View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16818_low_3 (Length: 596)

Name: NF16818_low_3
Description: NF16818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16818_low_3
NF16818_low_3
[»] chr1 (62 HSPs)
chr1 (234-581)||(931239-931600)
chr1 (276-448)||(41958083-41958253)
chr1 (287-448)||(26980283-26980444)
chr1 (294-448)||(6133653-6133806)
chr1 (288-430)||(33193066-33193208)
chr1 (279-448)||(44271916-44272085)
chr1 (294-427)||(37552977-37553110)
chr1 (288-454)||(25543332-25543497)
chr1 (288-445)||(8899015-8899172)
chr1 (299-399)||(8741256-8741356)
chr1 (288-436)||(11987636-11987784)
chr1 (288-430)||(41948168-41948310)
chr1 (301-448)||(2225224-2225369)
chr1 (308-415)||(37525560-37525667)
chr1 (288-446)||(19101623-19101781)
chr1 (291-401)||(31866361-31866470)
chr1 (274-383)||(45179254-45179363)
chr1 (299-416)||(51732307-51732424)
chr1 (288-436)||(27570235-27570383)
chr1 (279-422)||(29673499-29673642)
chr1 (288-445)||(10659791-10659948)
chr1 (290-383)||(30678935-30679028)
chr1 (287-422)||(32211805-32211940)
chr1 (281-368)||(47644310-47644399)
chr1 (299-436)||(28218081-28218218)
chr1 (313-410)||(50539160-50539257)
chr1 (30-80)||(11385953-11386003)
chr1 (300-410)||(15468256-15468366)
chr1 (314-435)||(743430-743551)
chr1 (288-446)||(22540368-22540522)
chr1 (31-80)||(31975460-31975509)
chr1 (15-80)||(50154430-50154495)
chr1 (279-446)||(3872649-3872813)
chr1 (341-445)||(41095684-41095788)
chr1 (32-80)||(47895308-47895356)
chr1 (198-248)||(931647-931700)
chr1 (341-448)||(11135737-11135844)
chr1 (377-448)||(13388332-13388403)
chr1 (341-448)||(32848658-32848765)
chr1 (306-361)||(33059933-33059988)
chr1 (33-79)||(7190560-7190606)
chr1 (388-450)||(39039477-39039539)
chr1 (295-332)||(33114002-33114039)
chr1 (287-444)||(35336868-35337019)
chr1 (341-418)||(36566924-36567001)
chr1 (341-446)||(41917995-41918100)
chr1 (294-422)||(15928579-15928707)
chr1 (288-380)||(33114037-33114129)
chr1 (341-448)||(11430439-11430546)
chr1 (321-416)||(24911493-24911588)
chr1 (319-422)||(49730888-49730991)
chr1 (354-417)||(50773199-50773262)
chr1 (34-80)||(932241-932287)
chr1 (288-403)||(1093091-1093210)
chr1 (27-77)||(52396412-52396462)
chr1 (31-80)||(6170635-6170684)
chr1 (391-448)||(11430568-11430625)
chr1 (299-328)||(27794272-27794301)
chr1 (299-332)||(39974233-39974266)
chr1 (147-183)||(932135-932171)
chr1 (367-435)||(28274797-28274865)
chr1 (147-191)||(34874659-34874703)
[»] chr6 (35 HSPs)
chr6 (288-445)||(34905337-34905494)
chr6 (276-436)||(31116134-31116294)
chr6 (291-446)||(10133183-10133338)
chr6 (287-448)||(445816-445977)
chr6 (288-436)||(5106308-5106456)
chr6 (290-417)||(17144695-17144822)
chr6 (279-436)||(2675905-2676062)
chr6 (287-448)||(12753781-12753942)
chr6 (288-399)||(32112739-32112850)
chr6 (290-449)||(20128798-20128954)
chr6 (290-449)||(22203916-22204072)
chr6 (292-446)||(13001692-13001846)
chr6 (288-446)||(21987292-21987450)
chr6 (279-445)||(32122796-32122962)
chr6 (299-446)||(1392630-1392774)
chr6 (299-411)||(16852006-16852118)
chr6 (391-447)||(19737431-19737487)
chr6 (288-403)||(32598970-32599085)
chr6 (30-80)||(32786041-32786091)
chr6 (279-334)||(34882241-34882298)
chr6 (341-443)||(35128798-35128900)
chr6 (315-448)||(31443957-31444090)
chr6 (388-448)||(8441959-8442019)
chr6 (388-448)||(8450763-8450823)
chr6 (388-448)||(12690250-12690310)
chr6 (288-404)||(12780781-12780897)
chr6 (29-80)||(16437669-16437720)
chr6 (341-448)||(19090290-19090397)
chr6 (294-352)||(16187460-16187518)
chr6 (294-352)||(16187678-16187736)
chr6 (391-448)||(19090210-19090267)
chr6 (28-80)||(5578244-5578296)
chr6 (288-352)||(8441871-8441935)
chr6 (288-352)||(8450675-8450739)
chr6 (354-422)||(12327293-12327361)
[»] chr2 (46 HSPs)
chr2 (288-451)||(6980142-6980305)
chr2 (288-448)||(26767783-26767943)
chr2 (288-451)||(38464158-38464321)
chr2 (294-445)||(9470082-9470233)
chr2 (281-445)||(3804585-3804750)
chr2 (288-448)||(12989189-12989349)
chr2 (291-448)||(36471863-36472020)
chr2 (312-448)||(18511255-18511391)
chr2 (289-448)||(11539421-11539583)
chr2 (294-436)||(24497202-24497344)
chr2 (288-433)||(10981531-10981676)
chr2 (289-436)||(30718350-30718496)
chr2 (288-446)||(45554567-45554717)
chr2 (293-445)||(44274236-44274387)
chr2 (278-445)||(7919280-7919447)
chr2 (297-445)||(16719461-16719609)
chr2 (290-361)||(472187-472258)
chr2 (341-448)||(15508912-15509019)
chr2 (295-446)||(34142168-34142319)
chr2 (338-448)||(1110196-1110306)
chr2 (294-432)||(19639107-19639245)
chr2 (294-432)||(19837700-19837838)
chr2 (291-448)||(28898061-28898219)
chr2 (299-448)||(32856168-32856321)
chr2 (294-352)||(12098894-12098953)
chr2 (341-446)||(42182889-42182994)
chr2 (32-80)||(11445406-11445454)
chr2 (297-429)||(25730470-25730602)
chr2 (299-399)||(27494484-27494584)
chr2 (388-448)||(37398809-37398869)
chr2 (299-407)||(43414394-43414502)
chr2 (374-448)||(2476534-2476606)
chr2 (301-351)||(4552875-4552925)
chr2 (301-403)||(35316436-35316538)
chr2 (375-448)||(33678224-33678297)
chr2 (29-80)||(2966511-2966562)
chr2 (341-448)||(4964748-4964855)
chr2 (29-80)||(6999173-6999224)
chr2 (377-448)||(42183003-42183074)
chr2 (313-451)||(45270603-45270740)
chr2 (303-383)||(25238314-25238395)
chr2 (147-188)||(27495215-27495256)
chr2 (391-448)||(44274361-44274418)
chr2 (147-187)||(4023358-4023398)
chr2 (389-445)||(19953521-19953577)
chr2 (291-399)||(30849284-30849392)
[»] chr7 (52 HSPs)
chr7 (274-448)||(12263444-12263618)
chr7 (279-448)||(31502479-31502646)
chr7 (288-436)||(27949283-27949431)
chr7 (288-446)||(14795131-14795289)
chr7 (288-446)||(15242123-15242281)
chr7 (288-448)||(22189937-22190097)
chr7 (294-448)||(32205077-32205228)
chr7 (290-448)||(27888280-27888438)
chr7 (288-436)||(6442175-6442323)
chr7 (294-445)||(11824072-11824223)
chr7 (298-448)||(33008102-33008252)
chr7 (291-436)||(7459353-7459498)
chr7 (294-446)||(46517293-46517443)
chr7 (288-445)||(39254084-39254241)
chr7 (299-446)||(32212903-32213049)
chr7 (288-416)||(11692209-11692337)
chr7 (288-447)||(48374461-48374618)
chr7 (288-427)||(7775019-7775157)
chr7 (279-336)||(12167317-12167374)
chr7 (292-351)||(10933991-10934050)
chr7 (288-357)||(6580024-6580093)
chr7 (299-399)||(25686868-25686968)
chr7 (341-448)||(17354602-17354709)
chr7 (29-80)||(29034658-29034709)
chr7 (288-446)||(32178826-32178981)
chr7 (29-80)||(42222192-42222243)
chr7 (311-361)||(36845567-36845617)
chr7 (374-446)||(19422942-19423014)
chr7 (345-448)||(8073367-8073470)
chr7 (299-429)||(44350835-44350965)
chr7 (307-372)||(3855851-3855916)
chr7 (289-417)||(17749723-17749852)
chr7 (289-445)||(24539145-24539302)
chr7 (341-445)||(13919781-13919885)
chr7 (344-436)||(44511014-44511106)
chr7 (374-448)||(26703548-26703620)
chr7 (287-334)||(32943838-32943885)
chr7 (405-448)||(42863573-42863616)
chr7 (288-334)||(7774956-7775002)
chr7 (279-333)||(31874129-31874183)
chr7 (34-80)||(49069531-49069577)
chr7 (391-448)||(2520631-2520688)
chr7 (391-448)||(27888409-27888466)
chr7 (395-448)||(30742664-30742717)
chr7 (288-329)||(31628116-31628157)
chr7 (30-79)||(36279094-36279143)
chr7 (291-336)||(36845516-36845561)
chr7 (391-448)||(37549622-37549679)
chr7 (341-449)||(22786148-22786256)
chr7 (393-445)||(34281052-34281104)
chr7 (391-435)||(43930085-43930129)
chr7 (391-443)||(45909584-45909636)
[»] chr4 (55 HSPs)
chr4 (288-446)||(43771126-43771284)
chr4 (292-445)||(24834579-24834732)
chr4 (288-448)||(50164393-50164553)
chr4 (288-445)||(8108957-8109114)
chr4 (288-448)||(39471155-39471315)
chr4 (288-404)||(22542423-22542539)
chr4 (279-448)||(33653502-33653671)
chr4 (281-448)||(20225356-20225521)
chr4 (288-435)||(722168-722315)
chr4 (288-435)||(754602-754749)
chr4 (288-436)||(49242180-49242328)
chr4 (313-448)||(49769851-49769986)
chr4 (287-409)||(24938436-24938558)
chr4 (288-448)||(26361330-26361482)
chr4 (325-448)||(50571862-50571985)
chr4 (310-448)||(49077247-49077385)
chr4 (288-441)||(20454545-20454696)
chr4 (288-399)||(52671877-52671988)
chr4 (299-453)||(45081775-45081929)
chr4 (299-448)||(34129433-34129582)
chr4 (322-436)||(46242000-46242112)
chr4 (306-441)||(48339380-48339515)
chr4 (299-428)||(25719145-25719275)
chr4 (288-438)||(19937194-19937343)
chr4 (341-445)||(39016664-39016768)
chr4 (288-448)||(40991611-40991771)
chr4 (357-445)||(43958152-43958240)
chr4 (297-445)||(10169676-10169822)
chr4 (288-433)||(47009202-47009347)
chr4 (288-436)||(33995957-33996105)
chr4 (33-80)||(10100200-10100247)
chr4 (341-448)||(13069939-13070045)
chr4 (341-448)||(42862496-42862603)
chr4 (288-403)||(43124536-43124651)
chr4 (388-446)||(46287441-46287499)
chr4 (288-416)||(19447161-19447290)
chr4 (289-438)||(29699497-29699645)
chr4 (392-448)||(13070069-13070125)
chr4 (341-449)||(47237816-47237924)
chr4 (288-380)||(52279281-52279373)
chr4 (302-349)||(11895134-11895181)
chr4 (307-398)||(31250924-31251015)
chr4 (294-333)||(34961762-34961801)
chr4 (33-80)||(40436056-40436103)
chr4 (29-80)||(45688714-45688765)
chr4 (29-80)||(47188752-47188803)
chr4 (305-408)||(50481584-50481687)
chr4 (33-80)||(50514700-50514747)
chr4 (29-69)||(15986237-15986277)
chr4 (288-332)||(19933498-19933542)
chr4 (388-432)||(22592318-22592362)
chr4 (388-448)||(33787992-33788052)
chr4 (299-351)||(37451046-37451098)
chr4 (393-445)||(39016793-39016845)
chr4 (389-445)||(40925787-40925843)
[»] chr3 (55 HSPs)
chr3 (288-448)||(28529251-28529409)
chr3 (288-448)||(20493467-20493627)
chr3 (288-448)||(46450065-46450224)
chr3 (288-448)||(41451917-41452077)
chr3 (288-448)||(52123978-52124138)
chr3 (288-453)||(24734698-24734863)
chr3 (288-436)||(8825001-8825149)
chr3 (288-448)||(37776725-37776885)
chr3 (288-410)||(18427172-18427294)
chr3 (319-431)||(26310499-26310611)
chr3 (276-448)||(55452025-55452195)
chr3 (288-448)||(29755498-29755658)
chr3 (288-440)||(41707462-41707613)
chr3 (289-448)||(46160947-46161104)
chr3 (287-448)||(46575946-46576108)
chr3 (288-448)||(5452084-5452242)
chr3 (288-444)||(27243047-27243204)
chr3 (299-439)||(22604567-22604707)
chr3 (288-402)||(29588755-29588869)
chr3 (293-434)||(38414659-38414800)
chr3 (294-437)||(10948588-10948731)
chr3 (287-445)||(41387564-41387720)
chr3 (288-446)||(20791296-20791454)
chr3 (288-436)||(50156682-50156828)
chr3 (299-448)||(48351434-48351583)
chr3 (293-448)||(15790397-15790551)
chr3 (309-445)||(13809083-13809219)
chr3 (279-371)||(24429038-24429131)
chr3 (31-80)||(32415542-32415591)
chr3 (288-336)||(2419486-2419534)
chr3 (297-445)||(40715893-40716041)
chr3 (276-436)||(50661529-50661692)
chr3 (377-448)||(10769720-10769791)
chr3 (297-348)||(38138613-38138664)
chr3 (341-435)||(40702197-40702289)
chr3 (299-345)||(742057-742103)
chr3 (299-345)||(752493-752539)
chr3 (294-432)||(45515525-45515661)
chr3 (279-416)||(138793-138930)
chr3 (300-401)||(20586885-20586986)
chr3 (299-411)||(19345033-19345145)
chr3 (343-446)||(30624633-30624734)
chr3 (377-436)||(24748917-24748976)
chr3 (288-359)||(29388616-29388687)
chr3 (29-80)||(36730240-36730291)
chr3 (33-80)||(46317461-46317508)
chr3 (29-80)||(51817399-51817450)
chr3 (34-80)||(8715588-8715634)
chr3 (34-80)||(9067475-9067521)
chr3 (354-448)||(37600218-37600312)
chr3 (354-436)||(46237134-46237216)
chr3 (147-184)||(10854955-10854992)
chr3 (377-446)||(38928006-38928075)
chr3 (376-445)||(55283167-55283236)
chr3 (388-436)||(13639412-13639460)
[»] chr8 (47 HSPs)
chr8 (288-448)||(1977195-1977355)
chr8 (276-448)||(8914769-8914941)
chr8 (288-448)||(16983392-16983552)
chr8 (288-448)||(35151751-35151911)
chr8 (279-445)||(32072098-32072264)
chr8 (288-445)||(9952779-9952936)
chr8 (281-448)||(43506536-43506698)
chr8 (287-422)||(36804860-36804995)
chr8 (291-422)||(17499258-17499389)
chr8 (299-446)||(28413902-28414049)
chr8 (289-445)||(6387564-6387719)
chr8 (299-448)||(34861225-34861367)
chr8 (288-449)||(5979877-5980037)
chr8 (302-446)||(8903852-8903996)
chr8 (288-399)||(13214542-13214653)
chr8 (288-438)||(17915824-17915970)
chr8 (279-403)||(35797438-35797560)
chr8 (288-436)||(24055947-24056095)
chr8 (281-380)||(35819198-35819295)
chr8 (288-417)||(13407345-13407475)
chr8 (320-436)||(17716863-17716977)
chr8 (288-351)||(7493364-7493427)
chr8 (281-406)||(9453502-9453628)
chr8 (344-448)||(31301113-31301217)
chr8 (288-435)||(11962704-11962850)
chr8 (377-448)||(13856506-13856577)
chr8 (281-436)||(41727440-41727595)
chr8 (319-401)||(3099695-3099777)
chr8 (354-448)||(7599510-7599604)
chr8 (288-352)||(6098799-6098863)
chr8 (291-423)||(17741552-17741684)
chr8 (392-447)||(31691637-31691692)
chr8 (409-448)||(34952459-34952498)
chr8 (341-436)||(35689490-35689585)
chr8 (391-445)||(5095759-5095813)
chr8 (294-332)||(5095788-5095826)
chr8 (287-333)||(14236451-14236497)
chr8 (388-433)||(7493469-7493514)
chr8 (288-365)||(10651846-10651923)
chr8 (274-366)||(10654113-10654203)
chr8 (343-416)||(10868021-10868094)
chr8 (370-427)||(16314379-16314436)
chr8 (378-442)||(12212126-12212190)
chr8 (378-442)||(12456554-12456618)
chr8 (156-192)||(12956213-12956249)
chr8 (392-436)||(36804847-36804891)
chr8 (147-183)||(44353225-44353261)
[»] chr5 (39 HSPs)
chr5 (279-433)||(17537115-17537269)
chr5 (306-448)||(34368358-34368500)
chr5 (288-448)||(28490744-28490904)
chr5 (294-448)||(37455347-37455500)
chr5 (279-446)||(10141989-10142154)
chr5 (288-432)||(34384713-34384857)
chr5 (294-445)||(28223804-28223955)
chr5 (290-422)||(41105594-41105726)
chr5 (299-403)||(5413770-5413874)
chr5 (304-448)||(39246606-39246750)
chr5 (294-408)||(10950124-10950238)
chr5 (341-413)||(28155775-28155847)
chr5 (341-448)||(4959276-4959383)
chr5 (288-403)||(41330415-41330530)
chr5 (288-446)||(30325896-30326054)
chr5 (279-416)||(28090242-28090379)
chr5 (294-422)||(28434846-28434972)
chr5 (287-351)||(25710493-25710557)
chr5 (290-448)||(28611802-28611960)
chr5 (287-448)||(43405391-43405552)
chr5 (370-446)||(32050414-32050490)
chr5 (279-327)||(38607164-38607212)
chr5 (305-408)||(4877792-4877895)
chr5 (341-448)||(42224666-42224773)
chr5 (31-77)||(25568382-25568428)
chr5 (378-448)||(26072218-26072288)
chr5 (27-80)||(34546747-34546800)
chr5 (306-446)||(27592492-27592632)
chr5 (389-448)||(32309478-32309537)
chr5 (29-80)||(35653342-35653393)
chr5 (395-446)||(36494223-36494274)
chr5 (303-416)||(13456201-13456315)
chr5 (293-383)||(14553575-14553665)
chr5 (290-328)||(26227005-26227043)
chr5 (313-399)||(36337937-36338023)
chr5 (391-448)||(4959406-4959463)
chr5 (295-368)||(25919289-25919362)
chr5 (313-398)||(31885878-31885963)
chr5 (36-80)||(4838259-4838303)
[»] scaffold0018 (1 HSPs)
scaffold0018 (288-400)||(27858-27970)
[»] scaffold0543 (1 HSPs)
scaffold0543 (309-422)||(9688-9801)
[»] scaffold0492 (1 HSPs)
scaffold0492 (309-422)||(11234-11347)
[»] scaffold0204 (1 HSPs)
scaffold0204 (306-417)||(26902-27013)
[»] scaffold0062 (3 HSPs)
scaffold0062 (30-80)||(16858-16908)
scaffold0062 (30-80)||(27026-27076)
scaffold0062 (30-80)||(37192-37242)
[»] scaffold0016 (1 HSPs)
scaffold0016 (391-451)||(204701-204761)


Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 234 - 581
Target Start/End: Complemental strand, 931600 - 931239
Alignment:
Q  234 aagaggaaattctatgagcaaatttgaggaattttatttcaaaggaatgctaacaacactct----------cttt----aatactcactctcttattag 319  Q
    |||||||||||||||||||||||||||||||||| |||| | |||||||||| |||||||||          ||||    |||| ||||||| ||||| |    
T  931600 aagaggaaattctatgagcaaatttgaggaatttcatttaagaggaatgctagcaacactcttcttttaacactttttctaatattcactcttttattgg 931501  T
Q  320 tttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaat 419  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||| ||| ||||||| |      
T  931500 tttaaatcattgtgggtgtatattttgaaaattgaacccacaaaaaatgatgggacatacattgcttccattcaataaaagagtgagtattagagataga 931401  T
Q  420 gttaaaaagtgagtgttactagcattcctttttcattcaattcaactcattatgttgaacaatacatttttacacaagctaattagccatgcatagcctc 519  Q
    ||| ||||||||||||| ||||||||||| | ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||    
T  931400 gttgaaaagtgagtgttgctagcattcctctgtcattcagttcaactcattatgttgcacaatacatttttacacaagctaattagctatgcatagtctc 931301  T
Q  520 ttggtaacactcctaccagcttctaaccgtttgtaactgccgaaccaatttacccaactggt 581  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  931300 ttggtaacactcctaccagcttctaaccgtttgtaactgccgaaccaatttacgcaactggt 931239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 276 - 448
Target Start/End: Complemental strand, 41958253 - 41958083
Alignment:
Q  276 aggaatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaac 375  Q
    |||||||||||||||||||| | ||||||||||||||||||| |||||||||| ||||||| || |||||||||||| ||||| || |||||| ||| ||    
T  41958253 aggaatgctaacaacactctttctaatactcactctcttattggtttaaatcactgtgggtctacactttgaaaattgaacccccacaaaatggtgggac 41958154  T
Q  376 atacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||| || ||||||||||| |||| |||| | |||||  |||| |||||||||||||||||||||||||    
T  41958153 atacattgatttcatccaataaatgagtgagtgcttgagag--tgttgaaaagtgagtgttactagcattcct 41958083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 287 - 448
Target Start/End: Original strand, 26980283 - 26980444
Alignment:
Q  287 caacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgctt 386  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||||| |||||| |||||||||| ||| |||| |||||| ||| |||||||||| ||    
T  26980283 caacactctctataatactcactctcttattgatttaaatcattgtggatgtatattttgaaaattgaactcacacaaaatggtgggacatacattgatt 26980382  T
Q  387 ccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
     |||||||||| ||||| ||| ||||||||| |||| |||||||||||||  ||||||||||    
T  26980383 tcatccaataatagagtgagtattagagagagtgttgaaaagtgagtgttgttagcattcct 26980444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 294 - 448
Target Start/End: Original strand, 6133653 - 6133806
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcca 393  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||| |||||||||||| |||||||| || ||| ||| ||||| |||| || ||||||    
T  6133653 ctctctaatactcactctcttattggtttaa-tcattgtgggtgtagactttgaaaattgaacccacacaatatggtgggacatatattgatttcatcca 6133751  T
Q  394 ataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||| || |||| |||||||| |||| ||||||||||||| |||||||||||    
T  6133752 ataaaagggtgagtgctagagagattgttgaaaagtgagtgttgctagcattcct 6133806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 288 - 430
Target Start/End: Complemental strand, 33193208 - 33193066
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||| ||| ||||||||| ||||||||| |||||||||||||||||| || |||||||||||| ||||| || |||||| ||| |||||||||| ||     
T  33193208 aacactttctctaatactcattctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccctcacaaaatggtggcacatacattgattt 33193109  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtg 430  Q
    |||||||||||  ||| ||| ||| ||||||||||||||||||    
T  33193108 catccaataaataagtgagtattatagagaatgttaaaaagtg 33193066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 279 - 448
Target Start/End: Complemental strand, 44272085 - 44271916
Alignment:
Q  279 aatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacata 378  Q
    ||||||||||||||||| | ||||||||| | | |||||  ||||||||||||| | | || |||||||||||| |||| |||||||||| |||||||||    
T  44272085 aatgctaacaacactctttctaatactcatttttttattgatttaaatcattgttgttctacactttgaaaattgaacctacaaaaaatggtggaacata 44271986  T
Q  379 cattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||| || ||| |||||||| |||||||| || ||||| |||| |||||||  |||| |||||||||||    
T  44271985 cattgatttcattcaataaaatagtaagtgctaaagagagtgtttaaaagtggatgttgctagcattcct 44271916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 294 - 427
Target Start/End: Original strand, 37552977 - 37553110
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcca 393  Q
    ||||||||||||||||||||||||  ||||||||||||||| | || ||||||||||| |||||||| |||| |||||| ||| |||||  || ||||||    
T  37552977 ctctttaatactcactctcttattgatttaaatcattgtggatctacactttgaaaataaaacccactaaaagtgatgggacaaacattaatttcatcca 37553076  T
Q  394 ataaaagagtaagtgttagagagaatgttaaaaa 427  Q
    |||| | |||||||| |||||||| |||| ||||    
T  37553077 ataagaaagtaagtgctagagagagtgttcaaaa 37553110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 288 - 454
Target Start/End: Complemental strand, 25543497 - 25543332
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||||| |  |  || |||  ||| | ||| ||| ||| || ||| ||||| |||| ||     
T  25543497 aacactctctctaatactcactatcttattggtttaaatcattgtgaggctgcacattgggaat-atacctacacaaagtggtgggacatatattgattt 25543399  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcctttttca 454  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||| |||||    
T  25543398 catcaaataaaagagtaagtgttagagagagtgtttaaaagtgagtgttgctagcattcctctttca 25543332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 288 - 445
Target Start/End: Complemental strand, 8899172 - 8899015
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||||   || |||||||||||| |||||||| |||  | ||| |||||| ||  ||     
T  8899172 aacactctctctaatactcactctcttattggtttaaattattgtggacctacactttgaaaattgaacccacacaaaggggtgggacatacctttattt 8899073  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    |||| ||| ||| || ||||||||||| ||||||| ||||||||||||| ||| ||||    
T  8899072 catctaattaaatagcaagtgttagagggaatgttgaaaagtgagtgttgctaacatt 8899015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 299 - 399
Target Start/End: Original strand, 8741256 - 8741356
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||| ||| |  ||  |||||||||| || |||||||||||    
T  8741256 taatactcactctcttattagtttaaatcattgtgtgtttatactttgaaaattgaacccacacaaattagtgagacatacattgatttcatccaataaa 8741355  T
Q  399 a 399  Q
    |    
T  8741356 a 8741356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 288 - 436
Target Start/End: Complemental strand, 11987784 - 11987636
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||| | |||||  |||||||||| | |||||||||||||||||| || |||||||||||| ||||| ||  || || |||||||||||||  ||     
T  11987784 aacactctttctaatatccactctcttaatggtttaaatcattgtgggtctacactttgaaaattgaacccgcactaagtggtggaacatacattaattt 11987685  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    ||||||||||| || ||| |||| |||||| |||| |||||||||||||    
T  11987684 catccaataaatgaataaatgttggagagagtgttgaaaagtgagtgtt 11987636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 288 - 430
Target Start/End: Original strand, 41948168 - 41948310
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||| |||||||||||||||  ||||||||||||||| | || |||||||||||| |||| ||| ||| || | ||| |||||||| ||     
T  41948168 aacactctctctaacactcactctcttattgatttaaatcattgtggatttacactttgaaaattgaaccaacacaaagtggtagaatatacattgattt 41948267  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtg 430  Q
     ||||||||||||||| ||| ||||| | | ||||||||||||    
T  41948268 tatccaataaaagagtgagtattagaaatagtgttaaaaagtg 41948310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 301 - 448
Target Start/End: Complemental strand, 2225369 - 2225224
Alignment:
Q  301 atactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaag 400  Q
    ||||||||| ||||||| |||||||||| ||| ||| || |||||| |||   |||||||| ||| || ||| |||||||||| || |||||||||||||    
T  2225369 atactcactttcttattggtttaaatcactgtcggtctacactttgtaaaccgaacccacacaaagtggtgggacatacattgatttcatccaataaaag 2225270  T
Q  401 agtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||  ||| |||||||  |||| |||| ||||||||||||||||||||    
T  2225269 agtgggtgctagagag--tgttgaaaattgagtgttactagcattcct 2225224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 308 - 415
Target Start/End: Complemental strand, 37525667 - 37525560
Alignment:
Q  308 ctctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagt 407  Q
    ||||||||||||||||||||||||| | | || |||||||||||| |||||||| |||||| |||||||||||| | ||  ||||||| ||||||| | |    
T  37525667 ctctcttattagtttaaatcattgtagatctagactttgaaaattgaacccacataaaatggtggaacatacatgggttttatccaatgaaagagtgaat 37525568  T
Q  408 gttagaga 415  Q
    ||||||||    
T  37525567 gttagaga 37525560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 288 - 446
Target Start/End: Original strand, 19101623 - 19101781
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||  | | || |||||||||||  ||| | || ||| || ||| |||||||||| ||     
T  19101623 aacactctctctaatactcactttcttattggtttaaatcattgcagatctacactttgaaaatagaactcgcataaagtggtgggacatacattgattt 19101722  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    |||||||||||| ||| |||| || ||||| |||  |||||||| |||| |||||||||    
T  19101723 catccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 19101781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 31866470 - 31866361
Alignment:
Q  291 actctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccat 390  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | || ||||| |||||| ||||  ||||||||  ||| |||||||||| || |||    
T  31866470 actctctttaatactcactttcttattagtttaaatcattgtggat-tacactttaaaaattgaaccttcaaaaaatagtgggacatacattgatttcat 31866372  T
Q  391 ccaataaaaga 401  Q
    |||| ||||||    
T  31866371 ccaacaaaaga 31866361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 383
Target Start/End: Original strand, 45179254 - 45179363
Alignment:
Q  274 aaaggaatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatgga 373  Q
    |||| |||| ||||| |||||||| ||||||||| | |||||||| ||||| | ||||||||| || |||||||||||| ||||| || ||| |||||||    
T  45179254 aaagcaatgttaacagcactctctctaatactcattttcttattaatttaagttattgtgggtttacactttgaaaattgaaccctcacaaagtgatgga 45179353  T
Q  374 acatacattg 383  Q
    ||||||||||    
T  45179354 acatacattg 45179363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 416
Target Start/End: Complemental strand, 51732424 - 51732307
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||| |||| ||| |  ||||| |||||||  || |||| ||||||    
T  51732424 taatactcactcttttattggtttaaattattgtgggtttatactttgaaaattaaactcacataaagtagtggaaaatacattaatttcatcaaataaa 51732325  T
Q  399 agagtaagtgttagagag 416  Q
    | ||| | ||||||||||    
T  51732324 aaagtgaatgttagagag 51732307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 288 - 436
Target Start/End: Complemental strand, 27570383 - 27570235
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| | | | ||||| ||||||||||| |||||||||||||| || ||||| |||||||||| |||| ||| || ||| |||||  ||  ||     
T  27570383 aacactctctctcaaattcactttcttattagttcaaatcattgtgggtttacactttaaaaattaaactcacacaaattggtgggacatatcttaattt 27570284  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    || ||||||||||| | ||||| ||||||| ||||||||||||| ||||    
T  27570283 caaccaataaaagaatgagtgtcagagagagtgttaaaaagtgactgtt 27570235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 279 - 422
Target Start/End: Complemental strand, 29673642 - 29673499
Alignment:
Q  279 aatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacata 378  Q
    ||||||| ||||||||||| ||||||||||| | ||||| |||||||| ||||| | | || |||||||||||| || | ||| |||||| ||| |||||    
T  29673642 aatgctagcaacactctctctaatactcacttttttattggtttaaataattgtagttctacactttgaaaattgaaactacacaaaatggtgggacata 29673543  T
Q  379 cattgcttccatccaataaaagagtaagtgttagagagaatgtt 422  Q
     |||| ||  ||||||||||| | | ||||||||||||| ||||    
T  29673542 tattgattttatccaataaaataatgagtgttagagagagtgtt 29673499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 288 - 445
Target Start/End: Original strand, 10659791 - 10659948
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||| ||| |||||| |||||||||||| ||||||||||| |||||| || |||||||||||| |||| ||| ||| || | | |||| ||||| ||     
T  10659791 aacactttctctaatac-cactctcttattggtttaaatcatcgtgggtctacactttgaaaattgaacctacacaaagtggtcggacatccattgattt 10659889  T
Q  388 catccaat-aaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    ||||| || |||| ||| ||||||||||||| | || ||||||||||||| ||| ||||    
T  10659890 catcccataaaaaaagtgagtgttagagagagtattgaaaagtgagtgttgctaacatt 10659948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 290 - 383
Target Start/End: Original strand, 30678935 - 30679028
Alignment:
Q  290 cactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattg 383  Q
    |||||||| ||| ||||||||||||||| | ||||||||||||| || || |||||||||||| |||||||| ||| || ||| ||||||||||    
T  30678935 cactctctctaacactcactctcttattggcttaaatcattgtgagtctacactttgaaaattgaacccacacaaagtggtgggacatacattg 30679028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 287 - 422
Target Start/End: Original strand, 32211805 - 32211940
Alignment:
Q  287 caacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgctt 386  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||||||||| || || || |||||| ||| |||| ||| |  | | |||||||||| ||    
T  32211805 caacactttctttaatgatcactctcttattggtttaaatcattgtgggtctacaccttaaaaattgaactcacacaaagtagttggacatacattgatt 32211904  T
Q  387 ccatccaataaaagagtaagtgttagagagaatgtt 422  Q
     |||| ||||||||||| |||| | |||||| ||||    
T  32211905 tcatctaataaaagagtgagtgctggagagagtgtt 32211940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 281 - 368
Target Start/End: Original strand, 47644310 - 47644399
Alignment:
Q  281 tgctaacaacactctcttt--aatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatg 368  Q
    |||||||||||||||||||  ||||||| ||||||||||  ||||||||||||||||| || || ||||||||  |||||||| ||||||    
T  47644310 tgctaacaacactctcttttaaatactcgctctcttattgatttaaatcattgtgggtttacacattgaaaatagaacccacacaaaatg 47644399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 436
Target Start/End: Original strand, 28218081 - 28218218
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||||||||| |||||||| ||||||| | ||||| | || |||||||||||| || ||||| ||| || ||  |||||||||| || |||||||||||    
T  28218081 taatactcactatcttattaatttaaattactgtggttctacactttgaaaattgaatccacacaaagtggtgagacatacattgatttcatccaataaa 28218180  T
Q  399 agagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    ||||| | || || |||||  ||| |||| ||||||||    
T  28218181 agagtgaatgctaaagagagggttgaaaaatgagtgtt 28218218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 410
Target Start/End: Complemental strand, 50539257 - 50539160
Alignment:
Q  313 ttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgtt 410  Q
    ||||||||||||||||||| | || || |||  ||||||| |||||||| ||| || |||||||||| ||| || |||||||||||||||| ||||||    
T  50539257 ttattagtttaaatcattgcgtgtctacactgagaaaattgaacccacataaagtggtggaacatactttgatttcatccaataaaagagtgagtgtt 50539160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 11385953 - 11386003
Alignment:
Q  30 gggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    ||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  11385953 gggcaatggttaagaaaaccaaaagtagcatgtttgcattggtttcaacaa 11386003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 300 - 410
Target Start/End: Complemental strand, 15468366 - 15468256
Alignment:
Q  300 aatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaa 399  Q
    |||||| ||||| |||||| ||||||| ||||||||| || ||| |||||||| |||||||| ||| | |||  |||||||||| ||| ||  |||||||    
T  15468366 aatacttactcttttattaatttaaattattgtgggtctacactatgaaaattgaacccacacaaagtaatgagacatacattgattctatttaataaaa 15468267  T
Q  400 gagtaagtgtt 410  Q
    |||| ||||||    
T  15468266 gagtgagtgtt 15468256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 314 - 435
Target Start/End: Complemental strand, 743551 - 743430
Alignment:
Q  314 tattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttaga 413  Q
    |||| |||||||||||||| ||| | || ||||||||||||||   || ||| ||||||||||||||||| || |||||||||||  | | | | ||| |    
T  743551 tatttgtttaaatcattgtaggtctctattttgaaaattaaacttccacaaagtgatggaacatacattgatttcatccaataaacaattgaattttaaa 743452  T
Q  414 gagaatgttaaaaagtgagtgt 435  Q
    |||| ||||||||| |||||||    
T  743451 gagagtgttaaaaaatgagtgt 743430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 288 - 446
Target Start/End: Complemental strand, 22540522 - 22540368
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||||||||||| |||    |||| ||||||||||||| || | || |||||| ||||  ||| | || ||| || ||| |||||||||| ||     
T  22540522 aacactctctttaatactaact----tattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggacatacattgattt 22540427  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    |||||||||||| ||| |||| || ||||| |||  |||||||| |||| |||||||||    
T  22540426 catccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 22540368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 31975460 - 31975509
Alignment:
Q  31 ggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    |||||||||||||||| |||||| |||||||||||||||||||| |||||    
T  31975460 ggcaatggttaagaaagctaaaaataacatgtttgcattagttttaacaa 31975509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 50154430 - 50154495
Alignment:
Q  15 atagggtgttgttaagggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    ||||||| ||| |||||| |||||||||| || | |||||||||||||||||||| ||||||||||    
T  50154430 atagggtcttgctaagggtaatggttaaggaagccaaaagtaacatgtttgcattggtttcaacaa 50154495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 446
Target Start/End: Original strand, 3872649 - 3872813
Alignment:
Q  279 aatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacata 378  Q
    ||||||| ||||||||| || ||  ||| |||| ||||| |||| ||||||||||||| || |||||| ||||| |||| ||| ||| || ||  |||||    
T  3872649 aatgctagcaacactcttttcaa--ctctctcttttattggtttgaatcattgtgggtctacactttggaaattgaacctacacaaagtggtgtgacata 3872746  T
Q  379 cattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
     |||| ||  ||  |||| |||||| |||| |||||||| |||| ||||||||||||| |||||||||    
T  3872747 tattgattt-atttaatagaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattc 3872813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 445
Target Start/End: Original strand, 41095684 - 41095788
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    |||||||||||  |||||||| | | |||||| |||||||||| || || |||||||| |||| |||| |||||||| || | ||||| ||||||| |||    
T  41095684 actttgaaaatggaacccacacagagtgatgggacatacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagagagtgttgcta 41095783  T
Q  441 gcatt 445  Q
    |||||    
T  41095784 gcatt 41095788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 47895308 - 47895356
Alignment:
Q  32 gcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    |||||||||||| || | |||||||||||||||||||||||||||||||    
T  47895308 gcaatggttaaggaagccaaaagtaacatgtttgcattagtttcaacaa 47895356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 931700 - 931647
Alignment:
Q  198 tatatatataggaataacgaaggtac---atccttttataagaggaaattctat 248  Q
    |||||||||||||||||| |||||||   |||||||||||||||||||||||||    
T  931700 tatatatataggaataacaaaggtactacatccttttataagaggaaattctat 931647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 341 - 448
Target Start/End: Complemental strand, 11135844 - 11135737
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    |||||| ||||  |||||||| ||| || ||| |||||||||| || || ||||||||| ||| |||| |||||||| || | ||||| ||||||| |||    
T  11135844 actttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaatagtgagtgctagagagagtgctcaaaagagagtgttgcta 11135745  T
Q  441 gcattcct 448  Q
    ||||||||    
T  11135744 gcattcct 11135737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 448
Target Start/End: Complemental strand, 13388403 - 13388332
Alignment:
Q  377 tacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||| || |||||||||||| ||| ||||||||||||| | || ||||| ||||||| |||||||||||    
T  13388403 tacattgatttcatccaataaaaaagtgagtgttagagagagtattcaaaagagagtgttgctagcattcct 13388332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 341 - 448
Target Start/End: Original strand, 32848658 - 32848765
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    |||||||||||  || ||||| ||| || ||| ||||||| || || || ||||||||||||| |||| |||||||| |||| ||||| |||||||  ||    
T  32848658 actttgaaaatggaatccacataaagtggtgggacatacaatgatttcacccaataaaagagtgagtgctagagagagtgttcaaaagagagtgttgtta 32848757  T
Q  441 gcattcct 448  Q
    ||||||||    
T  32848758 gcattcct 32848765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 306 - 361
Target Start/End: Original strand, 33059933 - 33059988
Alignment:
Q  306 cactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccaca 361  Q
    |||||||||||| ||||||| ||||||| ||||| ||||| |||||||||||||||    
T  33059933 cactctcttattggtttaaaacattgtgagtgtacactttaaaaattaaacccaca 33059988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 7190606 - 7190560
Alignment:
Q  33 caatggttaagaaaactaaaagtaacatgtttgcattagtttcaaca 79  Q
    ||||||||||| || ||||||||| ||||||||||||||||||||||    
T  7190606 caatggttaaggaagctaaaagtagcatgtttgcattagtttcaaca 7190560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 450
Target Start/End: Original strand, 39039477 - 39039539
Alignment:
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattccttt 450  Q
    |||||||||||||||| |||| || | ||| |||| ||||||||||||| |||||||||||||    
T  39039477 catccaataaaagagtgagtgctaaaaagagtgttgaaaagtgagtgttgctagcattccttt 39039539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 33114002 - 33114039
Alignment:
Q  295 tctttaatactcactctcttattagtttaaatcattgt 332  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  33114002 tctttaatactcactttcttattagtttaaatcattgt 33114039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 287 - 444
Target Start/End: Complemental strand, 35337019 - 35336868
Alignment:
Q  287 caacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgctt 386  Q
    ||||||||||| ||||||||  ||||||||| ||||||||||||||| || || | |  ||||||| |||||||| ||| || ||    | |||||| ||    
T  35337019 caacactctctctaatactcgttctcttattggtttaaatcattgtgtgtctacattaagaaaattgaacccacacaaagtggtg----agacattgatt 35336924  T
Q  387 ccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcat 444  Q
     |||||||||||| | | |||| |  |||| ||||| ||||||||||||| |||||||    
T  35336923 tcatccaataaaataatgagtgct--agaggatgttgaaaagtgagtgttgctagcat 35336868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 418
Target Start/End: Complemental strand, 36567001 - 36566924
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaa 418  Q
    |||||||||||  |||||| | ||| |||||  |||||||||| || |||||||||||| ||||||||||| ||||||    
T  36567001 actttgaaaatagaacccaaataaagtgatgagacatacattgatttcatccaataaaatagtaagtgttaaagagaa 36566924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 446
Target Start/End: Complemental strand, 41918100 - 41917995
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    |||||||||||  || ||||| ||| || ||| |||||||||| || || ||||||||||||| |||| |||||||  || | ||||| ||||||| |||    
T  41918100 actttgaaaatggaatccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagagagggtgctcaaaagagagtgttgcta 41918001  T
Q  441 gcattc 446  Q
    ||||||    
T  41918000 gcattc 41917995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 422
Target Start/End: Complemental strand, 15928707 - 15928579
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcca 393  Q
    |||| ||||||||||||| ||||| |||||||||| |||  || || || ||||||||  ||| |||| |||||| ||  ||||||||   ||||||| |    
T  15928707 ctctctaatactcactcttttattggtttaaatcactgtaagtctacaccttgaaaatagaactcacacaaaatggtgagacatacatgaattccatcaa 15928608  T
Q  394 ataaaagagtaagtgttagagagaatgtt 422  Q
    ||||||||||  ||| |||||||| ||||    
T  15928607 ataaaagagtgggtgctagagagagtgtt 15928579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 380
Target Start/End: Complemental strand, 33114129 - 33114037
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacataca 380  Q
    |||||||||| ||  ||||||| | ||||| |||||||||||| ||| | || |||||||||||| |||| ||| |||||| ||| |||||||    
T  33114129 aacactctctataggactcacttttttattggtttaaatcattctggatctacactttgaaaattgaacctacataaaatggtgggacataca 33114037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 448
Target Start/End: Complemental strand, 11430546 - 11430439
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    |||||| ||||  |||||||| ||| || ||| |||||||||| || || ||||||||||||| |||| |||| ||| || | ||||| |||||||  ||    
T  11430546 actttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagaaagagtgctcaaaagagagtgttgtta 11430447  T
Q  441 gcattcct 448  Q
    ||||||||    
T  11430446 gcattcct 11430439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 416
Target Start/End: Complemental strand, 24911588 - 24911493
Alignment:
Q  321 ttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagag 416  Q
    ||||||||||| |  | ||||||||| |||| ||||||||||||| || ||| |||||||| | || |||| ||||||||| | |||| |||||||    
T  24911588 ttaaatcattgcgtatctatactttggaaataaaacccacaaaaagtggtgggacatacatggatttcatcgaataaaagaatgagtgctagagag 24911493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 422
Target Start/End: Complemental strand, 49730991 - 49730888
Alignment:
Q  319 gtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaa 418  Q
    |||||||||||||||||| || |||||||||||| |||||||| ||| |  ||  ||||| |||  ||  ||| ||||||||||| ||||||| |||||     
T  49730991 gtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtagtgtgacatatattagtttaatctaataaaagagtgagtgttatagagag 49730892  T
Q  419 tgtt 422  Q
    ||||    
T  49730891 tgtt 49730888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 417
Target Start/End: Original strand, 50773199 - 50773262
Alignment:
Q  354 aacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagaga 417  Q
    |||||||| ||| || ||||||||| |||| ||  ||||||||||||||| |||||||||||||    
T  50773199 aacccacataaagtggtggaacatatattgattttatccaataaaagagtgagtgttagagaga 50773262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 932287 - 932241
Alignment:
Q  34 aatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    |||||||||| ||  |||||||| |||||||||||||||||||||||    
T  932287 aatggttaaggaaggtaaaagtagcatgtttgcattagtttcaacaa 932241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 288 - 403
Target Start/End: Original strand, 1093091 - 1093210
Alignment:
Q  288 aacactctctttaatactcactct----cttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattg 383  Q
    ||||||||||||||||| |||| |    |||||||||||||||||||||||   || |||||| ||||  ||| || | ||| || ||||||||||||||    
T  1093091 aacactctctttaatacccactatatatcttattagtttaaatcattgtggaactacactttggaaatataactcatacaaagtggtggaacatacattg 1093190  T
Q  384 cttccatccaataaaagagt 403  Q
     || |||| |||||| ||||    
T  1093191 atttcatctaataaacgagt 1093210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 52396412 - 52396462
Alignment:
Q  27 taagggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaa 77  Q
    ||||||||||||||||| ||| ||||| || |||||||||||| |||||||    
T  52396412 taagggcaatggttaaggaaattaaaaatagcatgtttgcatttgtttcaa 52396462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 6170684 - 6170635
Alignment:
Q  31 ggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    ||||||||||||| ||   |||||||||||||||||||| ||||||||||    
T  6170684 ggcaatggttaaggaagtcaaaagtaacatgtttgcattggtttcaacaa 6170635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 448
Target Start/End: Original strand, 11430568 - 11430625
Alignment:
Q  391 ccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||||||||| |||| |||||||| || | ||||| ||||||| |||||||||||    
T  11430568 ccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcct 11430625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 328
Target Start/End: Complemental strand, 27794301 - 27794272
Alignment:
Q  299 taatactcactctcttattagtttaaatca 328  Q
    ||||||||||||||||||||||||||||||    
T  27794301 taatactcactctcttattagtttaaatca 27794272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 332
Target Start/End: Original strand, 39974233 - 39974266
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgt 332  Q
    ||||||||||||||||||| ||||||||||||||    
T  39974233 taatactcactctcttattggtttaaatcattgt 39974266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 932171 - 932135
Alignment:
Q  147 ccccttattcaatgccccaagagcaatgattaacatt 183  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  932171 ccccttatccaatgccccaagaacaatgattaacatt 932135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 435
Target Start/End: Complemental strand, 28274865 - 28274797
Alignment:
Q  367 tgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgt 435  Q
    |||||| ||||||| |  || |||||||||| ||||| ||||||||||||| |||| ||||| ||||||    
T  28274865 tgatgggacatacactagtttcatccaataagagagtgagtgttagagagagtgttgaaaagagagtgt 28274797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 34874659 - 34874703
Alignment:
Q  147 ccccttattcaatgccccaagagcaatgattaacattctccttaa 191  Q
    |||||||| |||||||||||| |||||| ||| ||||||||||||    
T  34874659 ccccttatccaatgccccaagggcaatggttagcattctccttaa 34874703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 8e-41; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 288 - 445
Target Start/End: Complemental strand, 34905494 - 34905337
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||||| || |||||||||||| |||||| | ||| || ||| |||||||||| ||     
T  34905494 aacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaagtggtgggacatacattgattt 34905395  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    |||||||||||||||| ||||||||||||| |||| |||| |||||||| ||||||||    
T  34905394 catccaataaaagagtgagtgttagagagagtgttgaaaaatgagtgttgctagcatt 34905337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 276 - 436
Target Start/End: Original strand, 31116134 - 31116294
Alignment:
Q  276 aggaatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaac 375  Q
    |||| ||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| || || ||| ||||  ||| |||| ||| |  ||| ||    
T  31116134 aggagtgctagcaacactctctctaatactcactctcttattggtttaaatcattgtgggtttacacattggaaatagaacacacacaaagtagtgggac 31116233  T
Q  376 atacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    |||||||| || ||||||||| |||||| | ||||||||||| |||| |||||||||||||    
T  31116234 atacattgatttcatccaatagaagagtgaatgttagagagagtgttcaaaagtgagtgtt 31116294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 291 - 446
Target Start/End: Original strand, 10133183 - 10133338
Alignment:
Q  291 actctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccat 390  Q
    |||| |||||||||||||||| ||||| |||||||||||||||| | || |||||||||||| ||||| || ||| || ||| ||||||| |  || |||    
T  10133183 actcactttaatactcactcttttattggtttaaatcattgtggttctacactttgaaaattgaacccccataaagtggtgggacatacaataatttcat 10133282  T
Q  391 ccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    |||||||| |||| ||||||||||||| |||| ||||||||||||| ||| |||||    
T  10133283 ccaataaatgagtgagtgttagagagagtgttgaaaagtgagtgtttctaccattc 10133338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 287 - 448
Target Start/End: Complemental strand, 445977 - 445816
Alignment:
Q  287 caacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgctt 386  Q
    ||||||||||| ||||||||| ||||||||| |||||||||||||||  | || |||||||||||| |||||||| ||| || ||  |||||||||| ||    
T  445977 caacactctctctaatactcattctcttattggtttaaatcattgtgactctagactttgaaaattgaacccacacaaagtggtgtgacatacattgatt 445878  T
Q  387 ccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
     |||||||||||| ||| |||| |||||| | |||| |||| ||||| || |||||||||||    
T  445877 tcatccaataaaaaagtgagtgctagagatagtgttgaaaaatgagtattgctagcattcct 445816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 288 - 436
Target Start/End: Complemental strand, 5106456 - 5106308
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||| |||| ||||| ||||||| ||||| ||||||||| ||||||||||| |||||||||||| | |||||| ||| || ||| |||||||||| ||     
T  5106456 aacacactctctaatattcactctattattggtttaaatccttgtgggtgtacactttgaaaattgatcccacacaaagtggtgggacatacattgattt 5106357  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
     ||||||||||| ||| ||||||||||| | |||| |||||||||||||    
T  5106356 tatccaataaaaaagtgagtgttagagaaagtgttgaaaagtgagtgtt 5106308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 290 - 417
Target Start/End: Original strand, 17144695 - 17144822
Alignment:
Q  290 cactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttcca 389  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||| || |||||||||||| |||| ||| |||| | ||||||||| |||| || ||    
T  17144695 cactctctttaatacttactcctttattagtttaaatcattgtgggtctacactttgaaaatttaacctacacaaaacggtggaacatatattgatttca 17144794  T
Q  390 tccaataaaagagtaagtgttagagaga 417  Q
    | |||||||| |||||||| ||||||||    
T  17144795 ttcaataaaatagtaagtgctagagaga 17144822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 279 - 436
Target Start/End: Complemental strand, 2676062 - 2675905
Alignment:
Q  279 aatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacata 378  Q
    ||||||| ||||||||||| ||||||||||| | ||||| ||||||| |||||||||| || | ||||||||||||||| | | ||| || ||| |||||    
T  2676062 aatgctagcaacactctctctaatactcacttttttattggtttaaaccattgtgggtctacattttgaaaattaaacctaaacaaagtggtgggacata 2675963  T
Q  379 cattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    |||||  | ||| |||||||||||| | ||||| | | |||||| |||| ||||||||    
T  2675962 cattgaattcattcaataaaagagtgaatgttaaaaaaaatgttgaaaaatgagtgtt 2675905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 448
Target Start/End: Original strand, 12753781 - 12753942
Alignment:
Q  287 caacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgctt 386  Q
    ||||||||||| |||||||| |||| ||||||||||||||||||||| ||||| ||  |||||||  |||||||| ||| || ||| |||| |||   ||    
T  12753781 caacactctctctaatactcgctcttttattagtttaaatcattgtgagtgtacaccctgaaaatagaacccacacaaagtggtgggacatgcatgtatt 12753880  T
Q  387 ccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
      ||||||| ||||||| | || || | ||| |||| ||||||||||||| |||||||||||    
T  12753881 ttatccaatgaaagagtgattgctataaagagtgttcaaaagtgagtgttgctagcattcct 12753942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 288 - 399
Target Start/End: Original strand, 32112739 - 32112850
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||| ||||| ||||| |||||||||||||  ||||||||||||||| | || ||||||||||| ||||||||| |||||| ||  |||| ||||| ||     
T  32112739 aacattctctctaatattcactctcttattgttttaaatcattgtggatctacactttgaaaataaaacccacacaaaatggtgtgacatgcattgattt 32112838  T
Q  388 catccaataaaa 399  Q
    ||||||||||||    
T  32112839 catccaataaaa 32112850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 290 - 449
Target Start/End: Original strand, 20128798 - 20128954
Alignment:
Q  290 cactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccaca-aaaaatgatggaacatacattgcttcc 388  Q
    ||||||||||| ||||||||| |||||| |||||||| |||| |||  |    |||||||||||||||   | ||||||||||| |||||||||| || |    
T  20128798 cactctctttagtactcactcccttattggtttaaattattgggggcat----tttgaaaattaaaccattacaaaaatgatgggacatacattgatttc 20128893  T
Q  389 atccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcctt 449  Q
    | | |||||| |||| | |||| |||| ||||| ||||||| |||||| ||||||||||||    
T  20128894 accaaataaatgagtgactgtttgagaaaatgtaaaaaagtaagtgttgctagcattcctt 20128954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 290 - 449
Target Start/End: Complemental strand, 22204072 - 22203916
Alignment:
Q  290 cactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccaca-aaaaatgatggaacatacattgcttcc 388  Q
    ||||||||||| ||||||||| |||||| |||||||| |||| |||  |    |||||||||||||||   | ||||||||||| |||||||||| || |    
T  22204072 cactctctttagtactcactcccttattggtttaaattattgggggcat----tttgaaaattaaaccattacaaaaatgatgggacatacattgatttc 22203977  T
Q  389 atccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcctt 449  Q
    | | |||||| |||| | |||| |||| ||||| ||||||| |||||| ||||||||||||    
T  22203976 accaaataaatgagtgactgtttgagaaaatgtaaaaaagtaagtgttgctagcattcctt 22203916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 292 - 446
Target Start/End: Complemental strand, 13001846 - 13001692
Alignment:
Q  292 ctctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatc 391  Q
    ||||||| |||| ||||||| ||||| ||||||||| || | ||| || | |||| ||||| || ||||| |||||||||  |||||||||  ||  |||    
T  13001846 ctctcttcaatattcactcttttattggtttaaatctttataggtttacattttgcaaattgaatccacataaaatgatgtgacatacatttattttatc 13001747  T
Q  392 caataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    |||| ||| | | | ||||||||||| || | |||||||||||||||||||||||    
T  13001746 caatgaaaaaatgaatgttagagagagtgctgaaaagtgagtgttactagcattc 13001692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 288 - 446
Target Start/End: Complemental strand, 21987450 - 21987292
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||| || | || |||||| ||||  ||| | || ||| || ||| | |||||||| ||     
T  21987450 aacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggatatacattgattt 21987351  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    |||||||||||| ||| |||| || ||||| |||  |||||||| ||||  ||||||||    
T  21987350 catccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgttagcattc 21987292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 279 - 445
Target Start/End: Complemental strand, 32122962 - 32122796
Alignment:
Q  279 aatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacata 378  Q
    ||||||| ||||||| ||| || || ||||| | ||||| | |||||||||||||||| || |||||||||||| ||| | || |||||| ||| |||||    
T  32122962 aatgctagcaacactatctctattattcacttttttattggcttaaatcattgtgggtctacactttgaaaattgaactcccacaaaatggtgggacata 32122863  T
Q  379 cattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
     |||| || |||||||||||  ||| |||| | || ||| |||| ||||| |||||||  |||||||    
T  32122862 tattgatttcatccaataaataagtgagtggtggaaagagtgttgaaaagagagtgttgttagcatt 32122796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 299 - 446
Target Start/End: Complemental strand, 1392774 - 1392630
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||||||||||||||||| |||||||||||||||||  || | ||| |||||| ||| || | ||| |  ||  |||||||||| || |||||||||||    
T  1392774 taatactcactctcttattggtttaaatcattgtggg-ctacattttaaaaattgaacacatacaaagtagtgagacatacattgatttcatccaataaa 1392676  T
Q  399 agagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    | |   |||| |||||||  |||||||||||||||||||||| |||||    
T  1392675 aaatagagtgctagagag--tgttaaaaagtgagtgttactaacattc 1392630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 299 - 411
Target Start/End: Original strand, 16852006 - 16852118
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    |||||| |||||||||||| |||||||||||||||||| || |||||||||||| |||||  | ||| || ||| |||||||||  || |||| ||||||    
T  16852006 taatacccactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccctacaaagtggtgggacatacatttatttcatctaataaa 16852105  T
Q  399 agagtaagtgtta 411  Q
      | |||||||||    
T  16852106 taaataagtgtta 16852118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 19737487 - 19737431
Alignment:
Q  391 ccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcc 447  Q
    ||||||||||||| |||| ||||||||||||| ||||| ||||||| ||||||||||    
T  19737487 ccaataaaagagtgagtgatagagagaatgttcaaaagagagtgttgctagcattcc 19737431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 288 - 403
Target Start/End: Original strand, 32598970 - 32599085
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||| ||||||||||||||||||| |||||  ||||||||||||||  | || |||||| ||||   ||||||| ||| ||  || ||||||||   |||    
T  32598970 aacattctctttaatactcactcttttattgatttaaatcattgtgaatctacactttggaaatagcacccacacaaagtggcgggacatacatgtattc 32599069  T
Q  388 catccaataaaagagt 403  Q
    ||||||||||||||||    
T  32599070 catccaataaaagagt 32599085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 32786041 - 32786091
Alignment:
Q  30 gggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    |||||||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  32786041 gggcaatggttaaggaaaccaaaagtagcatgtttgcattggtttcaacaa 32786091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 34882241 - 34882298
Alignment:
Q  279 aatgctaacaacactctcttt--aatactcactctcttattagtttaaatcattgtgg 334  Q
    ||||||| |||||||||||||  || ||||||||||||||| ||||||||||||||||    
T  34882241 aatgctagcaacactctcttttcaacactcactctcttattggtttaaatcattgtgg 34882298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 443
Target Start/End: Original strand, 35128798 - 35128900
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    |||||||||||  |||||||| ||| || ||| |||||||||| ||  | ||||||||||||| | || |||||||| |||| ||||| ||||||| |||    
T  35128798 actttgaaaatggaacccacataaagtggtgggacatacattgattttacccaataaaagagtgactgctagagagagtgttcaaaagagagtgttgcta 35128897  T
Q  441 gca 443  Q
    |||    
T  35128898 gca 35128900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 315 - 448
Target Start/End: Complemental strand, 31444090 - 31443957
Alignment:
Q  315 attagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagag 414  Q
    |||| |||||||| ||||| ||  | |||||||||||| |||| ||| |||||| ||||||||| |||  || |||||||||||||| | ||||||| |     
T  31444090 attaatttaaatccttgtgagtcaacactttgaaaattgaaccgacacaaaatggtggaacataaattaatttcatccaataaaagaatgagtgttaaaa 31443991  T
Q  415 agaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||| |||| |||| | | |||| ||||| |||||    
T  31443990 agagtgttgaaaaattattgttgctagccttcct 31443957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 448
Target Start/End: Original strand, 8441959 - 8442019
Alignment:
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||||||| |||| ||||||||||||| |||| |||| |||||| | |||||||||||    
T  8441959 catccaataaatgagtgagtgttagagagagtgttgaaaaatgagtgctgctagcattcct 8442019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 448
Target Start/End: Original strand, 8450763 - 8450823
Alignment:
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||||||| |||| ||||||||||||| |||| |||| |||||| | |||||||||||    
T  8450763 catccaataaatgagtgagtgttagagagagtgttgaaaaatgagtgctgctagcattcct 8450823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 448
Target Start/End: Complemental strand, 12690310 - 12690250
Alignment:
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||||||||||| |||||||||||||| |||| ||||  ||||||  |||||||||||    
T  12690310 catccaataaaagagcaagtgttagagagagtgtttaaaatagagtgtccctagcattcct 12690250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 12780781 - 12780897
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||| |||| ||||| ||| || |||||| |||||||||||||||| | || |||||||||||| |||| ||| ||| |  ||  |||||||||| |||    
T  12780781 aacaccctctctaatattcattcccttattggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaagtagtgagacatacattgattc 12780880  T
Q  388 catccaataaaagagta 404  Q
    || | ||||||| ||||    
T  12780881 cacctaataaaaaagta 12780897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 16437720 - 16437669
Alignment:
Q  29 agggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    ||||||||||||||| |||| || |||| |||||||||||| ||||||||||    
T  16437720 agggcaatggttaaggaaaccaacagtagcatgtttgcattggtttcaacaa 16437669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 448
Target Start/End: Original strand, 19090290 - 19090397
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    |||||| ||||  |||||||| ||| || ||| |||||||||| || || |||||||||||||  ||| |||||||| || | ||||| |||||||  ||    
T  19090290 actttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgtta 19090389  T
Q  441 gcattcct 448  Q
    ||||||||    
T  19090390 gcattcct 19090397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 16187460 - 16187518
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaatt 352  Q
    |||| |||||||||||| |||||| |||||||| ||||| ||| || ||||||||||||    
T  16187460 ctctctaatactcactcgcttattggtttaaataattgtaggtctacactttgaaaatt 16187518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 16187678 - 16187736
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaatt 352  Q
    |||| |||||||||||| |||||| |||||||| ||||| ||| || ||||||||||||    
T  16187678 ctctctaatactcactcgcttattggtttaaataattgtaggtctacactttgaaaatt 16187736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 448
Target Start/End: Complemental strand, 19090267 - 19090210
Alignment:
Q  391 ccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||||||||| |||| |||||||| || | ||||| ||||||| |||||||||||    
T  19090267 ccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcct 19090210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 5578244 - 5578296
Alignment:
Q  28 aagggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    |||||||||||||||| ||   ||||||| |||||||||||| ||||||||||    
T  5578244 aagggcaatggttaaggaagtcaaaagtagcatgtttgcatttgtttcaacaa 5578296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 8441871 - 8441935
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaatt 352  Q
    |||||||||| ||||||||||||| ||||| ||||| || ||||  ||| || ||||||||||||    
T  8441871 aacactctctctaatactcactcttttattggtttagattattgaaggtctacactttgaaaatt 8441935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 8450675 - 8450739
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaatt 352  Q
    |||||||||| ||||||||||||| ||||| ||||| || ||||  ||| || ||||||||||||    
T  8450675 aacactctctctaatactcactcttttattggtttagattattgaaggtctacactttgaaaatt 8450739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 354 - 422
Target Start/End: Original strand, 12327293 - 12327361
Alignment:
Q  354 aacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgtt 422  Q
    |||||||| |||||| | | |||||||||| ||| ||||||||||||||| | || |||||||| ||||    
T  12327293 aacccacacaaaatggtaggacatacattgattctatccaataaaagagtgactgctagagagagtgtt 12327361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 288 - 451
Target Start/End: Original strand, 6980142 - 6980305
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||| ||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||| |||| ||| || | |||||||| ||| ||     
T  6980142 aacactttctctaatactcactctcttattagttgaaatcattgtgggtctatactttgaaaattgaactcacacaaagtggtagaacataccttgattt 6980241  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcctttt 451  Q
    |||||||||||||||| |||| |||||||| |||| |||||||| |||| |||||||| |||||    
T  6980242 catccaataaaagagtgagtgctagagagagtgttgaaaagtgaatgttgctagcatttctttt 6980305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 288 - 448
Target Start/End: Original strand, 26767783 - 26767943
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||| | ||||||||||||| ||||| ||||||||||||||| || || | |||||||||| ||||| || ||| || ||| |||||||||| ||     
T  26767783 aacactctatctaatactcactcttttattggtttaaatcattgtgagtctacaatttgaaaattgaaccctcacaaagtggtgggacatacattgattt 26767882  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||| |||||||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  26767883 catccagtaaaagagtaagtgctagagagaatgttgaaaagtgagtgttgctagcattcct 26767943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 288 - 451
Target Start/End: Complemental strand, 38464321 - 38464158
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||| ||||||||||| |||||||||||||||||| || |||||||||||| |||||||  ||| |||||  |||||||||| ||     
T  38464321 aacactctctctaatacttactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacgcaaagtgatgagacatacattgattt 38464222  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcctttt 451  Q
    ||| |||||||| ||||| ||| ||||||| |||| |||||||| ||||  |||||||||||||    
T  38464221 catacaataaaaaagtaattgtcagagagagtgttgaaaagtgaatgttcttagcattcctttt 38464158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 294 - 445
Target Start/End: Complemental strand, 9470233 - 9470082
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcca 393  Q
    |||| ||||| ||||||||||||| |||||||||||||||||| || |||||||||||| |||||| | ||| || ||| |||||||||| || ||||||    
T  9470233 ctctctaatattcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaagtggtgggacatacattgatttcatcca 9470134  T
Q  394 ataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    |||||||||| |||||||||||||  ||| |||| ||||| || ||||||||    
T  9470133 ataaaagagtgagtgttagagagagcgttgaaaaatgagtattgctagcatt 9470082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 281 - 445
Target Start/End: Complemental strand, 3804750 - 3804585
Alignment:
Q  281 tgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgat-ggaacatac 379  Q
    ||||| ||||||||| | ||||||| ||| | |||||| ||||||| |||||||||||| ||||||||||||||||| ||| ||| |||| || ||||||    
T  3804750 tgctagcaacactctttataatacttactattttattaatttaaattattgtgggtgtacactttgaaaattaaacctacataaagtgatggggacatac 3804651  T
Q  380 attgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    |||| || |||||||||||||||| | ||||| ||||| |||| ||||||||||||  ||||||||    
T  3804650 attgatttcatccaataaaagagtgaatgttaaagagagtgttgaaaagtgagtgtagctagcatt 3804585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 288 - 448
Target Start/End: Complemental strand, 12989349 - 12989189
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||| || |||| | ||||  || ||| | ||| || ||| |||||||||| ||     
T  12989349 aacactctctctaatactcactctcttattggtttaaatcattgtgggtctacacttcggaaatagaatccatacaaagtggtgggacatacattgattt 12989250  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||| ||||||| ||||  | ||||| |||| ||||||||||||| |||||||||||    
T  12989249 catccaatgaaagagtgagtgagaaagagagtgttgaaaagtgagtgttgctagcattcct 12989189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 291 - 448
Target Start/End: Original strand, 36471863 - 36472020
Alignment:
Q  291 actctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccat 390  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||| || || | |||||||||| || ||| ||||| || ||  |||||| ||| || |||    
T  36471863 actctctctaatactcactcttttattggtttaaatcattgtgagtttacattttgaaaattgaatccataaaaagtggtgagacatactttgatttcat 36471962  T
Q  391 ccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||| ||| | ||||| ||||||| |||| ||||||||||||||||| |||||||    
T  36471963 ccaataagagattgagtgtcagagagagtgttgaaaagtgagtgttactatcattcct 36472020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 312 - 448
Target Start/End: Original strand, 18511255 - 18511391
Alignment:
Q  312 cttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgtta 411  Q
    |||||| ||||||| |||||| ||| |  |||||||||||| |||||||| |||||  ||| |||||||||| ||  ||||||||||||||| |||| ||    
T  18511255 cttattggtttaaaacattgtaggtcttcactttgaaaattgaacccacataaaatagtgggacatacattgattttatccaataaaagagtgagtgata 18511354  T
Q  412 gagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    | |||| |||||||||||||||||| |||||||||||    
T  18511355 gtgagagtgttaaaaagtgagtgttgctagcattcct 18511391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 289 - 448
Target Start/End: Complemental strand, 11539583 - 11539421
Alignment:
Q  289 acactctctttaatactcactctcttattagtttaaatc-attgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatac--attgct 385  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||| ||| | || |||||||||||  ||| |||| ||| |||||||||||||  |||| |    
T  11539583 acactctctctaatactcactctcttattggtttaaatcaattctggatctacactttgaaaatagaactcacacaaagtgatggaacatacatattgat 11539484  T
Q  386 tccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    | |||||||||||||||| |||| |||| ||| |||| |||| ||||||||  ||||||||||    
T  11539483 ttcatccaataaaagagtgagtgctagaaagagtgttcaaaaatgagtgttgttagcattcct 11539421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 294 - 436
Target Start/End: Complemental strand, 24497344 - 24497202
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcca 393  Q
    |||| |||||||||||||| ||||||||||||||| | | ||| || ||||||||||| ||| ||||| ||||||||||||||||||||  || ||||||    
T  24497344 ctctctaatactcactctcctattagtttaaatcactcttggtctacactttgaaaataaaatccacacaaaatgatggaacatacattagtttcatcca 24497245  T
Q  394 ataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    |||||| ||  | ||||| ||||| || | |||||||||||||    
T  24497244 ataaaaaagcgactgttaaagagagtggtcaaaagtgagtgtt 24497202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 288 - 433
Target Start/End: Complemental strand, 10981676 - 10981531
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||||| || ||||||||||||||||||| |||||||||||||||||| || || ||| ||||  |||||||| ||| || ||| |||||||||  ||     
T  10981676 aacactccctctaatactcactctcttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggtgggacatacattttttt 10981577  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagt 433  Q
    ||| ||||| || ||| ||||||||||||| |||| ||||||||||    
T  10981576 cattcaatagaaaagtgagtgttagagagagtgttcaaaagtgagt 10981531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 289 - 436
Target Start/End: Original strand, 30718350 - 30718496
Alignment:
Q  289 acactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttcc 388  Q
    ||||||||| ||||| ||||| | ||||| ||||||||||||||| || || |||||||||||  || ||||| |||||||||| ||||| || | || |    
T  30718350 acactctctctaatattcacttttttattggtttaaatcattgtgagtctacactttgaaaatacaatccacacaaaatgatgg-acatatatcgatttc 30718448  T
Q  389 atccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    ||||||||||||||| |||  ||||||||||||| |||| ||||||||    
T  30718449 atccaataaaagagtgagtactagagagaatgtttaaaattgagtgtt 30718496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 288 - 446
Target Start/End: Complemental strand, 45554717 - 45554567
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||| ||||| ||||||||||| ||||||| |||||||||||||||||| || |||| |||||||  |        || || ||| |||||||||| ||     
T  45554717 aacattctctctaatactcactttcttattggtttaaatcattgtgggtctacacttggaaaattgca--------aagtggtgggacatacattgattt 45554626  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    |||||||||||||||| |||| |||||||| |||| ||||||||||||| |||||||||    
T  45554625 catccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattc 45554567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 293 - 445
Target Start/End: Complemental strand, 44274387 - 44274236
Alignment:
Q  293 tctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcc 392  Q
    ||||| ||| ||||||||| ||||| |||||||||||||||| | || ||||||||| || |||||||| ||| || ||| |||||||||| ||  ||||    
T  44274387 tctctctaacactcactctgttattggtttaaatcattgtggatctacactttgaaagttgaacccacacaaagtggtgggacatacattgattttatcc 44274288  T
Q  393 aataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    ||| ||||||| | ||||||||||| || |  |||||||||||| ||||||||    
T  44274287 aatgaaagagtgaatgttagagagagtgct-caaagtgagtgttgctagcatt 44274236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 278 - 445
Target Start/End: Original strand, 7919280 - 7919447
Alignment:
Q  278 gaatgctaacaacactctcttt--aatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaac 375  Q
    |||||||| |||||||||||||  |  ||| ||||||||||| |||||||||||||||| | || |||||||||||| || ||||| ||| || ||| ||    
T  7919280 gaatgctagcaacactctcttttgagcacttactctcttattggtttaaatcattgtggatctacactttgaaaattgaatccacacaaagtggtgggac 7919379  T
Q  376 atacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    ||  |||| ||  |||| || | ||||||||| ||||||  |||||| ||||||||||||| ||||||||    
T  7919380 at--attgattgtatcccatgagagagtaagtattagaggaaatgttcaaaagtgagtgttgctagcatt 7919447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 445
Target Start/End: Original strand, 16719461 - 16719609
Alignment:
Q  297 tttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaata 396  Q
    ||||||||||| | |  |||| ||||||||||||| |||| || | |||||||||| |||| |||  ||||| ||| | |||||||| || |||| ||||    
T  16719461 tttaatactcatttttgtattggtttaaatcattgcgggtctacattttgaaaattgaacctacatgaaatggtgggatatacattgatttcatctaata 16719560  T
Q  397 aaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    |||||||| ||| || ||| | |||| ||||||||||||| ||||||||    
T  16719561 aaagagtatgtgctaaagacagtgttgaaaagtgagtgttgctagcatt 16719609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 290 - 361
Target Start/End: Original strand, 472187 - 472258
Alignment:
Q  290 cactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccaca 361  Q
    ||||||||||||||||| |||||||||| |||||||||||||||| | |||| |||||||||| ||| ||||    
T  472187 cactctctttaatactcgctctcttattggtttaaatcattgtggatatatattttgaaaattgaactcaca 472258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 341 - 448
Target Start/End: Complemental strand, 15509019 - 15508912
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    |||||| ||||  ||||||||||||||| ||| |||||||||| || ||  |||||||||||| ||||||||| ||| |||| ||||| ||||||| |||    
T  15509019 actttggaaatggaacccacaaaaaatggtgggacatacattgatttcactcaataaaagagtgagtgttagaaagagtgttcaaaagagagtgttgcta 15508920  T
Q  441 gcattcct 448  Q
     |||||||    
T  15508919 acattcct 15508912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 295 - 446
Target Start/End: Original strand, 34142168 - 34142319
Alignment:
Q  295 tctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaa 394  Q
    ||||||||| ||||||||||||| ||||||| |||||||  | || |||||||||||| |||||||| ||| |  ||  ||||||||   || |||||||    
T  34142168 tctttaatattcactctcttattggtttaaaccattgtgactctacactttgaaaattgaacccacacaaagtagtgagacatacatgaatttcatccaa 34142267  T
Q  395 taaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    ||||| ||| | |||| |||||| |||| |||||| |||||| ||| |||||    
T  34142268 taaaaaagtgaatgtttgagagattgttgaaaagtaagtgttgctaacattc 34142319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 338 - 448
Target Start/End: Complemental strand, 1110306 - 1110196
Alignment:
Q  338 tatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtta 437  Q
    ||||||||| ||||  |||||||| ||| || ||| |||||||||| || ||  |||||||||||| |||||||||||||||| |  |||| |||||||     
T  1110306 tatactttggaaatggaacccacataaagtggtgggacatacattgatttcactcaataaaagagtgagtgttagagagaatgctcgaaagagagtgttg 1110207  T
Q  438 ctagcattcct 448  Q
    |||||||||||    
T  1110206 ctagcattcct 1110196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 294 - 432
Target Start/End: Complemental strand, 19639245 - 19639107
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcca 393  Q
    |||| ||||| ||||||||||||| |||||||||||||| ||| |  |||||||||||| ||| ||||  |  |||||  |||||||||| || |||| |    
T  19639245 ctctataatattcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaactcacactatgtgatgagacatacattgatttcatcta 19639146  T
Q  394 ataaaagagtaagtgttagagagaatgttaaaaagtgag 432  Q
    |||||| ||| | || | |||||| ||||||||||||||    
T  19639145 ataaaatagtgaatgctggagagagtgttaaaaagtgag 19639107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 294 - 432
Target Start/End: Complemental strand, 19837838 - 19837700
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcca 393  Q
    |||| ||||| ||||||||||||| |||||||||||||| ||| |  |||||||||||| ||| ||||  |  |||||  |||||||||| || |||| |    
T  19837838 ctctataatattcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaactcacactatgtgatgagacatacattgatttcatcta 19837739  T
Q  394 ataaaagagtaagtgttagagagaatgttaaaaagtgag 432  Q
    |||||| ||| | || | |||||| ||||||||||||||    
T  19837738 ataaaatagtgaatgctggagagagtgttaaaaagtgag 19837700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 291 - 448
Target Start/End: Original strand, 28898061 - 28898219
Alignment:
Q  291 actctctttaatactcactctcttattagtttaaatcattgtggg-tgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttcca 389  Q
    ||||||||||  ||||||||| ||||| | | |||||| ||| || | || |||||| |||| ||||||||| ||| || ||| |||||||||| || ||    
T  28898061 actctctttagcactcactcttttattggatgaaatcaatgtaggatctacactttggaaatgaaacccacataaagtggtgggacatacattgatttca 28898160  T
Q  390 tccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
     ||||||||||||| |||| |||||||| || | ||||  ||||||| |||||||||||    
T  28898161 cccaataaaagagtgagtgctagagagagtgctcaaaaaagagtgttgctagcattcct 28898219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 299 - 448
Target Start/End: Original strand, 32856168 - 32856321
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||||||| ||||||||| |||||||||| | ||| | || |||||||||||| |||||||| ||| || || |||||| |||  || ||||| |||||    
T  32856168 taatactcaatctcttattggtttaaatcactatggatctacactttgaaaattcaacccacacaaagtggtgaaacatatattaatttcatccgataaa 32856267  T
Q  399 agagtaagtg----ttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||| ||||     | |||||| |||| |||||||||||||  ||||||||||    
T  32856268 agagtcagtgcgtactggagagagtgttcaaaagtgagtgttgttagcattcct 32856321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 12098894 - 12098953
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatca-ttgtgggtgtatactttgaaaatt 352  Q
    ||||||||||||||||||||||||||||||||||| ||||| || || ||||||||||||    
T  12098894 ctctttaatactcactctcttattagtttaaatcatttgtgagtttacactttgaaaatt 12098953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 341 - 446
Target Start/End: Complemental strand, 42182994 - 42182889
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    |||||| ||||  |||||||| ||| || ||| |||||||||| || || ||||||||||||| |||| |||||||| || | ||||| ||||||| |||    
T  42182994 actttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgcta 42182895  T
Q  441 gcattc 446  Q
    ||||||    
T  42182894 gcattc 42182889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 11445454 - 11445406
Alignment:
Q  32 gcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    |||||||||||| |||| |||||||||||||||||||| ||||||||||    
T  11445454 gcaatggttaaggaaaccaaaagtaacatgtttgcattggtttcaacaa 11445406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 25730470 - 25730602
Alignment:
Q  297 tttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaata 396  Q
    ||||||| ||||||| ||||| |||||||||| |||| || || || || |||||  |||||||| || ||| ||  ||||||||   ||||||||||||    
T  25730470 tttaatattcactcttttattggtttaaatcactgtgagtttacacgttaaaaatagaacccacataatatggtgagacatacatgtattccatccaata 25730569  T
Q  397 aaagagtaagtgttagagagaatgttaaaaagt 429  Q
    ||| ||| ||||||||| ||| |||| ||||||    
T  25730570 aaaaagtgagtgttagaaagagtgttcaaaagt 25730602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 399
Target Start/End: Original strand, 27494484 - 27494584
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||||||||||| |||||  |||||||||||| |||| ||| ||||||||| | |||| | | ||| || ||||||| |||||| || |||||||||||    
T  27494484 taatactcactcttttattgatttaaatcattgcgggtctatgctttgaaaagtgaacctatataaattggtggaacaaacattgatttcatccaataaa 27494583  T
Q  399 a 399  Q
    |    
T  27494584 a 27494584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 448
Target Start/End: Complemental strand, 37398869 - 37398809
Alignment:
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||||||| |||||||||||||||||||| | ||||  ||||||| |||||||||||    
T  37398869 catccaataaaaaagtaagtgttagagagaatgctcaaaaaagagtgttgctagcattcct 37398809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 407
Target Start/End: Complemental strand, 43414502 - 43414394
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    |||||||||| ||||| || |||||||||||||||| | |||||| |||||||   ||  ||  |||||| | |||||||||||| || |||||||||||    
T  43414502 taatactcaccctcttcttggtttaaatcattgtggatctatactctgaaaatagcacttacgcaaaatggtagaacatacattgatttcatccaataaa 43414403  T
Q  399 agagtaagt 407  Q
    | |||||||    
T  43414402 aaagtaagt 43414394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 2476606 - 2476534
Alignment:
Q  374 acatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||||| ||  ||| |||||||||||||||| ||||||  ||||| |||||||||||||| ||||||||||    
T  2476606 acatacattgattttatctaataaaagagtaagtgctagaga--atgttgaaaagtgagtgttagtagcattcct 2476534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 4552875 - 4552925
Alignment:
Q  301 atactcactctcttattagtttaaatcattgtgggtgtatactttgaaaat 351  Q
    ||||||||||||||||| |||||||||||||||||| || || ||||||||    
T  4552875 atactcactctcttattggtttaaatcattgtgggtctacacattgaaaat 4552925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 403
Target Start/End: Original strand, 35316436 - 35316538
Alignment:
Q  301 atactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaag 400  Q
    |||||||||||||||||  ||||||||||||||||| || | ||| |||||| || | ||| |||||| ||| |||||||||  ||  ||| ||||||||    
T  35316436 atactcactctcttattgatttaaatcattgtgggtctacaatttaaaaattgaatcaacataaaatggtgggacatacattaattttatctaataaaag 35316535  T
Q  401 agt 403  Q
    |||    
T  35316536 agt 35316538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 375 - 448
Target Start/End: Original strand, 33678224 - 33678297
Alignment:
Q  375 catacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||||| || ||| |||| ||||| ||||||||| | ||| |||| ||||||||||||| |||||||||||    
T  33678224 catacattgatttcattcaattaaagaataagtgttataaagagtgttcaaaagtgagtgttgctagcattcct 33678297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 2966511 - 2966562
Alignment:
Q  29 agggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    ||||||||||||||| || ||||||||| ||| |||||||| ||||||||||    
T  2966511 agggcaatggttaaggaagctaaaagtagcatatttgcattggtttcaacaa 2966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 448
Target Start/End: Original strand, 4964748 - 4964855
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    ||||||||||| ||| ||||| ||| || ||| |||||||||| || || ||||||||| ||| |||| |||||||| |  | ||||| || |||| |||    
T  4964748 actttgaaaatgaaatccacataaagtggtgggacatacattgatttcacccaataaaaaagtgagtgctagagagagtactcaaaagagaatgttgcta 4964847  T
Q  441 gcattcct 448  Q
    ||||||||    
T  4964848 gcattcct 4964855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 6999173 - 6999224
Alignment:
Q  29 agggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    ||||||||||||||| || | ||||||| |||||||||||| ||||||||||    
T  6999173 agggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaa 6999224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 448
Target Start/End: Original strand, 42183003 - 42183074
Alignment:
Q  377 tacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||| || || ||||||||||||| ||||   |||||| |||| ||||| |||||||||||||||||||    
T  42183003 tacattgatttcacccaataaaagagttagtgccggagagagtgttcaaaagagagtgttactagcattcct 42183074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 451
Target Start/End: Original strand, 45270603 - 45270740
Alignment:
Q  313 ttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttag 412  Q
    ||||| ||||||||||||||| || || ||||| |||||  ||  |||| |||||  ||  |||||||||  ||  ||||||||||| |||| |||||||    
T  45270603 ttattggtttaaatcattgtgagtttacactttcaaaatcgaattcacacaaaatagtgatacatacattaattttatccaataaaaaagta-gtgttag 45270701  T
Q  413 agagaatgttaaaaagtgagtgttactagcattcctttt 451  Q
    ||| |||||| |||||||| ||||  |||||||| ||||    
T  45270702 agaaaatgttgaaaagtgaatgttgatagcattcatttt 45270740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 383
Target Start/End: Original strand, 25238314 - 25238395
Alignment:
Q  303 actcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaa-aaatgatggaacatacattg 383  Q
    ||||||| | ||||| |||||||||||||||| | || |||||||||||  |||||||||| || |||||  ||||||||||    
T  25238314 actcacttttttattggtttaaatcattgtggatctacactttgaaaatagaacccacaaagaagtgatgagacatacattg 25238395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 27495215 - 27495256
Alignment:
Q  147 ccccttattcaatgccccaagagcaatgattaacattctcct 188  Q
    ||||||||||||||||||||| |||||| ||| |||||||||    
T  27495215 ccccttattcaatgccccaagtgcaatggttagcattctcct 27495256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 448
Target Start/End: Original strand, 44274361 - 44274418
Alignment:
Q  391 ccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||| ||||| ||||||||||||||| || ||||| |||||||  ||||||||||    
T  44274361 ccaataacagagtgagtgttagagagaatatttaaaagagagtgttgttagcattcct 44274418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 4023358 - 4023398
Alignment:
Q  147 ccccttattcaatgccccaagagcaatgattaacattctcc 187  Q
    |||||||||||||||||||||  ||||| ||||||||||||    
T  4023358 ccccttattcaatgccccaaggacaatggttaacattctcc 4023398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 19953521 - 19953577
Alignment:
Q  389 atccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    ||||||||||| ||| ||| || |||| |||||||||||| ||||||| ||||||||    
T  19953521 atccaataaaaaagtgagtattggagaaaatgttaaaaagagagtgttgctagcatt 19953577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 30849392 - 30849284
Alignment:
Q  291 actctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccat 390  Q
    ||||| |||||||| |||| |||||||  ||||||||||||||| | ||| |||| |||||  |||||| | ||| || ||| || ||||||| || |||    
T  30849392 actctttttaatacgcactttcttattgatttaaatcattgtggatttatcctttaaaaatagaacccatacaaattggtgggacgtacattgatttcat 30849293  T
Q  391 ccaataaaa 399  Q
    | |||||||    
T  30849292 ctaataaaa 30849284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 5e-39; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 274 - 448
Target Start/End: Original strand, 12263444 - 12263618
Alignment:
Q  274 aaaggaatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatgga 373  Q
    |||| ||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||| || |||||||||||| | || ||| ||| ||||||     
T  12263444 aaagtaatgctaacaacactctctctaatactcactatcttattggtttaaatcattgtgggtctacactttgaaaattgatcctacacaaagtgatggg 12263543  T
Q  374 acatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||||| |||||||| ||||||||||   || |||||||| |||| |||||| |||||| ||||| |||||    
T  12263544 acatacattgattccatccgataaaagagtggatgatagagagagtgttgaaaagtaagtgttgctagcgttcct 12263618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 279 - 448
Target Start/End: Original strand, 31502479 - 31502646
Alignment:
Q  279 aatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacata 378  Q
    ||||||| ||||||||||||| | ||  ||||||||||| ||||||||||||||| || || |||||||||||| ||| |||| |||||| ||| |||||    
T  31502479 aatgctagcaacactctcttttaaac--actctcttattggtttaaatcattgtgagtctacactttgaaaattgaacgcacacaaaatggtgggacata 31502576  T
Q  379 cattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    | ||| || |||||||||||||||| ||||||||||||| |||| ||||||||||||| |||||||||||    
T  31502577 ccttgatttcatccaataaaagagtgagtgttagagagactgttgaaaagtgagtgttgctagcattcct 31502646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 288 - 436
Target Start/End: Complemental strand, 27949431 - 27949283
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||| || ||| |||| |||||| | | |||||  ||| ||     
T  27949431 aacactctctctaatactcactctcttattagtttaaatcattgtgggtctacactttgaaatttgaactcacacaaaatggtaggacataacttgattt 27949332  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||||||    
T  27949331 catccaatacaagagtgagtgttagagagagtgttaaaaagtgagtgtt 27949283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 288 - 446
Target Start/End: Complemental strand, 14795289 - 14795131
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| | |||||||||||||||||||||||||||||| ||| | || ||||| |||||| |||| ||||||| || ||| |||||||||| ||     
T  14795289 aacactctctcttatactcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaacaaaaattggtgggacatacattgattt 14795190  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    |||||||||||| ||| | || |||||||| |||| ||||||||||||| |||||||||    
T  14795189 catccaataaaaaagtgactgatagagagagtgttgaaaagtgagtgttgctagcattc 14795131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 288 - 446
Target Start/End: Complemental strand, 15242281 - 15242123
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| | |||||||||||||||||||||||||||||| ||| | || ||||| |||||| |||| ||||||| || ||| |||||||||| ||     
T  15242281 aacactctctcttatactcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaacaaaaattggtgggacatacattgattt 15242182  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    |||||||||||| ||| | || |||||||| |||| ||||||||||||| |||||||||    
T  15242181 catccaataaaaaagtgactgatagagagagtgttgaaaagtgagtgttgctagcattc 15242123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 288 - 448
Target Start/End: Complemental strand, 22190097 - 22189937
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||| |||| ||||||||||||  ||||| ||||||||||||| |||| || |||||||||||| |||||||| ||| || |||  ||||||||| ||     
T  22190097 aacaccctctctaatactcactcgtttattggtttaaatcattgcgggtctacactttgaaaattgaacccacacaaagtggtgggccatacattgattt 22189998  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||||||||||| |||| |||||||| |||| |||| |||||||| |||||||||||    
T  22189997 catccaataaaagagtgagtgctagagagagtgttgaaaaatgagtgtttctagcattcct 22189937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 294 - 448
Target Start/End: Complemental strand, 32205228 - 32205077
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcca 393  Q
    |||| |||||||||||||||||||||||||||||||||| |   |||||||| |||||| |||||||| |||||| | | |||||||||| || ||||||    
T  32205228 ctctctaatactcactctcttattagtttaaatcattgtagacctatactttaaaaattgaacccacacaaaatggtaggacatacattgatttcatcca 32205129  T
Q  394 ataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||||| ||   |||||||| |||| ||||||||||||| |||||||||||    
T  32205128 ataaaagagtgag---tagagagagtgttcaaaagtgagtgttgctagcattcct 32205077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 290 - 448
Target Start/End: Complemental strand, 27888438 - 27888280
Alignment:
Q  290 cactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttcca 389  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||||| || ||||| |||||| |||||||| ||| || ||| |||||||||| ||  |    
T  27888438 cactctctctaacactcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatacattgatttta 27888339  T
Q  390 tccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||| | || || ||||||||||||| || | ||||||||||||| |||||||||||    
T  27888338 tccaatgagagggtgagtgttagagagagtgctcaaaagtgagtgttgctagcattcct 27888280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 288 - 436
Target Start/End: Complemental strand, 6442323 - 6442175
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||||| || |||||||||||| || || || |||||| |||||||||||||| ||     
T  6442323 aacactatctttaatactcactcttttattggtttaaatcattgtgggtctacactttgaaaattgaatccccacaaaatggtggaacatacattgattt 6442224  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    ||| ||||||| || | |||| |||||||| |||| |||| ||||||||    
T  6442223 catacaataaatgactgagtgatagagagagtgttgaaaaatgagtgtt 6442175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 294 - 445
Target Start/End: Complemental strand, 11824223 - 11824072
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcca 393  Q
    |||| ||||||||||| |||||||  ||||||||||||||||| || |||||||||||| || | ||| |||||| ||| |||||||||| || ||||||    
T  11824223 ctctctaatactcactttcttattgatttaaatcattgtgggtttacactttgaaaattgaagctacacaaaatggtgggacatacattgatttcatcca 11824124  T
Q  394 ataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    |||||||||| |||| ||||||||  ||| |||| |||||||| ||| ||||    
T  11824123 ataaaagagtgagtgctagagagagcgttgaaaaatgagtgttgctaacatt 11824072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 298 - 448
Target Start/End: Complemental strand, 33008252 - 33008102
Alignment:
Q  298 ttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataa 397  Q
    ||||||||| |||| ||||| |||||||||||||||||| || || ||| ||||  |||||||| ||| || ||| ||||||| || || ||||||||||    
T  33008252 ttaatactctctcttttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggtgggacatacaatgatttcatccaataa 33008153  T
Q  398 aagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||| |||| |||||| | |||| ||||||||||||| |||||||||||    
T  33008152 aagagtgagtgctagagatagtgttcaaaagtgagtgttgctagcattcct 33008102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 291 - 436
Target Start/End: Complemental strand, 7459498 - 7459353
Alignment:
Q  291 actctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccat 390  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||| | |||| |||||||||| | | |||| ||| || ||||| |||||||| ||  ||    
T  7459498 actctctttaatactcactcttttattggtttaaattattgtggatctatattttgaaaattgagctcacataaagtggtggaatatacattgattttat 7459399  T
Q  391 ccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    | ||||||||| | ||| ||| ||||||||||||||||||||||||    
T  7459398 cgaataaaagaatgagtattatagagaatgttaaaaagtgagtgtt 7459353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 294 - 446
Target Start/End: Complemental strand, 46517443 - 46517293
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcca 393  Q
    |||| ||||||||| ||||||||| ||||||||||||||| || || |||||||||||| ||||| || | |||| ||| | |||||||| ||  |||||    
T  46517443 ctctctaatactcattctcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacagaatggtgggatatacattgattttatcca 46517344  T
Q  394 ataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    ||||| |||| |||| |||||||  |||||||||||||||||| |||||||||    
T  46517343 ataaatgagtgagtgctagagag--tgttaaaaagtgagtgttgctagcattc 46517293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 288 - 445
Target Start/End: Complemental strand, 39254241 - 39254084
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||||||| |||||||||||||||  ||||||| ||||||||| || | ||| |||||| |||| ||| ||| || || ||||||||||  ||     
T  39254241 aacactctctttaacactcactctcttattgatttaaattattgtgggtctacattttaaaaattgaaccaacacaaagtggtgaaacatacattaattt 39254142  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
     || |||||||||||| |||| || |||||||||| |||||||| |||| ||||||||    
T  39254141 tattcaataaaagagtgagtgctatagagaatgttgaaaagtgaatgttgctagcatt 39254084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 299 - 446
Target Start/End: Original strand, 32212903 - 32213049
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||||||||||||||||| |||||||||||||||||  || | ||| |||||| ||| || | ||| |  ||  |||||||||| || |||||||||||    
T  32212903 taatactcactctcttattggtttaaatcattgtgggc-tacattttaaaaattgaacacatacaaagtagtgagacatacattgatttcatccaataaa 32213001  T
Q  399 agagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    |||   |||| |||||||| ||||||||||||||||||||||||||||    
T  32213002 agatagagtgctagagagagtgttaaaaagtgagtgttactagcattc 32213049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 288 - 416
Target Start/End: Complemental strand, 11692337 - 11692209
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||| |||| |||||||||||||| ||||||||||||||| |||| || || |||||||||||| |||| ||| ||| || | | |||||||||| ||     
T  11692337 aacacactctctaatactcactctcatattagtttaaatcactgtgagtttacactttgaaaattgaacctacacaaagtggtaggacatacattgattt 11692238  T
Q  388 catccaataaaagagtaagtgttagagag 416  Q
    |||||||||||||||| | | ||||||||    
T  11692237 catccaataaaagagtgaatattagagag 11692209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 288 - 447
Target Start/End: Original strand, 48374461 - 48374618
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| |||||||||||||||| || |||||||| |||||| || || |||||| ||||  |||||| | ||| || ||| |||| |||   |||    
T  48374461 aacactctctctaatactcactctcttgttggtttaaattattgtgagtatacactttggaaatagaacccatagaaagtggtgggacatgcatgaattc 48374560  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcc 447  Q
    ||| |||||||||||| |||  |||||||  |||| ||||||||||||| ||||||||||    
T  48374561 cattcaataaaagagtgagtactagagag--tgttcaaaagtgagtgttgctagcattcc 48374618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 288 - 427
Target Start/End: Complemental strand, 7775157 - 7775019
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||| |||||| |||||| |||||||||||| ||| |  | |||||||||||| ||| |||| ||| || ||| |||||||||| ||     
T  7775157 aacactctctctaatattcactcacttatttgtttaaatcattctgg-tccacactttgaaaattgaactcacacaaagtggtgggacatacattgattt 7775059  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaa 427  Q
    |||||||||||||||| |||| || ||||| |||| ||||    
T  7775058 catccaataaaagagtgagtgctatagagagtgttgaaaa 7775019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 12167374 - 12167317
Alignment:
Q  279 aatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggt 336  Q
    |||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  12167374 aatgttaacaacactctctttaatactcactttcttattggtttaaatcattgtgggt 12167317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 292 - 351
Target Start/End: Original strand, 10933991 - 10934050
Alignment:
Q  292 ctctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaat 351  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  10933991 ctctttttaatactcaatctcttattagtttaaatcattgtgggtttatactttggaaat 10934050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 357
Target Start/End: Original strand, 6580024 - 6580093
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacc 357  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||||||  ||| |||||||||| ||||    
T  6580024 aacactctctctaatactcactctcttattggtttaaattattgtgggtccatattttgaaaattgaacc 6580093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 299 - 399
Target Start/End: Original strand, 25686868 - 25686968
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||||||| | ||||||| |||||||||||||||||| || |||||||||||| |||||| ||||| || |   |||||||||| || |||| ||||||    
T  25686868 taatactcattatcttattggtttaaatcattgtgggtctacactttgaaaattgaacccataaaaagtggtatgacatacattgatttcatcaaataaa 25686967  T
Q  399 a 399  Q
    |    
T  25686968 a 25686968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 448
Target Start/End: Original strand, 17354602 - 17354709
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    |||||| ||||  |||||||| ||| || ||| |||||||||| || |||||||||||||| | ||||||||||||| || | ||||  ||||||| |||    
T  17354602 actttggaaatagaacccacataaagtggtgggacatacattgatttcatccaataaaagaatgagtgttagagagagtgctcaaaaaagagtgttgcta 17354701  T
Q  441 gcattcct 448  Q
    ||||||||    
T  17354702 gcattcct 17354709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 29034658 - 29034709
Alignment:
Q  29 agggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    |||||||||||||||||| | ||||||| |||||||||||||||||||||||    
T  29034658 agggcaatggttaagaaagccaaaagtagcatgtttgcattagtttcaacaa 29034709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 446
Target Start/End: Original strand, 32178826 - 32178981
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||| ||||| | ||| |||||||||||||  |||||||||||||| || || |||||||||||| ||   | | | | || |||||||||||||  ||     
T  32178826 aacaatctctctgataatcactctcttattgatttaaatcattgtgtgtatacactttgaaaattgaataaa-acagagtggtggaacatacattaattt 32178924  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    |||||||||||| |||||||| |||||||  |||| |||||||| | ||||||||||||    
T  32178925 catccaataaaatagtaagtgctagagag--tgttgaaaagtgaattttactagcattc 32178981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 42222192 - 42222243
Alignment:
Q  29 agggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    ||||||||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  42222192 agggcaatggttaaggaaactaaaagtaacatgtttgtattggtttcaacaa 42222243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 36845567 - 36845617
Alignment:
Q  311 tcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccaca 361  Q
    ||||||| |||||||||||||||||| ||||||||||||||| ||||||||    
T  36845567 tcttattggtttaaatcattgtgggtctatactttgaaaattgaacccaca 36845617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 446
Target Start/End: Original strand, 19422942 - 19423014
Alignment:
Q  374 acatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    |||||||||| || |||||||| ||||||| |||| |||||||| |||| ||||||||||||| ||| |||||    
T  19422942 acatacattgatttcatccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttgctaacattc 19423014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 345 - 448
Target Start/End: Original strand, 8073367 - 8073470
Alignment:
Q  345 tgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcat 444  Q
    |||||||| |||  ||| ||| || ||| |||||||||| || ||||| |||||||||| |||| |||  |||||||| |||| ||||||||||||| ||    
T  8073367 tgaaaattgaacttacacaaagtggtgggacatacattgatttcatccgataaaagagtgagtgctaggaagaatgttgaaaaatgagtgttactagtat 8073466  T
Q  445 tcct 448  Q
    ||||    
T  8073467 tcct 8073470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 429
Target Start/End: Original strand, 44350835 - 44350965
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||||||||||| || || ||||||||||||||| || || |||||||||||| |||| | | ||| ||| |  |||||||||| ||  ||||||||||    
T  44350835 taatactcactcttttgttggtttaaatcattgtgagtctacactttgaaaattgaacctaaacaaagtgacgagacatacattgatttgatccaataaa 44350934  T
Q  399 agagtaagtgttagagagaatgttaaaaagt 429  Q
    | |||   ||||||||| | |||| ||||||    
T  44350935 aaagtggatgttagagaaagtgttgaaaagt 44350965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 3855851 - 3855916
Alignment:
Q  307 actctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatgg 372  Q
    ||||| ||||| |||||||||||||| ||| |  |||||||||||| |||||||| ||||||||||    
T  3855851 actcttttattggtttaaatcattgtaggtctgaactttgaaaattgaacccacataaaatgatgg 3855916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 289 - 417
Target Start/End: Complemental strand, 17749852 - 17749723
Alignment:
Q  289 acactctctttaatactcactctcttattagtttaaatcattgtgggtg-tatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||||||| ||| ||||||||||| ||| | |||||||| |||||||  || | |||| |||| ||| ||| | ||| || ||| ||||| |||| ||     
T  17749852 acactctctctaacactcactctctcattgggttaaatcaatgtgggtcatacattttggaaatgaaatccatataaagtggtgggacatatattgattt 17749753  T
Q  388 catccaataaaagagtaagtgttagagaga 417  Q
     ||||||||||||||| |||||||||||||    
T  17749752 tatccaataaaagagtgagtgttagagaga 17749723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 289 - 445
Target Start/End: Original strand, 24539145 - 24539302
Alignment:
Q  289 acactctctttaatactcactctcttattagtttaaatcattgtgggtg-tatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||||||| ||| ||||||||||| ||| | |||||||| |||||||  || | |||| ||||  || ||| | ||| || ||| ||||| |||| ||     
T  24539145 acactctctctaacactcactctctcattgggttaaatcaatgtgggtcatacattttggaaatggaatccatataaagtggtgggacatatattgattt 24539244  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
     ||||||||||||||| ||||||||||||| |||  ||||| ||||||  ||||||||    
T  24539245 tatccaataaaagagtgagtgttagagagagtgtccaaaagagagtgtcgctagcatt 24539302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 445
Target Start/End: Complemental strand, 13919885 - 13919781
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    |||||||||||  |||||||| ||| || ||| |||||||||| || || |||||||| |||  |||| |||||||| || | ||||| ||||||| |||    
T  13919885 actttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaatgagcgagtgctagagagagtgctcaaaagagagtgttgcta 13919786  T
Q  441 gcatt 445  Q
    |||||    
T  13919785 gcatt 13919781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 44511014 - 44511106
Alignment:
Q  344 ttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    ||||||||| ||| || | ||| |||||  |||||||||| || |||||||||||| ||| |||| |||||||| |||| |||||| ||||||    
T  44511014 ttgaaaattgaacacagacaaagtgatgagacatacattgatttcatccaataaaaaagtgagtgctagagagagtgttgaaaagtaagtgtt 44511106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 26703548 - 26703620
Alignment:
Q  374 acatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||||| || || ||||||||||||| |||| ||||||||||| | ||||  ||||||| |||||||||||    
T  26703548 acatacattgatttcacccaataaaagagtgagtgctagagagaatgctcaaaa--gagtgttgctagcattcct 26703620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 32943838 - 32943885
Alignment:
Q  287 caacactctctttaatactcactctcttattagtttaaatcattgtgg 334  Q
    ||||||||||| |||||| |||| ||||||||||||| ||||||||||    
T  32943838 caacactctctctaatacccactatcttattagtttatatcattgtgg 32943885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 448
Target Start/End: Original strand, 42863573 - 42863616
Alignment:
Q  405 agtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||    
T  42863573 agtgttagagagagtgtttaaaagtgagtgttgctagcattcct 42863616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 7775002 - 7774956
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgg 334  Q
    |||||||||| ||||| | ||||||||||| ||||||||||||||||    
T  7775002 aacactctctctaatatttactctcttattggtttaaatcattgtgg 7774956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 31874183 - 31874129
Alignment:
Q  279 aatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtg 333  Q
    |||||||  ||||||||||  |||||||||||||||||  |||||||||||||||    
T  31874183 aatgctagtaacactctctcgaatactcactctcttataggtttaaatcattgtg 31874129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 49069531 - 49069577
Alignment:
Q  34 aatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    |||||||||| |||| |||||||||||||||| ||| ||||||||||    
T  49069531 aatggttaaggaaaccaaaagtaacatgtttgtattggtttcaacaa 49069577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 448
Target Start/End: Complemental strand, 2520688 - 2520631
Alignment:
Q  391 ccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||||||||| |||||| |||||| |||| ||||| ||||||| |||||| ||||    
T  2520688 ccaataaaagagtgagtgttggagagagtgttgaaaagagagtgttcctagcactcct 2520631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 448
Target Start/End: Original strand, 27888409 - 27888466
Alignment:
Q  391 ccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||| ||||| ||||||||||||| || | ||||| ||||||| |||||||||||    
T  27888409 ccaataagagagtgagtgttagagagagtgctcaaaagagagtgttgctagcattcct 27888466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 30742664 - 30742717
Alignment:
Q  395 taaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||||| | |||||| ||||||||| |||||||| |||| |||||||||||    
T  30742664 taaaagagtgaatgttagggagaatgttcaaaagtgaatgttgctagcattcct 30742717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 31628157 - 31628116
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcat 329  Q
    |||||| ||||||||||| ||||||||||| |||||||||||    
T  31628157 aacactatctttaatacttactctcttattggtttaaatcat 31628116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 36279094 - 36279143
Alignment:
Q  30 gggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaaca 79  Q
    |||||||||||||||||   ||||||| ||||||||||||| ||||||||    
T  36279094 gggcaatggttaagaaaggcaaaagtagcatgtttgcattaatttcaaca 36279143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 336
Target Start/End: Original strand, 36845516 - 36845561
Alignment:
Q  291 actctctttaatactcactctcttattagtttaaatcattgtgggt 336  Q
    |||||||  |||| ||||||||||||| ||||||||||||||||||    
T  36845516 actctctagaatattcactctcttattggtttaaatcattgtgggt 36845561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 448
Target Start/End: Complemental strand, 37549679 - 37549622
Alignment:
Q  391 ccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||||||||||||| |||||| | || | ||||| ||||||| |||||||||||    
T  37549679 ccaataaaagagtaagtgctagagaaagtgctcaaaagagagtgttgctagcattcct 37549622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 449
Target Start/End: Complemental strand, 22786256 - 22786148
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    |||||| ||||  |||||||| ||| || ||  |||||||||| || || | ||||||| ||| |||| |||||||| || | ||||| ||||||| |||    
T  22786256 actttggaaatggaacccacataaagtggtgagacatacattgatttcacctaataaaaaagtgagtgctagagagagtgctcaaaagagagtgttgcta 22786157  T
Q  441 gcattcctt 449  Q
    |||||||||    
T  22786156 gcattcctt 22786148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 34281052 - 34281104
Alignment:
Q  393 aataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    |||||||||  ||||||||||||||||||| ||||| |||||||  |||||||    
T  34281052 aataaaagaacaagtgttagagagaatgttcaaaagagagtgttgatagcatt 34281104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 435
Target Start/End: Original strand, 43930085 - 43930129
Alignment:
Q  391 ccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgt 435  Q
    ||||||||||||| ||||||||||||| ||||| |||| ||||||    
T  43930085 ccaataaaagagtgagtgttagagagagtgttagaaagagagtgt 43930129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 443
Target Start/End: Original strand, 45909584 - 45909636
Alignment:
Q  391 ccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagca 443  Q
    ||||||||||||| ||||||||||||| | || ||||| ||||||| ||||||    
T  45909584 ccaataaaagagtgagtgttagagagagtattcaaaagagagtgttgctagca 45909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 5e-39; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 288 - 446
Target Start/End: Complemental strand, 43771284 - 43771126
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||| || |||||||||||| |||||||| | | || ||| |||||||||| ||     
T  43771284 aacaccctctttaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacacagagtggtgggacatacattgattt 43771185  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    |||||||||||||||| |||  |||||||| |||| ||||||||||||| ||| |||||    
T  43771184 catccaataaaagagtgagtcatagagagagtgttcaaaagtgagtgttgctaccattc 43771126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 292 - 445
Target Start/End: Complemental strand, 24834732 - 24834579
Alignment:
Q  292 ctctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatc 391  Q
    |||||| ||||| ||||||||||||| |||||||| ||||||||| || |||||||||||| |||||||| |||||| ||| |||||||||| |||||||    
T  24834732 ctctctctaatagtcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacccacacaaaatggtgggacatacattgattccatc 24834633  T
Q  392 caataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    ||||||||  || || |||||||||| ||| |||||||||||||| ||||||||    
T  24834632 caataaaaatgtgagcgttagagagagtgtcaaaaagtgagtgttgctagcatt 24834579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 288 - 448
Target Start/End: Complemental strand, 50164553 - 50164393
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| |||| |||||| ||||||| ||||||||||||||| || || |||||||||||| ||||| || |||||| ||| | |||||||| ||     
T  50164553 aacactctctctaatgctcactttcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacaaaatggtgggagatacattgattt 50164454  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
     |||||||||| |||| |||| |||||||| ||||||||||||||||||||||| ||||||    
T  50164453 tatccaataaatgagtgagtgctagagagagtgttaaaaagtgagtgttactagtattcct 50164393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 288 - 445
Target Start/End: Complemental strand, 8109114 - 8108957
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||| || |||||||||||| |||  ||| ||| |  ||| |||||||||| ||     
T  8109114 aacactctctctaatactcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacaaacacaaattagtgggacatacattgattt 8109015  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    || ||||||||||||| |||| |||||||| |||| ||||||||||||| ||||||||    
T  8109014 cacccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcatt 8108957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 288 - 448
Target Start/End: Complemental strand, 39471315 - 39471155
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||| ||||| ||||||||||||||||||| |||||||||||||||||| || |||||||| ||| |||| ||| ||| || ||| |||||||||| ||     
T  39471315 aacattctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaagattgaaccaacacaaagtggtgggacatacattgattt 39471216  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||| |||||||||||  |||||| ||||| | || ||||||||||||| |||||||||||    
T  39471215 catctaataaaagagttggtgttaaagagagtatttaaaagtgagtgttgctagcattcct 39471155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 288 - 404
Target Start/End: Complemental strand, 22542539 - 22542423
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||| |||||||| ||| || |||||||||| ||| ||     
T  22542539 aacactctttttaatactcactctcttattagtttaaatcattgtgggactattctttgaaaattgaacccacacaaagtggtggaacatactttgattt 22542440  T
Q  388 catccaataaaagagta 404  Q
    ||| |||||||||||||    
T  22542439 cattcaataaaagagta 22542423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 279 - 448
Target Start/End: Original strand, 33653502 - 33653671
Alignment:
Q  279 aatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacata 378  Q
    ||||||| ||||||||||| ||||||||||| ||||||| |||||||||||||||| |  ||| |||||||||| || || || |||||| ||| |||||    
T  33653502 aatgctaccaacactctctctaatactcactttcttattggtttaaatcattgtggatcaatattttgaaaattgaaaccccacaaaatggtgggacata 33653601  T
Q  379 cattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||| || |||| |||||| |||| | |  |||||||| |||| |||| |||||||| |||||||||||    
T  33653602 cattgatttcatcaaataaatgagtgattaatagagagagtgttgaaaactgagtgttgctagcattcct 33653671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 281 - 448
Target Start/End: Original strand, 20225356 - 20225521
Alignment:
Q  281 tgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacataca 380  Q
    ||||| |||||||||||||   || | |||||||||| ||||||||||||||| || || |||||| ||||  |||||||||||| || ||| |||| ||    
T  20225356 tgctagcaacactctcttttgaacactctctcttattggtttaaatcattgtgagtctacactttggaaatagaacccacaaaaagtggtgggacatgca 20225455  T
Q  381 ttgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    | | ||||||||||||||||||| |||| |||||||  |||| ||||||||||||| |||||||||||    
T  20225456 tggattccatccaataaaagagtgagtgctagagag--tgttcaaaagtgagtgttgctagcattcct 20225521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 288 - 435
Target Start/End: Complemental strand, 722315 - 722168
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||| || ||||| |||||| |||  ||| ||| || ||| |||||| ||| ||     
T  722315 aacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgggacatactttgattt 722216  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgt 435  Q
    |||||||||||| ||| |||| |||||||| |||| |||  |||||||    
T  722215 catccaataaaaaagtgagtgctagagagagtgttgaaagatgagtgt 722168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 288 - 435
Target Start/End: Original strand, 754602 - 754749
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||| || ||||| |||||| |||  ||| ||| || ||| |||||| |||  |     
T  754602 aacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgggacatactttgagtt 754701  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgt 435  Q
    |||||||||||| ||| ||||||||||| | |||| |||||| |||||    
T  754702 catccaataaaaaagtgagtgttagagaaagtgttgaaaagtaagtgt 754749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 288 - 436
Target Start/End: Complemental strand, 49242328 - 49242180
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| | ||||||| ||||||||| |||||||||||||||  | || || ||||||||| |||||||| ||| |||||| ||||| |||| ||     
T  49242328 aacactctctatgatactcattctcttattggtttaaatcattgtgaatctacacattgaaaattgaacccacacaaagtgatgggacatatattgattt 49242229  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    |||||||| ||| ||| | ||||||| ||| |||| |||||||||||||    
T  49242228 catccaattaaaaagtgactgttagatagagtgttcaaaagtgagtgtt 49242180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 313 - 448
Target Start/End: Original strand, 49769851 - 49769986
Alignment:
Q  313 ttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttag 412  Q
    |||||||||||||||||||| ||| |||||||||||||| |||| |||| |||||  ||| | |||  ||| || ||||||||||||||||| ||||||     
T  49769851 ttattagtttaaatcattgtaggtttatactttgaaaataaaactcacataaaatagtgggatatattttgatttcatccaataaaagagtatgtgttaa 49769950  T
Q  413 agagaatgttaaaaagtgagtgttactagcattcct 448  Q
    | |||||||| |||||| | |||| |||||||||||    
T  49769951 aaagaatgttcaaaagtaactgttgctagcattcct 49769986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 287 - 409
Target Start/End: Original strand, 24938436 - 24938558
Alignment:
Q  287 caacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgctt 386  Q
    ||||||| ||| ||||||| ||||||||||| |||||||||||||| ||| || ||||| |||||| || ||| | |||||| ||| |||||||||| ||    
T  24938436 caacactttctctaatacttactctcttattggtttaaatcattgtaggtctacactttaaaaattgaatccaaacaaaatggtgggacatacattgatt 24938535  T
Q  387 ccatccaataaaagagtaagtgt 409  Q
     |||||||||||||||| |||||    
T  24938536 acatccaataaaagagtgagtgt 24938558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 288 - 448
Target Start/End: Original strand, 26361330 - 26361482
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||| |||| |||||||||||| |||||| |||||||||||| ||||| || |||||||| ||| |||||||| |||||| |||  |||||||||  |     
T  26361330 aacaccctctctaatactcactcacttattggtttaaatcattatgggtctacactttgaatattgaacccacacaaaatggtgggtcatacattgactt 26361429  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||||||||    ||||||||||    |||| ||||||||||||| |||||||||||    
T  26361430 catccaataaaag----agtgttagag----tgttgaaaagtgagtgttgctagcattcct 26361482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 325 - 448
Target Start/End: Complemental strand, 50571985 - 50571862
Alignment:
Q  325 atcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaa 424  Q
    ||||||| |||| || |||||||||||| || ||||| ||| ||||||  ||||||||| || |||| |||||||||||||||| |||||||| |||| |    
T  50571985 atcattgcgggtctacactttgaaaattgaagccacataaattgatggggcatacattgatttcatctaataaaagagtaagtgctagagagagtgttga 50571886  T
Q  425 aaagtgagtgttactagcattcct 448  Q
    ||||||| |||| ||| |||||||    
T  50571885 aaagtgactgttgctaacattcct 50571862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 310 - 448
Target Start/End: Complemental strand, 49077385 - 49077247
Alignment:
Q  310 ctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgt 409  Q
    |||||||| |||||||||||||||||| || ||||| |||||| |||||||| ||| || ||| ||||| |||  ||  ||| ||||||||| | ||||     
T  49077385 ctcttattggtttaaatcattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatatattaattttatctaataaaagaatgagtgc 49077286  T
Q  410 tagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    || |||||||||| |||| |||||||| |||||||||||    
T  49077285 taaagagaatgttgaaaactgagtgttgctagcattcct 49077247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 441
Target Start/End: Complemental strand, 20454696 - 20454545
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||| ||||||||| |||||  ||||||||||||||| | || |||||||||||| |||| ||| ||| || ||| |||||||||| ||     
T  20454696 aacactctctctaacactcactctgttattgatttaaatcattgtggatctacactttgaaaattgaaccaacacaaagtg-tgg-acatacattgattt 20454599  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactag 441  Q
     ||| ||||||||||| |||| |||||||| |||| |||||| |||||| ||||    
T  20454598 tatctaataaaagagtgagtgctagagagagtgttgaaaagtaagtgttgctag 20454545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 288 - 399
Target Start/End: Complemental strand, 52671988 - 52671877
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |  | || ||||| |||||| |||  ||| |||||| ||| |||||||||  ||     
T  52671988 aacactctctttaatactcactatcttattagtttaaatcattgagaatttacactttaaaaattgaacttacataaaatggtgggacatacatttattt 52671889  T
Q  388 catccaataaaa 399  Q
    ||||||||||||    
T  52671888 catccaataaaa 52671877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 299 - 453
Target Start/End: Original strand, 45081775 - 45081929
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||||||||||| ||||| |||||||| |||||| ||||| |||||| ||||   ||||||| |||||| | |||||| |||   ||||||| ||||||    
T  45081775 taatactcactcttttattggtttaaattattgtgagtgtacactttggaaataggacccacacaaaatggtagaacatgcatgtattccatcaaataaa 45081874  T
Q  399 agagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcctttttc 453  Q
    ||| |||||| || | |||||||| ||||| || |||| ||| ||||||| ||||    
T  45081875 agaataagtgctaaaaagaatgttcaaaagagaatgttgctaacattcctctttc 45081929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 299 - 448
Target Start/End: Original strand, 34129433 - 34129582
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||||||||||| ||||| ||||||| ||||||| ||  | |||||||||||| ||| |||| ||| || ||| | |||||||| |  ||||||||| |    
T  34129433 taatactcactcttttattggtttaaaccattgtgagtccacactttgaaaattgaacacacacaaagtggtgggatatacattgatctcatccaataga 34129532  T
Q  399 agagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||| |||| |||||||| | || |||||||| |||| ||| |||||||    
T  34129533 agagtgagtgctagagagagttttgaaaagtgaatgttgctaccattcct 34129582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 322 - 436
Target Start/End: Original strand, 46242000 - 46242112
Alignment:
Q  322 taaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgt 421  Q
    ||||||||||||||| |||| |||||||||| |||| ||| |||||| ||| ||||||| || || ||||| ||||||| || |||  |||||||  |||    
T  46242000 taaatcattgtgggtctatattttgaaaattgaacctacacaaaatggtgggacatacaatgatttcatcccataaaagtgtgagttctagagag--tgt 46242097  T
Q  422 taaaaagtgagtgtt 436  Q
    |||||||||||||||    
T  46242098 taaaaagtgagtgtt 46242112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 306 - 441
Target Start/End: Original strand, 48339380 - 48339515
Alignment:
Q  306 cactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaa 405  Q
    |||||| ||||| ||||||| |||| ||||| ||  ||||||||||| |||||||| ||| || |||||||||||||| ||   |||||||| ||||| |    
T  48339380 cactcttttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtga 48339479  T
Q  406 gtgttagagagaatgttaaaaagtgagtgttactag 441  Q
    |||||| ||||| || | || |||||||||| ||||    
T  48339480 gtgttaaagagagtgctcaatagtgagtgttgctag 48339515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 299 - 428
Target Start/End: Original strand, 25719145 - 25719275
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggt-gtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataa 397  Q
    ||||||||||||||| ||| | ||||||||||||||||  || | |||| |||| ||||||||| ||| || ||| |||||||||| || || |||||||    
T  25719145 taatactcactctctgattgggttaaatcattgtgggtcctacattttggaaatgaaacccacataaagtggtgggacatacattgatttcaaccaataa 25719244  T
Q  398 aagagtaagtgttagagagaatgttaaaaag 428  Q
     ||||| |||||| |||||| ||| ||||||    
T  25719245 gagagtgagtgtttgagagagtgtaaaaaag 25719275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 288 - 438
Target Start/End: Original strand, 19937194 - 19937343
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||||||||||||| |||||||| || || |||| ||||||||| | | ||||||||||||||  ||| |||| | |||| ||| |||||||||| ||     
T  19937194 aacactctctttaattctcactcttttgttggtttgaatcattgtcgatctatactttgaaaatagaactcacatataatggtgggacatacattgattg 19937293  T
Q  388 catccaa-taaaagagtaagtgttagagagaatgttaaaaagtgagtgttac 438  Q
     |||||| ||||| | ||| || |||||||||  || |||||||||||||||    
T  19937294 tatccaattaaaaaattaaatgctagagagaa--tttaaaagtgagtgttac 19937343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 341 - 445
Target Start/End: Complemental strand, 39016768 - 39016664
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    |||||| ||||  |||||||  |||||| ||| |||||||||| || |||||||||||| ||||||||||| ||||| |||| ||||| || |||| |||    
T  39016768 actttggaaatggaacccacgtaaaatggtgggacatacattgatttcatccaataaaatagtaagtgttatagagagtgtttaaaagagaatgttgcta 39016669  T
Q  441 gcatt 445  Q
    |||||    
T  39016668 gcatt 39016664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 288 - 448
Target Start/End: Original strand, 40991611 - 40991771
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| | ||||||||||| ||||| |||||||||||||||||| || ||||   ||||    || | | ||   | ||| ||||| |||| ||     
T  40991611 aacactctctctgatactcactcttttattggtttaaatcattgtgggtctacacttcagaaatagtgccaatacaatggggtgggacatatattgattt 40991710  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||| ||||||| |||| |||||||| |||| ||||||||||||| |||||||||||    
T  40991711 catccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttgctagcattcct 40991771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 43958240 - 43958152
Alignment:
Q  357 ccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    ||||| |||||| ||| |||||||||| ||| || |||||||||||| | || |||||||||||||||||| |||||||| ||| ||||    
T  43958240 ccacataaaatggtgggacatacattgattctattcaataaaagagtgaatgctagagagaatgttaaaaactgagtgttgctaacatt 43958152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 445
Target Start/End: Original strand, 10169676 - 10169822
Alignment:
Q  297 tttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaata 396  Q
    ||||||| ||||||||||||| |||||||| ||||||| | |||  |||||||||| ||| |||| ||| || | | ||||| |||| || |||||||||    
T  10169676 tttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtaggacatatattgatttcatccaata 10169775  T
Q  397 aaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    | ||||| | | ||||||||  |||| |||||||| ||||  |||||||    
T  10169776 atagagtgaatattagagag--tgttgaaaagtgaatgttgttagcatt 10169822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 288 - 433
Target Start/End: Complemental strand, 47009347 - 47009202
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||| |||| ||||||||||| ||||||| |||||||||||||||  | || |||||||||||| ||| |||| |||  | ||  ||| |||||  ||     
T  47009347 aacaccctctctaatactcactttcttattggtttaaatcattgtgtatctacactttgaaaattgaactcacacaaagcggtgagacaaacattaattt 47009248  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagt 433  Q
     ||||||||||||||| |||| |||| ||| |||| |||| |||||    
T  47009247 tatccaataaaagagtgagtgctagaaagagtgttgaaaaatgagt 47009202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 436
Target Start/End: Original strand, 33995957 - 33996105
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||| ||||||||| | | |||  || ||||||| ||||||| || || | |||||||||| |||||||||||| || ||  |||||||||| ||     
T  33995957 aacactctttttaatacttattatctggttggtttaaaccattgtgagtttaaattttgaaaattgaacccacaaaaagtggtgagacatacattgattt 33996056  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
     ||  ||||||||||| | ||||||||||  |||| ||||| |||||||    
T  33996057 gatttaataaaagagtgaatgttagagagtgtgttgaaaagagagtgtt 33996105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 10100247 - 10100200
Alignment:
Q  33 caatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    |||||||||||||| | |||||||||||||||||||| ||||||||||    
T  10100247 caatggttaagaaagccaaaagtaacatgtttgcattggtttcaacaa 10100200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 341 - 448
Target Start/End: Complemental strand, 13070045 - 13069939
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    |||||||||||  |||||||| ||| || |||||||||||||| || || ||||||||||||| |||| |||||||  || | ||||| |||| || |||    
T  13070045 actttgaaaatggaacccacataaagtggtggaacatacattgatttca-ccaataaaagagtgagtgctagagagtgtgctcaaaagagagtattccta 13069947  T
Q  441 gcattcct 448  Q
    ||||||||    
T  13069946 gcattcct 13069939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 341 - 448
Target Start/End: Original strand, 42862496 - 42862603
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    |||||||||||  |||||||| ||| || ||| |||||||||| || || ||||||||| ||| |||| |||||| | || | ||||| |||||||| ||    
T  42862496 actttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaaaagtgagtgctagagaaagtgctcaaaagagagtgttatta 42862595  T
Q  441 gcattcct 448  Q
    ||||||||    
T  42862596 gcattcct 42862603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 288 - 403
Target Start/End: Original strand, 43124536 - 43124651
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||| | |||||| |||||||||||| ||||||||| |  ||||| || | ||||||||| || || ||| |||||| ||| |||||||||| ||     
T  43124536 aacactctttataatacgcactctcttattggtttaaatcttcatgggtatacagtttgaaaataaagcctacacaaaatggtgggacatacattgattt 43124635  T
Q  388 catccaataaaagagt 403  Q
    |||||| |||| ||||    
T  43124636 catccattaaatgagt 43124651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 446
Target Start/End: Complemental strand, 46287499 - 46287441
Alignment:
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    |||||||||||| |||||||| |||| | ||| || |||||||||||||||||||||||    
T  46287499 catccaataaaatagtaagtgctagaaaaaatattgaaaagtgagtgttactagcattc 46287441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 288 - 416
Target Start/End: Complemental strand, 19447290 - 19447161
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggt-gtatactttgaaaattaaacccacaaaaaatgatggaacatacattgctt 386  Q
    |||||||||||||||||||||||||| |||   |||||||||||| |||  |  | |||||||||  |||||||| ||| || ||| |||||||||| ||    
T  19447290 aacactctctttaatactcactctctaattgagttaaatcattgtcggtcctgcattttgaaaatggaacccacataaagtggtgggacatacattggtt 19447191  T
Q  387 ccatccaataaaagagtaagtgttagagag 416  Q
     || ||||||| |||||  ||||| |||||    
T  19447190 tcacccaataagagagtgggtgtttgagag 19447161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 289 - 438
Target Start/End: Complemental strand, 29699645 - 29699497
Alignment:
Q  289 acactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttcc 388  Q
    ||||||| | ||||| |||||||||||||  ||||||||||||| ||  ||||||||| ||||  |||| ||| ||| || ||| ||||  |||| || |    
T  29699645 acactctatctaatattcactctcttattgttttaaatcattgtcgggctatactttg-aaatagaaccaacacaaagtggtgggacatgtattgatttc 29699547  T
Q  389 atccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttac 438  Q
    ||||||||||||||| |||| |||| ||  | || ||||||| |||||||    
T  29699546 atccaataaaagagtgagtgctagaaagggtattcaaaagtgggtgttac 29699497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 448
Target Start/End: Original strand, 13070069 - 13070125
Alignment:
Q  392 caataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||||||| ||||||||||| |||||| ||||| ||||||| |||||| ||||    
T  13070069 caataaaagagtgagtgttagagaaaatgttcaaaagagagtgttgctagcactcct 13070125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 449
Target Start/End: Original strand, 47237816 - 47237924
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    ||||||||||| ||||  | | ||| || ||| ||||| |||| || |||||||||||||||| | || |||||||| |||| ||||| |||||||  ||    
T  47237816 actttgaaaatgaaacttatataaagtggtgggacatatattgatttcatccaataaaagagtgaatgctagagagagtgttcaaaagagagtgttgata 47237915  T
Q  441 gcattcctt 449  Q
    |||||||||    
T  47237916 gcattcctt 47237924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 380
Target Start/End: Original strand, 52279281 - 52279373
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacataca 380  Q
    |||||||| | ||||| |||||||| ||||  | ||||||||||||||| || |||||||||||| || ||| ||||| |  |||||||||||    
T  52279281 aacactctatctaatattcactctcctattgatctaaatcattgtgggtctaaactttgaaaattgaatccagaaaaagttgtggaacataca 52279373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 349
Target Start/End: Complemental strand, 11895181 - 11895134
Alignment:
Q  302 tactcactctcttattagtttaaatcattgtgggtgtatactttgaaa 349  Q
    |||||||||||||||| ||| |||||||||||||| || |||||||||    
T  11895181 tactcactctcttattcgttcaaatcattgtgggtctacactttgaaa 11895134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 398
Target Start/End: Original strand, 31250924 - 31251015
Alignment:
Q  307 actctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||| |||||  ||||||||||||||||| || | |||||||||| |||   || |||||| ||| |||||||||| || |||||||||||    
T  31250924 actcttttattgatttaaatcattgtgggtctacattttgaaaattgaacgtccataaaatggtgggacatacattgatttcatccaataaa 31251015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 333
Target Start/End: Complemental strand, 34961801 - 34961762
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtg 333  Q
    |||||||||||||||||| |||||||||||||| ||||||    
T  34961801 ctctttaatactcactcttttattagtttaaattattgtg 34961762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 40436056 - 40436103
Alignment:
Q  33 caatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    |||||||||||||||| ||||||| ||||||||| || ||||||||||    
T  40436056 caatggttaagaaaaccaaaagtagcatgtttgctttggtttcaacaa 40436103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 45688714 - 45688765
Alignment:
Q  29 agggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    |||||||| |||||| || | ||||||| |||||||||||||||||||||||    
T  45688714 agggcaatagttaaggaagccaaaagtagcatgtttgcattagtttcaacaa 45688765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 47188803 - 47188752
Alignment:
Q  29 agggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    ||||||||||||||| || | ||||||| |||||||||||| ||||||||||    
T  47188803 agggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaa 47188752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 408
Target Start/End: Original strand, 50481584 - 50481687
Alignment:
Q  305 tcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagta 404  Q
    ||||||||||||| |||||||| |||||| || || |||||||||||  || ||| | ||| || ||  |||||| ||| || ||||||||||||||||     
T  50481584 tcactctcttattggtttaaatgattgtgtgtctacactttgaaaatagaaaccatacaaagtggtgagacatactttgatttcatccaataaaagagtg 50481683  T
Q  405 agtg 408  Q
    ||||    
T  50481684 agtg 50481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 50514747 - 50514700
Alignment:
Q  33 caatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    ||||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  50514747 caatggttaaggaaaccaaaagtagcatgtttgcattggtttcaacaa 50514700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 15986237 - 15986277
Alignment:
Q  29 agggcaatggttaagaaaactaaaagtaacatgtttgcatt 69  Q
    ||||||||||||||| ||||||||||||  |||||||||||    
T  15986237 agggcaatggttaaggaaactaaaagtagaatgtttgcatt 15986277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 19933498 - 19933542
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgt 332  Q
    |||||||||||||||||  ||||  ||||||||||||||||||||    
T  19933498 aacactctctttaataccaactcatttattagtttaaatcattgt 19933542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 432
Target Start/End: Complemental strand, 22592362 - 22592318
Alignment:
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgag 432  Q
    |||||||||||||||| ||||  |||||||||||| |||||||||    
T  22592362 catccaataaaagagtgagtgccagagagaatgttcaaaagtgag 22592318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 448
Target Start/End: Original strand, 33787992 - 33788052
Alignment:
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||||||||| || |||||||||| | ||||| ||||| ||||||| |||||| ||||    
T  33787992 catccaataaaagtgtgagtgttagagtggatgttgaaaagagagtgttgctagcactcct 33788052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 37451046 - 37451098
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaat 351  Q
    ||||||||||||| ||||| ||||||||||||| | || || |||||||||||    
T  37451046 taatactcactcttttattggtttaaatcattgcgagtctacactttgaaaat 37451098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 39016793 - 39016845
Alignment:
Q  393 aataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    |||||||||||||||| |||||||| |||| ||||| ||||||| ||| ||||    
T  39016793 aataaaagagtaagtgctagagagagtgttcaaaagagagtgttgctaacatt 39016845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 40925843 - 40925787
Alignment:
Q  389 atccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    |||||||||||||||| |||||||||||| | |||||||| | ||| | ||||||||    
T  40925843 atccaataaaagagtaggtgttagagagagtattaaaaagagcgtgctcctagcatt 40925787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 2e-38; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 288 - 448
Target Start/End: Complemental strand, 28529409 - 28529251
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||||| || |||||||||||| |||||||  | | || ||| |||||||||| ||     
T  28529409 aacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccac--acagtggtgggacatacattgattt 28529312  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||||||||||| |||| |||||||| |||| ||||||||||||| |||||||||||    
T  28529311 catccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattcct 28529251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 288 - 448
Target Start/End: Original strand, 20493467 - 20493627
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| || |||||||||||||||| |||||||||||||||||| || |||||||| ||| ||||| || ||| || | | |||||||||| ||     
T  20493467 aacactctctctattactcactctcttattggtttaaatcattgtgggtctacactttgaatattgaacccccacaaagtggtaggacatacattgattt 20493566  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||||||| |||| ||||||||||||| |||| ||||||||||||| |||||||||||    
T  20493567 catccaataaatgagtgagtgttagagagagtgttgaaaagtgagtgttgctagcattcct 20493627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 288 - 448
Target Start/End: Complemental strand, 46450224 - 46450065
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccaca-aaaaatgatggaacatacattgctt 386  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||| || |||||| ||||  |||||||| |||| || ||| |||||||||| ||    
T  46450224 aacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgcaaatagaacccacacaaaagtggtgggacatacattgatt 46450125  T
Q  387 ccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||| ||||||||||| |||| |||||||  |||| ||||||||||||| |||||||||||    
T  46450124 ccatctaataaaagagtgagtgctagagag--tgttcaaaagtgagtgttgctagcattcct 46450065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 288 - 448
Target Start/End: Original strand, 41451917 - 41452077
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||| ||  ||||||||||| |||||||| ||| || ||| |||||| ||| ||     
T  41451917 aacactctctctaatactcactctcttattggtttaaatcattgtgggtctactctttgaaaattgaacccacacaaagtggtgggacatactttgattt 41452016  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||||||||||| |||  ||||||   |||| ||||||||||||| |||| ||||||    
T  41452017 catccaataaaagagtgagtactagagattgtgttgaaaagtgagtgttgctagtattcct 41452077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 288 - 448
Target Start/End: Original strand, 52123978 - 52124138
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||| || |||||||||||| ||||| || |||||  ||| |||||||||  ||     
T  52123978 aacactctctctaatactcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacccccacaaaatagtgggacatacattaattt 52124077  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||| |||  ||| |||| ||||||||  ||||||||||||||||| |||||||||||    
T  52124078 catccaacaaataagtgagtgctagagagagcgttaaaaagtgagtgttgctagcattcct 52124138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 288 - 453
Target Start/End: Complemental strand, 24734863 - 24734698
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||  ||  ||||||||||| |||||||| ||| || ||| |||||| ||| ||     
T  24734863 aacactctctctaatactcactctcttattggtttaaatcattgtgggcctactctttgaaaattgaacccacacaaagtggtgggacatactttgattt 24734764  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcctttttc 453  Q
    |||||||||||||||| |||  ||||||   |||| ||||||||||||| |||| |||||| ||||    
T  24734763 catccaataaaagagtgagtactagagattgtgttgaaaagtgagtgttgctagtattcctctttc 24734698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 288 - 436
Target Start/End: Original strand, 8825001 - 8825149
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||||||||||||||||||||||| |||||||| |||||| ||||| |||||||||||| ||||| || |||||| ||| ||||| |||| ||     
T  8825001 aacactctctttaatactcactctcttattggtttaaattattgtgagtgtagactttgaaaattgaacccgcataaaatggtgggacatatattgattt 8825100  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    |||| |||||||| || |||  ||||||||  ||| |||||||||||||    
T  8825101 catctaataaaagggtgagtactagagagatggttgaaaagtgagtgtt 8825149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 288 - 448
Target Start/End: Original strand, 37776725 - 37776885
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||| |||| ||||||||||||||||| | |||||||||||||| ||| || |||||||||||| |||||||| ||| || | | |||||||||| ||     
T  37776725 aacaccctctctaatactcactctcttagtggtttaaatcattgtaggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 37776824  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||| ||||||||||| |||| | |||| | |||| ||||||||||||| |||||||||||    
T  37776825 catctaataaaagagtgagtgctggagaaagtgttgaaaagtgagtgttgctagcattcct 37776885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 288 - 410
Target Start/End: Original strand, 18427172 - 18427294
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||||| || |||||||||||  |||||||| |||||| ||| |||||||||| ||     
T  18427172 aacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaatagaacccacacaaaatggtgggacatacattgattt 18427271  T
Q  388 catccaataaaagagtaagtgtt 410  Q
    ||||||||||| |||| ||||||    
T  18427272 catccaataaatgagtgagtgtt 18427294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 319 - 431
Target Start/End: Original strand, 26310499 - 26310611
Alignment:
Q  319 gtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaa 418  Q
    |||||||||||| ||||| || |||||||||||| |||| |||||||||| ||| |||||||||| || ||||||||||||||||||||| ||||||||     
T  26310499 gtttaaatcattatgggtctacactttgaaaattgaaccaacaaaaaatggtgggacatacattgatttcatccaataaaagagtaagtgctagagagag 26310598  T
Q  419 tgttaaaaagtga 431  Q
    |||| ||||||||    
T  26310599 tgttgaaaagtga 26310611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 276 - 448
Target Start/End: Original strand, 55452025 - 55452195
Alignment:
Q  276 aggaatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaac 375  Q
    |||||||||| ||||||||||| ||||||||||||| | ||| |||||||||||| || || || |||||| ||||  |||||||| ||| || ||| ||    
T  55452025 aggaatgctagcaacactctctctaatactcactctttcattggtttaaatcattatgagtctacactttggaaatagaacccacacaaagtggtgggac 55452124  T
Q  376 atacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||   ||||||||||||||||||| |||   ||||||  |||| ||||||||||||| ||| |||||||    
T  55452125 atacatgtattccatccaataaaagagtgagtaccagagag--tgttcaaaagtgagtgttgctaacattcct 55452195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 288 - 448
Target Start/End: Complemental strand, 29755658 - 29755498
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||||| || ||||||  || |||||||| |||||||||||||| | | || |||||||||||| |||||||| ||| |  || |||||| |||| |||    
T  29755658 aacactccctctaatacctaccctcttattggtttaaatcattgttgatctacactttgaaaattgaacccacacaaagtagtgaaacatatattgattc 29755559  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
     || | ||||||||||  |||||| |||||||||| ||||||||||||| |||||||||||    
T  29755558 tattcgataaaagagtgggtgttaaagagaatgttgaaaagtgagtgttgctagcattcct 29755498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 288 - 440
Target Start/End: Original strand, 41707462 - 41707613
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||||||| ||| | | ||||||  |||||||| ||||||||| |||||||| |||||| |||||||| ||| ||||| ||||||||||| ||     
T  41707462 aacactctctttaacacttattttcttatg-gtttaaattattgtgggtctatactttaaaaattgaacccacacaaagtgatgaaacatacattgattt 41707560  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
     ||||||| | ||||| ||||||||||||| || | |||||||| ||||||||    
T  41707561 tatccaatgagagagtgagtgttagagagagtgctcaaaagtgaatgttacta 41707613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 289 - 448
Target Start/End: Complemental strand, 46161104 - 46160947
Alignment:
Q  289 acactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttcc 388  Q
    ||||||||| ||||||||||||||||||| |||||||||||| ||| | || |||||| ||||  |||| ||| ||| || | | ||||  |||| || |    
T  46161104 acactctctctaatactcactctcttattggtttaaatcattatggatctacactttggaaatagaaccaacacaaagtggtcggacatgtattgatttc 46161005  T
Q  389 atccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||||||||||| |||| |||||||  |||| ||||||||||||| |||||||||||    
T  46161004 atccaataaaagagtgagtgctagagag--tgttcaaaagtgagtgttgctagcattcct 46160947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 287 - 448
Target Start/End: Complemental strand, 46576108 - 46575946
Alignment:
Q  287 caacactctctttaatactcactctcttattagtttaaatcattgtgggt-gtatactttgaaaattaaacccacaaaaaatgatggaacatacattgct 385  Q
    ||||||||||||||||||||||||||| ||  | |||||||| ||||||  ||| | |||||||||  |||||||||||| || ||| |||||||||| |    
T  46576108 caacactctctttaatactcactctctaatagggttaaatcaatgtggggcgtacattttgaaaatggaacccacaaaaagtggtgggacatacattggt 46576009  T
Q  386 tccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    | || ||||||| ||||| |||||| |||||| |||| || || |||||||  ||||||||||    
T  46576008 ttcagccaataagagagtgagtgtttgagagagtgttgaagagagagtgttgatagcattcct 46575946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 288 - 448
Target Start/End: Original strand, 5452084 - 5452242
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||||||||  ||||||| ||||||||||  |||||||| |||  ||| || |||| ||||||| || ||||| ||| || ||| | |||||||| ||     
T  5452084 aacactctctccaatactcgctctcttattgatttaaatccttg--ggtctacacttagaaaattgaatccacacaaagtggtgggaaatacattgattt 5452181  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||||||||||| | ||||| ||||| |||| ||||||||||||| |||||||||||    
T  5452182 catccaataaaagagtgaatgttaaagagagtgttgaaaagtgagtgttgctagcattcct 5452242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 288 - 444
Target Start/End: Complemental strand, 27243204 - 27243047
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtg-tatactttgaaaattaaacccacaaaaaatgatggaacatacattgctt 386  Q
    |||||||| | ||||||||||||||| ||| | |||||||| |||||||  || |||||| ||||  |||||||| ||| || ||| |||| ||||| ||    
T  27243204 aacactctttctaatactcactctctcattgggttaaatcaatgtgggtcatacactttggaaatggaacccacataaagtggtgggacatgcattgatt 27243105  T
Q  387 ccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcat 444  Q
      ||||||||||||||| ||||||||||||| |||| ||||| ||||||| |||||||    
T  27243104 ttatccaataaaagagtgagtgttagagagagtgttcaaaagagagtgttgctagcat 27243047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 299 - 439
Target Start/End: Complemental strand, 22604707 - 22604567
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    |||| ||||||||||||| |||||||||||||||| || || | |||||||||| ||| | || |||||| ||| |||||||||  ||  ||||||||||    
T  22604707 taattctcactctcttataagtttaaatcattgtgagtctacattttgaaaattgaactcccacaaaatggtgggacatacattaattttatccaataaa 22604608  T
Q  399 agagtaagtgttagagagaatgttaaaaagtgagtgttact 439  Q
     |||| ||||||| ||||| | ||||||||| |||||||||    
T  22604607 tgagtgagtgttaaagagagtattaaaaagtaagtgttact 22604567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 288 - 402
Target Start/End: Original strand, 29588755 - 29588869
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||| |||||||||||||||  ||||||||||||||||| || |||||||||||| ||| |||| ||| |||  | |||||||||| ||     
T  29588755 aacactctctataacactcactctcttattgatttaaatcattgtgggtctacactttgaaaattgaactcacataaagtgaaaggacatacattgattt 29588854  T
Q  388 catccaataaaagag 402  Q
     ||||||||||||||    
T  29588855 tatccaataaaagag 29588869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 434
Target Start/End: Complemental strand, 38414800 - 38414659
Alignment:
Q  293 tctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcc 392  Q
    ||||||||| ||||||||||||||| |||||||| || |||| | || ||||| ||||||||||||||| |||||| ||| |||||||||| |   |||     
T  38414800 tctctttaacactcactctcttattggtttaaattatcgtggatctacactttaaaaattaaacccacacaaaatggtgggacatacattgatcttatct 38414701  T
Q  393 aataaaagagtaagtgttagagagaatgttaaaaagtgagtg 434  Q
    ||| | ||||| | ||||||||| |||| ||||||| |||||    
T  38414700 aatgagagagtgactgttagagaaaatgctaaaaagagagtg 38414659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 294 - 437
Target Start/End: Original strand, 10948588 - 10948731
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcca 393  Q
    |||||||||||||||||| ||||| |||||||||||||||||| || ||||| |||||| |||  ||| ||| || |||||||||||||  |  | ||||    
T  10948588 ctctttaatactcactcttttattggtttaaatcattgtgggtttacactttaaaaattgaacaaacacaaagtggtggaacatacattaatatcgtcca 10948687  T
Q  394 ataaaagagtaagtgttagagagaatgttaaaaagtgagtgtta 437  Q
    |||||  ||| |||| | |||| | |||| ||||||||||||||    
T  10948688 ataaagaagtgagtgcttgagaaagtgttgaaaagtgagtgtta 10948731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 287 - 445
Target Start/End: Complemental strand, 41387720 - 41387564
Alignment:
Q  287 caacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgctt 386  Q
    |||||||||||  |||||||| ||||||||| | |||||||||||||||| |  ||||||||||||||||||||| |||||  ||  | |||||| | ||    
T  41387720 caacactctctccaatactcaatctcttatttgattaaatcattgtgggtctgcactttgaaaattaaacccacacaaaatagtgtgatatacatcgatt 41387621  T
Q  387 ccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
      |||||||||| |||| |||| |||||||  |||| || | |||||||| ||||||||    
T  41387620 taatccaataaatgagtgagtgctagagag--tgttgaataatgagtgttgctagcatt 41387564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 288 - 446
Target Start/End: Complemental strand, 20791454 - 20791296
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||| || | || |||||| ||||  ||| | || ||| || ||| |||||||||| ||     
T  20791454 aacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggacatacattgattt 20791355  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    |||||||||||| ||| |||| || ||||| |||  ||||||||  ||| |||||||||    
T  20791354 catccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaacgttgctagcattc 20791296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 288 - 436
Target Start/End: Original strand, 50156682 - 50156828
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||| | ||||||||||||||||||| |||||||||||||||||| || ||||| |||||| ||||| |  ||| |  |||||||||||||  ||     
T  50156682 aacactctttgtaatactcactctcttattggtttaaatcattgtgggtctacacttttaaaattgaacccccgcaaagttgtggaacatacattaattt 50156781  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    ||| |||||||  ||||||| | |||| |  |||| |||||||||||||    
T  50156782 cattcaataaataagtaagtatcagagtg--tgttgaaaagtgagtgtt 50156828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 448
Target Start/End: Complemental strand, 48351583 - 48351434
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||||||  |||||||||  ||||||||||| ||| | || |||||||||||| |||||||| ||| |  ||  ||||| |||| ||  ||||||||||    
T  48351583 taatactctttctcttattgatttaaatcattatggatatacactttgaaaattgaacccacacaaagtagtgagacatatattgattttatccaataaa 48351484  T
Q  399 agagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||  || ||| ||||| ||||||||| ||||||||  ||||||||||    
T  48351483 agagtgtgtcttaaagagagtgttaaaaactgagtgttgttagcattcct 48351434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 448
Target Start/End: Original strand, 15790397 - 15790551
Alignment:
Q  293 tctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcc 392  Q
    ||||| ||||||||||||||||||| |||||||||||| | ||  || ||||||||||||   ||  || |||||| ||  |||||||||| ||  ||||    
T  15790397 tctctctaatactcactctcttattggtttaaatcattat-ggcctacactttgaaaattgtcccaccataaaatggtgagacatacattgattttatcc 15790495  T
Q  393 aataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||  ||||||||||||| | | |||| |||||||||| ||  ||||||||||    
T  15790496 aataaataagtaagtgttagaaaaagtgttgaaaagtgagttttgttagcattcct 15790551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 309 - 445
Target Start/End: Complemental strand, 13809219 - 13809083
Alignment:
Q  309 tctcttattagtttaaatcattgtgggtg-tatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagt 407  Q
    ||||||||| | ||||| || |||||||  ||||||||| ||||  |||||||| |||||| ||| |||||||||| ||  ||||||||||||||| |      
T  13809219 tctcttattgggttaaaacaatgtgggtcatatactttggaaatggaacccacataaaatggtgggacatacattgattttatccaataaaagagtga-a 13809121  T
Q  408 gttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    |||||||||| |||  ||||| ||||||| ||||||||    
T  13809120 gttagagagagtgtgtaaaagagagtgttgctagcatt 13809083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 279 - 371
Target Start/End: Original strand, 24429038 - 24429131
Alignment:
Q  279 aatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccaca-aaaaatgatg 371  Q
    ||||||| ||| ||||||| ||||||||||| | ||||| |||||||||||||||| | || ||||| |||||| ||||| || ||||||||||    
T  24429038 aatgctagcaatactctctctaatactcactattttattggtttaaatcattgtggatctacactttaaaaattgaaccctcacaaaaatgatg 24429131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 32415542 - 32415591
Alignment:
Q  31 ggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    ||||||||||||| |||| |||||||||||||||||||| ||||||||||    
T  32415542 ggcaatggttaaggaaaccaaaagtaacatgtttgcattggtttcaacaa 32415591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 2419486 - 2419534
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggt 336  Q
    |||||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  2419486 aacactttctttaatactcactttcttattggtttaaatcattgtgggt 2419534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 445
Target Start/End: Original strand, 40715893 - 40716041
Alignment:
Q  297 tttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaata 396  Q
    ||||||| ||| |||| |||||||||||||||||||  ||  | | ||| |||||| |||||||| ||| |||||   ||||||||  || || |  |||    
T  40715893 tttaatattcaatctcctattagtttaaatcattgtatgtcaacattttaaaaattgaacccacacaaagtgatgagtcatacattaatttcaccatata 40715992  T
Q  397 aaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    ||||||| |||| |||||||| |||| ||||||||||||| ||| ||||    
T  40715993 aaagagtgagtgctagagagagtgttgaaaagtgagtgttgctaacatt 40716041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 436
Target Start/End: Original strand, 50661529 - 50661692
Alignment:
Q  276 aggaatgctaacaacactctcttt--aatactcactctcttattagtttaaatcattgtgggtg-tatactttgaaaattaaacccacaaaaaatgatgg 372  Q
    |||| ||||| |||||||||||||  || ||||  ||| ||||| | |||||||| |||||||  || | |||| ||||  |||||||| ||| || |||    
T  50661529 aggactgctatcaacactctcttttgaacactctttcttttattgggttaaatcaatgtgggtcatacattttggaaatggaacccacataaagtggtgg 50661628  T
Q  373 aacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
     |||| ||||| ||  ||| ||||||||||||||||||||||||| |||| ||||| |||||||    
T  50661629 gacatgcattgattttatctaataaaagagtaagtgttagagagagtgtttaaaagagagtgtt 50661692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 448
Target Start/End: Complemental strand, 10769791 - 10769720
Alignment:
Q  377 tacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||| || |||| |||||||||||||||| |||||||| || | ||||| |||||||| ||||||||||    
T  10769791 tacattgatttcatcaaataaaagagtaagtgctagagagagtgctcaaaagagagtgttattagcattcct 10769720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 297 - 348
Target Start/End: Original strand, 38138613 - 38138664
Alignment:
Q  297 tttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaa 348  Q
    ||||||||| ||||||||||| |||||||||||||||| | |||||||||||    
T  38138613 tttaatacttactctcttattggtttaaatcattgtggatctatactttgaa 38138664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 341 - 435
Target Start/End: Original strand, 40702197 - 40702289
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgt 435  Q
    ||||| |||||| |||||||| ||| ||||||| ||||||||  || ||||  ||||||||||||||| |||||||  |||| ||||||||||||    
T  40702197 actttaaaaattgaacccacataaagtgatggatcatacattaatttcatcatataaaagagtaagtgctagagag--tgttgaaaagtgagtgt 40702289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 345
Target Start/End: Complemental strand, 742103 - 742057
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatacttt 345  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||    
T  742103 taatactcattctcttattagtttaaatcattgtgggtctacacttt 742057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 345
Target Start/End: Complemental strand, 752539 - 752493
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatacttt 345  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||    
T  752539 taatactcattctcttattagtttaaatcattgtgggtctacacttt 752493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 432
Target Start/End: Original strand, 45515525 - 45515661
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcca 393  Q
    |||| ||||| ||||||||||||| ||| |||||||  | ||| || |||||||||||| ||| ||||     |||||| | |||||||| || ||||||    
T  45515525 ctctctaatattcactctcttattggtt-aaatcata-taggtctacactttgaaaattgaactcacactctgtgatgggatatacattgatttcatcca 45515622  T
Q  394 ataaaagagtaagtgttagagagaatgttaaaaagtgag 432  Q
    |||||| ||| |||||| |||||| ||||||||||||||    
T  45515623 ataaaatagtgagtgttggagagagtgttaaaaagtgag 45515661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 279 - 416
Target Start/End: Complemental strand, 138930 - 138793
Alignment:
Q  279 aatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacata 378  Q
    |||| ||| ||||| |||||||||||| ||||| |||||  |||||||||||||  || || | ||| |||||| ||  || | |||||| ||  |||||    
T  138930 aatgttaaaaacaccctctttaatacttactcttttattgatttaaatcattgtaagtttacattttaaaaattgaatacatacaaaatggtgagacata 138831  T
Q  379 cattgcttccatccaataaaagagtaagtgttagagag 416  Q
    ||||| || ||| |||||||||||| |||| |||||||    
T  138830 cattgatttcattcaataaaagagtgagtgctagagag 138793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 300 - 401
Target Start/End: Original strand, 20586885 - 20586986
Alignment:
Q  300 aatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaa 399  Q
    |||||||||||| ||||| |||||||| ||||| | | |||||||| |||| |||||  ||| ||| || |||||||||||| | |||| || |||||||    
T  20586885 aatactcactcttttattggtttaaattattgttgatatatactttaaaaactaaacatacataaagtggtggaacatacatcgattccttcaaataaaa 20586984  T
Q  400 ga 401  Q
    ||    
T  20586985 ga 20586986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 411
Target Start/End: Original strand, 19345033 - 19345145
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||||| | ||| ||||| ||||||||||||||| || || | |||||||||| |||||  | ||| || ||| |||||||||| || |||||||||||    
T  19345033 taatacttattcttttattggtttaaatcattgtgagtctacaatttgaaaattgaaccccaacaaagtggtgggacatacattgatttcatccaataaa 19345132  T
Q  399 agagtaagtgtta 411  Q
      | |||||||||    
T  19345133 taaataagtgtta 19345145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 446
Target Start/End: Complemental strand, 30624734 - 30624633
Alignment:
Q  343 tttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagc 442  Q
    |||||||||| ||| |||| ||| || || ||||||||||  ||  || |||||||||||| ||||||||||||  || | ||||||||||||| |||||    
T  30624734 tttgaaaattgaactcacacaaagtggtgaaacatacattaattttattcaataaaagagtgagtgttagagag--tgctcaaaagtgagtgttgctagc 30624637  T
Q  443 attc 446  Q
    ||||    
T  30624636 attc 30624633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 436
Target Start/End: Complemental strand, 24748976 - 24748917
Alignment:
Q  377 tacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    ||||||| || |||||||||||||||| ||||||||||||| || | ||||| |||||||    
T  24748976 tacattgatttcatccaataaaagagtgagtgttagagagagtgctcaaaagagagtgtt 24748917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 359
Target Start/End: Original strand, 29388616 - 29388687
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaaccca 359  Q
    |||||||||| ||| || ||||||||||||   ||||||||||||| || || |||||||||||| ||||||    
T  29388616 aacactctctctaacacccactctcttattgacttaaatcattgtgagtctacactttgaaaattgaaccca 29388687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 36730291 - 36730240
Alignment:
Q  29 agggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    ||||||||||||||| || | ||||||| |||||||||||| ||||||||||    
T  36730291 agggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaa 36730240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 46317461 - 46317508
Alignment:
Q  33 caatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    ||||||||||| || | |||||||||||||||||||| ||||||||||    
T  46317461 caatggttaaggaagccaaaagtaacatgtttgcattggtttcaacaa 46317508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 51817450 - 51817399
Alignment:
Q  29 agggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    ||||||||||||||| || | ||||||| |||||||| ||||||||||||||    
T  51817450 agggcaatggttaaggaagccaaaagtagcatgtttgtattagtttcaacaa 51817399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 8715634 - 8715588
Alignment:
Q  34 aatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    |||||||||| || ||||||||| |||||||||||| ||||||||||    
T  8715634 aatggttaaggaagctaaaagtagcatgtttgcattggtttcaacaa 8715588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 9067521 - 9067475
Alignment:
Q  34 aatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    |||||||||| || ||||||||| |||||||||||| ||||||||||    
T  9067521 aatggttaaggaagctaaaagtagcatgtttgcattggtttcaacaa 9067475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 354 - 448
Target Start/End: Original strand, 37600218 - 37600312
Alignment:
Q  354 aacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||| ||| || ||| |||||||||| || || |||||||||||||  ||| |||||||| || | ||||| |||||||  ||||||||||    
T  37600218 aacccacataaagtggtgggacatacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgttagcattcct 37600312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 354 - 436
Target Start/End: Original strand, 46237134 - 46237216
Alignment:
Q  354 aacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    |||||||| ||| || ||| |||||||||| || |||||||||||||||| | || |||||||| || | ||||| |||||||    
T  46237134 aacccacataaagtggtgggacatacattgatttcatccaataaaagagtgattgctagagagagtgctcaaaagagagtgtt 46237216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 10854955 - 10854992
Alignment:
Q  147 ccccttattcaatgccccaagagcaatgattaacattc 184  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  10854955 ccccttatccaatgccccaagggcaatgattaacattc 10854992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 446
Target Start/End: Complemental strand, 38928075 - 38928006
Alignment:
Q  377 tacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    ||||||| || || ||||||||||||| ||||||||||| | || | ||||| ||||||| |||||||||    
T  38928075 tacattgatttcacccaataaaagagtgagtgttagagaaagtgatcaaaagagagtgttgctagcattc 38928006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 445
Target Start/End: Original strand, 55283167 - 55283236
Alignment:
Q  376 atacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    |||||||| ||  ||||||||| ||| ||||||||| ||||| |||| |||||||||||||  |||||||    
T  55283167 atacattgattttatccaataatagaataagtgttaaagagagtgtttaaaagtgagtgttgttagcatt 55283236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 436
Target Start/End: Complemental strand, 13639460 - 13639412
Alignment:
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    |||||||||||||||| | ||||||||||| ||||| |||| |||||||    
T  13639460 catccaataaaagagtgactgttagagagagtgttagaaagagagtgtt 13639412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 5e-33; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 288 - 448
Target Start/End: Original strand, 1977195 - 1977355
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||| |||| ||||||||||||| ||||| |||||||||||||||| | || |||||||||||| |||||||| ||| || | | |||||||||| ||     
T  1977195 aacacactctctaatactcactcttttattggtttaaatcattgtggatctacactttgaaaattgaacccacacaaagtggttggacatacattgattt 1977294  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||| | |||||| |||| |||||||| ||||||||||||||| || |||||||||||    
T  1977295 catccaacagaagagtgagtgctagagagagtgttaaaaagtgagtattgctagcattcct 1977355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 276 - 448
Target Start/End: Complemental strand, 8914941 - 8914769
Alignment:
Q  276 aggaatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaac 375  Q
    |||||||||| ||||||||||| |   || |||||||||||| |||||||||||||||||| || |||||||||| | |||||||| ||| || ||| ||    
T  8914941 aggaatgctagcaacactctctctgtcacccactctcttattggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtgggac 8914842  T
Q  376 atacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||| ||  ||||||| ||||||| |||||||||||||  | | ||||||||||||| |||||||||||    
T  8914841 atacattggttttatccaatgaaagagtgagtgttagagagagcgctcaaaagtgagtgttgctagcattcct 8914769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 288 - 448
Target Start/End: Complemental strand, 16983552 - 16983392
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||| || || |||||||||||| ||||| || ||| |||||| ||||| | || ||     
T  16983552 aacactctctctaatactcactctcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacaaagtgatgggacataaaatgattt 16983453  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
     ||||||||||  ||| |||| |||| ||| |||| ||||||||||||| |||||||||||    
T  16983452 tatccaataaatcagtgagtgctagatagagtgttgaaaagtgagtgttgctagcattcct 16983392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 288 - 448
Target Start/End: Original strand, 35151751 - 35151911
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||| ||||||| ||||| |||||||||||| ||| ||||||||| || ||||| |||||| || || || |||||| ||| |||||||||| ||     
T  35151751 aacactctatttaatattcactttcttattagtttgaattattgtgggtctacactttaaaaattgaatccccacaaaatggtgggacatacattgattt 35151850  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||||||||||||| || || | ||| |||||||||||||||||| |||| ||||||    
T  35151851 catccaataaaagagtaaatgctaaaaagagtgttaaaaagtgagtgttgctagtattcct 35151911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 279 - 445
Target Start/End: Complemental strand, 32072264 - 32072098
Alignment:
Q  279 aatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacata 378  Q
    ||||||| ||||||||||| |||| | || |||||||||  ||||||| ||||||||| || ||||| |||||| |||||||| ||| || ||| |||||    
T  32072264 aatgctagcaacactctctctaatgcccattctcttattgatttaaataattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacata 32072165  T
Q  379 cattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    ||||  || |||||||||||||||| |||| |||||||| |||| |||||||| |||| ||||||||    
T  32072164 cattcatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgaatgttgctagcatt 32072098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 288 - 445
Target Start/End: Original strand, 9952779 - 9952936
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||||||||| |||||||| | ||||||| |||||||||||||||||| || |||||||||||| ||| |||| ||| || ||| |||| ||||| ||     
T  9952779 aacactctcttaaatactcattatcttattggtttaaatcattgtgggtttacactttgaaaattgaactcacacaaagtggtgggacatgcattgattt 9952878  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    |||||||||||| | | |||| |||||||| |||| |||||| | |||||||||||||    
T  9952879 catccaataaaaaaatgagtgctagagagagtgttgaaaagtaaatgttactagcatt 9952936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 281 - 448
Target Start/End: Complemental strand, 43506698 - 43506536
Alignment:
Q  281 tgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacataca 380  Q
    ||||| |||||||||||  |||||||||||||||||| | |||||||||||||||| || || |||||| |  |||||||| ||| || |||||||||||    
T  43506698 tgctagcaacactctct--aatactcactctcttattggcttaaatcattgtgggtctacacattgaaagtagaacccacacaaagtggtggaacataca 43506601  T
Q  381 ttgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||| ||  ||||||||||| ||| ||||||||||||  |||| ||||||||||||| |||||||||||    
T  43506600 ttgattatatccaataaaa-agtgagtgttagagag--tgttcaaaagtgagtgttgctagcattcct 43506536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 287 - 422
Target Start/End: Original strand, 36804860 - 36804995
Alignment:
Q  287 caacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgctt 386  Q
    ||||| ||||| ||||||| |||||||||||  ||||||| ||||||| |||||| |||||||||| |||||||| |||||| ||| |||||||||| ||    
T  36804860 caacattctctctaatacttactctcttattgatttaaattattgtggatgtatattttgaaaattgaacccacacaaaatggtgggacatacattgatt 36804959  T
Q  387 ccatccaataaaagagtaagtgttagagagaatgtt 422  Q
    ||||||||||| | ||| ||| ||||||||| ||||    
T  36804960 ccatccaataatatagttagtattagagagagtgtt 36804995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 291 - 422
Target Start/End: Original strand, 17499258 - 17499389
Alignment:
Q  291 actctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccat 390  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| | || |||||||||||| |||| ||| |||||| ||| ||||| |||| || |||    
T  17499258 actctctctaatactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaaatggtgggacatatattgatttcat 17499357  T
Q  391 ccaataaaagagtaagtgttagagagaatgtt 422  Q
    |||||||||||   |||| |||||||| ||||    
T  17499358 ccaataaaagatagagtgctagagagagtgtt 17499389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 299 - 446
Target Start/End: Original strand, 28413902 - 28414049
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||||||| ||| ||||| |||||||||||| ||||| ||||||||||||||| ||| |||| ||| || ||| |||||||||| || |||| ||||||    
T  28413902 taatactcattcttttattggtttaaatcattatgggtctatactttgaaaattgaactcacacaaagtggtgggacatacattgatttcatcgaataaa 28414001  T
Q  399 agagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    | ||| || | |||||||| |||| |||||||||||||  ||||||||    
T  28414002 aaagtgagcgctagagagagtgttgaaaagtgagtgttgttagcattc 28414049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 289 - 445
Target Start/End: Complemental strand, 6387719 - 6387564
Alignment:
Q  289 acactctctttaatactcactctcttattagtttaaatcattgtgggt-gtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||||||| ||| ||||| ||||||||| | ||||| || ||||||| |||||||||| ||||  |||||||| |||||| ||| |||||||||| ||     
T  6387719 acactctctctaacactcattctcttattgggttaaaacaatgtgggtcgtatactttggaaatggaacccacataaaatggtgggacatacattgattt 6387620  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
     ||||||||||||||| ||||||||||||  |||  ||||| ||||||| ||||||||    
T  6387619 tatccaataaaagagtgagtgttagagag--tgtccaaaagagagtgttgctagcatt 6387564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 299 - 448
Target Start/End: Original strand, 34861225 - 34861367
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||||||||||||||||| |||||||| ||||||||     |||||||||||| |||| ||| ||| || ||| |||||||||| || |||||||||||    
T  34861225 taatactcactctcttattggtttaaattattgtggg-----actttgaaaattgaacctacacaaagtggtgggacatacattgatttcatccaataaa 34861319  T
Q  399 agagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||| |||| |||||||  |||| ||||||||| | | |||||||||||    
T  34861320 agagtgagtgctagagag--tgttgaaaagtgagaggtgctagcattcct 34861367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 288 - 449
Target Start/End: Complemental strand, 5980037 - 5979877
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||||||||||||||| ||| ||| ||||||| ||  | |||||||||||| |||||||| ||| || ||| |||||||||| |      
T  5980037 aacactctctctaatactcactctcttattggtt-aaaccattgtgagttcacactttgaaaattgaacccacacaaagtggtgggacatacattgatct 5979939  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcctt 449  Q
    ||||||||| ||||||   |  |||||||| |||| |||||| |||||| ||||||||||||    
T  5979938 catccaatagaagagtgtctactagagagagtgttgaaaagtaagtgttgctagcattcctt 5979877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 446
Target Start/End: Complemental strand, 8903996 - 8903852
Alignment:
Q  302 tactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaaga 401  Q
    |||| ||||||||||| |||||||||||||||||| || |||||||||||| |||| ||| ||| || ||| |||||||||| || |||| ||||||  |    
T  8903996 tacttactctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccgacacaaagtggtgggacatacattgatttcatcaaataaacaa 8903897  T
Q  402 gtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    || |||  |||||||| |||| |||| |||||||| ||| |||||    
T  8903896 gtgagtactagagagagtgttgaaaaatgagtgttgctaacattc 8903852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 288 - 399
Target Start/End: Complemental strand, 13214653 - 13214542
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||  |||||||| |||||||||||||||| |  ||||||||| || |||||||||||| || | ||| |||||||||| |||||||||  |||    
T  13214653 aacactctccctaatactcgctctcttattagtttataatattgtgggtctacactttgaaaattgaatctacacaaaatgatgggacatacattaattc 13214554  T
Q  388 catccaataaaa 399  Q
    ||||||||||||    
T  13214553 catccaataaaa 13214542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 438
Target Start/End: Complemental strand, 17915970 - 17915824
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||||||| | ||||||||||||||||||||  |    |||||||||||||||||| ||| |||||| | | |||| | ||  ||     
T  17915970 aacactctctctaatactcactttattattagtttaaatcattgtaag----tactttgaaaattaaaccaacacaaaatggtaggacattcgttatttt 17915875  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttac 438  Q
     ||| ||||||||||||||||||||| |||||||| |||| | ||||||||    
T  17915874 tatctaataaaagagtaagtgttagatagaatgttcaaaattaagtgttac 17915824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 279 - 403
Target Start/End: Complemental strand, 35797560 - 35797438
Alignment:
Q  279 aatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacata 378  Q
    |||||||||||||||||||  ||||||||||||  ||||  ||||||||||||||| | || ||||| |||||| ||| | || ||| || |||||||||    
T  35797560 aatgctaacaacactctctacaatactcactct--tattgatttaaatcattgtggatttacactttaaaaattgaactcgcacaaagtggtggaacata 35797463  T
Q  379 cattgcttccatccaataaaagagt 403  Q
    ||||| ||  |||||||||||||||    
T  35797462 cattgattttatccaataaaagagt 35797438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 436
Target Start/End: Original strand, 24055947 - 24056095
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||| ||| ||| ||||||||||||||| |||||||| ||||||||| || |||||||||||| |||  ||| ||| || ||| |||||||||  ||     
T  24055947 aacactttctctaacactcactctcttattggtttaaataattgtgggtctacactttgaaaattgaacttacacaaagtggtgggacatacattaattt 24056046  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    ||||  |||||||||  |||| || |||||  ||| |||||||||||||    
T  24056047 catctgataaaagagcgagtgctaaagagagcgttgaaaagtgagtgtt 24056095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 380
Target Start/End: Complemental strand, 35819295 - 35819198
Alignment:
Q  281 tgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacataca 380  Q
    |||||||||||||||||||   ||  | ||| |||||||||||||||||||||||| ||||||||||||||| | |||||| |||||| ||| |||||||    
T  35819295 tgctaacaacactctcttttgaac--attcttttattagtttaaatcattgtgggtctatactttgaaaattgagcccacacaaaatggtgggacataca 35819198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 288 - 417
Target Start/End: Original strand, 13407345 - 13407475
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtg-tatactttgaaaattaaacccacaaaaaatgatggaacatacattgctt 386  Q
    |||||||||| ||| ||||| ||||| ||| | |||||||| |||||||  || |||||||||||  |||||||  |||||| ||| |||||||||| ||    
T  13407345 aacactctctctaacactcattctctcattgggttaaatcaatgtgggtcatacactttgaaaatagaacccacttaaaatggtgggacatacattgatt 13407444  T
Q  387 ccatccaataaaagagtaagtgttagagaga 417  Q
      ||||||||||| ||| |||||||||||||    
T  13407445 ttatccaataaaaaagttagtgttagagaga 13407475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 320 - 436
Target Start/End: Complemental strand, 17716977 - 17716863
Alignment:
Q  320 tttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaat 419  Q
    ||||| ||||||||||| || ||||||||||||||||||||| |||||  ||| ||||| |||| || ||||||||||||  || ||||||| ||||  |    
T  17716977 tttaactcattgtgggtctacactttgaaaattaaacccacataaaatagtgggacatatattgatttcatccaataaaactgtgagtgttaaagag--t 17716880  T
Q  420 gttaaaaagtgagtgtt 436  Q
    | | |||||||||||||    
T  17716879 gatgaaaagtgagtgtt 17716863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 351
Target Start/End: Original strand, 7493364 - 7493427
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaat 351  Q
    |||||||| | ||||||||||||||||||| ||||||||||||||| || || |||||||||||    
T  7493364 aacactctttctaatactcactctcttattggtttaaatcattgtgagtctacactttgaaaat 7493427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 9453628 - 9453502
Alignment:
Q  281 tgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggt-gtatactttgaaaattaaacccacaaaaaatgatggaacatac 379  Q
    ||||| ||||||||||||||||||||||||||| ||| | |||||||  |||||||  || | ||||||||   |||||||  ||| |||||| |||| |    
T  9453628 tgctagcaacactctctttaatactcactctctaattgggttaaatctatgtgggtcatacattttgaaaagggaacccacgtaaagtgatgggacatgc 9453529  T
Q  380 attgcttccatccaataaaagagtaag 406  Q
    |||| || |||||||||| ||||||||    
T  9453528 attggtttcatccaataagagagtaag 9453502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 448
Target Start/End: Complemental strand, 31301217 - 31301113
Alignment:
Q  344 ttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagca 443  Q
    ||||||||  ||| |||| ||| || |||||||||||||| || |||||||||||||||| ||||   || | | |||| |||||||||||||| |||||    
T  31301217 ttgaaaatagaactcacacaaagtggtggaacatacattgatttcatccaataaaagagtgagtgccggaaatagtgttcaaaagtgagtgttattagca 31301118  T
Q  444 ttcct 448  Q
    |||||    
T  31301117 ttcct 31301113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 288 - 435
Target Start/End: Original strand, 11962704 - 11962850
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||||||  ||||||||| || | ||||| |||||||||||| ||| | || |||||||||||| |||| ||| |||||| ||| | |||| ||| ||     
T  11962704 aacactcttgttaatactcgcttttttattggtttaaatcatt-tggatctacactttgaaaattgaacctacataaaatggtgggatatactttgattt 11962802  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgt 435  Q
     || |||||||||||| ||| ||| ||||  |||| ||||||||||||    
T  11962803 tattcaataaaagagtgagtattaaagagcgtgttgaaaagtgagtgt 11962850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 448
Target Start/End: Original strand, 13856506 - 13856577
Alignment:
Q  377 tacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||| || ||||||||||||||||  |||||||||||| |||| | |||||  ||||||||||||||||    
T  13856506 tacattgatttcatccaataaaagagtgggtgttagagagagtgttgagaagtggatgttactagcattcct 13856577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 281 - 436
Target Start/End: Complemental strand, 41727595 - 41727440
Alignment:
Q  281 tgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacataca 380  Q
    ||||| ||||||||||| |||||||||||||||| || |||||||||||| || || || || || ||||   |||| ||| |||  | ||| |||||||    
T  41727595 tgctagcaacactctctctaatactcactctcttgttggtttaaatcattatgagtctacacattaaaaacagaacctacacaaagcggtgggacataca 41727496  T
Q  381 ttgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    ||| ||  ||| || |||||||| | || || ||||| |||| |||||||||||||    
T  41727495 ttgattttatctaacaaaagagtgattgctaaagagagtgttcaaaagtgagtgtt 41727440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 3099695 - 3099777
Alignment:
Q  319 gtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaaga 401  Q
    |||||||| |||||| |  ||||||||| ||||  ||| |||| |||||| |||||||||||||| ||||||| |||||||||    
T  3099695 gtttaaattattgtgagactatactttggaaatataactcacacaaaatggtggaacatacattgattccatctaataaaaga 3099777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 448
Target Start/End: Original strand, 7599510 - 7599604
Alignment:
Q  354 aacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||| ||| || ||| | |||||||| || ||||||||||||||||| ||| |||||||| |||| ||||  ||||||| ||| |||||||    
T  7599510 aacccacataaagtgctgggatatacattgatttcatccaataaaagagtaggtgctagagagagtgttcaaaaaagagtgttgctaacattcct 7599604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 6098799 - 6098863
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaatt 352  Q
    |||| ||||| |||||||||||||||||||  ||||||| ||||||| | || ||||||||||||    
T  6098799 aacattctctctaatactcactctcttattgatttaaattattgtggatctacactttgaaaatt 6098863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 423
Target Start/End: Original strand, 17741552 - 17741684
Alignment:
Q  291 actctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccat 390  Q
    ||||||| ||||||||| |   ||||| ||||||| |||| | ||| || |||||||||||| ||| | || |||||| ||| |||||||||| || |||    
T  17741552 actctctctaatactcatttctttattggtttaaaccattataggtctacactttgaaaattgaactctcacaaaatggtgggacatacattgatttcat 17741651  T
Q  391 ccaataaaagagtaagtgttagagagaatgtta 423  Q
    ||||||||  | || ||| |||||||| |||||    
T  17741652 ccaataaacaattacgtgctagagagagtgtta 17741684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 447
Target Start/End: Original strand, 31691637 - 31691692
Alignment:
Q  392 caataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcc 447  Q
    |||||||||||| ||||||| ||||| | || ||||||||||||| ||||||||||    
T  31691637 caataaaagagtgagtgttaaagagagttttcaaaagtgagtgttgctagcattcc 31691692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 448
Target Start/End: Complemental strand, 34952498 - 34952459
Alignment:
Q  409 ttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  34952498 ttagagagagtgttaaaaagtgagtgttgctagcattcct 34952459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 436
Target Start/End: Complemental strand, 35689585 - 35689490
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    |||||||||||  ||| |||| ||| || ||| |||||||||| || |||||||||||| ||| |||| |||||||| || | ||||| |||||||    
T  35689585 actttgaaaatggaactcacataaagtggtgggacatacattgatttcatccaataaaaaagtgagtgctagagagagtgctcaaaagagagtgtt 35689490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 445
Target Start/End: Complemental strand, 5095813 - 5095759
Alignment:
Q  391 ccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    ||||||| ||||| ||| |||||||| ||||| ||||||||||||| ||||||||    
T  5095813 ccaataagagagtgagtattagagaggatgtttaaaagtgagtgttcctagcatt 5095759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 5095788 - 5095826
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgt 332  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  5095788 ctctctaatactcactctcttattggtttaaatcattgt 5095826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 14236497 - 14236451
Alignment:
Q  287 caacactctctttaatactcactctcttattagtttaaatcattgtg 333  Q
    ||||||||||| |||||||||||||||| || |||||||| ||||||    
T  14236497 caacactctctctaatactcactctcttgttggtttaaattattgtg 14236451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 433
Target Start/End: Original strand, 7493469 - 7493514
Alignment:
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagt 433  Q
    |||||||||||| | ||||||||||||||| |||| ||||||||||    
T  7493469 catccaataaaaaaataagtgttagagagagtgtttaaaagtgagt 7493514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 365
Target Start/End: Original strand, 10651846 - 10651923
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaa 365  Q
    ||||||||| || |||| |||||||| ||| |||||||| ||| |||   || |||||||||||||||| ||||||||    
T  10651846 aacactctcatttatacccactctctcatttgtttaaattattatggacatacactttgaaaattaaacacacaaaaa 10651923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 366
Target Start/End: Original strand, 10654113 - 10654203
Alignment:
Q  274 aaaggaatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaa 366  Q
    |||| ||||||||||||||||||||  |||| |||| ||| ||| |||||||| ||| |||   || |||||||||||| ||| |||||||||    
T  10654113 aaagtaatgctaacaacactctctt--atacccactatctcatttgtttaaattattatggacatacactttgaaaatttaacacacaaaaaa 10654203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 416
Target Start/End: Complemental strand, 10868094 - 10868021
Alignment:
Q  343 tttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagag 416  Q
    |||||||||| || ||||| |||||| || |||||||||||  | |||||||||||| | |||||| |||||||    
T  10868094 tttgaaaattgaatccacacaaaatggtgaaacatacattgagttcatccaataaaaaaataagtgatagagag 10868021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 427
Target Start/End: Original strand, 16314379 - 16314436
Alignment:
Q  370 tggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaa 427  Q
    |||||||||||||  ||  ||||||||||||||| ||||| |||||||||||| ||||    
T  16314379 tggaacatacattaattttatccaataaaagagtgagtgtaagagagaatgtttaaaa 16314436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 12212190 - 12212126
Alignment:
Q  378 acattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagc 442  Q
    |||||| || || |||| |||||||| | |||||||||||||||| ||||| ||||||| |||||    
T  12212190 acattgatttcacccaagaaaagagtgaatgttagagagaatgttgaaaagagagtgttgctagc 12212126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 12456618 - 12456554
Alignment:
Q  378 acattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagc 442  Q
    |||||| || || |||| |||||||| | |||||||||||||||| ||||| ||||||| |||||    
T  12456618 acattgatttcacccaagaaaagagtgaatgttagagagaatgttgaaaagagagtgttgctagc 12456554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 12956249 - 12956213
Alignment:
Q  156 caatgccccaagagcaatgattaacattctccttaat 192  Q
    |||||||||||||| |||| |||||||||||||||||    
T  12956249 caatgccccaagagtaatggttaacattctccttaat 12956213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 392 - 436
Target Start/End: Complemental strand, 36804891 - 36804847
Alignment:
Q  392 caataaaagagtaagtgttagagagaatgttaaaaagtgagtgtt 436  Q
    |||||| ||||||||| |||||||||||||| ||||| |||||||    
T  36804891 caataagagagtaagtattagagagaatgttgaaaagagagtgtt 36804847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 44353261 - 44353225
Alignment:
Q  147 ccccttattcaatgccccaagagcaatgattaacatt 183  Q
    |||||||| |||| |||||||||||||||||||||||    
T  44353261 ccccttatccaataccccaagagcaatgattaacatt 44353225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 7e-32; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 279 - 433
Target Start/End: Original strand, 17537115 - 17537269
Alignment:
Q  279 aatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacata 378  Q
    ||||||||||||| ||||| | ||| ||||||||||||| |||||||||||| ||| | || ||||||||||||||||| ||||||| || ||| |||||    
T  17537115 aatgctaacaacaatctctcttatattcactctcttattggtttaaatcattatggatctacactttgaaaattaaaccaacaaaaattggtgggacata 17537214  T
Q  379 cattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagt 433  Q
    ||||| ||  ||| ||||||||||| |||| |||||||| |||| ||||||||||    
T  17537215 cattgatttgatcaaataaaagagtgagtgatagagagagtgttgaaaagtgagt 17537269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 306 - 448
Target Start/End: Complemental strand, 34368500 - 34368358
Alignment:
Q  306 cactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaa 405  Q
    |||||||||||| |||||||||||||||||| || |||||||||| | |||||||| ||| || |||||||||||||| ||  ||||||| ||||||| |    
T  34368500 cactctcttattggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtggaacatacattggttttatccaatgaaagagtga 34368401  T
Q  406 gtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||||| | |||| |||| | |||||| |||||||||||    
T  34368400 gtgttagagaaagtgttcaaaaataagtgttgctagcattcct 34368358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 288 - 448
Target Start/End: Original strand, 28490744 - 28490904
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||||||| || ||||| |||||| |||  ||| ||| || ||| |||||| ||| ||     
T  28490744 aacactctctctaatactcactctcttattggtttaaattattgtgggtctacactttcaaaattgaacttacacaaagtggtgggacatactttgattt 28490843  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||||||||| ||| | || |||||||| | || |||||||| |||| |||||||||||    
T  28490844 catccaataaaaaagtgaatgctagagagagttttgaaaagtgactgttgctagcattcct 28490904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 294 - 448
Target Start/End: Complemental strand, 37455500 - 37455347
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcca 393  Q
    |||| ||||||||||||||||||| |||||| | |||||| || || |||||||||||| ||||| || |||||| |||||||||||||| ||  ||| |    
T  37455500 ctctctaatactcactctcttattggtttaatt-attgtgagtctacactttgaaaattgaacccccacaaaatggtggaacatacattgattttatcga 37455402  T
Q  394 ataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||| ||||  ||| |||||||| ||||||||| |||||||||| || ||||||    
T  37455401 ataaatgagtgtgtgctagagagagtgttaaaaaatgagtgttacaagtattcct 37455347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 279 - 446
Target Start/End: Original strand, 10141989 - 10142154
Alignment:
Q  279 aatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacata 378  Q
    ||||||| ||||||||||| ||| |||||||||||||||  ||||||| ||||| ||| || |||||||||||  |||| ||| ||| || ||| |||||    
T  10141989 aatgctagcaacactctctctaacactcactctcttattgatttaaataattgttggtctacactttgaaaatggaaccaacacaaagtggtgggacata 10142088  T
Q  379 cattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    ||||| ||  ||||||||||||||| |||| || ||||  |||| |||| |||||||| |||||||||    
T  10142089 cattgattttatccaataaaagagtgagtgctatagag--tgttgaaaaatgagtgttgctagcattc 10142154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 288 - 432
Target Start/End: Original strand, 34384713 - 34384857
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||||||||||||||||| ||||  || |||||||||||| || |||| |||||||||| ||| |||| |||||  ||| |||||||||| ||     
T  34384713 aacactctctttaatactcactcttttatcggtctaaatcattgtgagtctataatttgaaaattgaactcacacaaaatagtgggacatacattgattt 34384812  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgag 432  Q
    || ||||||||||| | ||||||| ||| | | ||||||||||||    
T  34384813 cacccaataaaagaatgagtgttaaagaaagtattaaaaagtgag 34384857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 294 - 445
Target Start/End: Original strand, 28223804 - 28223955
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcca 393  Q
    |||| ||||||||||||| ||||| |||||||||||| ||||| ||||||||||||||| | |||||| |||||    ||||||||| |  || ||| ||    
T  28223804 ctctctaatactcactcttttattggtttaaatcattatgggtctatactttgaaaattgagcccacacaaaattggtgaacatacaataatttcattca 28223903  T
Q  394 ataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcatt 445  Q
    |||||||| ||||||||| ||  | |||| ||||||||||||| ||||||||    
T  28223904 ataaaagaataagtgttaaaggtagtgttgaaaagtgagtgttgctagcatt 28223955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 290 - 422
Target Start/End: Original strand, 41105594 - 41105726
Alignment:
Q  290 cactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttcca 389  Q
    |||||||| |||||||| |||||||||| |||||||||| ||||||| |  |||||||||||| |||||||| ||| |  ||| |||| | ||| || ||    
T  41105594 cactctctctaatactcgctctcttattggtttaaatcactgtgggtatgcactttgaaaattgaacccacacaaagtagtgggacatcccttgatttca 41105693  T
Q  390 tccaataaaagagtaagtgttagagagaatgtt 422  Q
    |||||||||||||||||| ||| ||||| ||||    
T  41105694 tccaataaaagagtaagttttatagagagtgtt 41105726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 299 - 403
Target Start/End: Original strand, 5413770 - 5413874
Alignment:
Q  299 taatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||||||||| | ||||| |||||||||||| ||||| || |||||| ||||| |||||||| ||| || ||| |||||||||| || |||||||||||    
T  5413770 taatactcacttttttattggtttaaatcattatgggtctacactttgtaaattgaacccacacaaagtggtgggacatacattgatttcatccaataaa 5413869  T
Q  399 agagt 403  Q
    |||||    
T  5413870 agagt 5413874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 304 - 448
Target Start/End: Complemental strand, 39246750 - 39246606
Alignment:
Q  304 ctcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagt 403  Q
    |||||||||||||| |||||||  ||||||||| || |||||||||| | ||| |||| ||| || ||| |||||||||| ||  ||||||||| | |||    
T  39246750 ctcactctcttattggtttaaagtattgtgggtctacactttgaaaactgaactcacacaaagtggtgggacatacattgattttatccaataagaaagt 39246651  T
Q  404 aagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
     | |||||||||| ||| | |||||||| |||| |||||||||||    
T  39246650 gattgttagagaggatgctcaaaagtgattgttgctagcattcct 39246606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 294 - 408
Target Start/End: Complemental strand, 10950238 - 10950124
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcca 393  Q
    |||| ||||| ||| |||||||||||||||||||||| || || ||||||||||||||  || ||| | |||||| ||| |||||||||| || ||| ||    
T  10950238 ctctctaatattcattctcttattagtttaaatcattatgagtctatactttgaaaatagaatccatacaaaatggtgggacatacattgatttcattca 10950139  T
Q  394 ataaaagagtaagtg 408  Q
    || ||||||||||||    
T  10950138 atgaaagagtaagtg 10950124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 341 - 413
Target Start/End: Original strand, 28155775 - 28155847
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttaga 413  Q
    ||||||||||||||||||| |||||||| | |||||||||||| || ||| ||||||||||||||||| ||||    
T  28155775 actttgaaaattaaacccataaaaaatggttgaacatacattgatttcattcaataaaagagtaagtgctaga 28155847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 341 - 448
Target Start/End: Complemental strand, 4959383 - 4959276
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    |||||||||||  |||||||| |||||||||  |||||||||| || || |||||||||||||  || ||||||||| || | ||||| ||||||| |||    
T  4959383 actttgaaaatgtaacccacataaaatgatgagacatacattgatttcacccaataaaagagtgggtattagagagagtgctcaaaagagagtgttgcta 4959284  T
Q  441 gcattcct 448  Q
    ||||||||    
T  4959283 gcattcct 4959276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 288 - 403
Target Start/End: Original strand, 41330415 - 41330530
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    ||||| ||||||||||||   | ||||||| ||||||||||||||| || || |||||||||||| |||| ||| ||| |||||| |||||||||  ||     
T  41330415 aacacactctttaatactacatttcttattggtttaaatcattgtgagtctacactttgaaaattgaacctacacaaagtgatgggacatacattaattt 41330514  T
Q  388 catccaataaaagagt 403  Q
    |||| |||||||||||    
T  41330515 catctaataaaagagt 41330530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 288 - 446
Target Start/End: Original strand, 30325896 - 30326054
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||| || | || |||||| | ||  ||| | || ||| || ||  |||||||||| ||     
T  30325896 aacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttggagatagaactcgcataaagtggtgagacatacattgattt 30325995  T
Q  388 catccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    |||||||||||| ||| |||| || ||||| |||  |||||||| |||| |||||||||    
T  30325996 catccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 30326054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 416
Target Start/End: Original strand, 28090242 - 28090379
Alignment:
Q  279 aatgctaacaacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacata 378  Q
    ||||||||||||||||| | ||||| ||||||| ||||| |||||||||||||| | | || |||||||||||| ||| |||| ||| || ||| ||||     
T  28090242 aatgctaacaacactctatgtaatattcactcttttattggtttaaatcattgttgatctaaactttgaaaattgaactcacacaaagtggtgggacatg 28090341  T
Q  379 cattgcttccatccaataaaagagtaagtgttagagag 416  Q
     |||| || |||  |||| || |||||||| |||||||    
T  28090342 aattgatttcatataatataatagtaagtgatagagag 28090379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 422
Target Start/End: Original strand, 28434846 - 28434972
Alignment:
Q  294 ctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatcca 393  Q
    |||| ||||||||| | ||||||| |||||||||||||||||| || |||||||||||| |||| ||  | | || ||| ||||| |||| ||  |||||    
T  28434846 ctctctaatactcattttcttattggtttaaatcattgtgggtctaaactttgaaaattgaaccaac--acagtggtgggacatatattgattttatcca 28434943  T
Q  394 ataaaagagtaagtgttagagagaatgtt 422  Q
    |||||||| | ||||||||||||| ||||    
T  28434944 ataaaagaattagtgttagagagagtgtt 28434972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 287 - 351
Target Start/End: Original strand, 25710493 - 25710557
Alignment:
Q  287 caacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaat 351  Q
    ||||||||||||||||| ||| ||||||||| |||||||| ||||||||| || |||||||||||    
T  25710493 caacactctctttaatattcattctcttattggtttaaattattgtgggtctacactttgaaaat 25710557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 290 - 448
Target Start/End: Original strand, 28611802 - 28611960
Alignment:
Q  290 cactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttcca 389  Q
    |||||||| ||| ||  ||||| |||||  |||||||||||||| || || ||||| |||||  ||| || | ||| |||||| ||||||| || ||  |    
T  28611802 cactctctctaacaccaactcttttattgatttaaatcattgtgcgtctacactttaaaaatggaactcatacaaagtgatgggacatacactggttata 28611901  T
Q  390 tccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||| ||||||| | ||||||||||| || | |||||||||||||  ||||||||||    
T  28611902 tccaatgaaagagtgaatgttagagagagtgctcaaaagtgagtgttgttagcattcct 28611960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 287 - 448
Target Start/End: Complemental strand, 43405552 - 43405391
Alignment:
Q  287 caacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgctt 386  Q
    |||||||| || | ||| |||||||||||||  ||||||||||||||||| || |||||| ||||  |||  | | ||| || ||  |||||||||| ||    
T  43405552 caacactccctctgatattcactctcttattgatttaaatcattgtgggtctacactttggaaatagaacatatacaaagtggtgagacatacattgatt 43405453  T
Q  387 ccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
     ||| |||||||||||| ||||  | ||||  ||||||||| ||||| ||| ||||||||||    
T  43405452 tcattcaataaaagagtgagtgacaaagagcgtgttaaaaattgagtattattagcattcct 43405391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 446
Target Start/End: Original strand, 32050414 - 32050490
Alignment:
Q  370 tggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    |||||||||||||| || || ||||||||| ||| |||| ||||||||||| | ||||| ||||||| |||||||||    
T  32050414 tggaacatacattgatttcacccaataaaaaagtgagtgctagagagaatgctcaaaagagagtgttgctagcattc 32050490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 38607164 - 38607212
Alignment:
Q  279 aatgctaacaacactctctttaatactcactctcttattagtttaaatc 327  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||||||||    
T  38607164 aatgctagcaacactctctttaatacttactctcttatttgtttaaatc 38607212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 305 - 408
Target Start/End: Original strand, 4877792 - 4877895
Alignment:
Q  305 tcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagta 404  Q
    |||||||||||||  |||||||||  ||| || ||||| |||||||||||| ||||  |||||||||  || ||||||| || |||||||||||| | ||    
T  4877792 tcactctcttattgatttaaatcaacgtgagtttatacgttgaaaattaaaaccacgtaaaatgatgagacgtacattgatttcatccaataaaaaaata 4877891  T
Q  405 agtg 408  Q
    ||||    
T  4877892 agtg 4877895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 341 - 448
Target Start/End: Original strand, 42224666 - 42224773
Alignment:
Q  341 actttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttacta 440  Q
    |||||| ||||  |||||||| ||| || ||| |||||||||| || || | ||||||||||| |||| |||||||| || | ||||| ||||||| |||    
T  42224666 actttggaaatggaacccacataaagtggtgggacatacattgatttcacctaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgcta 42224765  T
Q  441 gcattcct 448  Q
    ||||||||    
T  42224766 gcattcct 42224773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 25568428 - 25568382
Alignment:
Q  31 ggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaa 77  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  25568428 ggcaatggttaaggaaactaaaattaacatgtttgcattggtttcaa 25568382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 448
Target Start/End: Original strand, 26072218 - 26072288
Alignment:
Q  378 acattgcttccatccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    |||||| || || ||||||||||||| |||| ||||||||||| | ||||| ||||||| |||||||||||    
T  26072218 acattgttttcacccaataaaagagtgagtgctagagagaatgctcaaaagagagtgttgctagcattcct 26072288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 34546747 - 34546800
Alignment:
Q  27 taagggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    ||||||||||||||||| || | ||||||| ||| |||||||||||||||||||    
T  34546747 taagggcaatggttaaggaagccaaaagtatcatttttgcattagtttcaacaa 34546800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 446
Target Start/End: Original strand, 27592492 - 27592632
Alignment:
Q  306 cactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaa 405  Q
    |||||||||||| |||||||||||||  | | || |||||| ||||  ||| | || ||| || ||  |||||||||| || |||||||||||| ||| |    
T  27592492 cactctcttattggtttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacatacattgatttcatccaataaaatagtga 27592591  T
Q  406 gtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    ||| || ||||| |||  ||||| |||||||||||| ||||    
T  27592592 gtgctaaagagagtgtgcaaaagcgagtgttactagaattc 27592632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 448
Target Start/End: Complemental strand, 32309537 - 32309478
Alignment:
Q  389 atccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||||| ||||| |||| ||||||||||||| ||||| ||||||  |||||||||||    
T  32309537 atccaataagagagtgagtgctagagagaatgttgaaaagagagtgtctctagcattcct 32309478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 35653393 - 35653342
Alignment:
Q  29 agggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    ||||||||||||||| || | ||||||| |||||||||||| ||||||||||    
T  35653393 agggcaatggttaaggaagccaaaagtaccatgtttgcattggtttcaacaa 35653342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 446
Target Start/End: Complemental strand, 36494274 - 36494223
Alignment:
Q  395 taaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattc 446  Q
    |||||||||||||||||||||||||||| ||||| || |||  |||||||||    
T  36494274 taaaagagtaagtgttagagagaatgtttaaaagagaatgtctctagcattc 36494223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 416
Target Start/End: Original strand, 13456201 - 13456315
Alignment:
Q  303 actcactctcttattagtttaaatcattgtgggtg-tatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaaga 401  Q
    ||||||||| ||||||| | |||||| ||| |||  || |||||||||||  |||||||| |||||| ||| | |||||||| || ||||| ||||||||    
T  13456201 actcactcttttattaggtgaaatcaatgtaggtcctacactttgaaaatggaacccacataaaatggtgggaaatacattgatttcatccgataaaaga 13456300  T
Q  402 gtaagtgttagagag 416  Q
    || |||  |||||||    
T  13456301 gtgagtaatagagag 13456315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 383
Target Start/End: Complemental strand, 14553665 - 14553575
Alignment:
Q  293 tctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattg 383  Q
    ||||| |||||||||||||||| || |||||| | ||||||||| || ||||| |||||| |||| ||  |||||| | | ||||||||||    
T  14553665 tctctctaatactcactctcttgttggtttaatttattgtgggtctacactttaaaaattgaaccaacgtaaaatggtaggacatacattg 14553575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 290 - 328
Target Start/End: Complemental strand, 26227043 - 26227005
Alignment:
Q  290 cactctctttaatactcactctcttattagtttaaatca 328  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  26227043 cactctctttaacaatcactctcttattagtttaaatca 26227005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 36337937 - 36338023
Alignment:
Q  313 ttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaa 399  Q
    ||||| |||||||||||||||||| || |||||| ||||| |||  ||| ||||| |||| |||||||||  || |||| |||||||    
T  36337937 ttattggtttaaatcattgtgggtctacactttggaaattgaacatacacaaaattatgggacatacattaatttcatcaaataaaa 36338023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 448
Target Start/End: Original strand, 4959406 - 4959463
Alignment:
Q  391 ccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcct 448  Q
    ||||||||||||| |||| |||||||| || | ||||| |||||||||||||| ||||    
T  4959406 ccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttactagcactcct 4959463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 368
Target Start/End: Complemental strand, 25919362 - 25919289
Alignment:
Q  295 tctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatg 368  Q
    ||||||||| ||| | | ||||| ||||||||||||||| || || |||||||||||| | |||||| ||||||    
T  25919362 tctttaatattcatttttttattggtttaaatcattgtgagtctacactttgaaaattgatcccacacaaaatg 25919289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 398
Target Start/End: Original strand, 31885878 - 31885963
Alignment:
Q  313 ttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaa 398  Q
    ||||| |||||||||||||| | | || |||||||||||| ||||  || |||||| ||| |||| ||||| || |||||||||||    
T  31885878 ttattggtttaaatcattgtagatctacactttgaaaattgaacctccagaaaatggtgggacatccattgttttcatccaataaa 31885963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 4838259 - 4838303
Alignment:
Q  36 tggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    |||||||| || | |||| ||||||||||||||||||||||||||    
T  4838259 tggttaaggaagccaaaaataacatgtttgcattagtttcaacaa 4838303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 288 - 400
Target Start/End: Complemental strand, 27970 - 27858
Alignment:
Q  288 aacactctctttaatactcactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttc 387  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| || |||||| ||||  |||||||| ||| || ||| |||||||||| |||    
T  27970 aacactctctttaatactcactctcttattggtttaaatcattgtgggtctacactttggaaatagaacccacacaaagtggtgggacatacattgattc 27871  T
Q  388 catccaataaaag 400  Q
    |||||||||||||    
T  27870 catccaataaaag 27858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 422
Target Start/End: Complemental strand, 9801 - 9688
Alignment:
Q  309 tctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtg 408  Q
    ||||||||| |||||||| |||||| || || ||||| |||||| |||||||| |||||| ||| | |||||||| || |||||||||||| ||| ||||    
T  9801 tctcttattcgtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtgagtg 9702  T
Q  409 ttagagagaatgtt 422  Q
    ||||||||| ||||    
T  9701 ttagagagagtgtt 9688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 422
Target Start/End: Complemental strand, 11347 - 11234
Alignment:
Q  309 tctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaagtg 408  Q
    ||||||||| |||||||| |||||| || || ||||| |||||| |||||||| |||||| ||| | |||||||| || |||||||||||| ||| ||||    
T  11347 tctcttattcgtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtgagtg 11248  T
Q  409 ttagagagaatgtt 422  Q
    ||||||||| ||||    
T  11247 ttagagagagtgtt 11234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 417
Target Start/End: Original strand, 26902 - 27013
Alignment:
Q  306 cactctcttattagtttaaatcattgtgggtgtatactttgaaaattaaacccacaaaaaatgatggaacatacattgcttccatccaataaaagagtaa 405  Q
    |||||| ||||| ||||||| |||| ||||| ||  ||||||||||| |||||||| ||| || |||||||||||||| ||   |||||||| ||||| |    
T  26902 cactcttttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtga 27001  T
Q  406 gtgttagagaga 417  Q
    |||||| |||||    
T  27002 gtgttaaagaga 27013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 31; Significance: 0.00000005; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 16908 - 16858
Alignment:
Q  30 gggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    |||||||||||||| || | ||||||| |||||||||||| ||||||||||    
T  16908 gggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaa 16858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 27076 - 27026
Alignment:
Q  30 gggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    |||||||||||||| || | ||||||| |||||||||||| ||||||||||    
T  27076 gggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaa 27026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 37242 - 37192
Alignment:
Q  30 gggcaatggttaagaaaactaaaagtaacatgtttgcattagtttcaacaa 80  Q
    |||||||||||||| || | ||||||| |||||||||||| ||||||||||    
T  37242 gggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaa 37192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 451
Target Start/End: Complemental strand, 204761 - 204701
Alignment:
Q  391 ccaataaaagagtaagtgttagagagaatgttaaaaagtgagtgttactagcattcctttt 451  Q
    ||||||||||||| |||  ||||||||||||| ||||  ||||||| |||||||| |||||    
T  204761 ccaataaaagagtgagtactagagagaatgttcaaaaaagagtgttgctagcattactttt 204701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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