View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16818_high_24 (Length: 233)
Name: NF16818_high_24
Description: NF16818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16818_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 39453360 - 39453158
Alignment:
| Q |
18 |
ataccagggaaagtcatcaccctcaataagggtgtgattttgaacctttattaattatatcattaaaggcccccttcatgaatgaataatgagagaagag |
117 |
Q |
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| T |
39453360 |
ataccagggaaagtcatcaccctcaataagggtgtgattttgaacctttattaattatatcattaaaggcccccttcatgaatgaataatgagagaagag |
39453261 |
T |
|
| Q |
118 |
gaattcatcaagtccctcctcgaaccaaccaccactgaaactccatatggtttccgtctccgaaccagttttcagcaccaatccccaatccgctgctctc |
217 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |
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| T |
39453260 |
gaattcatcaattccctcctcgaaccaaccaccactgaaactccatatggtttccgtctccgaaccagttttgagcaccagtccccaatccgctgctctc |
39453161 |
T |
|
| Q |
218 |
tgc |
220 |
Q |
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||| |
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|
| T |
39453160 |
tgc |
39453158 |
T |
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