View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16818_high_23 (Length: 248)
Name: NF16818_high_23
Description: NF16818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16818_high_23 |
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Alignment Details
Target: chr6 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 32343785 - 32344020
Alignment:
| Q |
3 |
actttatacaaatatgcaccatatacgcatgcatttatatagtagtttgcatgcatgagaaaatgagcactgaatattcaaatatcaaaatctnnnnnnn |
102 |
Q |
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| T |
32343785 |
actttatacaaatatgcaccatatacgcatgcatttatatagtagtttgcatgcatgagaaaatgagcactgaatattcaaatatcaaaatgtaaaaaaa |
32343884 |
T |
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| Q |
103 |
taaattgaaatatttaatgtccaattgtaggggttaggtttaattgctaccacatacaccacacaatttaccttctcttaccattatagtccagctctat |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |
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| T |
32343885 |
taaattgaaatatttaatgtccaattgtaggggttaggtttaattgctaccacatacaccacacaatttaccttctcttaccataatagtctagctctat |
32343984 |
T |
|
| Q |
203 |
cacatgcatggtatgtgaaggtacattcgcattcat |
238 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
32343985 |
cacatgcatggtatgtgaaggtacattcgcattcat |
32344020 |
T |
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