View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16818_low_8 (Length: 487)
Name: NF16818_low_8
Description: NF16818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16818_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 446; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 7 - 472
Target Start/End: Complemental strand, 36273074 - 36272609
Alignment:
| Q |
7 |
tgagatgaagtggtttaccttggttatgatcgtattgctgcagctgcgacgcactttgattactttcttttgtaagttttccagctcaacttcatccaga |
106 |
Q |
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| T |
36273074 |
tgagaagaagtggtttaccttggttatgatcatattgctgcagctgcgacacactttgattactttcttttgtaagttttccagctcaacttcatccaga |
36272975 |
T |
|
| Q |
107 |
aggttttcagcatcagaaaagacacgtctgatccgccatagccaattatacaacttatggtcagaatatccatgcatctgctttagttcagcatctaata |
206 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36272974 |
aggttttcagcatcagaaaagacatgtctgatccgccatagccaattatacaacttatggtcagaatatccatgcatctgctttagttcagcatctaata |
36272875 |
T |
|
| Q |
207 |
atattcctttgatgtatgaaactgactttgttaaatgttgaagattgttgtatacaccgagcatcttacaagcttctacatatactggagaagcaagctg |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36272874 |
atattcctttgatgtatgaaactgactttgttaaatgttgaagatcgttgtatacaccgagcatcttacaagcttctacatatactggagaagcaagctg |
36272775 |
T |
|
| Q |
307 |
tgatacgagtgactccgccatgctaaagaggaatgatgcaaccatagccaccgttaaacaaaacaattggtagcaaagagcccaagatttattggtttgg |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36272774 |
tgatacgagtgactccgccatgctaaagaggaatgatgcaaccatagccaccgttaaacaaaacaattggtagcaaagagcccaagatttattggtttgg |
36272675 |
T |
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| Q |
407 |
ttattatgcatacaattgatattgtaaatcattggtctactttttctattattctatattattact |
472 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36272674 |
ttattatgcatacaattgatattgtaaatcattggtctactttttctattattctatattattact |
36272609 |
T |
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