View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16818_high_15 (Length: 304)
Name: NF16818_high_15
Description: NF16818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16818_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 10 - 292
Target Start/End: Complemental strand, 34053765 - 34053482
Alignment:
| Q |
10 |
ataatactgtccaactccatctattatgaatcagtttgaataactcaaacttgtccaaaaatacttataggataagaaatactaaaagaacctcgcaaca |
109 |
Q |
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| T |
34053765 |
ataatactgtccaactccatctattatgaatcagtttgaataactcaaacttgtccaaaaatacttataggataagaaatactaaaagaaccttgcaaca |
34053666 |
T |
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| Q |
110 |
gttgagtttttcatacaagtagaaattagctcatacatctaattttatttctagaaactctcatttaacttctctatgaacacctataaaggattcattc |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34053665 |
gttgagtttttcatacaagtagaaattagctcatacatctaattttatttctagaaactctcatttaacttctctatgaacacctataaaggattcattc |
34053566 |
T |
|
| Q |
210 |
gtaagcgaacaccccataaacttctttaattgagaggtttctaaagtcagaaactaatctaaa-ttgccctgagaataaaatga |
292 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |
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| T |
34053565 |
gtaagcgaacaccccataaacttctttaattgagaggtttctaaagtcagaaactaatctaaactagccctgagaataaaatga |
34053482 |
T |
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