View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16817_high_73 (Length: 228)

Name: NF16817_high_73
Description: NF16817
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16817_high_73
NF16817_high_73
[»] chr8 (20 HSPs)
chr8 (60-213)||(25826069-25826222)
chr8 (62-213)||(25408113-25408264)
chr8 (60-213)||(25688569-25688722)
chr8 (65-213)||(25667712-25667860)
chr8 (60-213)||(25331423-25331576)
chr8 (60-213)||(25470200-25470353)
chr8 (60-213)||(25486232-25486385)
chr8 (60-213)||(25635657-25635810)
chr8 (60-213)||(24890077-24890230)
chr8 (60-213)||(25711208-25711361)
chr8 (64-208)||(25687469-25687613)
chr8 (60-213)||(25428643-25428796)
chr8 (60-213)||(25501382-25501535)
chr8 (65-213)||(25380043-25380194)
chr8 (116-213)||(25731031-25731128)
chr8 (114-213)||(25599608-25599707)
chr8 (128-213)||(24916860-24916945)
chr8 (119-209)||(23262322-23262412)
chr8 (128-213)||(25433799-25433884)
chr8 (112-213)||(22880419-22880520)
[»] scaffold0070 (2 HSPs)
scaffold0070 (60-213)||(40941-41097)
scaffold0070 (116-213)||(25307-25404)
[»] chr4 (1 HSPs)
chr4 (60-213)||(10332330-10332483)
[»] scaffold0746 (1 HSPs)
scaffold0746 (116-213)||(4470-4567)
[»] chr1 (1 HSPs)
chr1 (112-209)||(23394063-23394163)


Alignment Details
Target: chr8 (Bit Score: 109; Significance: 6e-55; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25826222 - 25826069
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||    
T  25826222 taaggaaaaatggtgaatctatcatcttgtctcttactttttttgctatcattgcattgttttgtggcttgcttagttgcgaatccaaaaaccatcacaa 25826123  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  25826122 ctgatcaatctgctcttctagcattcaaatcactaattacttcagacccctatg 25826069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 62 - 213
Target Start/End: Complemental strand, 25408264 - 25408113
Alignment:
Q  62 aggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaact 161  Q
    |||||||||||||||||||| ||||||||||||||       ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  25408264 aggaaaaatggtgaatctattatcttgtctcttactttttttgctatcattgcattgttttgtggcttgcttagctgtgaatacaaaaaacatcacaaca 25408165  T
Q  162 gatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    |||||||||||||||||| ||||||||||| | |||||||||||||| ||||    
T  25408164 gatcaatctgctcttctagcattcaaatccctcattacttcagacccttatg 25408113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25688722 - 25688569
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||||||| ||||||||||||||       | |||||||||| | ||||||||||||||||||||||||||| |||||||||||||    
T  25688722 taaggaaaaatggtgaatctattatcttgtctcttacttgttttgttatcattgcactattttgtggcttgcttagctgcgaatacgaaaaacatcacaa 25688623  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    | |||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  25688622 cggatcaatctgctcttctagcattcaaatctttaattacttcagacccctatg 25688569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 25667860 - 25667712
Alignment:
Q  65 aaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaactgat 164  Q
    ||||||||||||||||| |||| |||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  25667860 aaaaatggtgaatctattatctcgtctcttactttttttgctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaacagat 25667761  T
Q  165 caatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    |||||||| |||||| ||||||||||  |||||||||||||||||||||    
T  25667760 caatctgcacttctagcattcaaatcactaattacttcagacccctatg 25667712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25331576 - 25331423
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||||||| |||| ||||||||        |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25331576 taaggaaaaatggtgaatctattatctcgtctcttattttttttgctatcattgcattgttttgtggcttgcttagctacgaatacaaaaaacatcacaa 25331477  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    | |||||||||||||||||| |||| |||||| | |||||||||||||||||||    
T  25331476 cagatcaatctgctcttctagcatttaaatccctcattacttcagacccctatg 25331423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25470353 - 25470200
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||||||| ||||||| ||||||       ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25470353 taaggaaaaatggtgaatctattatcttgtatcttactttttttgctatcattgcattgttttgtggcttgcttagctgtgaatacaaaaaacatcacaa 25470254  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    | ||||||| |||||||||| ||||||||||| | |||||||||||||| ||||    
T  25470253 cagatcaatatgctcttctagcattcaaatccctcattacttcagacccttatg 25470200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25486385 - 25486232
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||| ||| ||||||||||||||       | ||||||||||||||||||| |||||||||||| ||||||||||||||| |||||    
T  25486385 taaggaaaaatggtgaatatattatcttgtctcttactttttttgttatcattgcattgttttgtagcttgcttagcttcgaatacaaaaaacagcacaa 25486286  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    |||||||||| |||||| || |||||||||| ||||||||||||||||||||||    
T  25486285 ctgatcaatccgctcttatagcattcaaatctttaattacttcagacccctatg 25486232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25635810 - 25635657
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    ||||||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||    
T  25635810 taaggaaaaatggtgaatctatcatcttgcctcttactttttttgctatcattgcattgttttgtggctagcttagctacgtatacaaaaaacatcacaa 25635711  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    | ||||||| |||||| ||| ||||||||||  |||||||||||||||||||||    
T  25635710 cagatcaatatgctctcctagcattcaaatcactaattacttcagacccctatg 25635657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 24890077 - 24890230
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||| ||| |||| |||||||||       | |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24890077 taaggaaaaatggtgaatgtattatctcgtctcttactttttttgatatcattgcattgttttgtggcttgcttagctacgaatacaaaaaacatcacaa 24890176  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||||||| | ||| || ||||||||||  |||||||||||||||||||||    
T  24890177 ctgatcaatcttcacttttagcattcaaatcactaattacttcagacccctatg 24890230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25711361 - 25711208
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||||||| |||| || ||||||        |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25711361 taaggaaaaatggtgaatctattatctcgtttcttacttttttctctatcattgcattgttatgtggcttgcttagctgcgaatacaaaaaacatcacaa 25711262  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||||  |||||||||| ||||||||||  |||||||||||||||| ||||    
T  25711261 ctgatcaacatgctcttctagcattcaaatcactaattacttcagacccttatg 25711208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 64 - 208
Target Start/End: Complemental strand, 25687613 - 25687469
Alignment:
Q  64 gaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaactga 163  Q
    ||||||||||||||||||||||| |||| ||||       ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25687613 gaaaaatggtgaatctatcatctcgtctattactttttttgctatcactgcattgttttgtggcttgcttagctgtgaatacaaaaaacatcacaactga 25687514  T
Q  164 tcaatctgctcttctatcattcaaatccttaattacttcagaccc 208  Q
    |||||||||||| ||| | ||||||||| | ||||||||||||||    
T  25687513 tcaatctgctctactagctttcaaatccctgattacttcagaccc 25687469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25428796 - 25428643
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||| ||| |||| |||||||||       | |||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  25428796 taaggaaaaatggtgaatgtattatctcgtctcttactttttttgatatcattgcattgttttgtggcttgcttagctaccaatacaaaaaacatcacaa 25428697  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    |||| |||||||| ||| || ||||||||||  |||||||||||||||||||||    
T  25428696 ctgaccaatctgcccttttagcattcaaatcactaattacttcagacccctatg 25428643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25501535 - 25501382
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||| ||||||||||||| ||| |||| |||||||||       | |||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  25501535 taagaaaaaatggtgaatgtattatctcgtctcttactttttttgatatcattgcattgttttgtggcttgcttagctaccaatacaaaaaacatcacaa 25501436  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||||||| | ||| || ||||||||||  |||||||||||||||||||||    
T  25501435 ctgatcaatcttcacttttagcattcaaatcactaattacttcagacccctatg 25501382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 25380194 - 25380043
Alignment:
Q  65 aaaaatggtgaatctatcatcttgtctcttacnnnnnnn---gctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaact 161  Q
    ||||||||||||||||| ||||||||||||||          | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25380194 aaaaatggtgaatctattatcttgtctcttactaattgttttgttatcattgcattgttttgtggcttgcttagctgcgaatataaaaaacatcacaact 25380095  T
Q  162 gatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||  || ||||||| ||||||||||| | |||||||||||||| ||||    
T  25380094 gatcaacatgttcttctagcattcaaatccctgattacttcagacccatatg 25380043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 25731128 - 25731031
Alignment:
Q  116 ttgttttgtggcttgcttagctgcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||| ||||    
T  25731128 ttgttttattgcttgcttagctgcaaatacaaaaaacatcacaactgatcaatctgctcttctagctttcaaatccctaattacttcagacccttatg 25731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 213
Target Start/End: Complemental strand, 25599707 - 25599608
Alignment:
Q  114 cattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||| |||| || ||||||| || ||||||||||| |||||||||||||||||||||    
T  25599707 cattgttttgtgtcttgcttaactgcgaatacaaaaaacatcacaacagatctatatgctcttatagcattcaaatccctaattacttcagacccctatg 25599608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 24916860 - 24916945
Alignment:
Q  128 ttgcttagctgcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||| || | ||||||||| |||||||||||||||||||||    
T  24916860 ttgcttaactgcgaatacaaaaaacatcacaacagatcaatctgctcttatagctttcaaatccctaattacttcagacccctatg 24916945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 23262412 - 23262322
Alignment:
Q  119 ttttgtggcttgcttagctgcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagacccc 209  Q
    ||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||| ||||||||| | |||||||||| ||||||    
T  23262412 ttttgtggcttgctttgctgcaaatacaaaaaacatcaccacagatcaatctgctcttctagcattcaaattcctaattacttcggacccc 23262322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 25433884 - 25433799
Alignment:
Q  128 ttgcttagctgcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    |||||||||||| ||||||||||||||||| |||||||||| |||||||||| ||||||||||  |||||||||||||||| ||||    
T  25433884 ttgcttagctgcaaatacaaaaaacatcaccactgatcaatatgctcttctagcattcaaatctctaattacttcagacccttatg 25433799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 22880419 - 22880520
Alignment:
Q  112 tgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagaccccta 211  Q
    |||||||||| || |||||||||||| | ||||||||||||||||| || ||| ||| |||||||||| ||||||||||  | ||||||||||| |||||    
T  22880419 tgcattgtttcgttgcttgcttagcttcaaatacaaaaaacatcactacagataaatatgctcttctagcattcaaatcacttattacttcagatcccta 22880518  T
Q  212 tg 213  Q
    ||    
T  22880519 tg 22880520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 40941 - 41097
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnn---gctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatca 156  Q
    |||| ||||||||||||||||| ||||||||||||||          | |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  40941 taagaaaaaatggtgaatctattatcttgtctcttactaattgttttgttatcattgcattgttttgtgacttgctttgctgcgaatacgaaaaacatca 41040  T
Q  157 caactgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  41041 caactgatcaatctgctcttctagcatttaaatctttaattacttcagacccctatg 41097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 25307 - 25404
Alignment:
Q  116 ttgttttgtggcttgcttagctgcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  25307 ttgttttattgcttgcttagctgcaaatacaaaaaacatcacaactgatcaatctgctcttctagcattcaaatccctaattacttcagacccttatg 25404  T

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Target: chr4 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 10332483 - 10332330
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||||||| ||||  ||||||||       |||| |||||||||||||| |||||||||||||| | ||| || ||||||||||||    
T  10332483 taaggaaaaatggtgaatctattatctcatctcttactttttttgctaccattgcattgttttatggcttgcttagcttcaaattcagaaaacatcacaa 10332384  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    | ||||||||||| |||||| ||||||||||  |||||||||||||||||||||    
T  10332383 cagatcaatctgcacttctagcattcaaatcactaattacttcagacccctatg 10332330  T

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Target: scaffold0746 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 4567 - 4470
Alignment:
Q  116 ttgttttgtggcttgcttagctgcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  4567 ttgttttattgcttgcttagctgcaaatacaaaaaacatcacaactgatcaatctgctcttctagcattcaaatccctaattacttcagacccttatg 4470  T

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Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 23394063 - 23394163
Alignment:
Q  112 tgcattgttttgtggcttgcttagct---gcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagaccc 208  Q
    |||||||||| ||||||| |||||||   || ||| | ||||||||| | || |||||||||||||||||  ||||||||||| | ||||||||||||||    
T  23394063 tgcattgtttcgtggcttacttagctcatgccaatgccaaaaacatctccacagatcaatctgctcttctcgcattcaaatccctcattacttcagaccc 23394162  T
Q  209 c 209  Q
    |    
T  23394163 c 23394163  T

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