View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16817_low_77 (Length: 224)
Name: NF16817_low_77
Description: NF16817
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16817_low_77 |
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Alignment Details
Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 34 - 168
Target Start/End: Original strand, 1151435 - 1151567
Alignment:
| Q |
34 |
agacccaatttaaaaagctattgttcatgaacgacttgcacatgatattgttcattatacgcatactctctgccaagtaagaaagctcgtcggttcattc |
133 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||| |
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| T |
1151435 |
agacccaatttaaaaagctattgttcatgaacgacttgcacaggatattgttcatttcacgca-actctctgccaagtaag-aagctcgtcggttcattc |
1151532 |
T |
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| Q |
134 |
aagtcaatctataggttttaattccaattataaaa |
168 |
Q |
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|||||||| |||||||||||||||||||||||||| |
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| T |
1151533 |
aagtcaatatataggttttaattccaattataaaa |
1151567 |
T |
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