View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16817_low_75 (Length: 228)

Name: NF16817_low_75
Description: NF16817
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16817_low_75
NF16817_low_75
[»] chr8 (20 HSPs)
chr8 (60-213)||(25826069-25826222)
chr8 (62-213)||(25408113-25408264)
chr8 (60-213)||(25688569-25688722)
chr8 (65-213)||(25667712-25667860)
chr8 (60-213)||(25331423-25331576)
chr8 (60-213)||(25470200-25470353)
chr8 (60-213)||(25486232-25486385)
chr8 (60-213)||(25635657-25635810)
chr8 (60-213)||(24890077-24890230)
chr8 (60-213)||(25711208-25711361)
chr8 (64-208)||(25687469-25687613)
chr8 (60-213)||(25428643-25428796)
chr8 (60-213)||(25501382-25501535)
chr8 (65-213)||(25380043-25380194)
chr8 (116-213)||(25731031-25731128)
chr8 (114-213)||(25599608-25599707)
chr8 (128-213)||(24916860-24916945)
chr8 (119-209)||(23262322-23262412)
chr8 (128-213)||(25433799-25433884)
chr8 (112-213)||(22880419-22880520)
[»] scaffold0070 (2 HSPs)
scaffold0070 (60-213)||(40941-41097)
scaffold0070 (116-213)||(25307-25404)
[»] chr4 (1 HSPs)
chr4 (60-213)||(10332330-10332483)
[»] scaffold0746 (1 HSPs)
scaffold0746 (116-213)||(4470-4567)
[»] chr1 (1 HSPs)
chr1 (112-209)||(23394063-23394163)


Alignment Details
Target: chr8 (Bit Score: 109; Significance: 6e-55; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25826222 - 25826069
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||    
T  25826222 taaggaaaaatggtgaatctatcatcttgtctcttactttttttgctatcattgcattgttttgtggcttgcttagttgcgaatccaaaaaccatcacaa 25826123  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  25826122 ctgatcaatctgctcttctagcattcaaatcactaattacttcagacccctatg 25826069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 62 - 213
Target Start/End: Complemental strand, 25408264 - 25408113
Alignment:
Q  62 aggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaact 161  Q
    |||||||||||||||||||| ||||||||||||||       ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  25408264 aggaaaaatggtgaatctattatcttgtctcttactttttttgctatcattgcattgttttgtggcttgcttagctgtgaatacaaaaaacatcacaaca 25408165  T
Q  162 gatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    |||||||||||||||||| ||||||||||| | |||||||||||||| ||||    
T  25408164 gatcaatctgctcttctagcattcaaatccctcattacttcagacccttatg 25408113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25688722 - 25688569
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||||||| ||||||||||||||       | |||||||||| | ||||||||||||||||||||||||||| |||||||||||||    
T  25688722 taaggaaaaatggtgaatctattatcttgtctcttacttgttttgttatcattgcactattttgtggcttgcttagctgcgaatacgaaaaacatcacaa 25688623  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    | |||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  25688622 cggatcaatctgctcttctagcattcaaatctttaattacttcagacccctatg 25688569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 25667860 - 25667712
Alignment:
Q  65 aaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaactgat 164  Q
    ||||||||||||||||| |||| |||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  25667860 aaaaatggtgaatctattatctcgtctcttactttttttgctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaacagat 25667761  T
Q  165 caatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    |||||||| |||||| ||||||||||  |||||||||||||||||||||    
T  25667760 caatctgcacttctagcattcaaatcactaattacttcagacccctatg 25667712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25331576 - 25331423
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||||||| |||| ||||||||        |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25331576 taaggaaaaatggtgaatctattatctcgtctcttattttttttgctatcattgcattgttttgtggcttgcttagctacgaatacaaaaaacatcacaa 25331477  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    | |||||||||||||||||| |||| |||||| | |||||||||||||||||||    
T  25331476 cagatcaatctgctcttctagcatttaaatccctcattacttcagacccctatg 25331423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25470353 - 25470200
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||||||| ||||||| ||||||       ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25470353 taaggaaaaatggtgaatctattatcttgtatcttactttttttgctatcattgcattgttttgtggcttgcttagctgtgaatacaaaaaacatcacaa 25470254  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    | ||||||| |||||||||| ||||||||||| | |||||||||||||| ||||    
T  25470253 cagatcaatatgctcttctagcattcaaatccctcattacttcagacccttatg 25470200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25486385 - 25486232
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||| ||| ||||||||||||||       | ||||||||||||||||||| |||||||||||| ||||||||||||||| |||||    
T  25486385 taaggaaaaatggtgaatatattatcttgtctcttactttttttgttatcattgcattgttttgtagcttgcttagcttcgaatacaaaaaacagcacaa 25486286  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    |||||||||| |||||| || |||||||||| ||||||||||||||||||||||    
T  25486285 ctgatcaatccgctcttatagcattcaaatctttaattacttcagacccctatg 25486232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25635810 - 25635657
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    ||||||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||    
T  25635810 taaggaaaaatggtgaatctatcatcttgcctcttactttttttgctatcattgcattgttttgtggctagcttagctacgtatacaaaaaacatcacaa 25635711  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    | ||||||| |||||| ||| ||||||||||  |||||||||||||||||||||    
T  25635710 cagatcaatatgctctcctagcattcaaatcactaattacttcagacccctatg 25635657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 24890077 - 24890230
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||| ||| |||| |||||||||       | |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24890077 taaggaaaaatggtgaatgtattatctcgtctcttactttttttgatatcattgcattgttttgtggcttgcttagctacgaatacaaaaaacatcacaa 24890176  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||||||| | ||| || ||||||||||  |||||||||||||||||||||    
T  24890177 ctgatcaatcttcacttttagcattcaaatcactaattacttcagacccctatg 24890230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25711361 - 25711208
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||||||| |||| || ||||||        |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25711361 taaggaaaaatggtgaatctattatctcgtttcttacttttttctctatcattgcattgttatgtggcttgcttagctgcgaatacaaaaaacatcacaa 25711262  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||||  |||||||||| ||||||||||  |||||||||||||||| ||||    
T  25711261 ctgatcaacatgctcttctagcattcaaatcactaattacttcagacccttatg 25711208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 64 - 208
Target Start/End: Complemental strand, 25687613 - 25687469
Alignment:
Q  64 gaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaactga 163  Q
    ||||||||||||||||||||||| |||| ||||       ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25687613 gaaaaatggtgaatctatcatctcgtctattactttttttgctatcactgcattgttttgtggcttgcttagctgtgaatacaaaaaacatcacaactga 25687514  T
Q  164 tcaatctgctcttctatcattcaaatccttaattacttcagaccc 208  Q
    |||||||||||| ||| | ||||||||| | ||||||||||||||    
T  25687513 tcaatctgctctactagctttcaaatccctgattacttcagaccc 25687469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25428796 - 25428643
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||| ||| |||| |||||||||       | |||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  25428796 taaggaaaaatggtgaatgtattatctcgtctcttactttttttgatatcattgcattgttttgtggcttgcttagctaccaatacaaaaaacatcacaa 25428697  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    |||| |||||||| ||| || ||||||||||  |||||||||||||||||||||    
T  25428696 ctgaccaatctgcccttttagcattcaaatcactaattacttcagacccctatg 25428643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 25501535 - 25501382
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||| ||||||||||||| ||| |||| |||||||||       | |||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  25501535 taagaaaaaatggtgaatgtattatctcgtctcttactttttttgatatcattgcattgttttgtggcttgcttagctaccaatacaaaaaacatcacaa 25501436  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||||||| | ||| || ||||||||||  |||||||||||||||||||||    
T  25501435 ctgatcaatcttcacttttagcattcaaatcactaattacttcagacccctatg 25501382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 25380194 - 25380043
Alignment:
Q  65 aaaaatggtgaatctatcatcttgtctcttacnnnnnnn---gctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaact 161  Q
    ||||||||||||||||| ||||||||||||||          | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25380194 aaaaatggtgaatctattatcttgtctcttactaattgttttgttatcattgcattgttttgtggcttgcttagctgcgaatataaaaaacatcacaact 25380095  T
Q  162 gatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||  || ||||||| ||||||||||| | |||||||||||||| ||||    
T  25380094 gatcaacatgttcttctagcattcaaatccctgattacttcagacccatatg 25380043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 25731128 - 25731031
Alignment:
Q  116 ttgttttgtggcttgcttagctgcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||| ||||    
T  25731128 ttgttttattgcttgcttagctgcaaatacaaaaaacatcacaactgatcaatctgctcttctagctttcaaatccctaattacttcagacccttatg 25731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 213
Target Start/End: Complemental strand, 25599707 - 25599608
Alignment:
Q  114 cattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||| |||| || ||||||| || ||||||||||| |||||||||||||||||||||    
T  25599707 cattgttttgtgtcttgcttaactgcgaatacaaaaaacatcacaacagatctatatgctcttatagcattcaaatccctaattacttcagacccctatg 25599608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 24916860 - 24916945
Alignment:
Q  128 ttgcttagctgcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||| || | ||||||||| |||||||||||||||||||||    
T  24916860 ttgcttaactgcgaatacaaaaaacatcacaacagatcaatctgctcttatagctttcaaatccctaattacttcagacccctatg 24916945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 23262412 - 23262322
Alignment:
Q  119 ttttgtggcttgcttagctgcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagacccc 209  Q
    ||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||| ||||||||| | |||||||||| ||||||    
T  23262412 ttttgtggcttgctttgctgcaaatacaaaaaacatcaccacagatcaatctgctcttctagcattcaaattcctaattacttcggacccc 23262322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 25433884 - 25433799
Alignment:
Q  128 ttgcttagctgcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    |||||||||||| ||||||||||||||||| |||||||||| |||||||||| ||||||||||  |||||||||||||||| ||||    
T  25433884 ttgcttagctgcaaatacaaaaaacatcaccactgatcaatatgctcttctagcattcaaatctctaattacttcagacccttatg 25433799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 22880419 - 22880520
Alignment:
Q  112 tgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagaccccta 211  Q
    |||||||||| || |||||||||||| | ||||||||||||||||| || ||| ||| |||||||||| ||||||||||  | ||||||||||| |||||    
T  22880419 tgcattgtttcgttgcttgcttagcttcaaatacaaaaaacatcactacagataaatatgctcttctagcattcaaatcacttattacttcagatcccta 22880518  T
Q  212 tg 213  Q
    ||    
T  22880519 tg 22880520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 40941 - 41097
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnn---gctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatca 156  Q
    |||| ||||||||||||||||| ||||||||||||||          | |||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  40941 taagaaaaaatggtgaatctattatcttgtctcttactaattgttttgttatcattgcattgttttgtgacttgctttgctgcgaatacgaaaaacatca 41040  T
Q  157 caactgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  41041 caactgatcaatctgctcttctagcatttaaatctttaattacttcagacccctatg 41097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 25307 - 25404
Alignment:
Q  116 ttgttttgtggcttgcttagctgcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  25307 ttgttttattgcttgcttagctgcaaatacaaaaaacatcacaactgatcaatctgctcttctagcattcaaatccctaattacttcagacccttatg 25404  T

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Target: chr4 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 10332483 - 10332330
Alignment:
Q  60 taaggaaaaatggtgaatctatcatcttgtctcttacnnnnnnngctatcattgcattgttttgtggcttgcttagctgcgaatacaaaaaacatcacaa 159  Q
    |||||||||||||||||||||| ||||  ||||||||       |||| |||||||||||||| |||||||||||||| | ||| || ||||||||||||    
T  10332483 taaggaaaaatggtgaatctattatctcatctcttactttttttgctaccattgcattgttttatggcttgcttagcttcaaattcagaaaacatcacaa 10332384  T
Q  160 ctgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    | ||||||||||| |||||| ||||||||||  |||||||||||||||||||||    
T  10332383 cagatcaatctgcacttctagcattcaaatcactaattacttcagacccctatg 10332330  T

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Target: scaffold0746 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 4567 - 4470
Alignment:
Q  116 ttgttttgtggcttgcttagctgcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagacccctatg 213  Q
    ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  4567 ttgttttattgcttgcttagctgcaaatacaaaaaacatcacaactgatcaatctgctcttctagcattcaaatccctaattacttcagacccttatg 4470  T

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Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 23394063 - 23394163
Alignment:
Q  112 tgcattgttttgtggcttgcttagct---gcgaatacaaaaaacatcacaactgatcaatctgctcttctatcattcaaatccttaattacttcagaccc 208  Q
    |||||||||| ||||||| |||||||   || ||| | ||||||||| | || |||||||||||||||||  ||||||||||| | ||||||||||||||    
T  23394063 tgcattgtttcgtggcttacttagctcatgccaatgccaaaaacatctccacagatcaatctgctcttctcgcattcaaatccctcattacttcagaccc 23394162  T
Q  209 c 209  Q
    |    
T  23394163 c 23394163  T

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