43286034)
chr8 (32-106)||(13884164-13884237)
chr8 (32-102)||(25830249-25830319)
chr8 (32-101)||(7271851-7271919)
chr8 (32-101)||(25987790-25987859)
chr8 (32-101)||(28756534-28756603)
chr8 (32-93)||(39692302-39692363)
chr8 (32-100)||(67164-67232)
chr8 (32-100)||(10692439-10692506)
chr8 (33-105)||(33451567-33451639)
chr8 (32-100)||(35067160-35067228)
chr8 (44-100)||(35792069-35792125)
chr8 (32-100)||(43715875-43715942)
chr8 (32-99)||(44061718-44061785)
chr8 (46-108)||(1268793-1268854)
chr8 (34-100)||(10644807-10644873)
chr8 (36-105)||(12707144-12707213)
chr8 (34-103)||(22960422-22960491)
chr8 (32-101)||(23754710-23754779)
chr8 (32-101)||(26026895-26026964)
chr8 (32-97)||(33279552-33279617)
chr8 (32-109)||(43397772-43397848)
chr8 (32-100)||(2667704-2667772)
chr8 (32-100)||(4658266-4658334)
chr8 (32-100)||(7598708-7598776)
chr8 (32-100)||(8410347-8410415)
chr8 (32-100)||(9550411-9550478)
chr8 (43-99)||(10592295-10592351)
chr8 (34-102)||(27325756-27325823)
chr8 (32-100)||(37449429-37449496)
[»] chr5 (30 HSPs)
chr5 (32-109)||(9742383-9742461)
chr5 (32-102)||(38293362-38293432)
chr5 (32-109)||(189706-189783)
chr5 (32-101)||(22098254-22098323)
chr5 (32-100)||(27546063-27546131)
chr5 (32-100)||(35075579-35075647)
chr5 (34-100)||(6940155-6940221)
chr5 (34-100)||(18695318-18695384)
chr5 (32-105)||(4088438-4088511)
chr5 (32-101)||(6517711-6517780)
chr5 (32-101)||(28306136-28306204)
chr5 (33-101)||(1764223-1764290)
chr5 (32-108)||(12779610-12779685)
chr5 (32-100)||(19481185-19481253)
chr5 (32-100)||(19839989-19840057)
chr5 (32-103)||(31708367-31708437)
chr5 (32-102)||(16690497-16690567)
chr5 (51-100)||(14011317-14011366)
chr5 (32-101)||(40829413-40829482)
chr5 (32-100)||(611864-611932)
chr5 (32-100)||(884441-884509)
chr5 (32-100)||(1274358-1274425)
chr5 (44-100)||(10659088-10659144)
chr5 (32-100)||(11148511-11148579)
chr5 (32-108)||(12718384-12718459)
chr5 (32-100)||(13089785-13089853)
chr5 (32-100)||(18638829-18638896)
chr5 (32-100)||(26686881-26686949)
chr5 (32-100)||(26956612-26956680)
chr5 (32-100)||(32912038-32912106)
[»] scaffold0416 (1 HSPs)
scaffold0416 (32-97)||(6861-6926)
[»] chr2 (26 HSPs)
chr2 (32-101)||(10833649-10833718)
chr2 (32-104)||(6999071-6999143)
chr2 (32-100)||(24766152-24766220)
chr2 (32-101)||(9048405-9048474)
chr2 (36-101)||(12784406-12784471)
chr2 (32-108)||(30973995-30974068)
chr2 (36-104)||(6170626-6170694)
chr2 (32-100)||(6336252-6336320)
chr2 (32-100)||(9207590-9207657)
chr2 (32-100)||(13711370-13711438)
chr2 (32-100)||(41042254-41042321)
chr2 (32-100)||(42532742-42532810)
chr2 (34-101)||(34134776-34134843)
chr2 (32-110)||(43057053-43057132)
chr2 (34-100)||(5031923-5031989)
chr2 (33-101)||(3771370-3771438)
chr2 (32-100)||(7497995-7498062)
chr2 (32-100)||(9634439-9634507)
chr2 (32-100)||(14328381-14328449)
chr2 (32-100)||(18254213-18254280)
chr2 (32-104)||(22888825-22888896)
chr2 (32-100)||(31635814-31635881)
chr2 (36-104)||(35334516-35334584)
chr2 (32-100)||(38560678-38560746)
chr2 (32-100)||(42665816-42665883)
chr2 (32-100)||(44050015-44050083)
[»] scaffold0060 (1 HSPs)
scaffold0060 (32-101)||(6816-6884)
[»] scaffold0201 (1 HSPs)
scaffold0201 (33-101)||(8471-8539)
[»] scaffold0184 (1 HSPs)
scaffold0184 (32-84)||(16791-16843)
[»] scaffold0078 (1 HSPs)
scaffold0078 (32-84)||(56001-56053)
[»] scaffold0003 (1 HSPs)
scaffold0003 (32-100)||(366294-366361)


Alignment Details
Target: chr7 (Bit Score: 355; Significance: 0; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 43 - 429
Target Start/End: Complemental strand, 38656592 - 38656207
Alignment:
Q  43 tgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaaatgtacttgtacttgatctggatttcttgcagtt 142  Q
    |||||||||||||||||| ||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38656592 tgagagataaagttgtcaaataagttctcacaaaatggttgtcaaaatatcatttctcaaaataaaatgtacttgtacttgatctggatttcttgcagtt 38656493  T
Q  143 gatgtcaagtgcagggaaggttcctacatttactgcaaatttttactaaaagacaaaatagaaagagatttcacactttttcattgctgttatctcaaag 242  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38656492 gatgtcaagtgcagggaaggttcctacatttactgcaaatttt-actaaaagacaaaatagaaagagatttcacactttttcattgctgttatctcaaag 38656394  T
Q  243 attaaaaaagggtggatcattcaagttctgggtccattcaactaaaaatagttcaatgaataaataaaatgtaatttacaagtgaatcaaaagataccaa 342  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38656393 ataaaaaaagggtggatcattcaagttctgggtccattcaactaaaaatagttcaatgaataaataaaatgtaatttacaagtgaatcaaaagataccaa 38656294  T
Q  343 tttaaataagtaacaactacatctccctcaagaaacatccaataacagacaaaagaatacaaaacaaaacacgctatataaatatgt 429  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38656293 tttaaataagtaacaactacatctccctcaagaaacatccaacaacagacaaaagaatacaaaacaaaacacgctatataaatatgt 38656207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 9363455 - 9363387
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    ||||||| || | |||||||||||||||||| ||||| |||||||||||||||  ||||||||||||||    
T  9363455 taatgtgtgtattagagataaagttgtcacaaaagttgttataaaatgattgtacaaatatcatttctc 9363387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 17945135 - 17945068
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||||||||||||||||| |||| | | |||||| ||||||||||||||||||||    
T  17945135 taatgtgagtatgagagataaagttgtcacat-agttgtcacaaaatggttgtcaaaatatcatttctc 17945068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 36703875 - 36703943
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||||||| |||||||||| ||| | | |||||| ||||||||||||||||||||    
T  36703875 taatgtgagtatgagagataaaattgtcacatatgttgtcacaaaatggttgtcaaaatatcatttctc 36703943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 45815259 - 45815327
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||||||||||||||||||  || | | |||||| ||||||||||||||||||||    
T  45815259 taatgtgagtatgagagataaagttgtcacatatattgtcacaaaatggttgtcaaaatatcatttctc 45815327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 26018108 - 26018043
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcattt 97  Q
    |||||||| | |||||||||| ||||||||| ||||| |||||||||||||||  |||||||||||    
T  26018108 taatgtgaatatgagagataatgttgtcacaaaagttattataaaatgattgtacaaatatcattt 26018043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 35600739 - 35600671
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||| ||||||| |||||||||| ||| | | |||||| ||||||||||||||||||||    
T  35600739 taatgtgagtatgaaagataaaattgtcacataggttgtcacaaaatggttgtcaaaatatcatttctc 35600671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 38340386 - 38340453
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttct 99  Q
    |||||||||| |||||||||||||||||||| ||||| ||| |||||| || |  |||||||||||||    
T  38340386 taatgtgagtatgagagataaagttgtcacaaaagttgttaaaaaatgcttttacaaatatcatttct 38340453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 46260106 - 46260173
Alignment:
Q  43 tgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaaat 110  Q
    |||||||||||||||||||| ||||| || ||||||| ||||  |||||||||||||| ||| |||||    
T  46260106 tgagagataaagttgtcacaaaagttgttttaaaatggttgtataaatatcatttctctaaaaaaaat 46260173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 6269434 - 6269364
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaa 102  Q
    |||||||||| ||||||| |||||||||||| || || |||||||||| ||||  ||||||||||| ||||    
T  6269434 taatgtgagtatgagagagaaagttgtcacaaaaattgttataaaatggttgtacaaatatcatttatcaa 6269364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 2756933 - 2757009
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaaa 109  Q
    |||||||||| |||||||||||||||||| | ||||| ||| ||| || ||||  ||||||||||||| |||||||||    
T  2756933 taatgtgagtatgagagataaagttgtca-aaaagttgttagaaattggttgtacaaatatcatttctgaaaataaaa 2757009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 19880309 - 19880370
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttct 99  Q
    |||||||||| |||||||||||||||||||||| |      |||||||||||| ||||||||||||||    
T  19880309 taatgtgagtatgagagataaagttgtcacatagg------taaaatgattgtgaaaatatcatttct 19880370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 33776427 - 33776367
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatat 92  Q
    |||||||||| |||||||||||||||||| ||| ||| | | |||||| ||||||||||||    
T  33776427 taatgtgagtatgagagataaagttgtcatataggttgtcacaaaatggttgtcaaaatat 33776367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 41430155 - 41430223
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| | ||||| |||||||||||| ||||| ||| |||||| ||||| | ||||||||||||    
T  41430155 taatgtgagtataagagagaaagttgtcacaaaagttgttagaaaatggttgtccatatatcatttctc 41430223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 42584870 - 42584802
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| ||| |||||| ||||  | ||||||||||||    
T  42584870 taatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacatatatcatttctc 42584802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 47012573 - 47012641
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| | ||||||||||| |||||||| || || ||| |||||||||||  ||||||||||||||    
T  47012573 taatgtgaatatgagagataaaattgtcacaaaaattattagaaaatgattgtacaaatatcatttctc 47012641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 47448893 - 47448826
Alignment:
Q  33 aatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    ||||||||| ||||||| |||||||||||| ||||| | | |||||| ||||  ||||||||||||||    
T  47448893 aatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 47448826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 12007191 - 12007257
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| ||||||| |||||||||||| ||||| | | |||||| ||||  ||||||||||||||    
T  12007191 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 12007257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 33212109 - 33212040
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaa 102  Q
    |||||||||| |||||||||||||||||| | || || ||| |||||| ||||  ||||||||||||||||    
T  33212109 taatgtgagtatgagagataaagttgtca-aaaaattgttagaaaatggttgtacaaatatcatttctcaa 33212040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 35586778 - 35586844
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| ||||||| |||||||||||| ||||| | ||||||||  |||  ||||||||||||||    
T  35586778 atgtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaatatcatttctc 35586844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 37899389 - 37899323
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| |||||||||||||||||||| ||||| | | ||||||  |||  ||||||||||||||    
T  37899389 atgtgagtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctc 37899323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 46829545 - 46829479
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| ||||||| |||||||||||| || || ||| |||||| ||||  ||||||||||||||    
T  46829545 atgtgagtatgagagagaaagttgtcacaaaaattgttacaaaatggttgtacaaatatcatttctc 46829479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 17500764 - 17500696
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| |||||||||||||||||| | ||||| | ||||| || ||||  |||||||||||||||    
T  17500764 taatgtgagtatgagagataaagttgtca-aaaagttataataaagtggttgtacaaatatcatttctca 17500696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 17552450 - 17552518
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| |||||||||||||||||| | ||||| | ||||| || ||||  |||||||||||||||    
T  17552450 taatgtgagtatgagagataaagttgtca-aaaagttataataaagtggttgtacaaatatcatttctca 17552518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 34108858 - 34108927
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||||| ||| |||||||| ||||| ||| |||||| ||||  | |||||||||||||    
T  34108858 taatgtgagtatgagagagaaaattgtcacaaaagttgttagaaaatggttgtacatatatcatttctca 34108927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 34978364 - 34978295
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||||| |||||||||||| || || | | ||| |||||||  |||||||||||||||    
T  34978364 taatgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaagtgattgttcaaatatcatttctca 34978295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 40854658 - 40854731
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaat 105  Q
    |||||||||| ||||||| ||| |||||||| ||||| ||| ||||||  |||  | |||||||||||||||||    
T  40854658 taatgtgagtatgagagagaaaattgtcacaaaagttgttagaaaatggatgtacagatatcatttctcaaaat 40854731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 47954105 - 47954178
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaat 105  Q
    |||||||||| ||| ||| |||||||||||| ||||| ||| |||||||||||  ||||| | |||||| ||||    
T  47954105 taatgtgagtatgaaagagaaagttgtcacaaaagttgttagaaaatgattgtgcaaataccgtttctctaaat 47954178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 13152660 - 13152593
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | | |||||| ||||  ||||||||||||||    
T  13152660 taatgtgagtatgagagagaaagttgtcacaaaagttgtca-aaaatggttgttcaaatatcatttctc 13152593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 18111615 - 18111683
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| ||| |||||||| || || |||||||||| ||||  || |||||||||||    
T  18111615 taatgtgagtatgagagagaaaattgtcacaaaaattattataaaatggttgtagaagtatcatttctc 18111683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 21752725 - 21752658
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| |||||||||||||||||| | ||||| | | ||| |||||||  ||||||||||||||    
T  21752725 taatgtgagtatgagagataaagttgtca-aaaagttgtgagaaagtgattgtacaaatatcatttctc 21752658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 30941453 - 30941386
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| |||||  || |||||| ||||  ||||||||||||||    
T  30941453 taatgtgagtatgagagagaaagttgtcacaaaagtt-gtaaaaaatggttgttcaaatatcatttctc 30941386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 31398191 - 31398124
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||| ||||| ||||| | |||||||| ||||  ||||||||||||||    
T  31398191 taatgtgagtatgagagagaaagttatcacaaaagttgt-ataaaatggttgtacaaatatcatttctc 31398124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 41893983 - 41893915
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||| ||| |||||||||||| ||||| | ||||||||  |||  ||||||||||||||    
T  41893983 taatgtgagtatgaaagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctc 41893915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 10335618 - 10335549
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| |||||||||||||||||||||||||  | | |||||| |||||||||||||||||||||    
T  10335618 taatgtgagtatgagagataaagttgtcacataagtcgtcacaaaatggttgtcaaaatatcatttctca 10335549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 18141304 - 18141372
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | ||||||||| |||  ||||||||||||||    
T  18141304 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatgaatgtttaaatatcatttctc 18141372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 2242025 - 2242093
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| || || | | |||||||||||  ||||||||||||||    
T  2242025 taatgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatgattgttcaaatatcatttctc 2242093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 6531186 - 6531258
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaa 104  Q
    |||||||||| ||||||| ||||||||| |||||||| | | ||||||  |||  ||||||||||||||||||    
T  6531186 taatgtgagtatgagagagaaagttgtcccataagttgtcacaaaatggatgttcaaatatcatttctcaaaa 6531258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 8505777 - 8505845
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| | ||||||| |||||||||||| ||||| | | |||||||||||  ||||||||||||||    
T  8505777 taatgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatcatttctc 8505845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 11635539 - 11635607
Alignment:
Q  33 aatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    ||||||| | ||||||| |||||||||||| ||||| | | |||||||||||  |||||||||||||||    
T  11635539 aatgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatcatttctca 11635607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 16337926 - 16337994
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||| ||| ||||| |||||||||| ||||   |||||||||||||    
T  16337926 taatgtgagtatgagagagaaagttgttacaaaagttattataaaatggttgtaccaatatcatttctc 16337994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 18065094 - 18065170
Alignment:
Q  33 aatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaaa 109  Q
    |||||| || ||||||| |||||||||||| ||||| | | ||| |||||||  ||||||||||||||| |||||||    
T  18065094 aatgtgtgtatgagagaaaaagttgtcacaaaagttgtcaaaaagtgattgttcaaatatcatttctcataataaaa 18065170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 20822871 - 20822939
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | ||||||||  |||  ||||||||||||||    
T  20822871 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctc 20822939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 34570600 - 34570663
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcattt 97  Q
    |||||||| ||||||| |||||||||||| ||||| ||| |||||| ||||  |||||||||||    
T  34570600 atgtgagtatgagagagaaagttgtcacaaaagttattacaaaatggttgtacaaatatcattt 34570663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 1376432 - 1376363
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| | ||||| |||||||||||| ||||| ||| |||||| ||||  |||||| ||||||||    
T  1376432 taatgtgagtataagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatataatttctca 1376363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 1384180 - 1384111
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| | ||||| |||||||||||| ||||| ||| |||||| ||||  |||||| ||||||||    
T  1384180 taatgtgagtataagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatataatttctca 1384111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 25811842 - 25811910
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||||| |||||||||||| |||||  || |||||| ||||  |||||||||||||||    
T  25811842 taatgtgagtatgagagagaaagttgtcacaaaagtt-gtaaaaaatggttgttcaaatatcatttctca 25811910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 34047454 - 34047386
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||||| |||||||||||| |||||  || |||||| ||||  |||||||||||||||    
T  34047454 taatgtgagtatgagagagaaagttgtcacaaaagtt-gtaaaaaatggttgttcaaatatcatttctca 34047386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 552860 - 552793
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| | ||||||| ||||||||||||||||||  || |||||| ||||  ||||||||||||||    
T  552860 taatgtgaatatgagagacaaagttgtcacataagtt-gtaaaaaatgtttgttcaaatatcatttctc 552793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 5522641 - 5522717
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaa 108  Q
    |||||||| | |||||||||||||||||||| || || | | || |||| |||  ||||||||||| ||||||||||    
T  5522641 taatgtgaatatgagagataaagttgtcacaaaaattatcaaaagatgaatgttcaaatatcatttttcaaaataaa 5522717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 9188948 - 9189015
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| |||||||||||||||||  | ||||| ||| |||||| ||||  ||||||||||||||    
T  9188948 taatgtgagtatgagagataaagttgtc-taaaagttgttaaaaaatggttgtacaaatatcatttctc 9189015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 16368050 - 16368118
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||| | |||||||| ||| || || |||||||||| ||||  ||||||||||||||    
T  16368050 taatgtgagtatgagaaagaaagttgttacaaaaattattataaaatggttgtacaaatatcatttctc 16368118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 17551382 - 17551450
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||| ||| ||||| | | |||||| ||||  ||||||||||||||    
T  17551382 taatgtgagtatgagagagaaagttgttacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 17551450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 19789080 - 19789147
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||| | ||||| | |||||||| ||||  ||||||||||||||    
T  19789080 taatgtgagtatgagagagaaagttgtcaaa-aagttgtaataaaatggttgtacaaatatcatttctc 19789147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 22079567 - 22079634
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| |||||  || |||||| ||||  ||||||||||||||    
T  22079567 taatgtgagtgtgagagagaaagttgtcacaaaagtt-gtaaaaaatggttgttcaaatatcatttctc 22079634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 24842436 - 24842368
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||| ||||||| ||||| | || |||||| |||  ||||||||||||||    
T  24842436 taatgtgagtatgagagagaaagctgtcacaaaagttgtcattaaatgaatgttcaaatatcatttctc 24842368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 25127836 - 25127904
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| | ||||| |||||| ||||| ||||| ||| |||||| ||||  ||||||||||||||    
T  25127836 taatgtgagtatcagagagaaagttttcacaaaagttgttacaaaatggttgtacaaatatcatttctc 25127904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 30906671 - 30906734
Alignment:
Q  36 gtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||| |||||||||||||||||| | ||||| | ||||||||| |||  ||||||||||||||    
T  30906671 gtgagtatgagagataaagttgtca-aaaagttgtcataaaatgaatgtagaaatatcatttctc 30906734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 32046766 - 32046698
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| || ||||||||||||||| ||| |||||   |||  ||||||||||||||    
T  32046766 taatgtgagtatgagagagaaggttgtcacataagttgttacaaaattgatgttcaaatatcatttctc 32046698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 32459520 - 32459588
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| | ||||||| |||||||||||| ||||| | ||||||||  |||  ||||||||||||||    
T  32459520 taatgtgaatatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctc 32459588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 536279 - 536348
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| |||||||||||||||||||||| ||| | | |||||| |||||||||||||||||||||    
T  536279 taatgtgagtgtgagagataaagttgtcacataggttgtcacaaaatggttgtcaaaatatcatttctca 536348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 14207261 - 14207339
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaaat 110  Q
    |||||||||| ||||||| |||||||||||| ||||| ||| |||||  ||||  ||||||||||||||||||||||||    
T  14207261 taatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatcgttgttcaaatatcatttctcaaaataaaat 14207339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 14215009 - 14215087
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaaat 110  Q
    |||||||||| ||||||| |||||||||||| ||||| ||| |||||  ||||  ||||||||||||||||||||||||    
T  14215009 taatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatcgttgttcaaatatcatttctcaaaataaaat 14215087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 48152289 - 48152357
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||||||||||||||||||  || | | |||||| ||||||||||||||||||||    
T  48152289 taatgtgagtatgagagataaagttgtcacatagattgtcacaaaatggttgtcaaaatatcatttctc 48152357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 29030810 - 29030880
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaa 102  Q
    |||||| ||| ||||||||||||||||||| || ||| | | |||||||||||||||||||||||| ||||    
T  29030810 taatgtaagtatgagagataaagttgtcacctaggttgtcacaaaatgattgtcaaaatatcatttatcaa 29030880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 29573361 - 29573429
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaa 102  Q
    |||||||| ||||||| |||||||||||| ||||| ||| |||||| ||||  ||||||||||||||||    
T  29573361 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctcaa 29573429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 37894246 - 37894314
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| ||| |||||| ||||  ||||||||||||||    
T  37894246 taatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 37894314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 10811202 - 10811135
Alignment:
Q  33 aatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    ||||||||| ||||||| |||||||||||| ||||| | |||||||| ||||  ||||||||||||||    
T  10811202 aatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggttgttcaaatatcatttctc 10811135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 51137039 - 51137109
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaa 102  Q
    |||||| ||||||||||| |||||||||||| ||||| ||| |||||  ||||  ||||||||||||||||    
T  51137039 taatgtaagtctgagagaaaaagttgtcacaaaagttattaaaaaatagttgtacaaatatcatttctcaa 51137109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 19150333 - 19150390
Alignment:
Q  43 tgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    ||||||| |||||||||||| ||||| ||| |||||||||||  ||||||||||||||    
T  19150333 tgagagagaaagttgtcacaaaagttgttaaaaaatgattgtacaaatatcatttctc 19150390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 29917027 - 29917104
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaaa 109  Q
    |||||||||| ||||||| |||||||||||| ||||| |||  ||||||||||  |||||| ||||||| ||| ||||    
T  29917027 taatgtgagtatgagagagaaagttgtcacaaaagttgttaggaaatgattgtacaaatattatttctctaaacaaaa 29917104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 29966180 - 29966257
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaaa 109  Q
    |||||||||| ||||||| |||||||||||| ||||| |||  ||||||||||  |||||| ||||||| ||| ||||    
T  29966180 taatgtgagtatgagagagaaagttgtcacaaaagttgttaggaaatgattgtacaaatattatttctctaaacaaaa 29966257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 41670585 - 41670653
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||||||||||||||| || ||| | | |||||| ||||||  ||||||||||||    
T  41670585 taatgtgagtatgagagataaagttgtcacctaggttgtcacaaaatggttgtcatgatatcatttctc 41670653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 55400067 - 55399999
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | ||||||||  |||  ||||||||||||||    
T  55400067 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctc 55399999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 27718791 - 27718862
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaat 105  Q
    |||||||| ||||||| |||||||||||| ||||| ||| ||||||||| |  || ||||||||||| ||||    
T  27718791 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatgattatacaagtatcatttctctaaat 27718862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 34057960 - 34058031
Alignment:
Q  36 gtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataa 107  Q
    |||||| ||||||| |||||||||||| ||||| | ||||||||  |||  ||||||||||||||| |||||    
T  34057960 gtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaatatcatttctcataataa 34058031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 16969570 - 16969639
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaa 102  Q
    |||||||||| ||||||| |||||||||| | ||||| | | |||||| |||| |||||||||||||||||    
T  16969570 taatgtgagtatgagagagaaagttgtcaaaaaagttgtca-aaaatggttgttaaaatatcatttctcaa 16969639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 48353064 - 48352994
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaa 102  Q
    |||| ||||| ||||||| |||||||||||| ||||| ||| ||||||  |||  ||||||||||||||||    
T  48353064 taatatgagtatgagagagaaagttgtcacaaaagttgttaaaaaatggatgtacaaatatcatttctcaa 48352994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 26014879 - 26014811
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||||| |||||||||||| |||||  || |||||| ||||  |||||||||||||||    
T  26014879 taatgtgagtatgagagagaaagttgtcacaaaagtt-gtaaaaaatggttgttcaaatatcatttctca 26014811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 37302613 - 37302545
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||| | ||||||| |||||||||||| |||||  || |||||| |||| ||||||||||||||||    
T  37302613 taatgtgaatatgagagagaaagttgtcacaaaagtt-gtaaaaaatggttgttaaaatatcatttctca 37302545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 7218 - 7285
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| ||||||||| || ||||| | | |||||||||||  ||||||||||||||    
T  7218 taatgtgagtatgagagagaaagttgtc-caaaagttgtcagaaaatgattgtacaaatatcatttctc 7285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 288793 - 288725
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | | |||||  ||||  ||||||||||||||    
T  288793 taatgtgagtatgagagagaaagttgtcacaaaagttataaaaaaattgttgttcaaatatcatttctc 288725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 3953478 - 3953558
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaaatgt 112  Q
    |||||||||| ||||||| |||||||||||| || || | |||||| |  |||  |||||||||||||||| | |||||||    
T  3953478 taatgtgagtatgagagagaaagttgtcacaaaaattatcataaaagggatgttcaaatatcatttctcaatagaaaatgt 3953558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 16479699 - 16479632
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| |||||  || |||||| ||||  ||||||||||||||    
T  16479699 taatgtgagtatgagagagaaagttgtcacaaaagtt-gtacaaaatggttgtacaaatatcatttctc 16479632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 24095409 - 24095477
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| || || | ||||||||  |||  ||||||||||||||    
T  24095409 taatgtgagtatgagagagaaagttgtcacaaaaattatcataaaatggatgttcaaatatcatttctc 24095477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 26550305 - 26550237
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| | ||||||| |||||||||||| || || ||| |||||| ||||  ||||||||||||||    
T  26550305 taatgtgaatatgagagagaaagttgtcacaaaaattattaaaaaatggttgtgcaaatatcatttctc 26550237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 26996384 - 26996316
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||| ||| ||||| |||  |||||| |||  ||||||||||||||    
T  26996384 taatgtgagtatgagagagaaagttgttacaaaagttgttactaaatgaatgttcaaatatcatttctc 26996316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 27168685 - 27168753
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||| ||||| ||||||| |||||||||||| || || ||| |||||| ||||  ||||||||||||||    
T  27168685 taatatgagtatgagagagaaagttgtcacaaaaattattaaaaaatggttgttcaaatatcatttctc 27168753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 31017402 - 31017469
Alignment:
Q  36 gtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaa 104  Q
    |||||| ||||||| ||| |||||| | ||||| ||| |||||||||||  ||||||||||||||||||    
T  31017402 gtgagtatgagagagaaaattgtcaaa-aagttgttagaaaatgattgtacaaatatcatttctcaaaa 31017469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 32457759 - 32457830
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaa 104  Q
    |||||||||| ||||||| |||||||||||| ||||| | | ||| || ||||  ||||||||||||||||||    
T  32457759 taatgtgagtatgagagagaaagttgtcaca-aagttgtcaaaaagtggttgtacaaatatcatttctcaaaa 32457830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 40159842 - 40159909
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||||||||||| |||||||||| | ||||| ||| |||||  ||||  ||||||||||||||    
T  40159842 taatgtgagtctgagagagaaagttgtca-aaaagttgttagaaaatagttgtacaaatatcatttctc 40159909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 45293032 - 45293100
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| ||  |||||  ||||  ||||||||||||||    
T  45293032 taatgtgagtatgagagagaaagttgtcacaaaagttgtttaaaaatagttgtttaaatatcatttctc 45293100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 45693814 - 45693750
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatt 96  Q
    |||||||| | ||||||||||||||||||| ||| || | | |||||| ||||||| ||||||||    
T  45693814 taatgtgactatgagagataaagttgtcacctaaattgtcacaaaatggttgtcaagatatcatt 45693750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 48405478 - 48405410
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||| ||| ||||| | | |||||| ||||  ||||||||||||||    
T  48405478 taatgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatggttgtacaaatatcatttctc 48405410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 49021779 - 49021711
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||| | |||||||||||| ||||| ||| ||||||  |||  ||||||||||||||    
T  49021779 taatgtgagtatgagaaagaaagttgtcacaaaagttattaaaaaatggatgtacaaatatcatttctc 49021711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 49417643 - 49417575
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | |||||||   |||  ||||||||||||||    
T  49417643 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctc 49417575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 37516592 - 37516515
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaaa 109  Q
    |||||||||| ||||||||||| |||||| |||| || ||| |||||||||||||||||||||||||||  |||||||    
T  37516592 taatgtgagtatgagagataaaattgtcatataaattgttacaaaatgattgtcaaaatatcatttctcttaataaaa 37516515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 34254354 - 34254422
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| |||||||||||||||||||| ||||| | ||||||||| |||  ||||||||||||||    
T  34254354 taatgtgagtatgagagataaagttgtcacagaagttgtcataaaatgaatgttcaaatatcatttctc 34254422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 49660247 - 49660179
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| |||||||||||||||||||||| ||| | | |||||| |||| |||||||||||||||    
T  49660247 taatgtgagtatgagagataaagttgtcacataggttgtcacaaaatggttgttaaaatatcatttctc 49660179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 49931621 - 49931549
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaa 104  Q
    |||||||| | ||||||| |||||||||||| ||||| ||| |||||||||||  ||||||||||||||||||    
T  49931621 taatgtgaatatgagagagaaagttgtcacaaaagttgttaaaaaatgattgtacaaatatcatttctcaaaa 49931549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 33070668 - 33070602
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| ||| | ||||| |||||||||||||| | |||||||| ||||||||||||||||||||    
T  33070668 atgtgagtatgaaaaataaaattgtcacataagttgtcataaaatggttgtcaaaatatcatttctc 33070602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 30536059 - 30535991
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| || || ||| |||||||||||  ||||||||||||||    
T  30536059 taatgtgagtatgagagagaaagttgtcacaaaaattgttaaaaaatgattgtacaaatatcatttctc 30535991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 43560272 - 43560196
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaa 108  Q
    |||||||||| ||||||||||||||||||| ||  || | | |||||| |||| ||||||||||||||| |||||||    
T  43560272 taatgtgagtatgagagataaagttgtcacctagattgtcacaaaatggttgtgaaaatatcatttctctaaataaa 43560196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 47642610 - 47642680
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaa 102  Q
    |||||||||| ||||||| |||||||||||| ||||| | | |||||| ||||  ||||||||||||||||    
T  47642610 taatgtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctcaa 47642680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 15470060 - 15470129
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||||| |||||||||| | ||||| | | |||||| |||| ||||||||||||||||    
T  15470060 taatgtgagtatgagagagaaagttgtcaaaaaagttataaaaaaatggttgttaaaatatcatttctca 15470129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 23645478 - 23645410
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| |||||||||||||||||| | |||||  || |||||| ||||| |||||||||||||||    
T  23645478 taatgtgagtatgagagataaagttgtcaaaaaagtt-gtaaaaaatggttgtccaaatatcatttctca 23645410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 49020407 - 49020476
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||||| ||| |||||||| ||||| ||| |||||| ||||  |||||||||||||||    
T  49020407 taatgtgagtatgagagaaaaaattgtcacaaaagttgttaaaaaatggttgtacaaatatcatttctca 49020476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 649836 - 649768
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | | |||||| ||||  ||||||||||||||    
T  649836 taatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaaatggttgttcaaatatcatttctc 649768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 1689459 - 1689391
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| || || |||||||||  ||||  ||||||||||||||    
T  1689459 taatgtgagtatgagagagaaagttgtcacaaaaattgttataaaatagttgtacaaatatcatttctc 1689391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 9566964 - 9567032
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | | |||||| ||||  ||||||||||||||    
T  9566964 taatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 9567032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 10890049 - 10890117
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | ||||||||  |||  ||||||||||||||    
T  10890049 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctc 10890117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 11947863 - 11947795
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||| ||| ||||||| |||||||||||| ||||| | |||||||| ||||  ||||||||||||||    
T  11947863 taatgtcagtatgagagagaaagttgtcacaaaagttgtcataaaatggttgtacaaatatcatttctc 11947795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 13489730 - 13489662
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | ||||||||  |||  ||||||||||||||    
T  13489730 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctc 13489662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 15705065 - 15705133
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | ||||||||  |||  ||||||||||||||    
T  15705065 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctc 15705133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 21433404 - 21433472
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| | ||||| |||||||||||| ||||| ||| |||||| ||||  ||||||||||||||    
T  21433404 taatgtgagtataagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 21433472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 37619611 - 37619544
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | | |||||| ||||| ||||||||||||||    
T  37619611 taatgtgagtatgagagagaaagttgtcacaaaagttatca-aaaatggttgtccaaatatcatttctc 37619544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 51286370 - 51286438
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | ||||||| | |||  ||||||||||||||    
T  51286370 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaataaatgttcaaatatcatttctc 51286438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 52362550 - 52362482
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | ||||||||  |||  ||||||||||||||    
T  52362550 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctc 52362482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 4213139 - 4213072
Alignment:
Q  33 aatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    ||||||||| ||||||| |||||||||||| ||||| | | |||||| ||||  ||||||||||||||    
T  4213139 aatgtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctc 4213072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 5771751 - 5771822
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaa 103  Q
    |||||||||| ||||||| |||||||||||| || || | | ||| |||||||  |||||||||||||||||    
T  5771751 taatgtgagtatgagagagaaagttgtcacaaaaattatcaaaaagtgattgttcaaatatcatttctcaaa 5771822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 111
Target Start/End: Complemental strand, 29359706 - 29359628
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaaatg 111  Q
    |||||||||| ||||||| |||||||| ||| ||||| | | |||||||||||  ||||||||||| |||||||| ||||    
T  29359706 taatgtgagtatgagagagaaagttgttacaaaagttataa-aaaatgattgttcaaatatcatttttcaaaatataatg 29359628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 30745054 - 30744983
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgt-caaaatatcatttctcaa 102  Q
    |||| ||||| ||| ||| |||||||||||| ||||| ||| |||||| |||| ||||||||||||||||||    
T  30745054 taatatgagtatgatagagaaagttgtcacaaaagttattagaaaatggttgtacaaaatatcatttctcaa 30744983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 30766505 - 30766434
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgt-caaaatatcatttctcaa 102  Q
    |||| ||||| ||| ||| |||||||||||| ||||| ||| |||||| |||| ||||||||||||||||||    
T  30766505 taatatgagtatgatagagaaagttgtcacaaaagttattagaaaatggttgtacaaaatatcatttctcaa 30766434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 51436776 - 51436847
Alignment:
Q  33 aatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaa 104  Q
    ||||||||| |||||||||||||||||||| || || |   ||||| |||||  ||||||||||||||||||    
T  51436776 aatgtgagtatgagagataaagttgtcacaaaaattgtctcaaaattattgtgcaaatatcatttctcaaaa 51436847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 52714908 - 52714979
Alignment:
Q  36 gtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataa 107  Q
    |||||| ||||| | ||| |||||||| ||||| ||||||||||  |||  |||||||||||||||||||||    
T  52714908 gtgagtatgagaaagaaaattgtcacaaaagttgttataaaatggatgttcaaatatcatttctcaaaataa 52714979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 48983673 - 48983739
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| ||||||| |||||||||||| ||||| | | |||||| ||||  ||||||||||||||    
T  48983673 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 48983739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 2362423 - 2362355
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||| ||||| |||||||||||||||||||| ||||| | | ||| |||||||  |||||||||||||||    
T  2362423 taatatgagtatgagagataaagttgtcaca-aagttatcaaaaagtgattgtacaaatatcatttctca 2362355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 37685398 - 37685330
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||||| |||||||||||| |||||  || |||||| ||||  |||||||||||||||    
T  37685398 taatgtgagtatgagagagaaagttgtcacaaaagtt-gtaaaaaatggttgttcaaatatcatttctca 37685330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 37700120 - 37700188
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||||| |||||||||||| |||||  || |||||| ||||  |||||||||||||||    
T  37700120 taatgtgagtatgagagagaaagttgtcacaaaagtt-gtaaaaaatggttgttcaaatatcatttctca 37700188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 39712446 - 39712381
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcattt 97  Q
    |||||||| | |||| |||||||||||||||||  || | | |||||| |||||||||||||||||    
T  39712446 taatgtgaatatgagcgataaagttgtcacatagattatcacaaaatggttgtcaaaatatcattt 39712381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 42539474 - 42539441
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataa 65  Q
    |||||||||||||||||| |||||||||||||||    
T  42539474 taatgtgagtctgagagagaaagttgtcacataa 42539441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 7171239 - 7171275
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagtt 68  Q
    |||||||||| |||||||||||||||||||| |||||    
T  7171239 taatgtgagtatgagagataaagttgtcacaaaagtt 7171275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 12999826 - 12999893
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||| ||| ||||| ||| |||||| ||||  ||||||||||||||    
T  12999826 taatgtgagtatgagagagaaagttgt-acaaaagttgttagaaaatggttgtacaaatatcatttctc 12999893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 25702219 - 25702286
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| |||||||||||||||||  | ||||| ||| ||||| |||||  ||||||||||||||    
T  25702219 taatgtgagtatgagagataaagttgtc-tacaagttgttaaaaaataattgtagaaatatcatttctc 25702286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 32915075 - 32915143
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | |||||||   |||  ||||||||||||||    
T  32915075 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctc 32915143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 33076187 - 33076119
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||| ||| |||||||||| | ||||| ||| |||||| ||||  ||||||||||||||    
T  33076187 taatgtgagtatgatagagaaagttgtcataaaagttgttagaaaatggttgtacaaatatcatttctc 33076119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 35414594 - 35414661
Alignment:
Q  33 aatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    ||||||||| ||||||| | |||||||||  ||||| ||| |||||| |||||||||||||||| ||||    
T  35414594 aatgtgagtatgagagagagagttgtcaccaaagttgtta-aaaatggttgtcaaaatatcattcctca 35414661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 44672034 - 44672101
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| ||| |||||| | ||||| ||| |||||||||||  ||||||||||||||    
T  44672034 taatgtgagtatgagagagaaaattgtcaaa-aagttgttaaaaaatgattgtacaaatatcatttctc 44672101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 109
Target Start/End: Complemental strand, 46758397 - 46758369
Alignment:
Q  81 ttgtcaaaatatcatttctcaaaataaaa 109  Q
    |||||||||||||||||||||||||||||    
T  46758397 ttgtcaaaatatcatttctcaaaataaaa 46758369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 47214276 - 47214208
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | |||||||   |||  ||||||||||||||    
T  47214276 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctc 47214208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 48858891 - 48858823
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | | ||| || ||||  ||||||||||||||    
T  48858891 taatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttctc 48858823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 50239198 - 50239234
Alignment:
Q  74 aaaatgattgtcaaaatatcatttctcaaaataaaat 110  Q
    |||||| |||||||||||||||||||||||| |||||    
T  50239198 aaaatggttgtcaaaatatcatttctcaaaaaaaaat 50239234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 52437562 - 52437494
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| || || ||| |||||| ||||  | ||||||||||||    
T  52437562 taatgtgagtatgagagagaaagttgtcacaaaaattattaaaaaatggttgtatatatatcatttctc 52437494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 6524 - 6591
Alignment:
Q  33 aatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    ||||||||| |||||||||||||||||||| ||||| ||| |||||||||||  ||||||||||||||    
T  6524 aatgtgagtatgagagataaagttgtcacaaaagttgttaaaaaatgattgttcaaatatcatttctc 6591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 36123463 - 36123544
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaa-aataaaatgt 112  Q
    |||||| ||| ||||||| |||||||||| | ||||| |||||||||||||||  |||||||||||||||| ||||||||||    
T  36123463 taatgtaagtatgagagagaaagttgtcataaaagttgttataaaatgattgtacaaatatcatttctcaagaataaaatgt 36123544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 21025669 - 21025601
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    ||||||||||  |||||||||||||||||||||| || | | |||||| ||||||||||||||||||||    
T  21025669 taatgtgagtaagagagataaagttgtcacataaattgtcacaaaatggttgtcaaaatatcatttctc 21025601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 24509391 - 24509459
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||||||||||||||||||  || | | |||||| ||||||||||||||||||||    
T  24509391 taatgtgagtatgagagataaagttgtcacatagattgtcacaaaatggttgtcaaaatatcatttctc 24509459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 1795985 - 1796064
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaaatg 111  Q
    |||||||||| |||||||||||||| ||||| ||||| ||| |||||  ||||  ||||||||||||||| |||||||||    
T  1795985 taatgtgagtatgagagataaagttatcacaaaagttgttaaaaaattgttgtacaaatatcatttctcataataaaatg 1796064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 3078913 - 3078980
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||| ||||||| |||||||||||| ||||| ||| |||||||||||  |||||||||||||||    
T  3078913 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatgattgtacaaatatcatttctca 3078980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 46634167 - 46634098
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaa 102  Q
    |||||||||| |||||||||||||||||||| |||||  || |||||||||||  ||||||||||||||||    
T  46634167 taatgtgagtatgagagataaagttgtcacaaaagtt-gtaaaaaatgattgttcaaatatcatttctcaa 46634098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 39881034 - 39881102
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||||| |||||||||| | ||||| ||| |||||||||||  |||||||||||||||    
T  39881034 taatgtgagtatgagagagaaagttgtcaaa-aagttgttagaaaatgattgtacaaatatcatttctca 39881102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 34363621 - 34363553
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| |||||||||||||| ||||| ||||| |||||||||| | ||  | ||||||||||||    
T  34363621 taatgtgagtatgagagataaagttatcacaaaagttgttataaaatggtcgtacatatatcatttctc 34363553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 39158173 - 39158105
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| || || | | |||||||||||  ||||||||||||||    
T  39158173 taatgtgagtatgagagagaaagttgtcacaaaaattatcaaaaaatgattgttcaaatatcatttctc 39158105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 44257733 - 44257801
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| || || ||| ||||||||||   ||||||||||||||    
T  44257733 taatgtgagtatgagagagaaagttgtcacaaaaattgttagaaaatgattgcacaaatatcatttctc 44257801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 13139216 - 13139141
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataa 107  Q
    |||||||||| ||||||| |||||||||| | || || | ||||||||  |||  |||||||||||||||||||||    
T  13139216 taatgtgagtatgagagagaaagttgtcataaaaattatcataaaatggatgttcaaatatcatttctcaaaataa 13139141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 37514137 - 37514203
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| ||||||| |||||||||||| ||||| ||| ||||||  |||  ||||||||||||||    
T  37514137 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggatgtacaaatatcatttctc 37514203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 42815470 - 42815404
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| ||||||| |||||||||||| ||||| ||| |||||  ||||  ||||||||||||||    
T  42815470 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatagttgtacaaatatcatttctc 42815404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 51255812 - 51255746
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| ||||||| |||||||||||| ||||| | | |||||| ||||  ||||||||||||||    
T  51255812 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 51255746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 149488 - 149557
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||||| |||||||||||| || || | | ||| |||||||  |||||||||||||||    
T  149488 taatgtgagtatgagagagaaagttgtcacaaaaattatcaaaaagtgattgttcaaatatcatttctca 149557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 2401676 - 2401611
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttct 99  Q
    |||||||| |||||||||||||||||||| ||||| | | ||||||  |||  |||||||||||||    
T  2401676 atgtgagtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttct 2401611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 42916718 - 42916653
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcattt 97  Q
    |||||||||| ||||| | ||||||| |||| ||||| |||||||||| ||||  |||||||||||    
T  42916718 taatgtgagtatgagaaagaaagttgacacaaaagttgttataaaatggttgttcaaatatcattt 42916653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 53796723 - 53796659
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaa 103  Q
    |||||||||| | |||||||||||||||||||||||| |       || |||||||||||||||||||||||    
T  53796723 taatgtgagtataagagataaagttgtcacataagttgt-------tggttgtcaaaatatcatttctcaaa 53796659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 5249936 - 5249868
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| | ||| | |||||||| |||   ||||||||||||||    
T  5249936 taatgtgagtatgagagagaaagttgtcacaaatgttgtcataaaatggttgcacaaatatcatttctc 5249868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 5932767 - 5932835
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | | ||| || ||||  ||||||||||||||    
T  5932767 taatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttctc 5932835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 17363297 - 17363230
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||| | ||||| | ||||| |||||||  ||||||||||||||    
T  17363297 taatgtgagtatgagagagaaagttgtcaaa-aagttgtaataaagtgattgtacaaatatcatttctc 17363230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 41609683 - 41609750
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| |||||||||||||||| ||| ||||| | ||||||||  |||  ||||||||||||||    
T  41609683 taatgtgagtatgagagataaagttgt-acaaaagttgtcataaaatggatgtacaaatatcatttctc 41609750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 55609169 - 55609236
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| |||||  || |||||| ||||  ||||||||||||||    
T  55609169 taatgtgagtatgagagagaaagttgtcacaaaagtt-gtacaaaatggttgtacaaatatcatttctc 55609236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 33100472 - 33100540
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| |||||||||| ||||  ||||||||||||||    
T  33100472 taatgtgagtatgagagagaaagttgtcacaaaagttgttataaaatggttgttcaaatatcatttctc 33100540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 43285966 - 43286034
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| ||| |||||| ||||| ||||||||||||||    
T  43285966 taatgtgagtatgagagagaaagttgtcacaaaagttattagaaaatggttgtccaaatatcatttctc 43286034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 13884164 - 13884237
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaata 106  Q
    |||||||||| ||||||| |||||||||||| ||||| | | |||||||||||  ||||||||||||||||||||    
T  13884164 taatgtgagtatgagagagaaagttgtcaca-aagttgtcaaaaaatgattgtacaaatatcatttctcaaaata 13884237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 25830249 - 25830319
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaa 102  Q
    |||||||||| ||||||| |||||||||||| ||||| ||| |||||| ||||  ||||||||||||||||    
T  25830249 taatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctcaa 25830319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 7271919 - 7271851
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| |||||||||||||||||||| ||||| ||| ||||| |||||  |||||||||||||||    
T  7271919 taatgtgagtatgagagataaagttgtcacaaaagttgtta-aaaattattgttcaaatatcatttctca 7271851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 25987790 - 25987859
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| |||||||||||||||||||| ||||| | | |||||| ||||  |||||||||||||||    
T  25987790 taatgtgagtatgagagataaagttgtcacaaaagttgtaaaaaaatggttgttcaaatatcatttctca 25987859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 28756603 - 28756534
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||||||||| |||||||| || || ||||||||||||||   |||||||||||||||    
T  28756603 taatgtgagtatgagagataaaattgtcacaaaaattattataaaatgattgcacaaatatcatttctca 28756534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 39692363 - 39692302
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatc 93  Q
    |||||||| | |||||||||||||||||||||| ||| | | |||||| |||||||||||||    
T  39692363 taatgtgattatgagagataaagttgtcacataggttgtcacaaaatggttgtcaaaatatc 39692302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 67164 - 67232
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    ||||||| || ||||||| |||||||||||| ||||| ||| |||||| ||||  ||||||||||||||    
T  67164 taatgtgggtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 67232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 10692506 - 10692439
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| |||||||||||||||||||| || ||  || |||||||||||  ||||||||||||||    
T  10692506 taatgtgagtatgagagataaagttgtcacaaaaatt-ataaaaaatgattgttcaaatatcatttctc 10692439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 33451567 - 33451639
Alignment:
Q  33 aatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaat 105  Q
    ||||||||| ||||||| |||||||||||| ||||| | | |||||||||||  ||||||| || ||||||||    
T  33451567 aatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatcgttactcaaaat 33451639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 35067228 - 35067160
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| |||  ||||| ||||  ||||||||||||||    
T  35067228 taatgtgagtatgagagagaaagttgtcacaaaagttgttaagaaatggttgtacaaatatcatttctc 35067160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 35792125 - 35792069
Alignment:
Q  44 gagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||| |||||||||||| ||||| ||| |||||||||||  ||||||||||||||    
T  35792125 gagagagaaagttgtcacaaaagtttttaaaaaatgattgtacaaatatcatttctc 35792069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 43715942 - 43715875
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| ||| |||||| ||||  ||||||||||||||    
T  43715942 taatgtgagtatgagagagaaagttgtcacaaaagtt-ttagaaaatggttgtacaaatatcatttctc 43715875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 44061785 - 44061718
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttct 99  Q
    |||||||||| ||||||| |||||||||||| ||||| | | |||||| ||||  |||||||||||||    
T  44061785 taatgtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttct 44061718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 108
Target Start/End: Original strand, 1268793 - 1268854
Alignment:
Q  46 gagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaa 108  Q
    ||||||||||||| ||| ||||||||| |||||||||||  |||||||||||||  |||||||    
T  1268793 gagataaagttgt-acaaaagttcttacaaaatgattgtacaaatatcatttctataaataaa 1268854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 10644807 - 10644873
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||| | ||||||| |||||||||||| ||||| ||| |||||| ||||  ||||||||||||||    
T  10644807 atgtgattatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 10644873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 12707213 - 12707144
Alignment:
Q  36 gtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaat 105  Q
    |||||| ||||||| ||||||||| || ||||| | ||||||||  |||  |||||||||||||||||||    
T  12707213 gtgagtatgagagagaaagttgtcgcaaaagttgtcataaaatggatgttcaaatatcatttctcaaaat 12707144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 22960422 - 22960491
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaa 103  Q
    |||||||| ||||||||||| |||||||| || || |  ||||||| ||||  |||||||||||||||||    
T  22960422 atgtgagtatgagagataaaattgtcacagaaattatcctaaaatggttgtacaaatatcatttctcaaa 22960491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 23754710 - 23754779
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||| ||||| ||| ||| |||||||||||| ||||| ||| |||||| ||||  |||||||||||||||    
T  23754710 taatatgagtatgaaagagaaagttgtcacaaaagttattaaaaaatggttgttcaaatatcatttctca 23754779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 26026964 - 26026895
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||| | |||||||||||| ||||| | | |||||| ||||  |||||||||||||||    
T  26026964 taatgtgagtatgagaaagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctca 26026895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 33279552 - 33279617
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcattt 97  Q
    |||||| ||| |||||||||||||||||||| ||||| |||  ||||| ||||  |||||||||||    
T  33279552 taatgtaagtatgagagataaagttgtcacaaaagttgttaagaaatggttgtacaaatatcattt 33279617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 43397848 - 43397772
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaaa 109  Q
    |||||||||| ||||||| |||||||| ||| ||||| | | |||||| ||||  |||||||||||||||||| ||||    
T  43397848 taatgtgagtatgagagagaaagttgtaacaaaagttgtaa-aaaatggttgttcaaatatcatttctcaaaacaaaa 43397772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 2667704 - 2667772
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| | ||||| ||||| |||||| | ||||| ||||||| |||||||  ||||||||||||||    
T  2667704 taatgtgaatatgagaaataaaattgtcataaaagttgttataaattgattgtataaatatcatttctc 2667772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 4658266 - 4658334
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||| ||| ||||||| |||||||||||| ||||| | ||||||||  |||  ||||||||||||||    
T  4658266 taatgtaagtatgagagaaaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctc 4658334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 7598776 - 7598708
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| ||||| |||||| ||||| | | |||||| ||||  ||||||||||||||    
T  7598776 taatgtgagtatgagagagaaagtggtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 7598708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 8410347 - 8410415
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| | || ||||||||||||||  ||| | | |||||||||||||  ||||||||||||||    
T  8410347 taatgtgagtgtaagggataaagttgtcacgaaagctgtcataaaatgattgtacaaatatcatttctc 8410415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 9550411 - 9550478
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||| | ||||| ||| ||||||||||   ||||||||||||||    
T  9550411 taatgtgagtatgagagagaaagttgtcaaa-aagttgttagaaaatgattggacaaatatcatttctc 9550478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 10592295 - 10592351
Alignment:
Q  43 tgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttct 99  Q
    ||||||| |||||||||||| ||||| | | ||||||||||| || |||||||||||    
T  10592295 tgagagagaaagttgtcacaaaagttatcaaaaaatgattgtaaagatatcatttct 10592351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 27325823 - 27325756
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaa 102  Q
    |||||||| ||||||| |||||||||||| |||||  || |||||| ||||  ||||||||||||||||    
T  27325823 atgtgagtatgagagagaaagttgtcacaaaagtt-gtaaaaaatggttgttcaaatatcatttctcaa 27325756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 37449429 - 37449496
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| |||||  || |||||| ||||  ||||||||||||||    
T  37449429 taatgtgagtatgagagaaaaagttgtcacaaaagtt-gtaaaaaatggttgttgaaatatcatttctc 37449496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 9742383 - 9742461
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca-aaataaaa 109  Q
    |||||||||| |||||||| ||||||||| |||| || | | |||||| ||||||||||||||||||||| ||||||||    
T  9742383 taatgtgagtatgagagatgaagttgtcagataacttgtcacaaaatggttgtcaaaatatcatttctcataaataaaa 9742461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 38293362 - 38293432
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaa 102  Q
    |||||||||| ||| ||| |||||||||||| || || |||||||||| |||| |||||||||||||||||    
T  38293362 taatgtgagtatgatagagaaagttgtcacaaaaattgttataaaatggttgtaaaaatatcatttctcaa 38293432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 189706 - 189783
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaaa 109  Q
    |||||||||| ||||||| |||||||||||| ||||| | ||||||||  |||  |||||||||||||| ||||||||    
T  189706 taatgtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaatatcatttctctaaataaaa 189783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 22098323 - 22098254
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||||| |||||||||||| ||||| ||| |||||| ||||  |||||||||||||||    
T  22098323 taatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctca 22098254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 27546131 - 27546063
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||| |||||||||||||| || || | |||||||||||||  ||||||||||||||    
T  27546131 taatgtgagtatgagaaataaagttgtcacaaaatttgtcataaaatgattgttcaaatatcatttctc 27546063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 35075579 - 35075647
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| ||||||||||||| |||| | | |||||||||||  ||||||||||||||    
T  35075579 taatgtgagtatgagagaaaaagttgtcacatcagttgtcaaaaaatgattgttcaaatatcatttctc 35075647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 6940155 - 6940221
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| ||||||| |||||||||||| || || |||||||||| ||||  ||||||||||||||    
T  6940155 atgtgagtatgagagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttctc 6940221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 18695384 - 18695318
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| ||||||| |||||||||||| ||||| ||| |||||| ||||  ||||||||||||||    
T  18695384 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 18695318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 4088511 - 4088438
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaat 105  Q
    |||||||||| ||| ||| |||||||||||| ||||| ||||||||||  |||  |||||||||||||| ||||    
T  4088511 taatgtgagtatgaaagagaaagttgtcacaaaagttgttataaaatggatgtacaaatatcatttctctaaat 4088438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 6517780 - 6517711
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||||| |||||||||||| ||||| | ||||||||  |||  |||||||||||||||    
T  6517780 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctca 6517711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 28306136 - 28306204
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| |||||||||||||||||||| |||||  || |||||| ||||  |||||||||||||||    
T  28306136 taatgtgagtatgagagataaagttgtcacaaaagtt-gtaaaaaatggttgttcaaatatcatttctca 28306204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 1764290 - 1764223
Alignment:
Q  33 aatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    ||||||||| ||||||| |||||||||||| |||||  || |||||||||||  |||||||||||||||    
T  1764290 aatgtgagtatgagagagaaagttgtcacagaagtt-gtaaaaaatgattgttcaaatatcatttctca 1764223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 12779610 - 12779685
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaa 108  Q
    |||||||||| |||||||||||||||||| | ||||| | | ||| || ||||  ||||||||||||||||||||||    
T  12779610 taatgtgagtatgagagataaagttgtca-aaaagttgtcacaaattggttgtacaaatatcatttctcaaaataaa 12779685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 19481185 - 19481253
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | ||||||||  |||  ||||||||||||||    
T  19481185 taatgtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaatatcatttctc 19481253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 19839989 - 19840057
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| || || | ||||||||| |||  ||||||||||||||    
T  19839989 taatgtgagtatgagagagaaagttgtcacaaaaattgtcataaaatgaatgttcaaatatcatttctc 19840057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 31708437 - 31708367
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaa 103  Q
    |||| ||||| ||||||| |||||||||| | ||||| |||||||||| ||||  |||||||||||||||||    
T  31708437 taatatgagtatgagagagaaagttgtcaaa-aagttgttataaaatggttgtacaaatatcatttctcaaa 31708367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 16690567 - 16690497
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaa 102  Q
    |||||||||| ||| ||| |||||||||||| ||||| |||  ||||| ||||  ||||||||||||||||    
T  16690567 taatgtgagtatgaaagagaaagttgtcacaaaagttgttaagaaatggttgtacaaatatcatttctcaa 16690497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 14011366 - 14011317
Alignment:
Q  51 aaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||||| ||||| ||| |||||||||||  ||||||||||||||    
T  14011366 aaagttgtcacaaaagttgttacaaaatgattgttcaaatatcatttctc 14011317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 40829482 - 40829413
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||||| ||| |||||||| || || ||| |||||| ||||  |||||||||||||||    
T  40829482 taatgtgagtatgagagaaaaaattgtcacaaaaattattaaaaaatggttgtacaaatatcatttctca 40829413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 611932 - 611864
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| | | ||| | |||||  ||||||||||||||    
T  611932 taatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtaattgttcaaatatcatttctc 611864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 884509 - 884441
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| |||||||||||||||||||| || || |||  | |||| |||  ||||||||||||||    
T  884509 taatgtgagtatgagagataaagttgtcacaaaatttattaggagatgaatgtacaaatatcatttctc 884441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 1274425 - 1274358
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||| |||||||||||||||| ||||| | | |||||| ||||  ||||||||||||||    
T  1274425 taatgtgagtatgaaagataaagttgtcacaaaagttgtca-aaaatggttgttcaaatatcatttctc 1274358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 10659088 - 10659144
Alignment:
Q  44 gagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    ||||||||||||||||||| ||||| ||| ||||| | |||  ||||||||||||||    
T  10659088 gagagataaagttgtcacaaaagttattaaaaaattaatgttcaaatatcatttctc 10659144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 11148579 - 11148511
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| || ||||||||| ||||| | | ||| |||||||  ||||||||||||||    
T  11148579 taatgtgagtatgagagagaatgttgtcacaaaagttgtcaaaaattgattgtacaaatatcatttctc 11148511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 12718384 - 12718459
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaa 108  Q
    |||||||| | |||||||||||||||||| | ||||| | | ||| || ||||  ||||||||||||||||||||||    
T  12718384 taatgtgaatatgagagataaagttgtcaaa-aagttgtcacaaattggttgtacaaatatcatttctcaaaataaa 12718459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 13089785 - 13089853
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||| ||| |||||||||||| ||||| | | |||||| ||||  ||||||||||||||    
T  13089785 taatgtgagtatgaaagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 13089853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 18638829 - 18638896
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||||||| |||||| | ||||| | |||||||| ||||  ||||||||||||||    
T  18638829 taatgtgagtatgagagataaatttgtca-aaaagttgtaataaaatggttgtgcaaatatcatttctc 18638896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 26686949 - 26686881
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| | ||||||| |||||||||||| || || ||| ||||| |||||  ||||||||||||||    
T  26686949 taatgtgaatatgagagagaaagttgtcacaaaaattattaaaaaataattgtataaatatcatttctc 26686881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 26956680 - 26956612
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| | ||||||| |||||||||||| || || ||| ||||| |||||  ||||||||||||||    
T  26956680 taatgtgaatatgagagagaaagttgtcacaaaaattattaaaaaataattgtataaatatcatttctc 26956612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 32912106 - 32912038
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| ||| |||||||| || || | ||||||||| |||  ||||||||||||||    
T  32912106 taatgtgagtatgagagagaaaattgtcacaaaaattatcataaaatgaatgttcaaatatcatttctc 32912038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0416 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 6926 - 6861
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcattt 97  Q
    |||||||||| ||||||||||||||||||||||  || | | |||||| |||||||||||||||||    
T  6926 taatgtgagtatgagagataaagttgtcacatagattgtcacaaaatggttgtcaaaatatcattt 6861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 10833649 - 10833718
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||||||||| ||||||||||  || | | |||||| |||||||||||||||||||||    
T  10833649 taatgtgagtatgagagataaaattgtcacatagattgtcacaaaatggttgtcaaaatatcatttctca 10833718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 6999071 - 6999143
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaa 104  Q
    |||||||||| ||||||| |||||||||||| ||||| | ||||||||  |||  ||||||||||||||||||    
T  6999071 taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctcaaaa 6999143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 24766220 - 24766152
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| || ||||||||||||||||| ||||| ||| |||||| ||||  ||||||||||||||    
T  24766220 taatgtgagtatgcgagataaagttgtcacaaaagttattaaaaaatggttgtacaaatatcatttctc 24766152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 9048405 - 9048474
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||| | |||||||||||||||| |||||  || | | |||||| |||||||||||||||||||||    
T  9048405 taatgtgaatatgagagataaagttgttacatagattatcacaaaatggttgtcaaaatatcatttctca 9048474  T

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Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 12784406 - 12784471
Alignment:
Q  36 gtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||| ||||||| |||||||||||| || || |||||||||| ||||  |||||||||||||||    
T  12784406 gtgagtatgagagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttctca 12784471  T

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Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 30973995 - 30974068
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaataaa 108  Q
    |||||||||| ||||||| |  ||||||| | ||||| | ||||||||||||| |||||||||||||||||||||||    
T  30973995 taatgtgagtatgagagaga--gttgtcaaa-aagttgtcataaaatgattgtaaaaatatcatttctcaaaataaa 30974068  T

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Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 6170694 - 6170626
Alignment:
Q  36 gtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaa 104  Q
    |||||| ||||||| |||||||||||| ||||| | ||||||||  |||  ||||||||||||||||||    
T  6170694 gtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttgaaatatcatttctcaaaa 6170626  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 6336320 - 6336252
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||| ||||| ||||||| |||||||||||| ||||| ||| |||||| ||||  ||||||||||||||    
T  6336320 taatatgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 6336252  T

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Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 9207657 - 9207590
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| |||||  || |||||||||||  ||||||||||||||    
T  9207657 taatgtgagtatgagagagaaagttgtcacaaaagtt-gtaaaaaatgattgttcaaatatcatttctc 9207590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 13711370 - 13711438
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| | ||||||||||||||||||| || ||| | | ||||||  |||||||||||||||||||    
T  13711370 taatgtgaatatgagagataaagttgtcacgtaggttgtcacaaaatgggtgtcaaaatatcatttctc 13711438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 41042321 - 41042254
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| ||| |||||| ||||  ||||||||||||||    
T  41042321 taatgtgagtatgagagaaaaagttgtcacaaaagttgtta-aaaatggttgttcaaatatcatttctc 41042254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 42532742 - 42532810
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||| | |||||||||||| ||||| |||||||||| || | ||| |||||||||||    
T  42532742 taatgtgagtatgagaaagaaagttgtcacaaaagttattataaaatggttataaaattatcatttctc 42532810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 34134776 - 34134843
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||| ||| ||||||| |||||||||| | ||||| ||| |||||| |||| ||||||||||||||||    
T  34134776 atgtcagtatgagagagaaagttgtcagaaaagttgttacaaaatggttgtaaaaatatcatttctca 34134843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 43057132 - 43057053
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc-aaaataaaat 110  Q
    |||||||||| | ||||| |||||||||||| ||||| ||| ||| || ||||  |||||||||||||| ||||||||||    
T  43057132 taatgtgagtataagagagaaagttgtcacaaaagttgttaaaaagtggttgttcaaatatcatttctctaaaataaaat 43057053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 5031989 - 5031923
Alignment:
Q  34 atgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| ||||||| ||||||||| || ||||| ||| |||||| ||||  ||||||||||||||    
T  5031989 atgtgagtatgagagagaaagttgtcgcaaaagttgttacaaaatggttgtacaaatatcatttctc 5031923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 3771438 - 3771370
Alignment:
Q  33 aatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    ||||||| | |||||||||||||  ||||| || || ||| |||||||||||  |||||||||||||||    
T  3771438 aatgtgactatgagagataaagtcatcacaaaaattattaaaaaatgattgtacaaatatcatttctca 3771370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 7497995 - 7498062
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||| | ||||| | |||||||| ||||  ||||||||||||||    
T  7497995 taatgtgagtatgagagagaaagttgtcaaa-aagttgtaataaaatggttgtacaaatatcatttctc 7498062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 9634439 - 9634507
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| || || | ||||||||  |||  ||||||||||||||    
T  9634439 taatgtgagtatgagagaaaaagttgtcacaaaaattatcataaaatggatgttcaaatatcatttctc 9634507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 14328449 - 14328381
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| ||||| ||| |||||  ||||  | ||||||||||||    
T  14328449 taatgtgagtatgagagaaaaagttgtcacaaaagttgttagaaaattgttgtacatatatcatttctc 14328381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 18254213 - 18254280
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||||| |||||  || |||||| ||||  ||||||||||||||    
T  18254213 taatgtgagtatgagagagaaagttgtcacaaaagtt-gtaaaaaatggttgttcaaatatcatttctc 18254280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 22888825 - 22888896
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaa 104  Q
    |||||||||| ||||||| |||||||||||| || || | | |||||| ||||  ||||||||||||||||||    
T  22888825 taatgtgagtatgagagagaaagttgtcacaaaaattgtca-aaaatggttgttcaaatatcatttctcaaaa 22888896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 31635814 - 31635881
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||| | ||||| ||| |||||| ||||  ||||||||||||||    
T  31635814 taatgtgagtatgagagagaaagttgtcaaa-aagttgttagaaaatggttgtacaaatatcatttctc 31635881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 35334584 - 35334516
Alignment:
Q  36 gtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctcaaaa 104  Q
    |||||| ||||||| | | |||| ||| ||||| |||||||||| ||||  ||||||||||||||||||    
T  35334584 gtgagtatgagagaaagaattgttacaaaagttattataaaatggttgtacaaatatcatttctcaaaa 35334516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 38560746 - 38560678
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||| | | |||||||| ||| ||||| ||| ||||||| ||| |||||||||||||||    
T  38560746 taatgtgagtatgacaaagaaagttgtaacaaaagttgttacaaaatgaatgttaaaatatcatttctc 38560678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 42665816 - 42665883
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| |||||||||| | ||||| | ||||| |||||||  ||||||||||||||    
T  42665816 taatgtgagtatgagagagaaagttgtcaaa-aagttgtaataaagtgattgtacaaatatcatttctc 42665883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 44050083 - 44050015
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||||| ||||||| || ||||||||| ||||| | |||||||| ||||  || |||||||||||    
T  44050083 taatgtgagtatgagagagaaggttgtcacaaaagttgtcataaaatggttgtacaagtatcatttctc 44050015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 6884 - 6816
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    |||||||||| ||||||| |||||||||| | ||||| | ||||| |||||||| |||||||||||||||    
T  6884 taatgtgagtatgagagagaaagttgtcaaa-aagttgtcataaattgattgtccaaatatcatttctca 6816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 8539 - 8471
Alignment:
Q  33 aatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctca 101  Q
    ||||||||| ||||||| |||||||||| | || || ||| |||||||||||  |||||||||||||||    
T  8539 aatgtgagtatgagagagaaagttgtcataaaaattgttaaaaaatgattgttcaaatatcatttctca 8471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 16791 - 16843
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgt 84  Q
    |||||||||| ||||||| |||||||||||| | ||| ||| |||||||||||    
T  16791 taatgtgagtatgagagagaaagttgtcacaaatgttgttaaaaaatgattgt 16843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 56053 - 56001
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgt 84  Q
    |||||||||| ||||||| |||||||||||| | ||| ||| |||||||||||    
T  56053 taatgtgagtatgagagagaaagttgtcacaaatgttgttaaaaaatgattgt 56001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 366361 - 366294
Alignment:
Q  32 taatgtgagtctgagagataaagttgtcacataagttcttataaaatgattgtcaaaatatcatttctc 100  Q
    |||||||| | ||||||| |||||||||||| ||||| ||| |||||| ||||  ||||||||||||||    
T  366361 taatgtgaatatgagagagaaagttgtcacaaaagttgtta-aaaatggttgtacaaatatcatttctc 366294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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